####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS192_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS192_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.47 2.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 98 - 139 1.91 2.55 LCS_AVERAGE: 88.05 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 117 - 134 1.00 3.27 LCS_AVERAGE: 30.57 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 7 45 3 3 3 3 29 38 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 6 7 45 3 5 10 16 23 30 32 41 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 6 42 45 3 5 5 16 23 30 37 41 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 6 42 45 4 7 21 32 35 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 6 42 45 4 6 16 32 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 6 42 45 4 6 12 30 35 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 8 42 45 4 6 10 23 32 38 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 8 42 45 4 11 26 32 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 8 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 13 42 45 4 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 13 42 45 4 10 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 13 42 45 7 14 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 13 42 45 4 13 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 13 42 45 4 10 24 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 13 42 45 4 10 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 13 42 45 4 12 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 13 42 45 3 6 20 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 13 42 45 3 10 19 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 13 42 45 4 10 23 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 13 42 45 4 11 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 13 42 45 5 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 18 42 45 5 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 18 42 45 5 13 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 18 42 45 5 10 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 18 42 45 3 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 18 42 45 3 10 21 30 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 18 42 45 5 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 18 42 45 5 11 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 18 42 45 5 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 18 42 45 4 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 18 42 45 4 8 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 18 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 18 42 45 6 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 18 42 45 5 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 17 42 45 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 17 42 45 6 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 17 42 45 6 13 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 17 42 45 6 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 11 42 45 3 8 19 30 35 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 5 45 0 3 3 7 7 9 17 18 39 42 44 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 72.87 ( 30.57 88.05 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 15 26 33 36 40 41 42 44 44 44 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 15.56 33.33 57.78 73.33 80.00 88.89 91.11 93.33 97.78 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.22 0.72 1.07 1.32 1.43 1.66 1.72 1.82 2.13 2.13 2.13 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 GDT RMS_ALL_AT 2.61 2.98 2.82 2.69 2.69 2.61 2.61 2.56 2.50 2.50 2.50 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 3.911 0 0.720 0.877 4.621 40.476 46.667 LGA A 97 A 97 6.400 0 0.075 0.072 8.559 19.524 16.190 LGA R 98 R 98 5.523 0 0.352 1.125 11.598 25.119 14.719 LGA G 99 G 99 2.751 0 0.103 0.103 2.825 73.929 73.929 LGA W 100 W 100 2.170 0 0.323 0.240 5.721 70.833 43.129 LGA E 101 E 101 2.580 0 0.089 0.789 4.827 60.952 47.407 LGA C 102 C 102 3.381 0 0.036 0.691 5.165 46.786 40.794 LGA T 103 T 103 1.785 0 0.172 0.251 2.703 75.119 74.354 LGA K 104 K 104 0.651 0 0.076 1.431 10.638 86.071 54.074 LGA D 105 D 105 1.697 0 0.065 1.053 5.366 73.333 56.607 LGA R 106 R 106 1.482 0 0.043 1.286 11.001 83.690 44.502 LGA C 107 C 107 1.035 0 0.042 0.129 1.689 90.595 86.111 LGA G 108 G 108 1.033 0 0.321 0.321 1.211 85.952 85.952 LGA E 109 E 109 1.722 0 0.610 1.081 6.866 64.048 43.016 LGA V 110 V 110 1.496 0 0.096 0.175 3.247 83.690 71.293 LGA R 111 R 111 1.171 0 0.101 1.382 5.500 79.286 62.771 LGA N 112 N 112 2.654 0 0.140 0.772 7.070 63.214 47.679 LGA E 113 E 113 3.127 0 0.093 0.342 4.333 55.476 47.354 LGA E 114 E 114 2.852 0 0.131 0.245 5.492 62.976 45.661 LGA N 115 N 115 2.053 0 0.043 1.013 4.940 70.952 56.845 LGA A 116 A 116 1.218 0 0.040 0.051 1.746 79.286 78.000 LGA C 117 C 117 1.304 0 0.079 0.703 3.732 83.690 73.810 LGA H 118 H 118 1.305 0 0.067 1.138 3.240 73.214 73.476 LGA C 119 C 119 1.536 0 0.092 0.138 4.146 81.667 70.159 LGA S 120 S 120 1.960 0 0.023 0.632 3.472 72.976 69.127 LGA E 121 E 121 2.878 0 0.034 0.860 4.194 59.048 52.063 LGA D 122 D 122 1.046 0 0.228 1.210 3.634 79.286 73.452 LGA C 123 C 123 1.208 0 0.125 0.240 1.686 81.429 80.000 LGA L 124 L 124 0.934 0 0.197 0.188 2.200 81.786 83.869 LGA S 125 S 125 1.239 0 0.078 0.116 1.543 83.690 80.079 LGA R 126 R 126 0.431 0 0.277 1.361 4.583 92.976 78.312 LGA G 127 G 127 1.566 0 0.034 0.034 1.985 79.405 79.405 LGA D 128 D 128 0.744 0 0.067 1.184 3.266 92.857 84.345 LGA C 129 C 129 1.007 0 0.044 0.216 1.643 88.214 83.095 LGA C 130 C 130 0.874 0 0.031 0.080 2.528 85.952 78.968 LGA T 131 T 131 1.866 0 0.124 1.135 3.770 77.143 67.687 LGA N 132 N 132 0.423 0 0.284 1.256 5.498 97.619 74.762 LGA Y 133 Y 133 0.981 0 0.067 0.432 1.770 90.476 82.302 LGA Q 134 Q 134 1.264 0 0.150 0.413 3.271 79.286 72.328 LGA V 135 V 135 0.456 0 0.049 0.060 1.442 92.857 89.252 LGA V 136 V 136 0.750 0 0.100 0.111 1.084 88.214 90.544 LGA C 137 C 137 1.341 0 0.032 0.077 1.627 81.429 80.000 LGA K 138 K 138 0.796 0 0.084 0.122 3.017 83.810 76.190 LGA G 139 G 139 2.792 0 0.735 0.735 6.269 44.643 44.643 LGA E 140 E 140 9.237 0 0.147 1.093 14.537 4.048 1.799 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.466 2.467 3.634 72.601 63.927 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.82 75.000 83.582 2.190 LGA_LOCAL RMSD: 1.818 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.563 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.466 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.713592 * X + -0.358327 * Y + -0.601987 * Z + 59.680138 Y_new = 0.508592 * X + -0.325975 * Y + 0.796916 * Z + 72.894669 Z_new = -0.481789 * X + -0.874838 * Y + -0.050371 * Z + 99.463905 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.619212 0.502695 -1.628311 [DEG: 35.4782 28.8023 -93.2953 ] ZXZ: -2.494647 1.621189 -2.638199 [DEG: -142.9328 92.8873 -151.1577 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS192_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS192_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.82 83.582 2.47 REMARK ---------------------------------------------------------- MOLECULE T0543TS192_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2cqw_A 2gso_A 3ism_A 1zm8_A ATOM 728 N THR 96 19.456 82.470 20.204 1.00 0.00 N ATOM 729 CA THR 96 18.211 81.815 20.472 1.00 0.00 C ATOM 730 C THR 96 17.372 82.025 19.256 1.00 0.00 C ATOM 731 O THR 96 17.526 83.025 18.557 1.00 0.00 O ATOM 732 CB THR 96 17.495 82.367 21.720 1.00 0.00 C ATOM 733 OG1 THR 96 16.309 81.601 21.971 1.00 0.00 O ATOM 734 CG2 THR 96 17.118 83.826 21.516 1.00 0.00 C ATOM 735 N ALA 97 16.468 81.077 18.952 1.00 0.00 N ATOM 736 CA ALA 97 15.318 81.451 18.187 1.00 0.00 C ATOM 737 C ALA 97 14.630 82.555 18.915 1.00 0.00 C ATOM 738 O ALA 97 14.315 82.432 20.098 1.00 0.00 O ATOM 739 CB ALA 97 14.386 80.267 17.968 1.00 0.00 C ATOM 740 N ARG 98 14.392 83.680 18.217 1.00 0.00 N ATOM 741 CA ARG 98 13.617 84.719 18.816 1.00 0.00 C ATOM 742 C ARG 98 12.208 84.420 18.445 1.00 0.00 C ATOM 743 O ARG 98 11.355 84.199 19.304 1.00 0.00 O ATOM 744 CB ARG 98 14.051 86.123 18.420 1.00 0.00 C ATOM 745 CG ARG 98 15.476 86.485 18.808 1.00 0.00 C ATOM 746 CD ARG 98 15.846 87.897 18.529 1.00 0.00 C ATOM 747 NE ARG 98 17.160 88.283 19.015 1.00 0.00 N ATOM 748 CZ ARG 98 17.657 89.535 18.969 1.00 0.00 C ATOM 749 NH1 ARG 98 16.970 90.515 18.425 1.00 0.00 H ATOM 750 NH2 ARG 98 18.864 89.747 19.462 1.00 0.00 H ATOM 751 N GLY 99 11.941 84.391 17.126 1.00 0.00 N ATOM 752 CA GLY 99 10.906 83.539 16.633 1.00 0.00 C ATOM 753 C GLY 99 10.579 83.966 15.240 1.00 0.00 C ATOM 754 O GLY 99 11.166 84.906 14.704 1.00 0.00 O ATOM 755 N TRP 100 9.623 83.249 14.624 1.00 0.00 N ATOM 756 CA TRP 100 9.822 82.550 13.395 1.00 0.00 C ATOM 757 C TRP 100 8.971 83.318 12.437 1.00 0.00 C ATOM 758 O TRP 100 7.993 82.794 11.906 1.00 0.00 O ATOM 759 CB TRP 100 9.411 81.078 13.478 1.00 0.00 C ATOM 760 CG TRP 100 10.363 80.236 14.273 1.00 0.00 C ATOM 761 CD1 TRP 100 10.310 79.991 15.612 1.00 0.00 C ATOM 762 CD2 TRP 100 11.505 79.528 13.779 1.00 0.00 C ATOM 763 NE1 TRP 100 11.351 79.175 15.985 1.00 0.00 N ATOM 764 CE2 TRP 100 12.098 78.876 14.875 1.00 0.00 C ATOM 765 CE3 TRP 100 12.084 79.382 12.512 1.00 0.00 C ATOM 766 CZ2 TRP 100 13.236 78.095 14.748 1.00 0.00 C ATOM 767 CZ3 TRP 100 13.225 78.598 12.385 1.00 0.00 C ATOM 768 CH2 TRP 100 13.784 77.972 13.470 1.00 0.00 H ATOM 769 N GLU 101 9.330 84.589 12.189 1.00 0.00 N ATOM 770 CA GLU 101 8.766 85.269 11.063 1.00 0.00 C ATOM 771 C GLU 101 9.739 86.307 10.631 1.00 0.00 C ATOM 772 O GLU 101 10.032 87.246 11.366 1.00 0.00 O ATOM 773 CB GLU 101 7.413 85.899 11.403 1.00 0.00 C ATOM 774 CG GLU 101 6.742 86.613 10.238 1.00 0.00 C ATOM 775 CD GLU 101 5.378 87.118 10.619 1.00 0.00 C ATOM 776 OE1 GLU 101 4.932 86.809 11.698 1.00 0.00 O ATOM 777 OE2 GLU 101 4.829 87.903 9.882 1.00 0.00 O ATOM 778 N CYS 102 10.282 86.141 9.414 1.00 0.00 N ATOM 779 CA CYS 102 10.727 87.269 8.661 1.00 0.00 C ATOM 780 C CYS 102 9.610 87.656 7.744 1.00 0.00 C ATOM 781 O CYS 102 8.933 86.801 7.172 1.00 0.00 O ATOM 782 CB CYS 102 11.929 86.734 7.882 1.00 0.00 C ATOM 783 SG CYS 102 12.788 87.974 6.885 1.00 0.00 S ATOM 784 N THR 103 9.368 88.974 7.601 1.00 0.00 N ATOM 785 CA THR 103 8.048 89.487 7.817 1.00 0.00 C ATOM 786 C THR 103 7.562 90.015 6.506 1.00 0.00 C ATOM 787 O THR 103 8.024 89.600 5.443 1.00 0.00 O ATOM 788 CB THR 103 8.009 90.600 8.880 1.00 0.00 C ATOM 789 OG1 THR 103 8.717 91.750 8.398 1.00 0.00 O ATOM 790 CG2 THR 103 8.647 90.121 10.175 1.00 0.00 C ATOM 791 N LYS 104 6.628 90.981 6.556 1.00 0.00 N ATOM 792 CA LYS 104 5.668 91.145 5.506 1.00 0.00 C ATOM 793 C LYS 104 6.332 91.886 4.387 1.00 0.00 C ATOM 794 O LYS 104 5.957 91.735 3.226 1.00 0.00 O ATOM 795 CB LYS 104 4.427 91.892 5.997 1.00 0.00 C ATOM 796 CG LYS 104 3.271 90.989 6.410 1.00 0.00 C ATOM 797 CD LYS 104 3.397 90.561 7.864 1.00 0.00 C ATOM 798 CE LYS 104 2.266 89.626 8.267 1.00 0.00 C ATOM 799 NZ LYS 104 2.306 89.298 9.718 1.00 0.00 N ATOM 800 N ASP 105 7.358 92.695 4.715 1.00 0.00 N ATOM 801 CA ASP 105 8.124 93.379 3.711 1.00 0.00 C ATOM 802 C ASP 105 9.347 92.590 3.368 1.00 0.00 C ATOM 803 O ASP 105 9.980 92.834 2.341 1.00 0.00 O ATOM 804 CB ASP 105 8.514 94.781 4.182 1.00 0.00 C ATOM 805 CG ASP 105 7.334 95.719 4.409 1.00 0.00 C ATOM 806 OD1 ASP 105 6.493 95.803 3.544 1.00 0.00 O ATOM 807 OD2 ASP 105 7.200 96.220 5.499 1.00 0.00 O ATOM 808 N ARG 106 9.698 91.595 4.198 1.00 0.00 N ATOM 809 CA ARG 106 11.076 91.360 4.516 1.00 0.00 C ATOM 810 C ARG 106 11.422 89.935 4.210 1.00 0.00 C ATOM 811 O ARG 106 12.586 89.550 4.309 1.00 0.00 O ATOM 812 CB ARG 106 11.419 91.732 5.951 1.00 0.00 C ATOM 813 CG ARG 106 11.347 93.220 6.260 1.00 0.00 C ATOM 814 CD ARG 106 11.875 93.594 7.597 1.00 0.00 C ATOM 815 NE ARG 106 11.784 95.011 7.907 1.00 0.00 N ATOM 816 CZ ARG 106 12.699 95.932 7.547 1.00 0.00 C ATOM 817 NH1 ARG 106 13.791 95.587 6.902 1.00 0.00 H ATOM 818 NH2 ARG 106 12.482 97.192 7.882 1.00 0.00 H ATOM 819 N CYS 107 10.429 89.119 3.814 1.00 0.00 N ATOM 820 CA CYS 107 10.646 88.073 2.852 1.00 0.00 C ATOM 821 C CYS 107 11.462 88.617 1.713 1.00 0.00 C ATOM 822 O CYS 107 11.196 89.707 1.209 1.00 0.00 O ATOM 823 CB CYS 107 9.232 87.717 2.393 1.00 0.00 C ATOM 824 SG CYS 107 8.145 87.123 3.711 1.00 0.00 S ATOM 825 N GLY 108 12.485 87.847 1.279 1.00 0.00 N ATOM 826 CA GLY 108 13.530 88.346 0.420 1.00 0.00 C ATOM 827 C GLY 108 14.748 88.678 1.232 1.00 0.00 C ATOM 828 O GLY 108 15.826 88.143 0.975 1.00 0.00 O ATOM 829 N GLU 109 14.617 89.586 2.225 1.00 0.00 N ATOM 830 CA GLU 109 15.504 90.725 2.282 1.00 0.00 C ATOM 831 C GLU 109 16.966 90.414 2.253 1.00 0.00 C ATOM 832 O GLU 109 17.750 91.106 1.608 1.00 0.00 O ATOM 833 CB GLU 109 15.202 91.542 3.539 1.00 0.00 C ATOM 834 CG GLU 109 16.039 92.804 3.686 1.00 0.00 C ATOM 835 CD GLU 109 15.648 93.581 4.912 1.00 0.00 C ATOM 836 OE1 GLU 109 14.731 93.172 5.583 1.00 0.00 O ATOM 837 OE2 GLU 109 16.335 94.518 5.242 1.00 0.00 O ATOM 838 N VAL 110 17.349 89.369 2.994 1.00 0.00 N ATOM 839 CA VAL 110 18.633 89.185 3.582 1.00 0.00 C ATOM 840 C VAL 110 18.300 88.061 4.488 1.00 0.00 C ATOM 841 O VAL 110 17.274 88.093 5.168 1.00 0.00 O ATOM 842 CB VAL 110 19.182 90.406 4.345 1.00 0.00 C ATOM 843 CG1 VAL 110 18.397 90.626 5.630 1.00 0.00 C ATOM 844 CG2 VAL 110 20.660 90.223 4.650 1.00 0.00 C ATOM 845 N ARG 111 19.127 87.029 4.554 1.00 0.00 N ATOM 846 CA ARG 111 18.896 86.143 5.647 1.00 0.00 C ATOM 847 C ARG 111 19.551 86.747 6.845 1.00 0.00 C ATOM 848 O ARG 111 20.603 87.372 6.743 1.00 0.00 O ATOM 849 CB ARG 111 19.361 84.720 5.379 1.00 0.00 C ATOM 850 CG ARG 111 18.622 84.005 4.260 1.00 0.00 C ATOM 851 CD ARG 111 19.114 82.631 3.980 1.00 0.00 C ATOM 852 NE ARG 111 20.448 82.575 3.404 1.00 0.00 N ATOM 853 CZ ARG 111 21.209 81.464 3.345 1.00 0.00 C ATOM 854 NH1 ARG 111 20.791 80.328 3.856 1.00 0.00 H ATOM 855 NH2 ARG 111 22.401 81.554 2.780 1.00 0.00 H ATOM 856 N ASN 112 18.891 86.632 8.013 1.00 0.00 N ATOM 857 CA ASN 112 18.507 87.790 8.766 1.00 0.00 C ATOM 858 C ASN 112 18.722 87.420 10.205 1.00 0.00 C ATOM 859 O ASN 112 17.820 86.916 10.875 1.00 0.00 O ATOM 860 CB ASN 112 17.077 88.223 8.503 1.00 0.00 C ATOM 861 CG ASN 112 16.726 89.554 9.110 1.00 0.00 C ATOM 862 OD1 ASN 112 17.427 90.060 9.993 1.00 0.00 O ATOM 863 ND2 ASN 112 15.602 90.083 8.699 1.00 0.00 N ATOM 864 N GLU 113 19.942 87.670 10.713 1.00 0.00 N ATOM 865 CA GLU 113 20.724 86.657 11.366 1.00 0.00 C ATOM 866 C GLU 113 20.169 86.389 12.729 1.00 0.00 C ATOM 867 O GLU 113 20.212 85.259 13.215 1.00 0.00 O ATOM 868 CB GLU 113 22.193 87.075 11.460 1.00 0.00 C ATOM 869 CG GLU 113 22.932 87.081 10.130 1.00 0.00 C ATOM 870 CD GLU 113 22.890 85.728 9.476 1.00 0.00 C ATOM 871 OE1 GLU 113 23.211 84.764 10.128 1.00 0.00 O ATOM 872 OE2 GLU 113 22.433 85.644 8.361 1.00 0.00 O ATOM 873 N GLU 114 19.655 87.440 13.393 1.00 0.00 N ATOM 874 CA GLU 114 19.060 87.314 14.693 1.00 0.00 C ATOM 875 C GLU 114 17.721 86.633 14.606 1.00 0.00 C ATOM 876 O GLU 114 17.324 85.933 15.536 1.00 0.00 O ATOM 877 CB GLU 114 18.915 88.688 15.350 1.00 0.00 C ATOM 878 CG GLU 114 20.233 89.340 15.742 1.00 0.00 C ATOM 879 CD GLU 114 20.022 90.742 16.244 1.00 0.00 C ATOM 880 OE1 GLU 114 18.905 91.199 16.219 1.00 0.00 O ATOM 881 OE2 GLU 114 20.955 91.314 16.755 1.00 0.00 O ATOM 882 N ASN 115 16.995 86.803 13.480 1.00 0.00 N ATOM 883 CA ASN 115 15.666 86.260 13.367 1.00 0.00 C ATOM 884 C ASN 115 15.714 84.767 13.223 1.00 0.00 C ATOM 885 O ASN 115 16.555 84.213 12.519 1.00 0.00 O ATOM 886 CB ASN 115 14.906 86.876 12.206 1.00 0.00 C ATOM 887 CG ASN 115 13.443 86.527 12.186 1.00 0.00 C ATOM 888 OD1 ASN 115 13.062 85.380 11.925 1.00 0.00 O ATOM 889 ND2 ASN 115 12.622 87.526 12.381 1.00 0.00 N ATOM 890 N ALA 116 14.787 84.076 13.919 1.00 0.00 N ATOM 891 CA ALA 116 14.773 82.643 14.034 1.00 0.00 C ATOM 892 C ALA 116 14.627 82.042 12.676 1.00 0.00 C ATOM 893 O ALA 116 15.263 81.044 12.346 1.00 0.00 O ATOM 894 CB ALA 116 13.656 82.178 14.956 1.00 0.00 C ATOM 895 N CYS 117 13.754 82.650 11.861 1.00 0.00 N ATOM 896 CA CYS 117 13.444 82.153 10.559 1.00 0.00 C ATOM 897 C CYS 117 14.228 82.949 9.556 1.00 0.00 C ATOM 898 O CYS 117 14.560 84.096 9.836 1.00 0.00 O ATOM 899 CB CYS 117 11.976 82.406 10.290 1.00 0.00 C ATOM 900 SG CYS 117 11.576 81.902 8.634 1.00 0.00 S ATOM 901 N HIS 118 14.533 82.375 8.361 1.00 0.00 N ATOM 902 CA HIS 118 15.230 83.122 7.345 1.00 0.00 C ATOM 903 C HIS 118 14.544 83.032 6.003 1.00 0.00 C ATOM 904 O HIS 118 13.994 82.005 5.610 1.00 0.00 O ATOM 905 CB HIS 118 16.676 82.633 7.222 1.00 0.00 C ATOM 906 CG HIS 118 17.457 82.739 8.495 1.00 0.00 C ATOM 907 ND1 HIS 118 18.042 83.917 8.912 1.00 0.00 N ATOM 908 CD2 HIS 118 17.751 81.817 9.440 1.00 0.00 C ATOM 909 CE1 HIS 118 18.661 83.713 10.062 1.00 0.00 C ATOM 910 NE2 HIS 118 18.500 82.448 10.403 1.00 0.00 N ATOM 911 N CYS 119 14.525 84.186 5.305 1.00 0.00 N ATOM 912 CA CYS 119 13.417 84.893 4.718 1.00 0.00 C ATOM 913 C CYS 119 13.033 84.416 3.342 1.00 0.00 C ATOM 914 O CYS 119 12.729 85.235 2.471 1.00 0.00 O ATOM 915 CB CYS 119 13.959 86.321 4.645 1.00 0.00 C ATOM 916 SG CYS 119 14.447 87.020 6.241 1.00 0.00 S ATOM 917 N SER 120 13.167 83.104 3.056 1.00 0.00 N ATOM 918 CA SER 120 13.700 82.662 1.791 1.00 0.00 C ATOM 919 C SER 120 13.309 81.241 1.483 1.00 0.00 C ATOM 920 O SER 120 13.054 80.429 2.369 1.00 0.00 O ATOM 921 CB SER 120 15.209 82.803 1.788 1.00 0.00 C ATOM 922 OG SER 120 15.782 82.297 0.613 1.00 0.00 O ATOM 923 N GLU 121 13.287 80.902 0.177 1.00 0.00 N ATOM 924 CA GLU 121 13.050 79.571 -0.320 1.00 0.00 C ATOM 925 C GLU 121 14.232 78.697 -0.034 1.00 0.00 C ATOM 926 O GLU 121 14.159 77.474 -0.148 1.00 0.00 O ATOM 927 CB GLU 121 12.758 79.592 -1.822 1.00 0.00 C ATOM 928 CG GLU 121 11.425 80.226 -2.195 1.00 0.00 C ATOM 929 CD GLU 121 11.240 80.273 -3.685 1.00 0.00 C ATOM 930 OE1 GLU 121 12.144 79.890 -4.389 1.00 0.00 O ATOM 931 OE2 GLU 121 10.157 80.586 -4.120 1.00 0.00 O ATOM 932 N ASP 122 15.351 79.308 0.386 1.00 0.00 N ATOM 933 CA ASP 122 16.427 78.599 1.013 1.00 0.00 C ATOM 934 C ASP 122 15.872 77.729 2.090 1.00 0.00 C ATOM 935 O ASP 122 16.319 76.596 2.264 1.00 0.00 O ATOM 936 CB ASP 122 17.468 79.566 1.584 1.00 0.00 C ATOM 937 CG ASP 122 18.335 80.248 0.536 1.00 0.00 C ATOM 938 OD1 ASP 122 18.344 79.797 -0.586 1.00 0.00 O ATOM 939 OD2 ASP 122 18.856 81.301 0.818 1.00 0.00 O ATOM 940 N CYS 123 14.868 78.223 2.836 1.00 0.00 N ATOM 941 CA CYS 123 14.466 77.580 4.049 1.00 0.00 C ATOM 942 C CYS 123 13.742 76.341 3.665 1.00 0.00 C ATOM 943 O CYS 123 13.520 75.472 4.498 1.00 0.00 O ATOM 944 CB CYS 123 13.496 78.405 4.922 1.00 0.00 C ATOM 945 SG CYS 123 11.764 78.328 4.369 1.00 0.00 S ATOM 946 N LEU 124 13.348 76.217 2.389 1.00 0.00 N ATOM 947 CA LEU 124 12.524 75.104 2.029 1.00 0.00 C ATOM 948 C LEU 124 13.412 73.927 1.741 1.00 0.00 C ATOM 949 O LEU 124 12.932 72.807 1.571 1.00 0.00 O ATOM 950 CB LEU 124 11.647 75.443 0.817 1.00 0.00 C ATOM 951 CG LEU 124 10.658 76.596 1.030 1.00 0.00 C ATOM 952 CD1 LEU 124 9.987 76.959 -0.288 1.00 0.00 C ATOM 953 CD2 LEU 124 9.622 76.192 2.069 1.00 0.00 C ATOM 954 N SER 125 14.740 74.148 1.683 1.00 0.00 N ATOM 955 CA SER 125 15.664 73.050 1.675 1.00 0.00 C ATOM 956 C SER 125 16.337 72.917 3.009 1.00 0.00 C ATOM 957 O SER 125 16.780 71.829 3.380 1.00 0.00 O ATOM 958 CB SER 125 16.693 73.236 0.576 1.00 0.00 C ATOM 959 OG SER 125 17.476 74.380 0.778 1.00 0.00 O ATOM 960 N ARG 126 16.434 74.032 3.765 1.00 0.00 N ATOM 961 CA ARG 126 17.136 74.038 5.020 1.00 0.00 C ATOM 962 C ARG 126 16.297 73.463 6.122 1.00 0.00 C ATOM 963 O ARG 126 16.653 72.432 6.691 1.00 0.00 O ATOM 964 CB ARG 126 17.653 75.421 5.383 1.00 0.00 C ATOM 965 CG ARG 126 18.807 75.917 4.527 1.00 0.00 C ATOM 966 CD ARG 126 19.196 77.329 4.781 1.00 0.00 C ATOM 967 NE ARG 126 19.580 77.610 6.154 1.00 0.00 N ATOM 968 CZ ARG 126 20.817 77.426 6.656 1.00 0.00 C ATOM 969 NH1 ARG 126 21.780 76.925 5.915 1.00 0.00 H ATOM 970 NH2 ARG 126 21.029 77.739 7.922 1.00 0.00 H ATOM 971 N GLY 127 15.131 74.080 6.412 1.00 0.00 N ATOM 972 CA GLY 127 14.418 73.837 7.641 1.00 0.00 C ATOM 973 C GLY 127 14.589 74.988 8.606 1.00 0.00 C ATOM 974 O GLY 127 14.609 74.782 9.818 1.00 0.00 O ATOM 975 N ASP 128 14.781 76.214 8.075 1.00 0.00 N ATOM 976 CA ASP 128 14.723 77.500 8.734 1.00 0.00 C ATOM 977 C ASP 128 13.477 78.312 8.441 1.00 0.00 C ATOM 978 O ASP 128 13.546 79.538 8.399 1.00 0.00 O ATOM 979 CB ASP 128 15.959 78.320 8.358 1.00 0.00 C ATOM 980 CG ASP 128 17.234 77.906 9.081 1.00 0.00 C ATOM 981 OD1 ASP 128 17.152 77.089 9.967 1.00 0.00 O ATOM 982 OD2 ASP 128 18.292 78.285 8.641 1.00 0.00 O ATOM 983 N CYS 129 12.323 77.676 8.163 1.00 0.00 N ATOM 984 CA CYS 129 11.140 78.352 7.679 1.00 0.00 C ATOM 985 C CYS 129 10.297 78.937 8.780 1.00 0.00 C ATOM 986 O CYS 129 10.288 78.489 9.926 1.00 0.00 O ATOM 987 CB CYS 129 10.230 77.427 6.852 1.00 0.00 C ATOM 988 SG CYS 129 11.035 76.729 5.374 1.00 0.00 S ATOM 989 N CYS 130 9.523 79.977 8.408 1.00 0.00 N ATOM 990 CA CYS 130 8.778 80.794 9.327 1.00 0.00 C ATOM 991 C CYS 130 7.517 80.072 9.633 1.00 0.00 C ATOM 992 O CYS 130 7.051 79.263 8.836 1.00 0.00 O ATOM 993 CB CYS 130 8.502 82.077 8.541 1.00 0.00 C ATOM 994 SG CYS 130 9.980 83.027 8.117 1.00 0.00 S ATOM 995 N THR 131 6.931 80.362 10.809 1.00 0.00 N ATOM 996 CA THR 131 5.818 79.597 11.277 1.00 0.00 C ATOM 997 C THR 131 4.711 79.745 10.283 1.00 0.00 C ATOM 998 O THR 131 4.013 78.777 9.983 1.00 0.00 O ATOM 999 CB THR 131 5.338 80.050 12.668 1.00 0.00 C ATOM 1000 OG1 THR 131 6.380 79.834 13.629 1.00 0.00 O ATOM 1001 CG2 THR 131 4.101 79.269 13.085 1.00 0.00 C ATOM 1002 N ASN 132 4.524 80.966 9.742 1.00 0.00 N ATOM 1003 CA ASN 132 3.642 81.125 8.622 1.00 0.00 C ATOM 1004 C ASN 132 4.423 81.654 7.456 1.00 0.00 C ATOM 1005 O ASN 132 4.124 82.727 6.932 1.00 0.00 O ATOM 1006 CB ASN 132 2.471 82.035 8.943 1.00 0.00 C ATOM 1007 CG ASN 132 1.616 81.544 10.079 1.00 0.00 C ATOM 1008 OD1 ASN 132 0.921 80.527 9.966 1.00 0.00 O ATOM 1009 ND2 ASN 132 1.601 82.304 11.144 1.00 0.00 N ATOM 1010 N TYR 133 5.445 80.899 7.015 1.00 0.00 N ATOM 1011 CA TYR 133 6.137 81.184 5.790 1.00 0.00 C ATOM 1012 C TYR 133 5.121 81.330 4.705 1.00 0.00 C ATOM 1013 O TYR 133 5.100 82.323 3.979 1.00 0.00 O ATOM 1014 CB TYR 133 7.143 80.083 5.447 1.00 0.00 C ATOM 1015 CG TYR 133 7.932 80.345 4.184 1.00 0.00 C ATOM 1016 CD1 TYR 133 9.067 81.144 4.205 1.00 0.00 C ATOM 1017 CD2 TYR 133 7.541 79.793 2.973 1.00 0.00 C ATOM 1018 CE1 TYR 133 9.790 81.388 3.054 1.00 0.00 C ATOM 1019 CE2 TYR 133 8.257 80.029 1.817 1.00 0.00 C ATOM 1020 CZ TYR 133 9.382 80.827 1.861 1.00 0.00 C ATOM 1021 OH TYR 133 10.100 81.065 0.712 1.00 0.00 H ATOM 1022 N GLN 134 4.254 80.309 4.573 1.00 0.00 N ATOM 1023 CA GLN 134 3.437 80.134 3.412 1.00 0.00 C ATOM 1024 C GLN 134 2.196 80.964 3.520 1.00 0.00 C ATOM 1025 O GLN 134 1.403 81.033 2.586 1.00 0.00 O ATOM 1026 CB GLN 134 3.064 78.660 3.227 1.00 0.00 C ATOM 1027 CG GLN 134 4.246 77.751 2.938 1.00 0.00 C ATOM 1028 CD GLN 134 3.843 76.293 2.833 1.00 0.00 C ATOM 1029 OE1 GLN 134 2.659 75.953 2.915 1.00 0.00 O ATOM 1030 NE2 GLN 134 4.827 75.419 2.654 1.00 0.00 N ATOM 1031 N VAL 135 1.971 81.631 4.662 1.00 0.00 N ATOM 1032 CA VAL 135 1.131 82.790 4.581 1.00 0.00 C ATOM 1033 C VAL 135 1.928 83.944 4.062 1.00 0.00 C ATOM 1034 O VAL 135 1.531 84.584 3.090 1.00 0.00 O ATOM 1035 CB VAL 135 0.519 83.157 5.946 1.00 0.00 C ATOM 1036 CG1 VAL 135 -0.260 84.461 5.847 1.00 0.00 C ATOM 1037 CG2 VAL 135 -0.381 82.037 6.446 1.00 0.00 C ATOM 1038 N VAL 136 3.059 84.271 4.714 1.00 0.00 N ATOM 1039 CA VAL 136 3.570 85.607 4.608 1.00 0.00 C ATOM 1040 C VAL 136 4.419 85.799 3.382 1.00 0.00 C ATOM 1041 O VAL 136 4.153 86.684 2.573 1.00 0.00 O ATOM 1042 CB VAL 136 4.396 85.984 5.851 1.00 0.00 C ATOM 1043 CG1 VAL 136 5.019 87.361 5.678 1.00 0.00 C ATOM 1044 CG2 VAL 136 3.528 85.947 7.099 1.00 0.00 C ATOM 1045 N CYS 137 5.486 84.985 3.223 1.00 0.00 N ATOM 1046 CA CYS 137 6.397 85.177 2.124 1.00 0.00 C ATOM 1047 C CYS 137 5.854 84.632 0.832 1.00 0.00 C ATOM 1048 O CYS 137 6.316 84.980 -0.254 1.00 0.00 O ATOM 1049 CB CYS 137 7.623 84.378 2.566 1.00 0.00 C ATOM 1050 SG CYS 137 8.598 85.162 3.872 1.00 0.00 S ATOM 1051 N LYS 138 4.806 83.796 0.947 1.00 0.00 N ATOM 1052 CA LYS 138 3.942 83.331 -0.105 1.00 0.00 C ATOM 1053 C LYS 138 2.609 83.989 -0.009 1.00 0.00 C ATOM 1054 O LYS 138 1.618 83.400 -0.422 1.00 0.00 O ATOM 1055 CB LYS 138 3.783 81.811 -0.051 1.00 0.00 C ATOM 1056 CG LYS 138 5.068 81.034 -0.306 1.00 0.00 C ATOM 1057 CD LYS 138 5.620 81.320 -1.694 1.00 0.00 C ATOM 1058 CE LYS 138 6.946 80.609 -1.920 1.00 0.00 C ATOM 1059 NZ LYS 138 7.528 80.926 -3.254 1.00 0.00 N ATOM 1060 N GLY 139 2.527 85.188 0.599 1.00 0.00 N ATOM 1061 CA GLY 139 1.355 86.020 0.520 1.00 0.00 C ATOM 1062 C GLY 139 1.511 87.016 -0.586 1.00 0.00 C ATOM 1063 O GLY 139 2.338 86.861 -1.484 1.00 0.00 O ATOM 1064 N GLU 140 0.674 88.074 -0.558 1.00 0.00 N ATOM 1065 CA GLU 140 0.995 89.230 -1.337 1.00 0.00 C ATOM 1066 C GLU 140 0.315 90.426 -0.770 1.00 0.00 C ATOM 1067 O GLU 140 -0.866 90.389 -0.424 1.00 0.00 O ATOM 1068 CB GLU 140 0.595 89.034 -2.801 1.00 0.00 C ATOM 1069 CG GLU 140 0.983 90.186 -3.718 1.00 0.00 C ATOM 1070 CD GLU 140 0.595 89.902 -5.143 1.00 0.00 C ATOM 1071 OE1 GLU 140 0.070 88.845 -5.397 1.00 0.00 O ATOM 1072 OE2 GLU 140 0.721 90.786 -5.958 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 50.55 69.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 54.27 64.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 40.30 80.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.88 59.0 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 76.87 55.6 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 66.81 65.4 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 86.28 46.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.83 69.6 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 45.53 83.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 51.85 75.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 72.30 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.64 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 63.99 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 59.01 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 73.46 66.7 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.72 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 74.72 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 61.95 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 95.26 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.47 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.47 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0548 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.70 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.77 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.59 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.81 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.98 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.62 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 4.75 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.75 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.31 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.66 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.79 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.34 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.023 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 2.182 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 1.630 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.115 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.257 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 1.773 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.811 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 3.946 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 3.890 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 3.643 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.875 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.968 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 2.663 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 27 36 43 45 45 45 DISTCA CA (P) 22.22 60.00 80.00 95.56 100.00 45 DISTCA CA (RMS) 0.77 1.26 1.58 2.04 2.47 DISTCA ALL (N) 54 162 222 299 337 345 345 DISTALL ALL (P) 15.65 46.96 64.35 86.67 97.68 345 DISTALL ALL (RMS) 0.75 1.31 1.72 2.51 3.25 DISTALL END of the results output