####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS166_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS166_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.17 2.17 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.96 2.19 LCS_AVERAGE: 97.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.93 2.26 LCS_AVERAGE: 43.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 44 45 3 3 3 3 4 4 8 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 44 45 3 3 4 5 9 22 37 41 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 44 45 3 3 4 4 12 16 33 39 42 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 13 44 45 11 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 13 44 45 12 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 13 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 13 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 13 44 45 9 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 13 44 45 7 26 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 13 44 45 5 21 31 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 13 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 13 44 45 11 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 13 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 13 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 13 44 45 7 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 13 44 45 3 5 6 20 33 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 12 44 45 4 20 34 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 7 44 45 3 6 13 19 28 34 39 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 44 45 5 16 34 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 44 45 5 19 34 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 44 45 8 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 44 45 6 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 44 45 5 22 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 44 45 5 26 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 44 45 4 26 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 44 45 6 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 44 45 10 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 44 45 9 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 44 45 14 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 44 45 16 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 44 45 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 44 45 11 27 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 44 45 4 27 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 43 45 3 3 3 3 4 5 8 37 39 41 44 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 80.33 ( 43.26 97.73 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 28 35 39 39 39 40 42 43 44 44 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 37.78 62.22 77.78 86.67 86.67 86.67 88.89 93.33 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.62 0.80 1.04 1.04 1.04 1.19 1.58 1.77 1.96 1.96 2.17 2.17 2.17 2.17 2.17 2.17 2.17 2.17 2.17 GDT RMS_ALL_AT 2.40 2.35 2.37 2.26 2.26 2.26 2.24 2.24 2.21 2.19 2.19 2.17 2.17 2.17 2.17 2.17 2.17 2.17 2.17 2.17 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 113 E 113 # possible swapping detected: E 121 E 121 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 4.603 0 0.712 0.698 5.620 27.619 31.769 LGA A 97 A 97 5.584 0 0.215 0.216 6.084 23.929 22.571 LGA R 98 R 98 6.339 0 0.601 1.119 18.184 26.786 10.000 LGA G 99 G 99 0.564 0 0.440 0.440 2.252 84.048 84.048 LGA W 100 W 100 0.555 0 0.092 0.392 2.793 92.857 76.463 LGA E 101 E 101 0.585 0 0.136 0.417 2.161 88.452 84.709 LGA C 102 C 102 0.831 0 0.062 0.080 1.381 88.214 85.952 LGA T 103 T 103 1.256 0 0.025 0.933 3.743 81.429 77.415 LGA K 104 K 104 1.311 0 0.043 1.314 5.185 77.143 69.894 LGA D 105 D 105 2.079 0 0.138 0.879 5.063 68.810 54.345 LGA R 106 R 106 0.653 0 0.160 0.967 3.014 88.214 82.035 LGA C 107 C 107 1.327 0 0.036 0.146 1.638 83.690 81.508 LGA G 108 G 108 0.851 0 0.176 0.176 1.061 90.595 90.595 LGA E 109 E 109 1.066 0 0.042 0.986 3.674 83.690 78.466 LGA V 110 V 110 1.040 0 0.670 1.456 4.159 73.571 69.388 LGA R 111 R 111 3.372 0 0.077 1.053 12.189 55.714 23.896 LGA N 112 N 112 1.352 0 0.027 1.127 5.737 75.119 59.167 LGA E 113 E 113 4.738 0 0.236 1.101 12.628 43.690 21.217 LGA E 114 E 114 1.752 0 0.561 0.762 5.995 66.905 54.762 LGA N 115 N 115 1.647 0 0.058 1.113 4.882 79.405 69.940 LGA A 116 A 116 1.449 0 0.029 0.058 2.095 81.429 78.095 LGA C 117 C 117 0.715 0 0.041 0.310 2.090 88.214 84.683 LGA H 118 H 118 0.870 0 0.117 1.094 2.517 88.214 78.429 LGA C 119 C 119 0.708 0 0.064 0.131 1.271 92.857 89.048 LGA S 120 S 120 0.366 0 0.026 0.132 0.896 95.238 93.651 LGA E 121 E 121 0.903 0 0.126 1.304 4.994 88.214 67.037 LGA D 122 D 122 0.443 0 0.202 1.073 4.481 90.595 75.536 LGA C 123 C 123 0.651 0 0.068 0.125 1.490 90.595 90.556 LGA L 124 L 124 1.781 0 0.059 0.986 4.166 71.071 63.512 LGA S 125 S 125 1.976 0 0.233 0.555 3.358 65.119 63.889 LGA R 126 R 126 1.925 0 0.155 1.214 7.496 68.929 51.472 LGA G 127 G 127 1.208 0 0.072 0.072 1.239 81.429 81.429 LGA D 128 D 128 1.247 0 0.131 1.020 2.626 81.429 74.167 LGA C 129 C 129 1.144 0 0.051 0.134 1.159 83.690 82.937 LGA C 130 C 130 0.606 0 0.034 0.381 0.971 92.857 92.063 LGA T 131 T 131 0.828 0 0.151 1.100 2.957 95.238 84.626 LGA N 132 N 132 0.406 0 0.204 0.398 1.298 90.595 92.976 LGA Y 133 Y 133 0.467 0 0.080 0.550 1.590 100.000 88.413 LGA Q 134 Q 134 0.784 0 0.061 0.626 4.045 90.476 67.831 LGA V 135 V 135 0.878 0 0.037 1.013 3.039 90.476 79.932 LGA V 136 V 136 0.339 0 0.096 1.101 2.500 95.238 87.279 LGA C 137 C 137 0.475 0 0.179 0.212 1.294 92.976 90.635 LGA K 138 K 138 1.185 0 0.089 0.965 6.687 83.690 56.508 LGA G 139 G 139 1.644 0 0.745 0.745 4.300 60.357 60.357 LGA E 140 E 140 7.051 0 0.251 1.447 13.869 11.786 5.714 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.169 2.194 3.836 77.124 69.087 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.58 85.556 90.777 2.500 LGA_LOCAL RMSD: 1.580 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.241 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.169 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.845044 * X + 0.196026 * Y + -0.497468 * Z + -9.729285 Y_new = -0.532335 * X + 0.395784 * Y + -0.748314 * Z + 113.926720 Z_new = 0.050200 * X + 0.897178 * Y + 0.438806 * Z + 40.721970 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.562151 -0.050221 1.115910 [DEG: -32.2089 -2.8775 63.9369 ] ZXZ: -0.586699 1.116527 0.055895 [DEG: -33.6154 63.9723 3.2026 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS166_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS166_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.58 90.777 2.17 REMARK ---------------------------------------------------------- MOLECULE T0543TS166_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsoA ATOM 728 N THR 96 18.396 87.702 22.943 1.00 0.00 N ATOM 729 CA THR 96 17.335 86.752 23.032 1.00 0.00 C ATOM 730 C THR 96 16.074 87.466 22.673 1.00 0.00 C ATOM 731 O THR 96 16.015 88.693 22.650 1.00 0.00 O ATOM 732 CB THR 96 17.176 86.208 24.429 1.00 0.00 C ATOM 733 OG1 THR 96 18.395 85.623 24.862 1.00 0.00 O ATOM 734 CG2 THR 96 16.066 85.146 24.450 1.00 0.00 C ATOM 735 N ALA 97 15.044 86.685 22.318 1.00 0.00 N ATOM 736 CA ALA 97 13.743 87.177 22.001 1.00 0.00 C ATOM 737 C ALA 97 13.179 86.105 21.147 1.00 0.00 C ATOM 738 O ALA 97 13.915 85.267 20.630 1.00 0.00 O ATOM 739 CB ALA 97 13.726 88.464 21.158 1.00 0.00 C ATOM 740 N ARG 98 11.853 86.071 20.976 1.00 0.00 N ATOM 741 CA ARG 98 11.394 85.039 20.108 1.00 0.00 C ATOM 742 C ARG 98 10.764 85.698 18.934 1.00 0.00 C ATOM 743 O ARG 98 9.891 86.554 19.081 1.00 0.00 O ATOM 744 CB ARG 98 10.370 84.083 20.747 1.00 0.00 C ATOM 745 CG ARG 98 10.995 83.180 21.812 1.00 0.00 C ATOM 746 CD ARG 98 10.047 82.107 22.342 1.00 0.00 C ATOM 747 NE ARG 98 8.946 82.805 23.060 1.00 0.00 N ATOM 748 CZ ARG 98 9.087 83.125 24.379 1.00 0.00 C ATOM 749 NH1 ARG 98 10.243 82.818 25.035 1.00 0.00 H ATOM 750 NH2 ARG 98 8.075 83.768 25.034 1.00 0.00 H ATOM 751 N GLY 99 11.223 85.324 17.726 1.00 0.00 N ATOM 752 CA GLY 99 10.637 85.883 16.545 1.00 0.00 C ATOM 753 C GLY 99 10.372 84.745 15.608 1.00 0.00 C ATOM 754 O GLY 99 11.076 84.535 14.623 1.00 0.00 O ATOM 755 N TRP 100 9.297 84.002 15.907 1.00 0.00 N ATOM 756 CA TRP 100 8.852 82.843 15.192 1.00 0.00 C ATOM 757 C TRP 100 8.231 83.198 13.884 1.00 0.00 C ATOM 758 O TRP 100 7.901 82.300 13.117 1.00 0.00 O ATOM 759 CB TRP 100 7.871 81.966 15.982 1.00 0.00 C ATOM 760 CG TRP 100 8.558 81.253 17.117 1.00 0.00 C ATOM 761 CD1 TRP 100 8.341 81.327 18.461 1.00 0.00 C ATOM 762 CD2 TRP 100 9.668 80.360 16.930 1.00 0.00 C ATOM 763 NE1 TRP 100 9.244 80.524 19.124 1.00 0.00 N ATOM 764 CE2 TRP 100 10.068 79.929 18.194 1.00 0.00 C ATOM 765 CE3 TRP 100 10.306 79.938 15.796 1.00 0.00 C ATOM 766 CZ2 TRP 100 11.114 79.062 18.344 1.00 0.00 C ATOM 767 CZ3 TRP 100 11.359 79.065 15.951 1.00 0.00 C ATOM 768 CH2 TRP 100 11.756 78.635 17.201 1.00 0.00 H ATOM 769 N GLU 101 7.947 84.488 13.624 1.00 0.00 N ATOM 770 CA GLU 101 7.253 84.809 12.404 1.00 0.00 C ATOM 771 C GLU 101 8.127 85.575 11.451 1.00 0.00 C ATOM 772 O GLU 101 9.249 85.960 11.777 1.00 0.00 O ATOM 773 CB GLU 101 5.988 85.651 12.638 1.00 0.00 C ATOM 774 CG GLU 101 4.865 84.884 13.344 1.00 0.00 C ATOM 775 CD GLU 101 3.683 85.828 13.511 1.00 0.00 C ATOM 776 OE1 GLU 101 3.926 87.028 13.807 1.00 0.00 O ATOM 777 OE2 GLU 101 2.523 85.363 13.347 1.00 0.00 O ATOM 778 N CYS 102 7.629 85.769 10.206 1.00 0.00 N ATOM 779 CA CYS 102 8.328 86.530 9.203 1.00 0.00 C ATOM 780 C CYS 102 7.457 87.670 8.757 1.00 0.00 C ATOM 781 O CYS 102 6.256 87.703 9.022 1.00 0.00 O ATOM 782 CB CYS 102 8.733 85.744 7.933 1.00 0.00 C ATOM 783 SG CYS 102 10.242 84.741 8.127 1.00 0.00 S ATOM 784 N THR 103 8.073 88.654 8.067 1.00 0.00 N ATOM 785 CA THR 103 7.363 89.808 7.592 1.00 0.00 C ATOM 786 C THR 103 7.413 89.773 6.098 1.00 0.00 C ATOM 787 O THR 103 8.313 89.179 5.508 1.00 0.00 O ATOM 788 CB THR 103 7.977 91.108 8.029 1.00 0.00 C ATOM 789 OG1 THR 103 8.024 91.175 9.446 1.00 0.00 O ATOM 790 CG2 THR 103 7.138 92.272 7.476 1.00 0.00 C ATOM 791 N LYS 104 6.445 90.440 5.441 1.00 0.00 N ATOM 792 CA LYS 104 6.355 90.385 4.012 1.00 0.00 C ATOM 793 C LYS 104 7.632 90.875 3.405 1.00 0.00 C ATOM 794 O LYS 104 8.127 90.280 2.449 1.00 0.00 O ATOM 795 CB LYS 104 5.170 91.192 3.456 1.00 0.00 C ATOM 796 CG LYS 104 5.088 92.624 3.980 1.00 0.00 C ATOM 797 CD LYS 104 4.045 93.473 3.253 1.00 0.00 C ATOM 798 CE LYS 104 3.664 94.735 4.026 1.00 0.00 C ATOM 799 NZ LYS 104 3.017 94.349 5.302 1.00 0.00 N ATOM 800 N ASP 105 8.214 91.958 3.947 1.00 0.00 N ATOM 801 CA ASP 105 9.438 92.474 3.397 1.00 0.00 C ATOM 802 C ASP 105 10.527 91.467 3.601 1.00 0.00 C ATOM 803 O ASP 105 11.376 91.263 2.736 1.00 0.00 O ATOM 804 CB ASP 105 9.905 93.775 4.070 1.00 0.00 C ATOM 805 CG ASP 105 8.918 94.879 3.718 1.00 0.00 C ATOM 806 OD1 ASP 105 7.815 94.547 3.207 1.00 0.00 O ATOM 807 OD2 ASP 105 9.257 96.070 3.949 1.00 0.00 O ATOM 808 N ARG 106 10.500 90.777 4.751 1.00 0.00 N ATOM 809 CA ARG 106 11.535 89.864 5.127 1.00 0.00 C ATOM 810 C ARG 106 11.643 88.812 4.072 1.00 0.00 C ATOM 811 O ARG 106 12.741 88.346 3.765 1.00 0.00 O ATOM 812 CB ARG 106 11.229 89.193 6.476 1.00 0.00 C ATOM 813 CG ARG 106 11.163 90.210 7.618 1.00 0.00 C ATOM 814 CD ARG 106 12.129 89.930 8.768 1.00 0.00 C ATOM 815 NE ARG 106 11.531 88.837 9.586 1.00 0.00 N ATOM 816 CZ ARG 106 12.255 88.262 10.590 1.00 0.00 C ATOM 817 NH1 ARG 106 13.549 88.640 10.800 1.00 0.00 H ATOM 818 NH2 ARG 106 11.684 87.305 11.380 1.00 0.00 H ATOM 819 N CYS 107 10.502 88.429 3.477 1.00 0.00 N ATOM 820 CA CYS 107 10.500 87.400 2.477 1.00 0.00 C ATOM 821 C CYS 107 11.469 87.789 1.402 1.00 0.00 C ATOM 822 O CYS 107 11.465 88.921 0.927 1.00 0.00 O ATOM 823 CB CYS 107 9.118 87.226 1.816 1.00 0.00 C ATOM 824 SG CYS 107 7.797 86.943 3.032 1.00 0.00 S ATOM 825 N GLY 108 12.339 86.836 1.000 1.00 0.00 N ATOM 826 CA GLY 108 13.299 87.080 -0.044 1.00 0.00 C ATOM 827 C GLY 108 14.447 87.898 0.477 1.00 0.00 C ATOM 828 O GLY 108 14.963 88.757 -0.238 1.00 0.00 O ATOM 829 N GLU 109 14.883 87.656 1.733 1.00 0.00 N ATOM 830 CA GLU 109 15.963 88.433 2.293 1.00 0.00 C ATOM 831 C GLU 109 17.227 87.619 2.367 1.00 0.00 C ATOM 832 O GLU 109 17.211 86.417 2.625 1.00 0.00 O ATOM 833 CB GLU 109 15.648 88.978 3.699 1.00 0.00 C ATOM 834 CG GLU 109 15.289 87.895 4.717 1.00 0.00 C ATOM 835 CD GLU 109 16.580 87.279 5.228 1.00 0.00 C ATOM 836 OE1 GLU 109 17.633 87.965 5.137 1.00 0.00 O ATOM 837 OE2 GLU 109 16.529 86.122 5.725 1.00 0.00 O ATOM 838 N VAL 110 18.357 88.279 2.038 1.00 0.00 N ATOM 839 CA VAL 110 19.692 87.745 2.022 1.00 0.00 C ATOM 840 C VAL 110 20.374 87.651 3.364 1.00 0.00 C ATOM 841 O VAL 110 21.236 86.789 3.547 1.00 0.00 O ATOM 842 CB VAL 110 20.611 88.509 1.117 1.00 0.00 C ATOM 843 CG1 VAL 110 20.089 88.388 -0.322 1.00 0.00 C ATOM 844 CG2 VAL 110 20.730 89.954 1.628 1.00 0.00 C ATOM 845 N ARG 111 20.085 88.540 4.338 1.00 0.00 N ATOM 846 CA ARG 111 20.945 88.459 5.492 1.00 0.00 C ATOM 847 C ARG 111 20.156 88.379 6.762 1.00 0.00 C ATOM 848 O ARG 111 19.112 89.013 6.909 1.00 0.00 O ATOM 849 CB ARG 111 21.884 89.669 5.614 1.00 0.00 C ATOM 850 CG ARG 111 22.597 89.988 4.299 1.00 0.00 C ATOM 851 CD ARG 111 23.147 88.753 3.587 1.00 0.00 C ATOM 852 NE ARG 111 23.497 89.173 2.201 1.00 0.00 N ATOM 853 CZ ARG 111 24.024 88.263 1.329 1.00 0.00 C ATOM 854 NH1 ARG 111 24.271 86.990 1.752 1.00 0.00 H ATOM 855 NH2 ARG 111 24.292 88.615 0.038 1.00 0.00 H ATOM 856 N ASN 112 20.647 87.576 7.732 1.00 0.00 N ATOM 857 CA ASN 112 19.958 87.452 8.984 1.00 0.00 C ATOM 858 C ASN 112 20.967 87.470 10.096 1.00 0.00 C ATOM 859 O ASN 112 21.890 86.656 10.105 1.00 0.00 O ATOM 860 CB ASN 112 19.167 86.139 9.092 1.00 0.00 C ATOM 861 CG ASN 112 18.261 86.275 10.298 1.00 0.00 C ATOM 862 OD1 ASN 112 17.477 87.220 10.356 1.00 0.00 O ATOM 863 ND2 ASN 112 18.381 85.330 11.271 1.00 0.00 N ATOM 864 N GLU 113 20.856 88.450 11.024 1.00 0.00 N ATOM 865 CA GLU 113 21.781 88.512 12.122 1.00 0.00 C ATOM 866 C GLU 113 21.495 87.437 13.123 1.00 0.00 C ATOM 867 O GLU 113 22.302 86.535 13.339 1.00 0.00 O ATOM 868 CB GLU 113 21.711 89.861 12.859 1.00 0.00 C ATOM 869 CG GLU 113 22.776 90.029 13.943 1.00 0.00 C ATOM 870 CD GLU 113 22.587 91.403 14.567 1.00 0.00 C ATOM 871 OE1 GLU 113 21.536 92.040 14.288 1.00 0.00 O ATOM 872 OE2 GLU 113 23.488 91.838 15.332 1.00 0.00 O ATOM 873 N GLU 114 20.294 87.479 13.734 1.00 0.00 N ATOM 874 CA GLU 114 19.956 86.476 14.696 1.00 0.00 C ATOM 875 C GLU 114 18.473 86.341 14.676 1.00 0.00 C ATOM 876 O GLU 114 17.751 87.192 15.192 1.00 0.00 O ATOM 877 CB GLU 114 20.369 86.816 16.137 1.00 0.00 C ATOM 878 CG GLU 114 21.884 86.868 16.335 1.00 0.00 C ATOM 879 CD GLU 114 22.156 86.964 17.827 1.00 0.00 C ATOM 880 OE1 GLU 114 21.188 86.770 18.610 1.00 0.00 O ATOM 881 OE2 GLU 114 23.331 87.223 18.205 1.00 0.00 O ATOM 882 N ASN 115 17.982 85.260 14.054 1.00 0.00 N ATOM 883 CA ASN 115 16.575 85.009 14.052 1.00 0.00 C ATOM 884 C ASN 115 16.399 83.535 14.048 1.00 0.00 C ATOM 885 O ASN 115 17.168 82.806 13.424 1.00 0.00 O ATOM 886 CB ASN 115 15.795 85.593 12.863 1.00 0.00 C ATOM 887 CG ASN 115 15.553 87.069 13.153 1.00 0.00 C ATOM 888 OD1 ASN 115 16.253 86.391 12.410 1.00 0.00 O ATOM 889 ND2 ASN 115 14.616 86.846 14.112 1.00 0.00 N ATOM 890 N ALA 116 15.359 83.068 14.755 1.00 0.00 N ATOM 891 CA ALA 116 15.105 81.666 14.887 1.00 0.00 C ATOM 892 C ALA 116 14.855 81.077 13.538 1.00 0.00 C ATOM 893 O ALA 116 15.387 80.015 13.222 1.00 0.00 O ATOM 894 CB ALA 116 13.859 81.362 15.740 1.00 0.00 C ATOM 895 N CYS 117 14.057 81.756 12.691 1.00 0.00 N ATOM 896 CA CYS 117 13.743 81.147 11.427 1.00 0.00 C ATOM 897 C CYS 117 14.348 81.983 10.343 1.00 0.00 C ATOM 898 O CYS 117 14.949 83.023 10.606 1.00 0.00 O ATOM 899 CB CYS 117 12.243 81.081 11.095 1.00 0.00 C ATOM 900 SG CYS 117 11.693 82.620 10.311 1.00 0.00 S ATOM 901 N HIS 118 14.215 81.514 9.080 1.00 0.00 N ATOM 902 CA HIS 118 14.734 82.234 7.950 1.00 0.00 C ATOM 903 C HIS 118 13.623 82.557 6.988 1.00 0.00 C ATOM 904 O HIS 118 12.836 81.704 6.584 1.00 0.00 O ATOM 905 CB HIS 118 15.814 81.475 7.158 1.00 0.00 C ATOM 906 CG HIS 118 17.162 81.506 7.815 1.00 0.00 C ATOM 907 ND1 HIS 118 18.099 82.489 7.585 1.00 0.00 N ATOM 908 CD2 HIS 118 17.732 80.652 8.710 1.00 0.00 C ATOM 909 CE1 HIS 118 19.180 82.184 8.346 1.00 0.00 C ATOM 910 NE2 HIS 118 19.004 81.078 9.046 1.00 0.00 N ATOM 911 N CYS 119 13.530 83.856 6.660 1.00 0.00 N ATOM 912 CA CYS 119 12.617 84.511 5.765 1.00 0.00 C ATOM 913 C CYS 119 13.079 84.430 4.323 1.00 0.00 C ATOM 914 O CYS 119 12.571 85.158 3.467 1.00 0.00 O ATOM 915 CB CYS 119 12.335 85.966 6.186 1.00 0.00 C ATOM 916 SG CYS 119 11.773 86.078 7.922 1.00 0.00 S ATOM 917 N SER 120 14.159 83.669 4.033 1.00 0.00 N ATOM 918 CA SER 120 14.694 83.635 2.688 1.00 0.00 C ATOM 919 C SER 120 14.264 82.397 1.950 1.00 0.00 C ATOM 920 O SER 120 13.822 81.415 2.538 1.00 0.00 O ATOM 921 CB SER 120 16.232 83.678 2.645 1.00 0.00 C ATOM 922 OG SER 120 16.772 82.499 3.222 1.00 0.00 O ATOM 923 N GLU 121 14.425 82.414 0.610 1.00 0.00 N ATOM 924 CA GLU 121 13.997 81.362 -0.275 1.00 0.00 C ATOM 925 C GLU 121 14.720 80.089 0.038 1.00 0.00 C ATOM 926 O GLU 121 14.148 79.003 -0.062 1.00 0.00 O ATOM 927 CB GLU 121 14.233 81.679 -1.765 1.00 0.00 C ATOM 928 CG GLU 121 15.699 81.891 -2.153 1.00 0.00 C ATOM 929 CD GLU 121 16.024 83.378 -2.063 1.00 0.00 C ATOM 930 OE1 GLU 121 15.526 84.048 -1.120 1.00 0.00 O ATOM 931 OE2 GLU 121 16.777 83.862 -2.948 1.00 0.00 O ATOM 932 N ASP 122 15.990 80.189 0.460 1.00 0.00 N ATOM 933 CA ASP 122 16.801 79.033 0.708 1.00 0.00 C ATOM 934 C ASP 122 16.100 78.188 1.723 1.00 0.00 C ATOM 935 O ASP 122 16.177 76.960 1.684 1.00 0.00 O ATOM 936 CB ASP 122 18.185 79.402 1.272 1.00 0.00 C ATOM 937 CG ASP 122 19.057 78.153 1.286 1.00 0.00 C ATOM 938 OD1 ASP 122 18.567 77.077 0.853 1.00 0.00 O ATOM 939 OD2 ASP 122 20.229 78.258 1.737 1.00 0.00 O ATOM 940 N CYS 123 15.350 78.827 2.637 1.00 0.00 N ATOM 941 CA CYS 123 14.686 78.105 3.684 1.00 0.00 C ATOM 942 C CYS 123 13.798 77.091 3.043 1.00 0.00 C ATOM 943 O CYS 123 13.595 76.010 3.588 1.00 0.00 O ATOM 944 CB CYS 123 13.775 78.975 4.577 1.00 0.00 C ATOM 945 SG CYS 123 12.212 79.469 3.776 1.00 0.00 S ATOM 946 N LEU 124 13.234 77.400 1.865 1.00 0.00 N ATOM 947 CA LEU 124 12.340 76.465 1.250 1.00 0.00 C ATOM 948 C LEU 124 13.095 75.196 0.968 1.00 0.00 C ATOM 949 O LEU 124 12.598 74.104 1.236 1.00 0.00 O ATOM 950 CB LEU 124 11.737 77.028 -0.058 1.00 0.00 C ATOM 951 CG LEU 124 10.565 76.228 -0.683 1.00 0.00 C ATOM 952 CD1 LEU 124 10.074 76.909 -1.972 1.00 0.00 C ATOM 953 CD2 LEU 124 10.898 74.746 -0.927 1.00 0.00 C ATOM 954 N SER 125 14.322 75.299 0.421 1.00 0.00 N ATOM 955 CA SER 125 15.072 74.117 0.096 1.00 0.00 C ATOM 956 C SER 125 15.440 73.374 1.344 1.00 0.00 C ATOM 957 O SER 125 15.103 72.200 1.501 1.00 0.00 O ATOM 958 CB SER 125 16.387 74.432 -0.637 1.00 0.00 C ATOM 959 OG SER 125 17.079 73.227 -0.926 1.00 0.00 O ATOM 960 N ARG 126 16.139 74.060 2.271 1.00 0.00 N ATOM 961 CA ARG 126 16.669 73.431 3.450 1.00 0.00 C ATOM 962 C ARG 126 15.591 72.981 4.394 1.00 0.00 C ATOM 963 O ARG 126 15.698 71.905 4.981 1.00 0.00 O ATOM 964 CB ARG 126 17.673 74.305 4.219 1.00 0.00 C ATOM 965 CG ARG 126 18.406 73.528 5.314 1.00 0.00 C ATOM 966 CD ARG 126 19.173 72.302 4.797 1.00 0.00 C ATOM 967 NE ARG 126 20.224 72.760 3.843 1.00 0.00 N ATOM 968 CZ ARG 126 21.007 71.839 3.206 1.00 0.00 C ATOM 969 NH1 ARG 126 20.841 70.509 3.466 1.00 0.00 H ATOM 970 NH2 ARG 126 21.955 72.242 2.311 1.00 0.00 H ATOM 971 N GLY 127 14.504 73.767 4.541 1.00 0.00 N ATOM 972 CA GLY 127 13.445 73.409 5.452 1.00 0.00 C ATOM 973 C GLY 127 13.457 74.274 6.691 1.00 0.00 C ATOM 974 O GLY 127 12.936 73.873 7.731 1.00 0.00 O ATOM 975 N ASP 128 14.118 75.446 6.611 1.00 0.00 N ATOM 976 CA ASP 128 14.287 76.480 7.612 1.00 0.00 C ATOM 977 C ASP 128 13.120 77.441 7.741 1.00 0.00 C ATOM 978 O ASP 128 13.132 78.291 8.628 1.00 0.00 O ATOM 979 CB ASP 128 15.544 77.314 7.340 1.00 0.00 C ATOM 980 CG ASP 128 16.728 76.366 7.455 1.00 0.00 C ATOM 981 OD1 ASP 128 16.779 75.591 8.447 1.00 0.00 O ATOM 982 OD2 ASP 128 17.597 76.399 6.546 1.00 0.00 O ATOM 983 N CYS 129 12.123 77.412 6.839 1.00 0.00 N ATOM 984 CA CYS 129 11.103 78.438 6.766 1.00 0.00 C ATOM 985 C CYS 129 10.284 78.605 8.027 1.00 0.00 C ATOM 986 O CYS 129 9.878 77.644 8.679 1.00 0.00 O ATOM 987 CB CYS 129 10.125 78.185 5.609 1.00 0.00 C ATOM 988 SG CYS 129 10.960 77.887 4.016 1.00 0.00 S ATOM 989 N CYS 130 9.965 79.881 8.361 1.00 0.00 N ATOM 990 CA CYS 130 9.168 80.236 9.512 1.00 0.00 C ATOM 991 C CYS 130 7.852 79.537 9.416 1.00 0.00 C ATOM 992 O CYS 130 7.423 79.120 8.342 1.00 0.00 O ATOM 993 CB CYS 130 8.808 81.734 9.609 1.00 0.00 C ATOM 994 SG CYS 130 9.734 82.764 10.791 1.00 0.00 S ATOM 995 N THR 131 7.168 79.398 10.570 1.00 0.00 N ATOM 996 CA THR 131 5.921 78.696 10.612 1.00 0.00 C ATOM 997 C THR 131 4.961 79.376 9.688 1.00 0.00 C ATOM 998 O THR 131 4.279 78.716 8.905 1.00 0.00 O ATOM 999 CB THR 131 5.298 78.693 11.978 1.00 0.00 C ATOM 1000 OG1 THR 131 6.177 78.095 12.919 1.00 0.00 O ATOM 1001 CG2 THR 131 3.982 77.903 11.913 1.00 0.00 C ATOM 1002 N ASN 132 4.885 80.720 9.749 1.00 0.00 N ATOM 1003 CA ASN 132 3.953 81.421 8.912 1.00 0.00 C ATOM 1004 C ASN 132 4.706 82.060 7.788 1.00 0.00 C ATOM 1005 O ASN 132 4.459 83.212 7.432 1.00 0.00 O ATOM 1006 CB ASN 132 3.229 82.541 9.679 1.00 0.00 C ATOM 1007 CG ASN 132 4.281 83.537 10.148 1.00 0.00 C ATOM 1008 OD1 ASN 132 5.211 83.170 10.863 1.00 0.00 O ATOM 1009 ND2 ASN 132 4.142 84.822 9.726 1.00 0.00 N ATOM 1010 N TYR 133 5.645 81.313 7.187 1.00 0.00 N ATOM 1011 CA TYR 133 6.418 81.834 6.101 1.00 0.00 C ATOM 1012 C TYR 133 5.523 81.968 4.910 1.00 0.00 C ATOM 1013 O TYR 133 5.524 82.991 4.229 1.00 0.00 O ATOM 1014 CB TYR 133 7.580 80.891 5.752 1.00 0.00 C ATOM 1015 CG TYR 133 8.387 81.468 4.643 1.00 0.00 C ATOM 1016 CD1 TYR 133 8.051 81.235 3.329 1.00 0.00 C ATOM 1017 CD2 TYR 133 9.493 82.239 4.923 1.00 0.00 C ATOM 1018 CE1 TYR 133 8.806 81.765 2.308 1.00 0.00 C ATOM 1019 CE2 TYR 133 10.251 82.771 3.907 1.00 0.00 C ATOM 1020 CZ TYR 133 9.909 82.535 2.596 1.00 0.00 C ATOM 1021 OH TYR 133 10.684 83.075 1.547 1.00 0.00 H ATOM 1022 N GLN 134 4.735 80.911 4.639 1.00 0.00 N ATOM 1023 CA GLN 134 3.841 80.861 3.520 1.00 0.00 C ATOM 1024 C GLN 134 2.701 81.813 3.712 1.00 0.00 C ATOM 1025 O GLN 134 2.259 82.461 2.768 1.00 0.00 O ATOM 1026 CB GLN 134 3.299 79.444 3.269 1.00 0.00 C ATOM 1027 CG GLN 134 2.466 78.860 4.409 1.00 0.00 C ATOM 1028 CD GLN 134 2.201 77.400 4.058 1.00 0.00 C ATOM 1029 OE1 GLN 134 1.402 76.714 4.691 1.00 0.00 O ATOM 1030 NE2 GLN 134 2.907 76.904 3.007 1.00 0.00 N ATOM 1031 N VAL 135 2.175 81.946 4.939 1.00 0.00 N ATOM 1032 CA VAL 135 1.047 82.818 5.081 1.00 0.00 C ATOM 1033 C VAL 135 1.455 84.209 4.696 1.00 0.00 C ATOM 1034 O VAL 135 0.748 84.868 3.937 1.00 0.00 O ATOM 1035 CB VAL 135 0.461 82.833 6.469 1.00 0.00 C ATOM 1036 CG1 VAL 135 1.490 83.394 7.462 1.00 0.00 C ATOM 1037 CG2 VAL 135 -0.856 83.623 6.433 1.00 0.00 C ATOM 1038 N VAL 136 2.591 84.704 5.224 1.00 0.00 N ATOM 1039 CA VAL 136 3.038 86.016 4.851 1.00 0.00 C ATOM 1040 C VAL 136 3.583 86.063 3.454 1.00 0.00 C ATOM 1041 O VAL 136 3.133 86.866 2.638 1.00 0.00 O ATOM 1042 CB VAL 136 4.098 86.573 5.766 1.00 0.00 C ATOM 1043 CG1 VAL 136 3.453 86.909 7.115 1.00 0.00 C ATOM 1044 CG2 VAL 136 5.240 85.550 5.882 1.00 0.00 C ATOM 1045 N CYS 137 4.593 85.219 3.151 1.00 0.00 N ATOM 1046 CA CYS 137 5.249 85.266 1.866 1.00 0.00 C ATOM 1047 C CYS 137 4.370 84.754 0.759 1.00 0.00 C ATOM 1048 O CYS 137 4.157 85.424 -0.250 1.00 0.00 O ATOM 1049 CB CYS 137 6.550 84.446 1.844 1.00 0.00 C ATOM 1050 SG CYS 137 7.687 84.923 3.180 1.00 0.00 S ATOM 1051 N LYS 138 3.798 83.554 0.962 1.00 0.00 N ATOM 1052 CA LYS 138 3.006 82.819 0.013 1.00 0.00 C ATOM 1053 C LYS 138 1.692 83.486 -0.212 1.00 0.00 C ATOM 1054 O LYS 138 0.875 82.973 -0.968 1.00 0.00 O ATOM 1055 CB LYS 138 2.771 81.331 0.360 1.00 0.00 C ATOM 1056 CG LYS 138 2.067 80.515 -0.727 1.00 0.00 C ATOM 1057 CD LYS 138 2.957 80.205 -1.929 1.00 0.00 C ATOM 1058 CE LYS 138 3.705 78.875 -1.801 1.00 0.00 C ATOM 1059 NZ LYS 138 4.637 78.919 -0.650 1.00 0.00 N ATOM 1060 N GLY 139 1.405 84.601 0.484 1.00 0.00 N ATOM 1061 CA GLY 139 0.131 85.257 0.341 1.00 0.00 C ATOM 1062 C GLY 139 -0.085 85.621 -1.100 1.00 0.00 C ATOM 1063 O GLY 139 0.750 85.359 -1.965 1.00 0.00 O ATOM 1064 N GLU 140 -1.255 86.228 -1.403 1.00 0.00 N ATOM 1065 CA GLU 140 -1.582 86.486 -2.777 1.00 0.00 C ATOM 1066 C GLU 140 -1.326 87.918 -3.108 1.00 0.00 C ATOM 1067 O GLU 140 -2.027 88.817 -2.642 1.00 0.00 O ATOM 1068 CB GLU 140 -3.060 86.203 -3.095 1.00 0.00 C ATOM 1069 CG GLU 140 -3.349 85.913 -4.568 1.00 0.00 C ATOM 1070 CD GLU 140 -3.222 87.211 -5.343 1.00 0.00 C ATOM 1071 OE1 GLU 140 -4.097 88.098 -5.153 1.00 0.00 O ATOM 1072 OE2 GLU 140 -2.247 87.336 -6.130 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.73 64.8 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 64.31 61.3 62 100.0 62 ARMSMC BURIED . . . . . . . . 32.06 73.1 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.52 48.7 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 81.45 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 98.55 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 44.79 76.9 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.85 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 80.91 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 81.22 43.8 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 109.75 0.0 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.33 23.1 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 83.94 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 81.91 20.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 106.99 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.85 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 71.85 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 78.16 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 57.18 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.17 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.17 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0482 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.45 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.25 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.34 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.64 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.38 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.08 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.29 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.60 112 100.0 112 CRMSSC BURIED . . . . . . . . 3.76 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.86 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.23 240 100.0 240 CRMSALL BURIED . . . . . . . . 2.80 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.630 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 1.881 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 1.013 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.755 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.037 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 1.077 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.621 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 3.715 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 4.164 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 2.473 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.604 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.977 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 1.752 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 18 38 39 43 45 45 45 DISTCA CA (P) 40.00 84.44 86.67 95.56 100.00 45 DISTCA CA (RMS) 0.76 1.14 1.20 1.81 2.17 DISTCA ALL (N) 99 214 259 302 330 345 345 DISTALL ALL (P) 28.70 62.03 75.07 87.54 95.65 345 DISTALL ALL (RMS) 0.76 1.17 1.48 2.07 2.79 DISTALL END of the results output