####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS147_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS147_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.39 2.39 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 98 - 140 1.81 2.49 LCS_AVERAGE: 91.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 115 - 140 0.99 2.55 LCS_AVERAGE: 44.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 4 45 3 3 7 9 11 22 32 39 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 5 45 3 3 4 5 6 9 16 22 28 36 41 44 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 43 45 3 3 4 9 21 32 36 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 14 43 45 10 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 14 43 45 12 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 14 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 14 43 45 12 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 14 43 45 8 28 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 14 43 45 6 22 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 14 43 45 6 21 32 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 14 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 14 43 45 3 21 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 14 43 45 11 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 14 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 14 43 45 6 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 14 43 45 3 5 14 26 36 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 14 43 45 6 18 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 5 43 45 3 5 14 20 28 35 38 40 42 42 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 25 43 45 6 18 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 43 45 7 24 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 43 45 9 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 43 45 6 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 43 45 4 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 43 45 5 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 43 45 5 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 43 45 8 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 43 45 10 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 43 45 8 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 43 45 13 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 43 45 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 43 45 3 14 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 43 45 3 7 10 33 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 26 43 45 3 5 10 24 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 78.91 ( 44.99 91.75 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 30 34 37 38 40 41 41 42 43 43 44 45 45 45 45 45 45 45 45 GDT PERCENT_AT 31.11 66.67 75.56 82.22 84.44 88.89 91.11 91.11 93.33 95.56 95.56 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.67 0.79 0.99 1.03 1.25 1.35 1.35 1.61 1.91 1.81 2.10 2.39 2.39 2.39 2.39 2.39 2.39 2.39 2.39 GDT RMS_ALL_AT 2.75 2.57 2.57 2.54 2.57 2.57 2.56 2.56 2.49 2.42 2.49 2.41 2.39 2.39 2.39 2.39 2.39 2.39 2.39 2.39 # Checking swapping # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: D 128 D 128 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 7.956 0 0.112 0.206 9.540 7.024 4.626 LGA A 97 A 97 9.306 0 0.639 0.611 11.386 6.071 4.857 LGA R 98 R 98 6.048 0 0.420 1.342 15.555 24.762 10.173 LGA G 99 G 99 0.664 0 0.332 0.332 3.651 70.000 70.000 LGA W 100 W 100 0.540 0 0.197 0.616 4.380 92.857 66.905 LGA E 101 E 101 0.556 0 0.079 0.118 1.651 90.595 85.608 LGA C 102 C 102 0.735 0 0.038 0.642 1.934 85.952 84.524 LGA T 103 T 103 1.288 0 0.046 0.201 2.558 79.286 73.129 LGA K 104 K 104 1.684 0 0.039 1.361 5.091 72.976 58.942 LGA D 105 D 105 2.331 0 0.092 0.438 2.638 66.786 63.869 LGA R 106 R 106 0.680 0 0.059 0.803 2.880 88.214 84.242 LGA C 107 C 107 1.763 0 0.655 1.098 4.376 64.048 59.683 LGA G 108 G 108 0.686 0 0.082 0.082 1.221 88.214 88.214 LGA E 109 E 109 0.651 0 0.169 1.224 4.273 88.214 78.783 LGA V 110 V 110 0.784 0 0.642 0.596 2.970 79.881 79.320 LGA R 111 R 111 3.393 0 0.131 1.306 13.532 50.357 21.732 LGA N 112 N 112 2.199 0 0.068 0.549 6.265 62.976 54.286 LGA E 113 E 113 5.819 0 0.188 1.278 13.666 30.357 14.021 LGA E 114 E 114 2.466 0 0.595 1.102 7.938 57.500 39.577 LGA N 115 N 115 1.421 0 0.051 1.202 3.581 83.810 71.012 LGA A 116 A 116 1.036 0 0.106 0.145 1.530 85.952 83.333 LGA C 117 C 117 0.431 0 0.050 0.143 1.098 95.238 93.730 LGA H 118 H 118 0.737 0 0.156 0.187 1.460 88.214 89.571 LGA C 119 C 119 0.859 0 0.060 0.275 1.462 88.214 87.460 LGA S 120 S 120 0.441 0 0.058 0.111 0.744 92.857 93.651 LGA E 121 E 121 0.767 0 0.097 0.807 3.296 88.214 77.619 LGA D 122 D 122 0.624 0 0.192 0.928 3.915 92.857 78.214 LGA C 123 C 123 0.511 0 0.057 0.099 0.766 92.857 93.651 LGA L 124 L 124 0.985 0 0.052 0.942 4.430 88.214 71.369 LGA S 125 S 125 0.888 0 0.177 0.671 2.945 83.810 80.476 LGA R 126 R 126 1.118 0 0.076 1.435 7.817 83.690 59.437 LGA G 127 G 127 0.942 0 0.184 0.184 0.942 90.476 90.476 LGA D 128 D 128 0.804 0 0.030 0.770 2.899 90.476 82.917 LGA C 129 C 129 0.842 0 0.026 0.190 0.899 90.476 90.476 LGA C 130 C 130 0.544 0 0.051 0.063 1.119 92.857 90.556 LGA T 131 T 131 0.938 0 0.172 0.156 1.924 92.857 85.510 LGA N 132 N 132 0.359 0 0.169 0.288 0.936 95.238 96.429 LGA Y 133 Y 133 0.638 0 0.076 0.253 1.039 90.476 91.310 LGA Q 134 Q 134 0.898 0 0.067 1.212 5.099 90.476 72.910 LGA V 135 V 135 0.573 0 0.034 1.173 2.726 90.476 82.313 LGA V 136 V 136 0.444 0 0.066 0.069 0.654 95.238 95.918 LGA C 137 C 137 0.509 0 0.129 0.716 3.534 88.214 79.603 LGA K 138 K 138 1.578 0 0.214 0.821 8.319 69.524 43.704 LGA G 139 G 139 2.896 0 0.383 0.383 4.588 52.857 52.857 LGA E 140 E 140 3.211 0 0.188 0.826 11.966 53.810 27.460 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.389 2.360 3.907 76.743 68.988 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 41 1.35 85.000 88.786 2.827 LGA_LOCAL RMSD: 1.350 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.561 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.389 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.479879 * X + 0.541591 * Y + 0.690214 * Z + -34.036995 Y_new = -0.350560 * X + -0.839552 * Y + 0.415042 * Z + 95.480171 Z_new = 0.804254 * X + -0.042791 * Y + 0.592744 * Z + -41.306568 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.510677 -0.934418 -0.072067 [DEG: -143.8512 -53.5382 -4.1291 ] ZXZ: 2.112189 0.936335 1.623953 [DEG: 121.0195 53.6481 93.0456 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS147_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS147_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 41 1.35 88.786 2.39 REMARK ---------------------------------------------------------- MOLECULE T0543TS147_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gso_A ATOM 728 N THR 96 10.316 77.870 21.585 1.00 4.58 N ATOM 729 CA THR 96 11.234 78.199 20.509 1.00 4.58 C ATOM 730 C THR 96 11.128 79.625 19.957 1.00 4.58 C ATOM 731 O THR 96 11.784 79.973 18.981 1.00 4.58 O ATOM 732 CB THR 96 11.106 77.187 19.392 1.00 4.58 C ATOM 733 OG1 THR 96 11.226 75.881 19.935 1.00 4.58 O ATOM 734 CG2 THR 96 12.232 77.368 18.356 1.00 4.58 C ATOM 735 N ALA 97 10.325 80.498 20.575 1.00 3.37 N ATOM 736 CA ALA 97 9.703 81.728 20.143 1.00 3.37 C ATOM 737 C ALA 97 10.465 82.837 19.488 1.00 3.37 C ATOM 738 O ALA 97 9.774 83.767 19.093 1.00 3.37 O ATOM 739 CB ALA 97 8.875 82.382 21.257 1.00 3.37 C ATOM 740 N ARG 98 11.811 82.912 19.454 1.00 2.91 N ATOM 741 CA ARG 98 12.462 84.089 18.904 1.00 2.91 C ATOM 742 C ARG 98 11.924 84.530 17.568 1.00 2.91 C ATOM 743 O ARG 98 12.370 84.086 16.517 1.00 2.91 O ATOM 744 CB ARG 98 13.980 83.919 18.723 1.00 2.91 C ATOM 745 CG ARG 98 14.783 83.915 20.025 1.00 2.91 C ATOM 746 CD ARG 98 14.468 82.735 20.941 1.00 2.91 C ATOM 747 NE ARG 98 14.195 81.568 20.059 1.00 2.91 N ATOM 748 CZ ARG 98 15.221 80.807 19.582 1.00 2.91 C ATOM 749 NH1 ARG 98 16.510 81.091 19.933 1.00 2.91 H ATOM 750 NH2 ARG 98 14.951 79.762 18.748 1.00 2.91 H ATOM 751 N GLY 99 10.984 85.494 17.588 1.00 2.60 N ATOM 752 CA GLY 99 10.349 86.083 16.452 1.00 2.60 C ATOM 753 C GLY 99 9.214 85.192 16.059 1.00 2.60 C ATOM 754 O GLY 99 8.046 85.458 16.338 1.00 2.60 O ATOM 755 N TRP 100 9.577 84.060 15.433 1.00 2.35 N ATOM 756 CA TRP 100 8.668 83.071 14.945 1.00 2.35 C ATOM 757 C TRP 100 8.025 83.486 13.677 1.00 2.35 C ATOM 758 O TRP 100 7.641 82.617 12.902 1.00 2.35 O ATOM 759 CB TRP 100 7.437 82.832 15.817 1.00 2.35 C ATOM 760 CG TRP 100 7.641 81.867 16.925 1.00 2.35 C ATOM 761 CD1 TRP 100 7.136 81.835 18.186 1.00 2.35 C ATOM 762 CD2 TRP 100 8.460 80.708 16.767 1.00 2.35 C ATOM 763 NE1 TRP 100 7.532 80.678 18.804 1.00 2.35 N ATOM 764 CE2 TRP 100 8.365 79.987 17.947 1.00 2.35 C ATOM 765 CE3 TRP 100 9.212 80.277 15.713 1.00 2.35 C ATOM 766 CZ2 TRP 100 9.023 78.805 18.087 1.00 2.35 C ATOM 767 CZ3 TRP 100 9.899 79.097 15.868 1.00 2.35 C ATOM 768 CH2 TRP 100 9.800 78.376 17.035 1.00 2.35 H ATOM 769 N GLU 101 7.937 84.793 13.386 1.00 2.41 N ATOM 770 CA GLU 101 7.117 85.152 12.270 1.00 2.41 C ATOM 771 C GLU 101 7.947 85.851 11.252 1.00 2.41 C ATOM 772 O GLU 101 8.967 86.460 11.567 1.00 2.41 O ATOM 773 CB GLU 101 5.970 86.102 12.650 1.00 2.41 C ATOM 774 CG GLU 101 4.941 85.466 13.588 1.00 2.41 C ATOM 775 CD GLU 101 3.913 86.528 13.946 1.00 2.41 C ATOM 776 OE1 GLU 101 4.003 87.650 13.379 1.00 2.41 O ATOM 777 OE2 GLU 101 3.029 86.234 14.794 1.00 2.41 O ATOM 778 N CYS 102 7.510 85.751 9.984 1.00 2.18 N ATOM 779 CA CYS 102 8.186 86.374 8.893 1.00 2.18 C ATOM 780 C CYS 102 7.288 87.467 8.401 1.00 2.18 C ATOM 781 O CYS 102 6.068 87.366 8.520 1.00 2.18 O ATOM 782 CB CYS 102 8.391 85.403 7.725 1.00 2.18 C ATOM 783 SG CYS 102 9.532 86.038 6.476 1.00 2.18 S ATOM 784 N THR 103 7.869 88.563 7.869 1.00 2.18 N ATOM 785 CA THR 103 7.058 89.619 7.329 1.00 2.18 C ATOM 786 C THR 103 7.101 89.477 5.841 1.00 2.18 C ATOM 787 O THR 103 7.959 88.782 5.305 1.00 2.18 O ATOM 788 CB THR 103 7.556 90.995 7.657 1.00 2.18 C ATOM 789 OG1 THR 103 8.837 91.201 7.079 1.00 2.18 O ATOM 790 CG2 THR 103 7.631 91.139 9.186 1.00 2.18 C ATOM 791 N LYS 104 6.169 90.145 5.133 1.00 2.74 N ATOM 792 CA LYS 104 6.091 90.047 3.703 1.00 2.74 C ATOM 793 C LYS 104 7.343 90.593 3.095 1.00 2.74 C ATOM 794 O LYS 104 7.870 90.035 2.136 1.00 2.74 O ATOM 795 CB LYS 104 4.907 90.821 3.101 1.00 2.74 C ATOM 796 CG LYS 104 3.560 90.121 3.294 1.00 2.74 C ATOM 797 CD LYS 104 3.089 90.071 4.747 1.00 2.74 C ATOM 798 CE LYS 104 2.373 91.345 5.190 1.00 2.74 C ATOM 799 NZ LYS 104 3.306 92.490 5.115 1.00 2.74 N ATOM 800 N ASP 105 7.851 91.714 3.635 1.00 4.04 N ATOM 801 CA ASP 105 9.032 92.340 3.120 1.00 4.04 C ATOM 802 C ASP 105 10.230 91.471 3.365 1.00 4.04 C ATOM 803 O ASP 105 11.194 91.498 2.604 1.00 4.04 O ATOM 804 CB ASP 105 9.267 93.748 3.710 1.00 4.04 C ATOM 805 CG ASP 105 9.376 93.701 5.231 1.00 4.04 C ATOM 806 OD1 ASP 105 10.221 92.937 5.766 1.00 4.04 O ATOM 807 OD2 ASP 105 8.616 94.467 5.885 1.00 4.04 O ATOM 808 N ARG 106 10.186 90.686 4.453 1.00 5.11 N ATOM 809 CA ARG 106 11.242 89.860 4.967 1.00 5.11 C ATOM 810 C ARG 106 11.513 88.639 4.110 1.00 5.11 C ATOM 811 O ARG 106 12.572 88.032 4.236 1.00 5.11 O ATOM 812 CB ARG 106 10.943 89.409 6.413 1.00 5.11 C ATOM 813 CG ARG 106 12.171 89.070 7.266 1.00 5.11 C ATOM 814 CD ARG 106 11.815 88.912 8.751 1.00 5.11 C ATOM 815 NE ARG 106 13.071 88.785 9.547 1.00 5.11 N ATOM 816 CZ ARG 106 12.996 88.373 10.848 1.00 5.11 C ATOM 817 NH1 ARG 106 11.796 87.975 11.363 1.00 5.11 H ATOM 818 NH2 ARG 106 14.107 88.365 11.641 1.00 5.11 H ATOM 819 N CYS 107 10.562 88.224 3.244 1.00 7.05 N ATOM 820 CA CYS 107 10.584 86.946 2.550 1.00 7.05 C ATOM 821 C CYS 107 11.765 86.680 1.627 1.00 7.05 C ATOM 822 O CYS 107 12.226 85.554 1.495 1.00 7.05 O ATOM 823 CB CYS 107 9.289 86.688 1.742 1.00 7.05 C ATOM 824 SG CYS 107 9.297 85.090 0.868 1.00 7.05 S ATOM 825 N GLY 108 12.219 87.649 0.843 1.00 6.85 N ATOM 826 CA GLY 108 13.337 87.537 -0.060 1.00 6.85 C ATOM 827 C GLY 108 14.666 87.654 0.630 1.00 6.85 C ATOM 828 O GLY 108 15.704 87.381 0.032 1.00 6.85 O ATOM 829 N GLU 109 14.647 88.198 1.856 1.00 9.15 N ATOM 830 CA GLU 109 15.727 88.629 2.710 1.00 9.15 C ATOM 831 C GLU 109 17.022 87.868 2.581 1.00 9.15 C ATOM 832 O GLU 109 17.104 86.663 2.809 1.00 9.15 O ATOM 833 CB GLU 109 15.258 88.595 4.175 1.00 9.15 C ATOM 834 CG GLU 109 16.350 88.736 5.222 1.00 9.15 C ATOM 835 CD GLU 109 16.917 87.349 5.507 1.00 9.15 C ATOM 836 OE1 GLU 109 16.149 86.489 6.013 1.00 9.15 O ATOM 837 OE2 GLU 109 18.125 87.132 5.228 1.00 9.15 O ATOM 838 N VAL 110 18.083 88.613 2.189 1.00 7.62 N ATOM 839 CA VAL 110 19.437 88.165 1.993 1.00 7.62 C ATOM 840 C VAL 110 20.187 87.909 3.276 1.00 7.62 C ATOM 841 O VAL 110 20.995 86.982 3.338 1.00 7.62 O ATOM 842 CB VAL 110 20.252 89.137 1.187 1.00 7.62 C ATOM 843 CG1 VAL 110 20.410 90.445 1.984 1.00 7.62 C ATOM 844 CG2 VAL 110 21.587 88.468 0.819 1.00 7.62 C ATOM 845 N ARG 111 19.991 88.736 4.328 1.00 10.23 N ATOM 846 CA ARG 111 20.793 88.542 5.513 1.00 10.23 C ATOM 847 C ARG 111 19.972 88.822 6.735 1.00 10.23 C ATOM 848 O ARG 111 18.989 89.559 6.677 1.00 10.23 O ATOM 849 CB ARG 111 22.008 89.479 5.587 1.00 10.23 C ATOM 850 CG ARG 111 23.055 89.210 4.509 1.00 10.23 C ATOM 851 CD ARG 111 24.228 90.187 4.559 1.00 10.23 C ATOM 852 NE ARG 111 25.160 89.810 3.463 1.00 10.23 N ATOM 853 CZ ARG 111 24.898 90.234 2.193 1.00 10.23 C ATOM 854 NH1 ARG 111 23.762 90.946 1.937 1.00 10.23 H ATOM 855 NH2 ARG 111 25.764 89.939 1.181 1.00 10.23 H ATOM 856 N ASN 112 20.355 88.211 7.881 1.00 8.68 N ATOM 857 CA ASN 112 19.656 88.449 9.116 1.00 8.68 C ATOM 858 C ASN 112 20.653 88.468 10.240 1.00 8.68 C ATOM 859 O ASN 112 21.531 87.608 10.310 1.00 8.68 O ATOM 860 CB ASN 112 18.632 87.346 9.428 1.00 8.68 C ATOM 861 CG ASN 112 17.654 87.879 10.459 1.00 8.68 C ATOM 862 OD1 ASN 112 18.022 88.299 11.554 1.00 8.68 O ATOM 863 ND2 ASN 112 16.351 87.876 10.078 1.00 8.68 N ATOM 864 N GLU 113 20.565 89.482 11.132 1.00 8.32 N ATOM 865 CA GLU 113 21.466 89.580 12.251 1.00 8.32 C ATOM 866 C GLU 113 21.204 88.505 13.264 1.00 8.32 C ATOM 867 O GLU 113 22.105 87.746 13.617 1.00 8.32 O ATOM 868 CB GLU 113 21.370 90.933 12.973 1.00 8.32 C ATOM 869 CG GLU 113 19.966 91.268 13.480 1.00 8.32 C ATOM 870 CD GLU 113 20.043 92.620 14.170 1.00 8.32 C ATOM 871 OE1 GLU 113 21.139 92.945 14.699 1.00 8.32 O ATOM 872 OE2 GLU 113 19.011 93.342 14.182 1.00 8.32 O ATOM 873 N GLU 114 19.954 88.403 13.765 1.00 5.30 N ATOM 874 CA GLU 114 19.641 87.363 14.705 1.00 5.30 C ATOM 875 C GLU 114 18.202 87.017 14.510 1.00 5.30 C ATOM 876 O GLU 114 17.324 87.834 14.785 1.00 5.30 O ATOM 877 CB GLU 114 19.766 87.772 16.180 1.00 5.30 C ATOM 878 CG GLU 114 19.420 86.623 17.129 1.00 5.30 C ATOM 879 CD GLU 114 19.307 87.180 18.540 1.00 5.30 C ATOM 880 OE1 GLU 114 20.199 87.973 18.941 1.00 5.30 O ATOM 881 OE2 GLU 114 18.317 86.819 19.233 1.00 5.30 O ATOM 882 N ASN 115 17.920 85.790 14.035 1.00 3.62 N ATOM 883 CA ASN 115 16.549 85.410 13.863 1.00 3.62 C ATOM 884 C ASN 115 16.414 83.929 14.046 1.00 3.62 C ATOM 885 O ASN 115 17.222 83.138 13.566 1.00 3.62 O ATOM 886 CB ASN 115 15.949 85.821 12.495 1.00 3.62 C ATOM 887 CG ASN 115 16.708 85.215 11.311 1.00 3.62 C ATOM 888 OD1 ASN 115 16.200 85.224 10.191 1.00 3.62 O ATOM 889 ND2 ASN 115 17.942 84.695 11.534 1.00 3.62 N ATOM 890 N ALA 116 15.369 83.524 14.785 1.00 3.13 N ATOM 891 CA ALA 116 15.082 82.147 15.072 1.00 3.13 C ATOM 892 C ALA 116 14.686 81.416 13.826 1.00 3.13 C ATOM 893 O ALA 116 14.880 80.206 13.741 1.00 3.13 O ATOM 894 CB ALA 116 13.968 81.919 16.105 1.00 3.13 C ATOM 895 N CYS 117 14.037 82.101 12.862 1.00 2.69 N ATOM 896 CA CYS 117 13.623 81.416 11.668 1.00 2.69 C ATOM 897 C CYS 117 14.149 82.171 10.497 1.00 2.69 C ATOM 898 O CYS 117 14.627 83.290 10.665 1.00 2.69 O ATOM 899 CB CYS 117 12.095 81.296 11.517 1.00 2.69 C ATOM 900 SG CYS 117 11.280 82.911 11.383 1.00 2.69 S ATOM 901 N HIS 118 14.098 81.585 9.276 1.00 3.28 N ATOM 902 CA HIS 118 14.657 82.335 8.191 1.00 3.28 C ATOM 903 C HIS 118 13.667 82.564 7.089 1.00 3.28 C ATOM 904 O HIS 118 13.084 81.668 6.488 1.00 3.28 O ATOM 905 CB HIS 118 15.952 81.733 7.638 1.00 3.28 C ATOM 906 CG HIS 118 16.970 81.704 8.737 1.00 3.28 C ATOM 907 ND1 HIS 118 17.428 80.553 9.333 1.00 3.28 N ATOM 908 CD2 HIS 118 17.570 82.732 9.400 1.00 3.28 C ATOM 909 CE1 HIS 118 18.278 80.935 10.319 1.00 3.28 C ATOM 910 NE2 HIS 118 18.396 82.247 10.398 1.00 3.28 N ATOM 911 N CYS 119 13.478 83.859 6.842 1.00 2.99 N ATOM 912 CA CYS 119 12.710 84.569 5.876 1.00 2.99 C ATOM 913 C CYS 119 13.403 84.551 4.560 1.00 2.99 C ATOM 914 O CYS 119 13.142 85.445 3.773 1.00 2.99 O ATOM 915 CB CYS 119 12.501 86.042 6.245 1.00 2.99 C ATOM 916 SG CYS 119 11.248 86.196 7.537 1.00 2.99 S ATOM 917 N SER 120 14.434 83.716 4.335 1.00 3.08 N ATOM 918 CA SER 120 15.053 83.745 3.029 1.00 3.08 C ATOM 919 C SER 120 14.605 82.550 2.227 1.00 3.08 C ATOM 920 O SER 120 13.963 81.641 2.746 1.00 3.08 O ATOM 921 CB SER 120 16.588 83.726 3.101 1.00 3.08 C ATOM 922 OG SER 120 17.027 82.555 3.772 1.00 3.08 O ATOM 923 N GLU 121 14.920 82.550 0.912 1.00 2.59 N ATOM 924 CA GLU 121 14.567 81.531 -0.045 1.00 2.59 C ATOM 925 C GLU 121 15.268 80.249 0.282 1.00 2.59 C ATOM 926 O GLU 121 14.756 79.169 -0.000 1.00 2.59 O ATOM 927 CB GLU 121 14.953 81.886 -1.491 1.00 2.59 C ATOM 928 CG GLU 121 14.138 83.030 -2.097 1.00 2.59 C ATOM 929 CD GLU 121 14.540 83.150 -3.562 1.00 2.59 C ATOM 930 OE1 GLU 121 15.310 82.273 -4.034 1.00 2.59 O ATOM 931 OE2 GLU 121 14.079 84.115 -4.228 1.00 2.59 O ATOM 932 N ASP 122 16.470 80.351 0.873 1.00 3.61 N ATOM 933 CA ASP 122 17.325 79.248 1.201 1.00 3.61 C ATOM 934 C ASP 122 16.608 78.356 2.169 1.00 3.61 C ATOM 935 O ASP 122 16.798 77.144 2.162 1.00 3.61 O ATOM 936 CB ASP 122 18.626 79.732 1.873 1.00 3.61 C ATOM 937 CG ASP 122 19.666 78.620 1.893 1.00 3.61 C ATOM 938 OD1 ASP 122 19.310 77.453 2.202 1.00 3.61 O ATOM 939 OD2 ASP 122 20.849 78.934 1.589 1.00 3.61 O ATOM 940 N CYS 123 15.730 78.930 3.007 1.00 3.81 N ATOM 941 CA CYS 123 15.069 78.212 4.058 1.00 3.81 C ATOM 942 C CYS 123 14.284 77.074 3.496 1.00 3.81 C ATOM 943 O CYS 123 14.124 76.056 4.156 1.00 3.81 O ATOM 944 CB CYS 123 14.079 79.065 4.880 1.00 3.81 C ATOM 945 SG CYS 123 12.570 79.502 3.962 1.00 3.81 S ATOM 946 N LEU 124 13.732 77.204 2.285 1.00 4.30 N ATOM 947 CA LEU 124 12.948 76.120 1.770 1.00 4.30 C ATOM 948 C LEU 124 13.810 74.899 1.601 1.00 4.30 C ATOM 949 O LEU 124 13.407 73.791 1.956 1.00 4.30 O ATOM 950 CB LEU 124 12.322 76.447 0.403 1.00 4.30 C ATOM 951 CG LEU 124 11.331 77.627 0.447 1.00 4.30 C ATOM 952 CD1 LEU 124 12.037 78.938 0.832 1.00 4.30 C ATOM 953 CD2 LEU 124 10.539 77.743 -0.865 1.00 4.30 C ATOM 954 N SER 125 15.025 75.065 1.043 1.00 3.47 N ATOM 955 CA SER 125 15.895 73.946 0.805 1.00 3.47 C ATOM 956 C SER 125 16.349 73.348 2.105 1.00 3.47 C ATOM 957 O SER 125 16.323 72.130 2.278 1.00 3.47 O ATOM 958 CB SER 125 17.168 74.336 0.036 1.00 3.47 C ATOM 959 OG SER 125 16.831 74.820 -1.254 1.00 3.47 O ATOM 960 N ARG 126 16.820 74.211 3.028 1.00 3.33 N ATOM 961 CA ARG 126 17.374 73.834 4.301 1.00 3.33 C ATOM 962 C ARG 126 16.333 73.399 5.300 1.00 3.33 C ATOM 963 O ARG 126 16.636 72.655 6.227 1.00 3.33 O ATOM 964 CB ARG 126 18.244 74.934 4.921 1.00 3.33 C ATOM 965 CG ARG 126 18.916 74.512 6.226 1.00 3.33 C ATOM 966 CD ARG 126 19.782 75.607 6.846 1.00 3.33 C ATOM 967 NE ARG 126 18.999 76.274 7.922 1.00 3.33 N ATOM 968 CZ ARG 126 18.962 75.722 9.169 1.00 3.33 C ATOM 969 NH1 ARG 126 19.527 74.501 9.392 1.00 3.33 H ATOM 970 NH2 ARG 126 18.372 76.398 10.196 1.00 3.33 H ATOM 971 N GLY 127 15.087 73.890 5.195 1.00 2.67 N ATOM 972 CA GLY 127 14.039 73.512 6.113 1.00 2.67 C ATOM 973 C GLY 127 13.872 74.541 7.203 1.00 2.67 C ATOM 974 O GLY 127 13.034 74.401 8.091 1.00 2.67 O ATOM 975 N ASP 128 14.679 75.606 7.148 1.00 2.50 N ATOM 976 CA ASP 128 14.752 76.717 8.054 1.00 2.50 C ATOM 977 C ASP 128 13.641 77.726 7.902 1.00 2.50 C ATOM 978 O ASP 128 13.773 78.840 8.397 1.00 2.50 O ATOM 979 CB ASP 128 16.114 77.432 8.072 1.00 2.50 C ATOM 980 CG ASP 128 16.459 77.900 6.691 1.00 2.50 C ATOM 981 OD1 ASP 128 16.738 77.009 5.853 1.00 2.50 O ATOM 982 OD2 ASP 128 16.480 79.136 6.454 1.00 2.50 O ATOM 983 N CYS 129 12.586 77.456 7.110 1.00 2.12 N ATOM 984 CA CYS 129 11.550 78.447 6.936 1.00 2.12 C ATOM 985 C CYS 129 10.743 78.666 8.198 1.00 2.12 C ATOM 986 O CYS 129 10.541 77.768 9.006 1.00 2.12 O ATOM 987 CB CYS 129 10.565 78.102 5.808 1.00 2.12 C ATOM 988 SG CYS 129 11.358 77.884 4.183 1.00 2.12 S ATOM 989 N CYS 130 10.216 79.892 8.394 1.00 2.24 N ATOM 990 CA CYS 130 9.466 80.234 9.578 1.00 2.24 C ATOM 991 C CYS 130 8.172 79.479 9.548 1.00 2.24 C ATOM 992 O CYS 130 7.781 78.943 8.514 1.00 2.24 O ATOM 993 CB CYS 130 9.075 81.723 9.650 1.00 2.24 C ATOM 994 SG CYS 130 10.474 82.879 9.522 1.00 2.24 S ATOM 995 N THR 131 7.472 79.422 10.702 1.00 2.24 N ATOM 996 CA THR 131 6.248 78.679 10.788 1.00 2.24 C ATOM 997 C THR 131 5.280 79.248 9.799 1.00 2.24 C ATOM 998 O THR 131 4.688 78.513 9.013 1.00 2.24 O ATOM 999 CB THR 131 5.596 78.772 12.137 1.00 2.24 C ATOM 1000 OG1 THR 131 5.231 80.116 12.412 1.00 2.24 O ATOM 1001 CG2 THR 131 6.576 78.259 13.205 1.00 2.24 C ATOM 1002 N ASN 132 5.111 80.584 9.791 1.00 2.21 N ATOM 1003 CA ASN 132 4.150 81.173 8.907 1.00 2.21 C ATOM 1004 C ASN 132 4.848 81.735 7.710 1.00 2.21 C ATOM 1005 O ASN 132 4.462 82.780 7.195 1.00 2.21 O ATOM 1006 CB ASN 132 3.382 82.319 9.588 1.00 2.21 C ATOM 1007 CG ASN 132 4.393 83.381 10.000 1.00 2.21 C ATOM 1008 OD1 ASN 132 5.449 83.073 10.554 1.00 2.21 O ATOM 1009 ND2 ASN 132 4.068 84.671 9.717 1.00 2.21 N ATOM 1010 N TYR 133 5.877 81.040 7.202 1.00 2.56 N ATOM 1011 CA TYR 133 6.599 81.535 6.064 1.00 2.56 C ATOM 1012 C TYR 133 5.734 81.497 4.843 1.00 2.56 C ATOM 1013 O TYR 133 5.694 82.464 4.085 1.00 2.56 O ATOM 1014 CB TYR 133 7.879 80.714 5.811 1.00 2.56 C ATOM 1015 CG TYR 133 8.613 81.239 4.624 1.00 2.56 C ATOM 1016 CD1 TYR 133 9.085 82.528 4.599 1.00 2.56 C ATOM 1017 CD2 TYR 133 8.869 80.414 3.549 1.00 2.56 C ATOM 1018 CE1 TYR 133 9.779 83.002 3.509 1.00 2.56 C ATOM 1019 CE2 TYR 133 9.562 80.880 2.458 1.00 2.56 C ATOM 1020 CZ TYR 133 10.015 82.176 2.437 1.00 2.56 C ATOM 1021 OH TYR 133 10.729 82.652 1.317 1.00 2.56 H ATOM 1022 N GLN 134 5.019 80.375 4.621 1.00 2.90 N ATOM 1023 CA GLN 134 4.222 80.231 3.437 1.00 2.90 C ATOM 1024 C GLN 134 3.066 81.169 3.474 1.00 2.90 C ATOM 1025 O GLN 134 2.707 81.754 2.456 1.00 2.90 O ATOM 1026 CB GLN 134 3.621 78.830 3.242 1.00 2.90 C ATOM 1027 CG GLN 134 2.785 78.742 1.960 1.00 2.90 C ATOM 1028 CD GLN 134 2.044 77.414 1.938 1.00 2.90 C ATOM 1029 OE1 GLN 134 1.912 76.782 0.890 1.00 2.90 O ATOM 1030 NE2 GLN 134 1.528 76.987 3.121 1.00 2.90 N ATOM 1031 N VAL 135 2.436 81.321 4.654 1.00 3.46 N ATOM 1032 CA VAL 135 1.270 82.142 4.771 1.00 3.46 C ATOM 1033 C VAL 135 1.599 83.566 4.440 1.00 3.46 C ATOM 1034 O VAL 135 0.861 84.223 3.713 1.00 3.46 O ATOM 1035 CB VAL 135 0.666 82.110 6.150 1.00 3.46 C ATOM 1036 CG1 VAL 135 0.148 80.689 6.430 1.00 3.46 C ATOM 1037 CG2 VAL 135 1.718 82.578 7.167 1.00 3.46 C ATOM 1038 N VAL 136 2.695 84.100 5.003 1.00 3.18 N ATOM 1039 CA VAL 136 3.084 85.468 4.789 1.00 3.18 C ATOM 1040 C VAL 136 3.622 85.717 3.417 1.00 3.18 C ATOM 1041 O VAL 136 3.206 86.663 2.753 1.00 3.18 O ATOM 1042 CB VAL 136 4.140 85.917 5.757 1.00 3.18 C ATOM 1043 CG1 VAL 136 4.638 87.308 5.335 1.00 3.18 C ATOM 1044 CG2 VAL 136 3.539 85.886 7.172 1.00 3.18 C ATOM 1045 N CYS 137 4.565 84.879 2.946 1.00 4.74 N ATOM 1046 CA CYS 137 5.189 85.191 1.689 1.00 4.74 C ATOM 1047 C CYS 137 4.172 85.110 0.580 1.00 4.74 C ATOM 1048 O CYS 137 4.160 85.955 -0.314 1.00 4.74 O ATOM 1049 CB CYS 137 6.396 84.282 1.380 1.00 4.74 C ATOM 1050 SG CYS 137 7.444 84.918 0.034 1.00 4.74 S ATOM 1051 N LYS 138 3.313 84.068 0.603 1.00 5.20 N ATOM 1052 CA LYS 138 2.276 83.786 -0.368 1.00 5.20 C ATOM 1053 C LYS 138 1.073 84.687 -0.241 1.00 5.20 C ATOM 1054 O LYS 138 0.338 84.908 -1.198 1.00 5.20 O ATOM 1055 CB LYS 138 1.780 82.336 -0.246 1.00 5.20 C ATOM 1056 CG LYS 138 0.766 81.929 -1.312 1.00 5.20 C ATOM 1057 CD LYS 138 0.491 80.423 -1.339 1.00 5.20 C ATOM 1058 CE LYS 138 1.514 79.619 -2.144 1.00 5.20 C ATOM 1059 NZ LYS 138 1.284 79.816 -3.590 1.00 5.20 N ATOM 1060 N GLY 139 0.794 85.156 0.980 1.00 5.80 N ATOM 1061 CA GLY 139 -0.264 86.015 1.420 1.00 5.80 C ATOM 1062 C GLY 139 -1.227 85.150 2.165 1.00 5.80 C ATOM 1063 O GLY 139 -1.455 85.316 3.362 1.00 5.80 O ATOM 1064 N GLU 140 -1.799 84.176 1.444 1.00 5.12 N ATOM 1065 CA GLU 140 -2.680 83.173 1.941 1.00 5.12 C ATOM 1066 C GLU 140 -3.002 82.396 0.715 1.00 5.12 C ATOM 1067 O GLU 140 -3.464 82.954 -0.279 1.00 5.12 O ATOM 1068 CB GLU 140 -4.030 83.705 2.441 1.00 5.12 C ATOM 1069 CG GLU 140 -4.967 82.585 2.897 1.00 5.12 C ATOM 1070 CD GLU 140 -6.330 83.193 3.173 1.00 5.12 C ATOM 1071 OE1 GLU 140 -6.374 84.248 3.859 1.00 5.12 O ATOM 1072 OE2 GLU 140 -7.345 82.620 2.698 1.00 5.12 O TER 7142 ILE 887 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 52.71 61.4 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 59.41 58.1 62 100.0 62 ARMSMC BURIED . . . . . . . . 31.43 69.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.58 51.3 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 79.06 50.0 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 82.05 50.0 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 71.14 53.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.10 34.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 77.53 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 84.30 18.8 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 73.26 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.84 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 75.57 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 64.59 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 111.14 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.96 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 89.96 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 64.19 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 126.64 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.39 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.39 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0531 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.71 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.31 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.54 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.87 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.44 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.09 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.33 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.48 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.14 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.91 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.22 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.09 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.678 0.480 0.519 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 2.538 0.439 0.470 32 100.0 32 ERRCA BURIED . . . . . . . . 3.024 0.580 0.641 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.576 0.458 0.494 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.425 0.419 0.445 156 100.0 156 ERRMC BURIED . . . . . . . . 2.938 0.550 0.611 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.351 0.319 0.312 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 2.383 0.315 0.303 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 2.274 0.264 0.227 112 100.0 112 ERRSC BURIED . . . . . . . . 2.514 0.435 0.490 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.479 0.396 0.412 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.363 0.352 0.350 240 100.0 240 ERRALL BURIED . . . . . . . . 2.745 0.495 0.553 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 18 35 37 42 45 45 45 DISTCA CA (P) 40.00 77.78 82.22 93.33 100.00 45 DISTCA CA (RMS) 0.67 1.17 1.25 1.73 2.39 DISTCA ALL (N) 100 196 248 295 330 345 345 DISTALL ALL (P) 28.99 56.81 71.88 85.51 95.65 345 DISTALL ALL (RMS) 0.70 1.14 1.54 2.07 2.98 DISTALL END of the results output