####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS127_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS127_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 98 - 115 4.91 12.50 LONGEST_CONTINUOUS_SEGMENT: 18 99 - 116 4.75 12.47 LCS_AVERAGE: 36.59 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 131 - 137 1.69 15.25 LCS_AVERAGE: 13.09 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 100 - 105 0.74 20.76 LONGEST_CONTINUOUS_SEGMENT: 6 119 - 124 0.89 13.79 LCS_AVERAGE: 10.02 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 6 15 3 3 3 5 7 9 10 10 10 10 11 12 12 15 15 18 22 28 29 30 LCS_GDT A 97 A 97 4 6 16 3 3 4 6 7 9 10 10 10 10 11 12 12 15 16 18 22 28 29 30 LCS_GDT R 98 R 98 4 6 18 3 4 4 6 7 9 10 10 10 10 11 12 16 19 19 24 30 33 35 36 LCS_GDT G 99 G 99 4 6 18 3 4 4 6 7 9 10 12 14 17 19 22 23 25 27 29 30 33 35 36 LCS_GDT W 100 W 100 6 6 18 3 6 6 6 7 9 10 14 15 18 20 22 23 26 28 29 30 33 35 36 LCS_GDT E 101 E 101 6 6 18 4 6 6 6 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT C 102 C 102 6 6 18 4 6 6 6 6 8 11 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT T 103 T 103 6 6 18 4 6 6 6 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT K 104 K 104 6 6 18 4 6 6 6 6 8 9 13 14 19 20 22 23 26 28 29 30 31 34 34 LCS_GDT D 105 D 105 6 6 18 4 6 6 6 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT R 106 R 106 4 5 18 4 4 5 5 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT C 107 C 107 4 5 18 4 4 5 6 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT G 108 G 108 3 5 18 3 3 5 5 7 8 11 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT E 109 E 109 4 6 18 3 3 4 8 9 11 11 13 14 17 18 20 23 26 28 29 30 33 35 36 LCS_GDT V 110 V 110 4 6 18 3 3 5 6 7 8 9 12 14 17 18 20 23 26 28 29 30 33 35 36 LCS_GDT R 111 R 111 4 6 18 3 4 5 5 7 8 10 13 13 17 18 20 23 26 28 29 30 33 35 36 LCS_GDT N 112 N 112 4 6 18 3 4 4 5 7 8 10 12 13 15 18 20 23 26 28 29 30 33 35 36 LCS_GDT E 113 E 113 4 6 18 3 4 4 5 7 8 10 14 15 17 20 22 23 26 28 29 30 33 35 36 LCS_GDT E 114 E 114 4 6 18 3 4 5 5 7 8 10 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT N 115 N 115 3 6 18 3 3 5 6 7 10 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT A 116 A 116 4 6 18 3 5 6 8 9 11 11 13 16 18 20 22 23 26 28 29 30 33 35 36 LCS_GDT C 117 C 117 4 6 17 3 5 6 8 9 11 11 13 16 18 20 21 23 24 27 29 30 33 35 36 LCS_GDT H 118 H 118 4 6 17 3 5 6 8 9 11 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT C 119 C 119 6 6 16 5 5 6 8 9 11 12 13 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT S 120 S 120 6 6 16 5 5 6 6 6 8 12 13 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT E 121 E 121 6 6 16 5 5 6 8 9 11 12 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT D 122 D 122 6 6 16 5 5 6 6 6 8 10 14 16 19 20 22 23 26 28 29 30 32 35 36 LCS_GDT C 123 C 123 6 6 16 5 5 6 6 6 7 10 14 16 19 20 22 23 26 28 29 30 33 35 36 LCS_GDT L 124 L 124 6 6 16 0 4 6 6 6 7 10 14 16 19 20 22 23 26 28 29 30 31 34 34 LCS_GDT S 125 S 125 3 5 16 1 3 3 4 6 7 10 10 13 14 14 17 20 26 28 29 30 30 31 31 LCS_GDT R 126 R 126 3 5 16 0 3 3 5 6 7 10 10 13 15 19 22 23 26 28 29 30 31 34 34 LCS_GDT G 127 G 127 3 5 16 3 3 5 6 7 9 12 14 16 19 20 22 23 25 28 29 30 33 35 36 LCS_GDT D 128 D 128 4 5 16 3 4 5 6 7 10 12 14 16 19 20 22 23 25 28 29 30 33 35 36 LCS_GDT C 129 C 129 4 5 16 3 4 5 6 7 8 10 13 13 16 18 20 23 24 26 28 30 33 35 36 LCS_GDT C 130 C 130 4 5 15 3 4 5 8 9 11 11 13 14 17 18 20 23 24 26 27 30 33 35 36 LCS_GDT T 131 T 131 4 7 15 3 4 5 6 7 8 10 13 13 16 18 20 22 24 26 27 27 28 29 33 LCS_GDT N 132 N 132 5 7 15 5 5 5 6 7 8 10 13 13 17 18 20 23 24 26 27 27 28 29 34 LCS_GDT Y 133 Y 133 5 7 15 5 5 5 6 6 7 10 13 14 17 18 20 23 24 26 27 30 33 35 36 LCS_GDT Q 134 Q 134 5 7 14 5 5 5 6 6 11 11 13 14 17 18 20 23 24 26 27 30 33 35 36 LCS_GDT V 135 V 135 5 7 14 5 5 6 8 9 11 11 13 14 17 18 20 23 24 26 27 30 33 33 35 LCS_GDT V 136 V 136 5 7 14 5 5 6 8 9 11 11 13 14 17 18 20 23 24 26 27 30 33 33 36 LCS_GDT C 137 C 137 4 7 14 3 4 4 6 7 11 11 13 14 17 18 20 23 24 26 27 30 33 35 36 LCS_GDT K 138 K 138 4 5 14 3 4 4 6 7 9 10 10 12 13 17 19 23 24 26 28 30 33 35 36 LCS_GDT G 139 G 139 4 5 14 3 4 4 6 7 9 10 10 10 12 16 18 21 24 26 28 30 33 35 36 LCS_GDT E 140 E 140 4 5 14 3 3 4 4 7 9 10 10 13 14 17 19 21 24 26 28 30 33 35 36 LCS_AVERAGE LCS_A: 19.90 ( 10.02 13.09 36.59 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 6 8 9 11 12 14 16 19 20 22 23 26 28 29 30 33 35 36 GDT PERCENT_AT 11.11 13.33 13.33 17.78 20.00 24.44 26.67 31.11 35.56 42.22 44.44 48.89 51.11 57.78 62.22 64.44 66.67 73.33 77.78 80.00 GDT RMS_LOCAL 0.28 0.74 0.74 1.17 1.36 1.84 2.62 3.12 3.26 3.71 3.74 4.15 4.39 5.12 5.28 5.36 5.50 6.70 6.86 7.00 GDT RMS_ALL_AT 13.34 20.76 20.76 10.65 10.71 10.68 9.83 10.45 10.22 10.47 10.84 10.29 10.35 11.41 11.01 10.85 10.85 8.74 8.77 8.76 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 21.425 0 0.030 1.229 22.914 0.000 0.000 LGA A 97 A 97 19.831 0 0.626 0.576 21.905 0.000 0.000 LGA R 98 R 98 15.721 0 0.521 1.296 24.155 0.000 0.000 LGA G 99 G 99 10.067 0 0.227 0.227 11.869 0.476 0.476 LGA W 100 W 100 8.081 0 0.523 1.113 16.502 13.095 3.844 LGA E 101 E 101 2.187 0 0.093 1.054 5.144 47.619 45.714 LGA C 102 C 102 2.787 0 0.107 0.193 8.232 63.333 47.381 LGA T 103 T 103 2.837 0 0.095 0.558 6.115 71.548 52.313 LGA K 104 K 104 5.588 0 0.631 0.863 14.749 34.881 16.032 LGA D 105 D 105 1.529 0 0.061 0.198 4.939 66.905 56.310 LGA R 106 R 106 3.405 0 0.132 1.302 13.579 57.262 24.719 LGA C 107 C 107 3.223 0 0.631 0.882 6.632 53.810 42.460 LGA G 108 G 108 3.391 0 0.608 0.608 7.581 37.857 37.857 LGA E 109 E 109 8.705 0 0.403 0.886 13.885 6.905 3.069 LGA V 110 V 110 9.672 0 0.494 0.944 11.178 0.238 0.272 LGA R 111 R 111 9.641 0 0.208 1.421 13.082 0.714 0.260 LGA N 112 N 112 9.693 0 0.095 1.072 12.209 1.667 0.833 LGA E 113 E 113 7.917 0 0.637 1.039 8.772 5.476 12.275 LGA E 114 E 114 7.346 0 0.484 0.950 15.146 24.643 11.270 LGA N 115 N 115 3.952 0 0.211 1.120 9.794 42.500 25.774 LGA A 116 A 116 5.290 0 0.099 0.100 7.653 27.976 25.048 LGA C 117 C 117 5.631 0 0.086 0.649 8.864 42.262 30.317 LGA H 118 H 118 3.228 0 0.144 0.526 9.969 36.548 22.381 LGA C 119 C 119 4.507 0 0.613 0.586 6.405 37.857 31.667 LGA S 120 S 120 4.480 0 0.017 0.690 5.527 51.071 41.984 LGA E 121 E 121 1.943 0 0.178 1.385 7.283 71.071 47.619 LGA D 122 D 122 3.817 0 0.260 1.087 9.166 43.810 26.250 LGA C 123 C 123 3.859 0 0.642 0.891 6.461 36.905 40.317 LGA L 124 L 124 5.311 0 0.664 1.133 6.952 24.048 25.774 LGA S 125 S 125 10.835 0 0.613 0.550 12.621 0.357 0.238 LGA R 126 R 126 8.074 0 0.669 1.098 17.054 13.810 5.325 LGA G 127 G 127 2.916 0 0.555 0.555 4.460 52.262 52.262 LGA D 128 D 128 3.425 0 0.301 1.263 7.064 41.905 31.964 LGA C 129 C 129 7.798 0 0.098 0.323 11.688 8.452 5.635 LGA C 130 C 130 10.632 0 0.074 0.732 13.840 0.357 0.238 LGA T 131 T 131 16.580 0 0.238 0.365 20.318 0.000 0.000 LGA N 132 N 132 18.435 0 0.456 1.158 22.306 0.000 0.000 LGA Y 133 Y 133 14.804 0 0.176 1.476 16.733 0.000 0.000 LGA Q 134 Q 134 18.052 0 0.081 0.913 20.393 0.000 0.000 LGA V 135 V 135 20.123 0 0.219 1.159 23.904 0.000 0.000 LGA V 136 V 136 17.014 0 0.609 0.607 18.259 0.000 0.000 LGA C 137 C 137 14.590 0 0.650 0.999 14.743 0.000 0.000 LGA K 138 K 138 11.386 0 0.088 0.663 12.974 0.000 0.370 LGA G 139 G 139 14.104 0 0.669 0.669 14.104 0.000 0.000 LGA E 140 E 140 11.457 0 0.587 1.335 14.845 0.000 6.878 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.634 8.460 9.978 22.614 17.225 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 14 3.12 31.667 27.024 0.435 LGA_LOCAL RMSD: 3.116 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.454 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.634 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.333477 * X + 0.242406 * Y + -0.911061 * Z + -14.324241 Y_new = -0.489639 * X + 0.870352 * Y + 0.052351 * Z + -12.709177 Z_new = 0.805634 * X + 0.428633 * Y + 0.408934 * Z + -89.982239 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.972890 -0.936745 0.808912 [DEG: -55.7425 -53.6716 46.3473 ] ZXZ: -1.628195 1.149510 1.081843 [DEG: -93.2887 65.8621 61.9851 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS127_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS127_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 14 3.12 27.024 8.63 REMARK ---------------------------------------------------------- MOLECULE T0543TS127_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REFINED REMARK PARENT 2GSO_A ATOM 384 N THR 96 -5.588 81.342 20.921 1.00 0.00 N ATOM 385 CA THR 96 -5.293 81.975 22.197 1.00 0.00 C ATOM 386 C THR 96 -3.769 81.933 22.619 1.00 0.00 C ATOM 387 O THR 96 -3.407 82.699 23.523 1.00 0.00 O ATOM 388 CB THR 96 -6.131 81.385 23.335 1.00 0.00 C ATOM 389 OG1 THR 96 -5.673 80.044 23.747 1.00 0.00 O ATOM 390 CG2 THR 96 -7.648 81.383 22.957 1.00 0.00 C ATOM 391 N ALA 97 -3.003 80.907 22.238 1.00 0.00 N ATOM 392 CA ALA 97 -1.612 80.847 22.660 1.00 0.00 C ATOM 393 C ALA 97 -0.569 80.874 21.490 1.00 0.00 C ATOM 394 O ALA 97 0.661 80.894 21.795 1.00 0.00 O ATOM 395 CB ALA 97 -1.471 79.533 23.448 1.00 0.00 C ATOM 396 N ARG 98 -0.945 80.754 20.224 1.00 0.00 N ATOM 397 CA ARG 98 0.056 80.749 19.161 1.00 0.00 C ATOM 398 C ARG 98 -0.059 81.990 18.252 1.00 0.00 C ATOM 399 O ARG 98 -1.046 82.124 17.525 1.00 0.00 O ATOM 400 CB ARG 98 -0.145 79.488 18.324 1.00 0.00 C ATOM 401 CG ARG 98 -0.103 78.208 19.152 1.00 0.00 C ATOM 402 CD ARG 98 -0.054 77.017 18.289 1.00 0.00 C ATOM 403 NE ARG 98 -0.035 75.802 19.037 1.00 0.00 N ATOM 404 CZ ARG 98 0.123 74.581 18.568 1.00 0.00 C ATOM 405 NH1 ARG 98 0.270 74.338 17.282 1.00 0.00 H ATOM 406 NH2 ARG 98 0.158 73.536 19.404 1.00 0.00 H ATOM 407 N GLY 99 0.928 82.843 18.268 1.00 0.00 N ATOM 408 CA GLY 99 0.969 84.003 17.436 1.00 0.00 C ATOM 409 C GLY 99 1.228 83.572 16.027 1.00 0.00 C ATOM 410 O GLY 99 2.105 82.702 15.750 1.00 0.00 O ATOM 411 N TRP 100 0.909 84.435 15.104 1.00 0.00 N ATOM 412 CA TRP 100 1.115 84.152 13.698 1.00 0.00 C ATOM 413 C TRP 100 2.587 84.619 13.401 1.00 0.00 C ATOM 414 O TRP 100 2.834 85.841 13.387 1.00 0.00 O ATOM 415 CB TRP 100 0.034 84.846 12.850 1.00 0.00 C ATOM 416 CG TRP 100 0.113 84.732 11.415 1.00 0.00 C ATOM 417 CD1 TRP 100 -0.670 83.875 10.667 1.00 0.00 C ATOM 418 CD2 TRP 100 0.862 85.525 10.479 1.00 0.00 C ATOM 419 NE1 TRP 100 -0.381 84.057 9.349 1.00 0.00 N ATOM 420 CE2 TRP 100 0.505 85.064 9.183 1.00 0.00 C ATOM 421 CE3 TRP 100 1.800 86.536 10.584 1.00 0.00 C ATOM 422 CZ2 TRP 100 1.117 85.548 8.038 1.00 0.00 C ATOM 423 CZ3 TRP 100 2.369 87.071 9.433 1.00 0.00 C ATOM 424 CH2 TRP 100 2.015 86.610 8.144 1.00 0.00 H ATOM 425 N GLU 101 3.335 83.739 12.737 1.00 0.00 N ATOM 426 CA GLU 101 4.715 84.089 12.487 1.00 0.00 C ATOM 427 C GLU 101 4.873 85.040 11.336 1.00 0.00 C ATOM 428 O GLU 101 4.516 84.743 10.168 1.00 0.00 O ATOM 429 CB GLU 101 5.634 82.878 12.419 1.00 0.00 C ATOM 430 CG GLU 101 6.848 83.067 13.375 1.00 0.00 C ATOM 431 CD GLU 101 6.777 83.271 14.894 1.00 0.00 C ATOM 432 OE1 GLU 101 6.512 84.338 15.561 1.00 0.00 O ATOM 433 OE2 GLU 101 7.113 82.100 15.402 1.00 0.00 O ATOM 434 N CYS 102 5.330 86.214 11.719 1.00 0.00 N ATOM 435 CA CYS 102 5.530 87.355 10.875 1.00 0.00 C ATOM 436 C CYS 102 6.989 87.385 10.440 1.00 0.00 C ATOM 437 O CYS 102 7.870 87.407 11.323 1.00 0.00 O ATOM 438 CB CYS 102 5.154 88.550 11.689 1.00 0.00 C ATOM 439 SG CYS 102 3.455 89.001 11.682 1.00 0.00 S ATOM 440 N THR 103 7.202 87.943 9.254 1.00 0.00 N ATOM 441 CA THR 103 8.535 88.030 8.711 1.00 0.00 C ATOM 442 C THR 103 8.841 89.436 8.151 1.00 0.00 C ATOM 443 O THR 103 7.998 90.052 7.483 1.00 0.00 O ATOM 444 CB THR 103 8.702 87.031 7.521 1.00 0.00 C ATOM 445 OG1 THR 103 8.784 87.548 6.206 1.00 0.00 O ATOM 446 CG2 THR 103 7.759 85.814 7.543 1.00 0.00 C ATOM 447 N LYS 104 10.053 89.841 8.298 1.00 0.00 N ATOM 448 CA LYS 104 10.638 91.053 7.757 1.00 0.00 C ATOM 449 C LYS 104 10.351 91.125 6.237 1.00 0.00 C ATOM 450 O LYS 104 10.313 90.077 5.577 1.00 0.00 O ATOM 451 CB LYS 104 12.062 91.027 8.209 1.00 0.00 C ATOM 452 CG LYS 104 13.112 92.022 7.990 1.00 0.00 C ATOM 453 CD LYS 104 14.408 91.290 8.479 1.00 0.00 C ATOM 454 CE LYS 104 15.758 92.024 8.176 1.00 0.00 C ATOM 455 NZ LYS 104 16.909 91.107 8.216 1.00 0.00 N ATOM 456 N ASP 105 9.883 92.256 5.727 1.00 0.00 N ATOM 457 CA ASP 105 9.634 92.395 4.268 1.00 0.00 C ATOM 458 C ASP 105 10.788 91.759 3.424 1.00 0.00 C ATOM 459 O ASP 105 10.472 91.357 2.315 1.00 0.00 O ATOM 460 CB ASP 105 9.423 93.898 3.979 1.00 0.00 C ATOM 461 CG ASP 105 10.575 94.848 4.453 1.00 0.00 C ATOM 462 OD1 ASP 105 10.897 94.879 5.655 1.00 0.00 O ATOM 463 OD2 ASP 105 11.134 95.586 3.617 1.00 0.00 O ATOM 464 N ARG 106 12.063 92.086 3.715 1.00 0.00 N ATOM 465 CA ARG 106 13.233 91.498 3.078 1.00 0.00 C ATOM 466 C ARG 106 13.088 89.964 3.012 1.00 0.00 C ATOM 467 O ARG 106 13.612 89.387 2.055 1.00 0.00 O ATOM 468 CB ARG 106 14.468 91.967 3.872 1.00 0.00 C ATOM 469 CG ARG 106 14.842 93.400 3.582 1.00 0.00 C ATOM 470 CD ARG 106 16.345 93.551 3.596 1.00 0.00 C ATOM 471 NE ARG 106 16.686 94.962 3.771 1.00 0.00 N ATOM 472 CZ ARG 106 17.195 95.709 2.772 1.00 0.00 C ATOM 473 NH1 ARG 106 17.456 95.236 1.560 1.00 0.00 H ATOM 474 NH2 ARG 106 17.422 96.994 3.025 1.00 0.00 H ATOM 475 N CYS 107 12.728 89.300 4.111 1.00 0.00 N ATOM 476 CA CYS 107 12.475 87.866 4.140 1.00 0.00 C ATOM 477 C CYS 107 11.593 87.392 2.954 1.00 0.00 C ATOM 478 O CYS 107 11.929 86.370 2.347 1.00 0.00 O ATOM 479 CB CYS 107 11.808 87.542 5.490 1.00 0.00 C ATOM 480 SG CYS 107 12.327 85.941 6.289 1.00 0.00 S ATOM 481 N GLY 108 10.552 88.181 2.555 1.00 0.00 N ATOM 482 CA GLY 108 9.607 87.903 1.497 1.00 0.00 C ATOM 483 C GLY 108 8.905 86.560 1.795 1.00 0.00 C ATOM 484 O GLY 108 8.244 86.474 2.845 1.00 0.00 O ATOM 485 N GLU 109 8.738 85.726 0.778 1.00 0.00 N ATOM 486 CA GLU 109 8.108 84.446 1.065 1.00 0.00 C ATOM 487 C GLU 109 9.030 83.735 2.030 1.00 0.00 C ATOM 488 O GLU 109 8.824 83.963 3.221 1.00 0.00 O ATOM 489 CB GLU 109 7.818 83.685 -0.239 1.00 0.00 C ATOM 490 CG GLU 109 6.379 83.149 -0.351 1.00 0.00 C ATOM 491 CD GLU 109 6.114 82.854 -1.834 1.00 0.00 C ATOM 492 OE1 GLU 109 6.678 81.972 -2.435 1.00 0.00 O ATOM 493 OE2 GLU 109 5.382 83.723 -2.332 1.00 0.00 O ATOM 494 N VAL 110 10.076 83.050 1.591 1.00 0.00 N ATOM 495 CA VAL 110 11.102 82.392 2.439 1.00 0.00 C ATOM 496 C VAL 110 10.409 82.084 3.810 1.00 0.00 C ATOM 497 O VAL 110 10.062 80.963 3.955 1.00 0.00 O ATOM 498 CB VAL 110 12.408 83.106 2.462 1.00 0.00 C ATOM 499 CG1 VAL 110 13.373 82.541 3.538 1.00 0.00 C ATOM 500 CG2 VAL 110 13.071 83.295 1.147 1.00 0.00 C ATOM 501 N ARG 111 10.934 82.731 4.851 1.00 0.00 N ATOM 502 CA ARG 111 10.385 82.775 6.208 1.00 0.00 C ATOM 503 C ARG 111 11.441 83.177 7.313 1.00 0.00 C ATOM 504 O ARG 111 12.572 83.393 7.020 1.00 0.00 O ATOM 505 CB ARG 111 9.403 81.742 6.609 1.00 0.00 C ATOM 506 CG ARG 111 8.195 81.705 7.381 1.00 0.00 C ATOM 507 CD ARG 111 8.425 82.035 8.820 1.00 0.00 C ATOM 508 NE ARG 111 7.510 81.333 9.703 1.00 0.00 N ATOM 509 CZ ARG 111 7.814 80.127 10.200 1.00 0.00 C ATOM 510 NH1 ARG 111 8.947 79.487 9.884 1.00 0.00 H ATOM 511 NH2 ARG 111 7.044 79.616 11.164 1.00 0.00 H ATOM 512 N ASN 112 11.037 83.302 8.580 1.00 0.00 N ATOM 513 CA ASN 112 11.914 83.699 9.697 1.00 0.00 C ATOM 514 C ASN 112 12.655 82.525 10.349 1.00 0.00 C ATOM 515 O ASN 112 12.170 81.398 10.523 1.00 0.00 O ATOM 516 CB ASN 112 10.997 84.384 10.733 1.00 0.00 C ATOM 517 CG ASN 112 10.226 85.562 10.262 1.00 0.00 C ATOM 518 OD1 ASN 112 9.056 85.424 9.899 1.00 0.00 O ATOM 519 ND2 ASN 112 10.805 86.756 10.243 1.00 0.00 N ATOM 520 N GLU 113 13.800 82.907 10.885 1.00 0.00 N ATOM 521 CA GLU 113 14.734 82.043 11.668 1.00 0.00 C ATOM 522 C GLU 113 14.507 82.361 13.182 1.00 0.00 C ATOM 523 O GLU 113 13.380 82.775 13.522 1.00 0.00 O ATOM 524 CB GLU 113 16.214 82.249 11.239 1.00 0.00 C ATOM 525 CG GLU 113 17.324 81.829 12.235 1.00 0.00 C ATOM 526 CD GLU 113 18.654 81.255 11.715 1.00 0.00 C ATOM 527 OE1 GLU 113 19.106 81.541 10.601 1.00 0.00 O ATOM 528 OE2 GLU 113 19.244 80.492 12.478 1.00 0.00 O ATOM 529 N GLU 114 15.273 81.780 14.086 1.00 0.00 N ATOM 530 CA GLU 114 15.095 82.134 15.468 1.00 0.00 C ATOM 531 C GLU 114 15.654 83.555 15.643 1.00 0.00 C ATOM 532 O GLU 114 16.839 83.737 15.975 1.00 0.00 O ATOM 533 CB GLU 114 15.734 81.090 16.402 1.00 0.00 C ATOM 534 CG GLU 114 15.115 81.091 17.842 1.00 0.00 C ATOM 535 CD GLU 114 13.841 80.296 17.927 1.00 0.00 C ATOM 536 OE1 GLU 114 13.403 79.746 16.863 1.00 0.00 O ATOM 537 OE2 GLU 114 13.246 80.269 19.043 1.00 0.00 O ATOM 538 N ASN 115 14.690 84.452 15.652 1.00 0.00 N ATOM 539 CA ASN 115 14.947 85.883 15.844 1.00 0.00 C ATOM 540 C ASN 115 15.855 86.554 14.794 1.00 0.00 C ATOM 541 O ASN 115 17.080 86.360 14.820 1.00 0.00 O ATOM 542 CB ASN 115 15.503 86.127 17.246 1.00 0.00 C ATOM 543 CG ASN 115 15.054 85.270 18.401 1.00 0.00 C ATOM 544 OD1 ASN 115 15.739 84.320 18.825 1.00 0.00 O ATOM 545 ND2 ASN 115 13.871 85.566 18.943 1.00 0.00 N ATOM 546 N ALA 116 15.214 87.029 13.693 1.00 0.00 N ATOM 547 CA ALA 116 15.807 87.809 12.593 1.00 0.00 C ATOM 548 C ALA 116 16.422 87.065 11.348 1.00 0.00 C ATOM 549 O ALA 116 16.109 87.531 10.239 1.00 0.00 O ATOM 550 CB ALA 116 16.902 88.731 13.168 1.00 0.00 C ATOM 551 N CYS 117 17.260 86.040 11.447 1.00 0.00 N ATOM 552 CA CYS 117 17.806 85.461 10.185 1.00 0.00 C ATOM 553 C CYS 117 16.693 85.058 9.157 1.00 0.00 C ATOM 554 O CYS 117 15.564 84.776 9.550 1.00 0.00 O ATOM 555 CB CYS 117 18.650 84.270 10.480 1.00 0.00 C ATOM 556 SG CYS 117 19.756 84.550 11.859 1.00 0.00 S ATOM 557 N HIS 118 16.880 85.473 7.923 1.00 0.00 N ATOM 558 CA HIS 118 16.037 85.192 6.788 1.00 0.00 C ATOM 559 C HIS 118 16.415 83.763 6.292 1.00 0.00 C ATOM 560 O HIS 118 17.588 83.502 5.960 1.00 0.00 O ATOM 561 CB HIS 118 16.478 86.191 5.722 1.00 0.00 C ATOM 562 CG HIS 118 15.855 87.564 5.821 1.00 0.00 C ATOM 563 ND1 HIS 118 16.257 88.647 5.046 1.00 0.00 N ATOM 564 CD2 HIS 118 14.937 88.073 6.658 1.00 0.00 C ATOM 565 CE1 HIS 118 15.523 89.669 5.345 1.00 0.00 C ATOM 566 NE2 HIS 118 14.709 89.381 6.368 1.00 0.00 N ATOM 567 N CYS 119 15.413 82.967 5.988 1.00 0.00 N ATOM 568 CA CYS 119 15.622 81.576 5.530 1.00 0.00 C ATOM 569 C CYS 119 16.204 81.542 4.080 1.00 0.00 C ATOM 570 O CYS 119 16.376 82.569 3.404 1.00 0.00 O ATOM 571 CB CYS 119 14.264 80.851 5.567 1.00 0.00 C ATOM 572 SG CYS 119 13.825 80.074 7.113 1.00 0.00 S ATOM 573 N SER 120 16.677 80.353 3.726 1.00 0.00 N ATOM 574 CA SER 120 17.283 80.172 2.425 1.00 0.00 C ATOM 575 C SER 120 16.334 80.669 1.321 1.00 0.00 C ATOM 576 O SER 120 15.127 80.862 1.491 1.00 0.00 O ATOM 577 CB SER 120 17.828 78.748 2.238 1.00 0.00 C ATOM 578 OG SER 120 18.552 78.536 1.001 1.00 0.00 O ATOM 579 N GLU 121 16.994 81.294 0.353 1.00 0.00 N ATOM 580 CA GLU 121 16.402 81.933 -0.844 1.00 0.00 C ATOM 581 C GLU 121 15.404 81.004 -1.458 1.00 0.00 C ATOM 582 O GLU 121 14.323 81.522 -1.802 1.00 0.00 O ATOM 583 CB GLU 121 17.541 82.317 -1.745 1.00 0.00 C ATOM 584 CG GLU 121 17.207 82.980 -3.059 1.00 0.00 C ATOM 585 CD GLU 121 18.213 82.678 -4.171 1.00 0.00 C ATOM 586 OE1 GLU 121 19.386 82.437 -3.872 1.00 0.00 O ATOM 587 OE2 GLU 121 17.827 82.676 -5.347 1.00 0.00 O ATOM 588 N ASP 122 15.785 79.795 -1.879 1.00 0.00 N ATOM 589 CA ASP 122 14.775 78.896 -2.350 1.00 0.00 C ATOM 590 C ASP 122 14.176 78.147 -1.089 1.00 0.00 C ATOM 591 O ASP 122 14.098 76.914 -1.135 1.00 0.00 O ATOM 592 CB ASP 122 15.224 77.977 -3.439 1.00 0.00 C ATOM 593 CG ASP 122 15.572 78.540 -4.742 1.00 0.00 C ATOM 594 OD1 ASP 122 15.208 79.694 -5.034 1.00 0.00 O ATOM 595 OD2 ASP 122 16.170 77.780 -5.537 1.00 0.00 O ATOM 596 N CYS 123 13.376 78.882 -0.284 1.00 0.00 N ATOM 597 CA CYS 123 12.695 78.208 0.772 1.00 0.00 C ATOM 598 C CYS 123 11.310 78.840 0.926 1.00 0.00 C ATOM 599 O CYS 123 11.059 79.980 0.493 1.00 0.00 O ATOM 600 CB CYS 123 13.441 78.317 2.075 1.00 0.00 C ATOM 601 SG CYS 123 15.046 77.535 2.073 1.00 0.00 S ATOM 602 N LEU 124 10.302 78.170 1.523 1.00 0.00 N ATOM 603 CA LEU 124 9.020 78.838 1.856 1.00 0.00 C ATOM 604 C LEU 124 8.845 78.730 3.392 1.00 0.00 C ATOM 605 O LEU 124 9.154 77.596 3.840 1.00 0.00 O ATOM 606 CB LEU 124 7.857 78.193 1.165 1.00 0.00 C ATOM 607 CG LEU 124 6.499 78.714 1.509 1.00 0.00 C ATOM 608 CD1 LEU 124 5.597 78.911 0.282 1.00 0.00 C ATOM 609 CD2 LEU 124 5.738 77.766 2.433 1.00 0.00 C ATOM 610 N SER 125 7.986 79.388 4.153 1.00 0.00 N ATOM 611 CA SER 125 7.993 79.205 5.691 1.00 0.00 C ATOM 612 C SER 125 9.346 78.863 6.537 1.00 0.00 C ATOM 613 O SER 125 10.392 79.094 5.983 1.00 0.00 O ATOM 614 CB SER 125 6.906 78.163 6.096 1.00 0.00 C ATOM 615 OG SER 125 7.217 76.746 5.858 1.00 0.00 O ATOM 616 N ARG 126 9.313 77.830 7.456 1.00 0.00 N ATOM 617 CA ARG 126 10.403 77.472 8.397 1.00 0.00 C ATOM 618 C ARG 126 11.602 76.768 7.727 1.00 0.00 C ATOM 619 O ARG 126 11.680 76.832 6.503 1.00 0.00 O ATOM 620 CB ARG 126 9.834 76.526 9.442 1.00 0.00 C ATOM 621 CG ARG 126 10.786 76.312 10.639 1.00 0.00 C ATOM 622 CD ARG 126 9.999 75.725 11.769 1.00 0.00 C ATOM 623 NE ARG 126 10.121 76.573 12.955 1.00 0.00 N ATOM 624 CZ ARG 126 8.997 77.057 13.521 1.00 0.00 C ATOM 625 NH1 ARG 126 7.792 76.777 13.016 1.00 0.00 H ATOM 626 NH2 ARG 126 9.127 77.837 14.603 1.00 0.00 H ATOM 627 N GLY 127 12.754 76.848 8.460 1.00 0.00 N ATOM 628 CA GLY 127 14.026 76.229 8.136 1.00 0.00 C ATOM 629 C GLY 127 14.811 76.029 9.431 1.00 0.00 C ATOM 630 O GLY 127 14.637 76.790 10.407 1.00 0.00 O ATOM 631 N ASP 128 15.855 75.188 9.422 1.00 0.00 N ATOM 632 CA ASP 128 16.662 74.935 10.659 1.00 0.00 C ATOM 633 C ASP 128 17.588 76.161 11.025 1.00 0.00 C ATOM 634 O ASP 128 17.732 76.454 12.212 1.00 0.00 O ATOM 635 CB ASP 128 17.524 73.695 10.502 1.00 0.00 C ATOM 636 CG ASP 128 16.784 72.407 10.549 1.00 0.00 C ATOM 637 OD1 ASP 128 15.567 72.247 10.677 1.00 0.00 O ATOM 638 OD2 ASP 128 17.455 71.380 10.337 1.00 0.00 O ATOM 639 N CYS 129 18.178 76.713 9.980 1.00 0.00 N ATOM 640 CA CYS 129 19.027 77.869 9.985 1.00 0.00 C ATOM 641 C CYS 129 18.964 78.474 8.555 1.00 0.00 C ATOM 642 O CYS 129 18.538 77.775 7.597 1.00 0.00 O ATOM 643 CB CYS 129 20.461 77.475 10.386 1.00 0.00 C ATOM 644 SG CYS 129 20.619 77.144 12.136 1.00 0.00 S ATOM 645 N CYS 130 19.566 79.620 8.347 1.00 0.00 N ATOM 646 CA CYS 130 19.575 80.354 7.079 1.00 0.00 C ATOM 647 C CYS 130 20.738 79.904 6.135 1.00 0.00 C ATOM 648 O CYS 130 21.782 79.411 6.590 1.00 0.00 O ATOM 649 CB CYS 130 19.761 81.838 7.459 1.00 0.00 C ATOM 650 SG CYS 130 21.183 82.220 8.527 1.00 0.00 S ATOM 651 N THR 131 20.611 80.307 4.861 1.00 0.00 N ATOM 652 CA THR 131 21.529 80.020 3.751 1.00 0.00 C ATOM 653 C THR 131 21.839 78.499 3.543 1.00 0.00 C ATOM 654 O THR 131 22.933 78.177 3.025 1.00 0.00 O ATOM 655 CB THR 131 22.868 80.809 3.843 1.00 0.00 C ATOM 656 OG1 THR 131 23.880 80.153 4.596 1.00 0.00 O ATOM 657 CG2 THR 131 22.611 82.258 4.271 1.00 0.00 C ATOM 658 N ASN 132 20.968 77.574 3.905 1.00 0.00 N ATOM 659 CA ASN 132 21.107 76.170 3.746 1.00 0.00 C ATOM 660 C ASN 132 19.730 75.663 3.316 1.00 0.00 C ATOM 661 O ASN 132 18.900 75.352 4.195 1.00 0.00 O ATOM 662 CB ASN 132 21.698 75.492 4.982 1.00 0.00 C ATOM 663 CG ASN 132 21.818 73.999 4.937 1.00 0.00 C ATOM 664 OD1 ASN 132 21.046 73.328 4.251 1.00 0.00 O ATOM 665 ND2 ASN 132 22.771 73.444 5.669 1.00 0.00 N ATOM 666 N TYR 133 19.747 75.117 2.130 1.00 0.00 N ATOM 667 CA TYR 133 18.576 74.506 1.558 1.00 0.00 C ATOM 668 C TYR 133 18.291 73.143 2.218 1.00 0.00 C ATOM 669 O TYR 133 17.137 72.730 2.163 1.00 0.00 O ATOM 670 CB TYR 133 18.814 74.447 0.064 1.00 0.00 C ATOM 671 CG TYR 133 20.162 73.834 -0.294 1.00 0.00 C ATOM 672 CD1 TYR 133 20.348 72.450 -0.414 1.00 0.00 C ATOM 673 CD2 TYR 133 21.226 74.684 -0.441 1.00 0.00 C ATOM 674 CE1 TYR 133 21.600 71.921 -0.688 1.00 0.00 C ATOM 675 CE2 TYR 133 22.510 74.144 -0.716 1.00 0.00 C ATOM 676 CZ TYR 133 22.682 72.776 -0.846 1.00 0.00 C ATOM 677 OH TYR 133 23.934 72.213 -1.187 1.00 0.00 H ATOM 678 N GLN 134 19.321 72.310 2.196 1.00 0.00 N ATOM 679 CA GLN 134 19.337 70.991 2.788 1.00 0.00 C ATOM 680 C GLN 134 18.642 70.996 4.147 1.00 0.00 C ATOM 681 O GLN 134 17.816 70.098 4.408 1.00 0.00 O ATOM 682 CB GLN 134 20.796 70.548 2.906 1.00 0.00 C ATOM 683 CG GLN 134 21.020 69.156 2.352 1.00 0.00 C ATOM 684 CD GLN 134 21.016 68.137 3.472 1.00 0.00 C ATOM 685 OE1 GLN 134 22.046 67.801 4.064 1.00 0.00 O ATOM 686 NE2 GLN 134 19.842 67.624 3.809 1.00 0.00 N ATOM 687 N VAL 135 18.926 71.961 5.051 1.00 0.00 N ATOM 688 CA VAL 135 18.292 72.126 6.371 1.00 0.00 C ATOM 689 C VAL 135 16.973 72.973 6.365 1.00 0.00 C ATOM 690 O VAL 135 16.327 72.990 7.417 1.00 0.00 O ATOM 691 CB VAL 135 19.275 72.864 7.241 1.00 0.00 C ATOM 692 CG1 VAL 135 20.430 71.939 7.752 1.00 0.00 C ATOM 693 CG2 VAL 135 19.738 74.232 6.905 1.00 0.00 C ATOM 694 N VAL 136 16.344 73.285 5.208 1.00 0.00 N ATOM 695 CA VAL 136 15.151 74.076 5.223 1.00 0.00 C ATOM 696 C VAL 136 13.977 73.317 4.517 1.00 0.00 C ATOM 697 O VAL 136 14.107 72.600 3.522 1.00 0.00 O ATOM 698 CB VAL 136 15.306 75.437 4.636 1.00 0.00 C ATOM 699 CG1 VAL 136 14.045 76.338 4.674 1.00 0.00 C ATOM 700 CG2 VAL 136 16.447 76.218 5.332 1.00 0.00 C ATOM 701 N CYS 137 12.794 73.465 5.177 1.00 0.00 N ATOM 702 CA CYS 137 11.515 72.898 4.798 1.00 0.00 C ATOM 703 C CYS 137 10.783 73.791 3.745 1.00 0.00 C ATOM 704 O CYS 137 11.295 74.806 3.274 1.00 0.00 O ATOM 705 CB CYS 137 10.678 72.633 6.080 1.00 0.00 C ATOM 706 SG CYS 137 9.968 74.188 6.679 1.00 0.00 S ATOM 707 N LYS 138 9.867 73.115 3.054 1.00 0.00 N ATOM 708 CA LYS 138 8.889 73.548 2.013 1.00 0.00 C ATOM 709 C LYS 138 9.426 74.441 0.922 1.00 0.00 C ATOM 710 O LYS 138 8.628 75.274 0.465 1.00 0.00 O ATOM 711 CB LYS 138 7.742 74.236 2.793 1.00 0.00 C ATOM 712 CG LYS 138 6.459 73.519 2.985 1.00 0.00 C ATOM 713 CD LYS 138 5.519 73.491 1.780 1.00 0.00 C ATOM 714 CE LYS 138 4.073 73.300 2.271 1.00 0.00 C ATOM 715 NZ LYS 138 3.197 72.749 1.231 1.00 0.00 N ATOM 716 N GLY 139 10.471 74.127 0.119 1.00 0.00 N ATOM 717 CA GLY 139 10.932 75.108 -0.876 1.00 0.00 C ATOM 718 C GLY 139 9.866 75.481 -1.952 1.00 0.00 C ATOM 719 O GLY 139 9.012 74.638 -2.312 1.00 0.00 O ATOM 720 N GLU 140 9.847 76.764 -2.417 1.00 0.00 N ATOM 721 CA GLU 140 8.886 77.176 -3.493 1.00 0.00 C ATOM 722 C GLU 140 9.627 76.925 -4.821 1.00 0.00 C ATOM 723 O GLU 140 9.460 77.663 -5.806 1.00 0.00 O ATOM 724 CB GLU 140 8.415 78.622 -3.329 1.00 0.00 C ATOM 725 CG GLU 140 7.340 79.271 -4.251 1.00 0.00 C ATOM 726 CD GLU 140 5.864 78.818 -4.202 1.00 0.00 C ATOM 727 OE1 GLU 140 5.537 77.831 -3.541 1.00 0.00 O ATOM 728 OE2 GLU 140 5.017 79.453 -4.835 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 89.64 31.8 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 95.19 33.9 62 100.0 62 ARMSMC BURIED . . . . . . . . 74.77 26.9 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.60 23.1 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 97.02 22.2 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 96.82 23.1 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 96.15 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.78 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 75.78 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 84.50 43.8 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 75.18 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.03 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 71.39 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 57.75 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 100.69 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.87 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 87.87 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 55.01 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 130.80 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.63 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.63 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1919 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 8.94 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.83 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.78 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.09 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.99 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.54 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 11.59 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 11.82 112 100.0 112 CRMSSC BURIED . . . . . . . . 10.92 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.05 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 10.29 240 100.0 240 CRMSALL BURIED . . . . . . . . 9.47 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.067 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 8.348 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 7.377 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.182 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 8.467 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 7.498 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.967 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 11.001 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 11.209 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 10.456 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.354 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 9.570 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 8.860 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 8 34 45 45 DISTCA CA (P) 0.00 0.00 0.00 17.78 75.56 45 DISTCA CA (RMS) 0.00 0.00 0.00 4.01 6.93 DISTCA ALL (N) 0 0 5 45 199 345 345 DISTALL ALL (P) 0.00 0.00 1.45 13.04 57.68 345 DISTALL ALL (RMS) 0.00 0.00 2.68 3.88 7.06 DISTALL END of the results output