####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS104_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS104_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 1.98 1.98 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 1.98 1.98 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.88 2.05 LCS_AVERAGE: 43.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 45 45 3 12 14 27 37 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 45 45 3 3 9 14 20 37 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 45 45 3 3 4 5 11 23 37 41 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 13 45 45 4 25 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 13 45 45 11 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 13 45 45 5 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 13 45 45 5 19 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 13 45 45 5 16 34 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 13 45 45 10 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 13 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 13 45 45 3 5 9 27 36 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 13 45 45 4 24 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 5 45 45 3 5 14 20 32 38 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 45 45 4 24 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 45 45 8 25 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 45 45 9 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 45 45 6 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 45 45 4 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 45 45 7 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 45 45 4 21 34 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 45 45 4 25 34 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 45 45 4 26 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 45 45 8 26 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 45 45 10 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 45 45 8 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 45 45 11 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 45 45 10 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 45 45 10 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 45 45 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 45 45 12 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 45 45 10 26 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 45 45 4 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 45 45 0 2 3 4 5 6 8 29 37 43 44 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 81.07 ( 43.21 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 27 35 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 31.11 60.00 77.78 86.67 86.67 88.89 93.33 93.33 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.64 0.88 1.00 1.00 1.12 1.42 1.42 1.57 1.76 1.76 1.98 1.98 1.98 1.98 1.98 1.98 1.98 1.98 1.98 GDT RMS_ALL_AT 2.14 2.13 2.05 2.03 2.03 2.02 2.05 2.05 2.02 2.00 2.00 1.98 1.98 1.98 1.98 1.98 1.98 1.98 1.98 1.98 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 114 E 114 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 3.430 0 0.204 1.158 6.227 52.857 41.701 LGA A 97 A 97 4.756 0 0.093 0.132 7.153 30.238 26.190 LGA R 98 R 98 5.946 0 0.610 1.293 13.562 25.119 10.649 LGA G 99 G 99 1.458 0 0.273 0.273 2.548 79.881 79.881 LGA W 100 W 100 0.785 0 0.157 0.373 4.496 86.071 62.857 LGA E 101 E 101 0.444 0 0.056 1.035 2.683 90.833 79.259 LGA C 102 C 102 0.809 0 0.073 0.664 1.602 90.476 87.540 LGA T 103 T 103 1.255 0 0.032 1.226 4.206 81.429 72.721 LGA K 104 K 104 1.464 0 0.045 0.772 3.308 77.143 71.323 LGA D 105 D 105 1.569 0 0.156 0.956 4.377 75.000 64.643 LGA R 106 R 106 0.709 0 0.127 0.636 3.092 90.476 83.203 LGA C 107 C 107 1.453 0 0.054 0.168 1.748 83.690 80.079 LGA G 108 G 108 0.667 0 0.100 0.100 1.012 92.976 92.976 LGA E 109 E 109 0.781 0 0.082 0.830 3.787 88.214 70.794 LGA V 110 V 110 0.947 0 0.653 0.964 3.776 78.095 70.612 LGA R 111 R 111 2.949 0 0.096 1.035 14.778 59.524 24.502 LGA N 112 N 112 1.329 0 0.055 1.260 6.883 81.548 55.238 LGA E 113 E 113 4.290 0 0.214 1.208 11.596 48.571 23.704 LGA E 114 E 114 1.312 0 0.517 0.906 7.044 75.119 52.222 LGA N 115 N 115 1.355 0 0.057 0.101 1.691 83.690 81.488 LGA A 116 A 116 1.346 0 0.054 0.077 1.709 83.690 81.524 LGA C 117 C 117 0.470 0 0.096 0.701 2.551 92.857 86.508 LGA H 118 H 118 0.884 0 0.125 1.107 2.815 88.214 81.810 LGA C 119 C 119 0.757 0 0.211 0.364 1.199 88.214 87.460 LGA S 120 S 120 0.363 0 0.023 0.105 0.848 95.238 93.651 LGA E 121 E 121 1.093 0 0.077 0.799 3.543 85.952 72.857 LGA D 122 D 122 0.340 0 0.210 1.093 3.747 97.619 83.750 LGA C 123 C 123 0.386 0 0.063 0.120 1.237 92.976 93.730 LGA L 124 L 124 1.815 0 0.060 0.927 5.111 72.976 60.417 LGA S 125 S 125 1.936 0 0.212 0.691 3.681 66.905 63.968 LGA R 126 R 126 1.683 0 0.144 1.100 3.214 70.833 72.511 LGA G 127 G 127 1.134 0 0.152 0.152 1.360 81.429 81.429 LGA D 128 D 128 1.035 0 0.139 0.705 2.585 79.286 74.167 LGA C 129 C 129 1.112 0 0.039 0.224 1.132 83.690 84.444 LGA C 130 C 130 0.795 0 0.059 0.085 1.206 88.214 87.460 LGA T 131 T 131 0.633 0 0.147 1.184 3.474 97.619 86.258 LGA N 132 N 132 0.794 0 0.056 1.014 3.711 92.857 79.226 LGA Y 133 Y 133 0.384 0 0.065 0.471 1.153 97.619 92.143 LGA Q 134 Q 134 1.090 0 0.077 0.435 3.935 83.690 70.899 LGA V 135 V 135 1.215 0 0.039 1.185 3.804 85.952 77.347 LGA V 136 V 136 0.676 0 0.102 1.040 2.928 95.238 84.762 LGA C 137 C 137 0.591 0 0.156 0.186 1.418 90.476 88.968 LGA K 138 K 138 1.115 0 0.163 0.805 6.626 83.810 60.212 LGA G 139 G 139 1.231 0 0.723 0.723 4.700 63.333 63.333 LGA E 140 E 140 6.832 0 0.307 0.592 11.004 14.881 8.466 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 1.980 2.000 3.497 78.767 69.975 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.42 85.000 91.559 2.758 LGA_LOCAL RMSD: 1.423 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.053 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 1.980 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.221336 * X + -0.791798 * Y + 0.569268 * Z + -10.814096 Y_new = -0.823590 * X + -0.160823 * Y + -0.543908 * Z + 246.434845 Z_new = 0.522217 * X + -0.589230 * Y + -0.616521 * Z + 74.970848 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.833338 -0.549448 -2.378825 [DEG: -105.0425 -31.4811 -136.2966 ] ZXZ: 0.808176 2.235113 2.416415 [DEG: 46.3051 128.0625 138.4504 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS104_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS104_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.42 91.559 1.98 REMARK ---------------------------------------------------------- MOLECULE T0543TS104_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 16.677 88.785 18.347 1.00190.17 N ATOM 729 CA THR 96 17.375 87.617 18.829 1.00190.17 C ATOM 730 CB THR 96 18.504 87.970 19.751 1.00190.17 C ATOM 731 OG1 THR 96 18.014 88.647 20.900 1.00190.17 O ATOM 732 CG2 THR 96 19.495 88.864 18.989 1.00190.17 C ATOM 733 C THR 96 16.543 86.597 19.542 1.00190.17 C ATOM 734 O THR 96 16.541 85.431 19.147 1.00190.17 O ATOM 735 N ALA 97 15.817 86.966 20.610 1.00 87.35 N ATOM 736 CA ALA 97 15.077 85.928 21.268 1.00 87.35 C ATOM 737 CB ALA 97 15.343 85.852 22.779 1.00 87.35 C ATOM 738 C ALA 97 13.643 86.277 21.099 1.00 87.35 C ATOM 739 O ALA 97 13.213 87.307 21.611 1.00 87.35 O ATOM 740 N ARG 98 12.869 85.432 20.382 1.00292.32 N ATOM 741 CA ARG 98 11.483 85.752 20.168 1.00292.32 C ATOM 742 CB ARG 98 11.132 87.226 19.865 1.00292.32 C ATOM 743 CG ARG 98 10.636 88.038 21.061 1.00292.32 C ATOM 744 CD ARG 98 9.135 87.853 21.289 1.00292.32 C ATOM 745 NE ARG 98 8.445 88.270 20.034 1.00292.32 N ATOM 746 CZ ARG 98 7.525 87.447 19.454 1.00292.32 C ATOM 747 NH1 ARG 98 7.257 86.227 20.010 1.00292.32 N ATOM 748 NH2 ARG 98 6.878 87.830 18.315 1.00292.32 N ATOM 749 C ARG 98 10.921 85.072 18.974 1.00292.32 C ATOM 750 O ARG 98 11.043 83.870 18.747 1.00292.32 O ATOM 751 N GLY 99 10.278 85.951 18.183 1.00238.31 N ATOM 752 CA GLY 99 9.410 85.747 17.064 1.00238.31 C ATOM 753 C GLY 99 9.864 84.764 16.024 1.00238.31 C ATOM 754 O GLY 99 10.928 84.887 15.424 1.00238.31 O ATOM 755 N TRP 100 8.987 83.752 15.815 1.00306.70 N ATOM 756 CA TRP 100 8.988 82.697 14.835 1.00306.70 C ATOM 757 CB TRP 100 8.038 81.551 15.208 1.00306.70 C ATOM 758 CG TRP 100 8.518 80.768 16.404 1.00306.70 C ATOM 759 CD2 TRP 100 9.231 79.527 16.315 1.00306.70 C ATOM 760 CD1 TRP 100 8.396 81.050 17.733 1.00306.70 C ATOM 761 NE1 TRP 100 8.997 80.063 18.479 1.00306.70 N ATOM 762 CE2 TRP 100 9.512 79.119 17.618 1.00306.70 C ATOM 763 CE3 TRP 100 9.619 78.789 15.233 1.00306.70 C ATOM 764 CZ2 TRP 100 10.191 77.960 17.860 1.00306.70 C ATOM 765 CZ3 TRP 100 10.303 77.620 15.482 1.00306.70 C ATOM 766 CH2 TRP 100 10.583 77.214 16.770 1.00306.70 C ATOM 767 C TRP 100 8.527 83.276 13.547 1.00306.70 C ATOM 768 O TRP 100 8.724 82.713 12.474 1.00306.70 O ATOM 769 N GLU 101 7.830 84.411 13.660 1.00188.84 N ATOM 770 CA GLU 101 7.154 85.050 12.579 1.00188.84 C ATOM 771 CB GLU 101 6.302 86.233 13.058 1.00188.84 C ATOM 772 CG GLU 101 5.320 85.806 14.144 1.00188.84 C ATOM 773 CD GLU 101 4.652 84.550 13.626 1.00188.84 C ATOM 774 OE1 GLU 101 4.020 84.650 12.544 1.00188.84 O ATOM 775 OE2 GLU 101 4.774 83.480 14.280 1.00188.84 O ATOM 776 C GLU 101 8.100 85.583 11.568 1.00188.84 C ATOM 777 O GLU 101 9.247 85.923 11.854 1.00188.84 O ATOM 778 N CYS 102 7.596 85.635 10.325 1.00119.37 N ATOM 779 CA CYS 102 8.304 86.179 9.216 1.00119.37 C ATOM 780 CB CYS 102 8.399 85.191 8.046 1.00119.37 C ATOM 781 SG CYS 102 9.418 85.798 6.677 1.00119.37 S ATOM 782 C CYS 102 7.472 87.334 8.773 1.00119.37 C ATOM 783 O CYS 102 6.280 87.388 9.065 1.00119.37 O ATOM 784 N THR 103 8.078 88.316 8.088 1.00222.58 N ATOM 785 CA THR 103 7.276 89.411 7.634 1.00222.58 C ATOM 786 CB THR 103 7.647 90.734 8.242 1.00222.58 C ATOM 787 OG1 THR 103 6.704 91.727 7.872 1.00222.58 O ATOM 788 CG2 THR 103 9.052 91.132 7.779 1.00222.58 C ATOM 789 C THR 103 7.429 89.481 6.153 1.00222.58 C ATOM 790 O THR 103 8.385 88.948 5.590 1.00222.58 O ATOM 791 N LYS 104 6.476 90.155 5.483 1.00193.99 N ATOM 792 CA LYS 104 6.481 90.195 4.054 1.00193.99 C ATOM 793 CB LYS 104 5.329 91.047 3.489 1.00193.99 C ATOM 794 CG LYS 104 5.095 90.857 1.989 1.00193.99 C ATOM 795 CD LYS 104 3.764 91.436 1.504 1.00193.99 C ATOM 796 CE LYS 104 3.527 91.255 0.003 1.00193.99 C ATOM 797 NZ LYS 104 2.221 91.838 -0.379 1.00193.99 N ATOM 798 C LYS 104 7.778 90.796 3.622 1.00193.99 C ATOM 799 O LYS 104 8.376 90.371 2.634 1.00193.99 O ATOM 800 N ASP 105 8.249 91.807 4.372 1.00158.72 N ATOM 801 CA ASP 105 9.476 92.474 4.042 1.00158.72 C ATOM 802 CB ASP 105 9.801 93.613 5.021 1.00158.72 C ATOM 803 CG ASP 105 8.716 94.668 4.883 1.00158.72 C ATOM 804 OD1 ASP 105 7.925 94.578 3.906 1.00158.72 O ATOM 805 OD2 ASP 105 8.663 95.575 5.755 1.00158.72 O ATOM 806 C ASP 105 10.606 91.497 4.138 1.00158.72 C ATOM 807 O ASP 105 11.490 91.469 3.283 1.00158.72 O ATOM 808 N ARG 106 10.588 90.657 5.188 1.00237.29 N ATOM 809 CA ARG 106 11.650 89.728 5.459 1.00237.29 C ATOM 810 CB ARG 106 11.497 89.047 6.827 1.00237.29 C ATOM 811 CG ARG 106 11.781 90.035 7.961 1.00237.29 C ATOM 812 CD ARG 106 11.293 89.592 9.338 1.00237.29 C ATOM 813 NE ARG 106 12.343 88.733 9.944 1.00237.29 N ATOM 814 CZ ARG 106 12.742 88.965 11.227 1.00237.29 C ATOM 815 NH1 ARG 106 12.250 90.034 11.918 1.00237.29 N ATOM 816 NH2 ARG 106 13.632 88.121 11.821 1.00237.29 N ATOM 817 C ARG 106 11.732 88.695 4.382 1.00237.29 C ATOM 818 O ARG 106 12.816 88.190 4.091 1.00237.29 O ATOM 819 N CYS 107 10.589 88.337 3.769 1.00216.69 N ATOM 820 CA CYS 107 10.608 87.344 2.737 1.00216.69 C ATOM 821 CB CYS 107 9.248 87.179 2.038 1.00216.69 C ATOM 822 SG CYS 107 7.912 86.843 3.214 1.00216.69 S ATOM 823 C CYS 107 11.547 87.834 1.687 1.00216.69 C ATOM 824 O CYS 107 11.501 88.993 1.282 1.00216.69 O ATOM 825 N GLY 108 12.442 86.947 1.219 1.00105.70 N ATOM 826 CA GLY 108 13.354 87.336 0.187 1.00105.70 C ATOM 827 C GLY 108 14.509 88.077 0.786 1.00105.70 C ATOM 828 O GLY 108 15.189 88.826 0.088 1.00105.70 O ATOM 829 N GLU 109 14.769 87.895 2.097 1.00112.75 N ATOM 830 CA GLU 109 15.874 88.601 2.683 1.00112.75 C ATOM 831 CB GLU 109 15.623 89.080 4.124 1.00112.75 C ATOM 832 CG GLU 109 16.737 89.990 4.649 1.00112.75 C ATOM 833 CD GLU 109 16.361 90.479 6.042 1.00112.75 C ATOM 834 OE1 GLU 109 15.291 90.056 6.554 1.00112.75 O ATOM 835 OE2 GLU 109 17.142 91.287 6.611 1.00112.75 O ATOM 836 C GLU 109 17.064 87.694 2.689 1.00112.75 C ATOM 837 O GLU 109 16.986 86.529 3.074 1.00112.75 O ATOM 838 N VAL 110 18.195 88.230 2.201 1.00 75.42 N ATOM 839 CA VAL 110 19.453 87.556 2.059 1.00 75.42 C ATOM 840 CB VAL 110 20.414 88.321 1.199 1.00 75.42 C ATOM 841 CG1 VAL 110 21.732 87.534 1.119 1.00 75.42 C ATOM 842 CG2 VAL 110 19.754 88.577 -0.165 1.00 75.42 C ATOM 843 C VAL 110 20.138 87.312 3.372 1.00 75.42 C ATOM 844 O VAL 110 20.864 86.327 3.504 1.00 75.42 O ATOM 845 N ARG 111 19.971 88.206 4.370 1.00135.41 N ATOM 846 CA ARG 111 20.781 88.055 5.550 1.00135.41 C ATOM 847 CB ARG 111 21.639 89.298 5.826 1.00135.41 C ATOM 848 CG ARG 111 20.794 90.553 6.059 1.00135.41 C ATOM 849 CD ARG 111 21.593 91.855 6.039 1.00135.41 C ATOM 850 NE ARG 111 22.551 91.813 7.177 1.00135.41 N ATOM 851 CZ ARG 111 23.390 92.865 7.393 1.00135.41 C ATOM 852 NH1 ARG 111 23.338 93.959 6.578 1.00135.41 N ATOM 853 NH2 ARG 111 24.281 92.824 8.424 1.00135.41 N ATOM 854 C ARG 111 19.947 87.831 6.776 1.00135.41 C ATOM 855 O ARG 111 18.827 88.325 6.890 1.00135.41 O ATOM 856 N ASN 112 20.492 87.036 7.724 1.00 85.34 N ATOM 857 CA ASN 112 19.842 86.799 8.982 1.00 85.34 C ATOM 858 CB ASN 112 19.256 85.382 9.094 1.00 85.34 C ATOM 859 CG ASN 112 18.080 85.275 8.136 1.00 85.34 C ATOM 860 OD1 ASN 112 17.012 85.838 8.374 1.00 85.34 O ATOM 861 ND2 ASN 112 18.280 84.536 7.013 1.00 85.34 N ATOM 862 C ASN 112 20.896 86.917 10.043 1.00 85.34 C ATOM 863 O ASN 112 21.743 86.036 10.178 1.00 85.34 O ATOM 864 N GLU 113 20.887 88.020 10.820 1.00120.56 N ATOM 865 CA GLU 113 21.904 88.153 11.825 1.00120.56 C ATOM 866 CB GLU 113 21.902 89.531 12.515 1.00120.56 C ATOM 867 CG GLU 113 22.427 90.681 11.644 1.00120.56 C ATOM 868 CD GLU 113 21.284 91.303 10.847 1.00120.56 C ATOM 869 OE1 GLU 113 20.358 90.556 10.434 1.00120.56 O ATOM 870 OE2 GLU 113 21.326 92.545 10.640 1.00120.56 O ATOM 871 C GLU 113 21.697 87.115 12.880 1.00120.56 C ATOM 872 O GLU 113 22.571 86.289 13.136 1.00120.56 O ATOM 873 N GLU 114 20.506 87.114 13.505 1.00206.79 N ATOM 874 CA GLU 114 20.223 86.119 14.492 1.00206.79 C ATOM 875 CB GLU 114 20.670 86.520 15.910 1.00206.79 C ATOM 876 CG GLU 114 20.565 85.387 16.932 1.00206.79 C ATOM 877 CD GLU 114 21.357 85.798 18.166 1.00206.79 C ATOM 878 OE1 GLU 114 22.602 85.950 18.043 1.00206.79 O ATOM 879 OE2 GLU 114 20.731 85.965 19.247 1.00206.79 O ATOM 880 C GLU 114 18.743 85.955 14.488 1.00206.79 C ATOM 881 O GLU 114 18.016 86.683 15.163 1.00206.79 O ATOM 882 N ASN 115 18.256 84.969 13.716 1.00 95.59 N ATOM 883 CA ASN 115 16.845 84.756 13.631 1.00 95.59 C ATOM 884 CB ASN 115 16.261 84.951 12.222 1.00 95.59 C ATOM 885 CG ASN 115 16.073 86.436 12.010 1.00 95.59 C ATOM 886 OD1 ASN 115 15.811 87.141 12.981 1.00 95.59 O ATOM 887 ND2 ASN 115 16.193 86.916 10.743 1.00 95.59 N ATOM 888 C ASN 115 16.581 83.341 13.981 1.00 95.59 C ATOM 889 O ASN 115 17.332 82.441 13.609 1.00 95.59 O ATOM 890 N ALA 116 15.501 83.120 14.744 1.00 43.31 N ATOM 891 CA ALA 116 15.105 81.793 15.081 1.00 43.31 C ATOM 892 CB ALA 116 13.885 81.752 16.018 1.00 43.31 C ATOM 893 C ALA 116 14.714 81.138 13.805 1.00 43.31 C ATOM 894 O ALA 116 14.961 79.953 13.589 1.00 43.31 O ATOM 895 N CYS 117 14.085 81.928 12.921 1.00117.72 N ATOM 896 CA CYS 117 13.555 81.409 11.703 1.00117.72 C ATOM 897 CB CYS 117 12.046 81.553 11.705 1.00117.72 C ATOM 898 SG CYS 117 11.471 81.199 10.057 1.00117.72 S ATOM 899 C CYS 117 14.075 82.206 10.540 1.00117.72 C ATOM 900 O CYS 117 14.302 83.407 10.661 1.00117.72 O ATOM 901 N HIS 118 14.256 81.557 9.365 1.00119.26 N ATOM 902 CA HIS 118 14.784 82.258 8.229 1.00119.26 C ATOM 903 ND1 HIS 118 18.110 82.156 8.833 1.00119.26 N ATOM 904 CG HIS 118 17.069 81.286 8.596 1.00119.26 C ATOM 905 CB HIS 118 15.972 81.518 7.595 1.00119.26 C ATOM 906 NE2 HIS 118 18.387 80.445 10.225 1.00119.26 N ATOM 907 CD2 HIS 118 17.254 80.247 9.455 1.00119.26 C ATOM 908 CE1 HIS 118 18.869 81.603 9.814 1.00119.26 C ATOM 909 C HIS 118 13.711 82.459 7.194 1.00119.26 C ATOM 910 O HIS 118 13.033 81.529 6.762 1.00119.26 O ATOM 911 N CYS 119 13.524 83.738 6.822 1.00136.72 N ATOM 912 CA CYS 119 12.577 84.274 5.883 1.00136.72 C ATOM 913 CB CYS 119 12.338 85.775 6.098 1.00136.72 C ATOM 914 SG CYS 119 11.248 86.038 7.520 1.00136.72 S ATOM 915 C CYS 119 12.932 84.053 4.442 1.00136.72 C ATOM 916 O CYS 119 12.074 84.217 3.577 1.00136.72 O ATOM 917 N SER 120 14.207 83.756 4.131 1.00111.99 N ATOM 918 CA SER 120 14.650 83.685 2.761 1.00111.99 C ATOM 919 CB SER 120 16.179 83.747 2.617 1.00111.99 C ATOM 920 OG SER 120 16.775 82.635 3.268 1.00111.99 O ATOM 921 C SER 120 14.187 82.444 2.067 1.00111.99 C ATOM 922 O SER 120 13.829 81.453 2.691 1.00111.99 O ATOM 923 N GLU 121 14.225 82.468 0.720 1.00178.95 N ATOM 924 CA GLU 121 13.790 81.369 -0.095 1.00178.95 C ATOM 925 CB GLU 121 13.746 81.685 -1.597 1.00178.95 C ATOM 926 CG GLU 121 15.043 82.219 -2.194 1.00178.95 C ATOM 927 CD GLU 121 14.730 82.504 -3.652 1.00178.95 C ATOM 928 OE1 GLU 121 14.543 81.521 -4.417 1.00178.95 O ATOM 929 OE2 GLU 121 14.655 83.707 -4.015 1.00178.95 O ATOM 930 C GLU 121 14.668 80.200 0.188 1.00178.95 C ATOM 931 O GLU 121 14.287 79.049 -0.020 1.00178.95 O ATOM 932 N ASP 122 15.884 80.482 0.673 1.00126.42 N ATOM 933 CA ASP 122 16.812 79.454 1.019 1.00126.42 C ATOM 934 CB ASP 122 18.085 80.045 1.643 1.00126.42 C ATOM 935 CG ASP 122 19.193 79.015 1.569 1.00126.42 C ATOM 936 OD1 ASP 122 18.926 77.877 1.101 1.00126.42 O ATOM 937 OD2 ASP 122 20.331 79.364 1.978 1.00126.42 O ATOM 938 C ASP 122 16.129 78.611 2.056 1.00126.42 C ATOM 939 O ASP 122 16.329 77.398 2.108 1.00126.42 O ATOM 940 N CYS 123 15.284 79.238 2.904 1.00150.11 N ATOM 941 CA CYS 123 14.610 78.510 3.945 1.00150.11 C ATOM 942 CB CYS 123 13.691 79.338 4.881 1.00150.11 C ATOM 943 SG CYS 123 12.087 79.859 4.183 1.00150.11 S ATOM 944 C CYS 123 13.743 77.482 3.310 1.00150.11 C ATOM 945 O CYS 123 13.560 76.404 3.869 1.00150.11 O ATOM 946 N LEU 124 13.152 77.785 2.140 1.00183.06 N ATOM 947 CA LEU 124 12.303 76.802 1.531 1.00183.06 C ATOM 948 CB LEU 124 11.746 77.199 0.148 1.00183.06 C ATOM 949 CG LEU 124 10.765 78.377 0.123 1.00183.06 C ATOM 950 CD1 LEU 124 11.462 79.677 0.534 1.00183.06 C ATOM 951 CD2 LEU 124 10.060 78.483 -1.240 1.00183.06 C ATOM 952 C LEU 124 13.125 75.583 1.244 1.00183.06 C ATOM 953 O LEU 124 12.717 74.460 1.537 1.00183.06 O ATOM 954 N SER 125 14.318 75.777 0.657 1.00101.36 N ATOM 955 CA SER 125 15.116 74.646 0.284 1.00101.36 C ATOM 956 CB SER 125 16.403 75.035 -0.465 1.00101.36 C ATOM 957 OG SER 125 16.083 75.613 -1.721 1.00101.36 O ATOM 958 C SER 125 15.523 73.882 1.504 1.00101.36 C ATOM 959 O SER 125 15.314 72.673 1.586 1.00101.36 O ATOM 960 N ARG 126 16.112 74.582 2.487 1.00194.02 N ATOM 961 CA ARG 126 16.642 73.953 3.663 1.00194.02 C ATOM 962 CB ARG 126 17.548 74.895 4.476 1.00194.02 C ATOM 963 CG ARG 126 18.461 74.157 5.456 1.00194.02 C ATOM 964 CD ARG 126 19.804 74.855 5.688 1.00194.02 C ATOM 965 NE ARG 126 19.544 76.279 6.036 1.00194.02 N ATOM 966 CZ ARG 126 20.469 77.230 5.713 1.00194.02 C ATOM 967 NH1 ARG 126 21.600 76.878 5.037 1.00194.02 N ATOM 968 NH2 ARG 126 20.263 78.534 6.059 1.00194.02 N ATOM 969 C ARG 126 15.554 73.382 4.532 1.00194.02 C ATOM 970 O ARG 126 15.733 72.315 5.117 1.00194.02 O ATOM 971 N GLY 127 14.388 74.054 4.628 1.00 43.68 N ATOM 972 CA GLY 127 13.308 73.581 5.459 1.00 43.68 C ATOM 973 C GLY 127 13.223 74.395 6.723 1.00 43.68 C ATOM 974 O GLY 127 12.447 74.082 7.623 1.00 43.68 O ATOM 975 N ASP 128 14.052 75.448 6.821 1.00187.55 N ATOM 976 CA ASP 128 14.137 76.372 7.923 1.00187.55 C ATOM 977 CB ASP 128 15.509 77.069 8.036 1.00187.55 C ATOM 978 CG ASP 128 15.922 77.652 6.695 1.00187.55 C ATOM 979 OD1 ASP 128 15.939 76.880 5.701 1.00187.55 O ATOM 980 OD2 ASP 128 16.245 78.867 6.643 1.00187.55 O ATOM 981 C ASP 128 13.001 77.364 7.981 1.00187.55 C ATOM 982 O ASP 128 12.897 78.123 8.943 1.00187.55 O ATOM 983 N CYS 129 12.136 77.420 6.949 1.00 88.46 N ATOM 984 CA CYS 129 11.098 78.415 6.855 1.00 88.46 C ATOM 985 CB CYS 129 10.112 78.153 5.710 1.00 88.46 C ATOM 986 SG CYS 129 10.917 78.200 4.089 1.00 88.46 S ATOM 987 C CYS 129 10.292 78.521 8.111 1.00 88.46 C ATOM 988 O CYS 129 10.153 77.583 8.893 1.00 88.46 O ATOM 989 N CYS 130 9.743 79.734 8.315 1.00128.58 N ATOM 990 CA CYS 130 8.982 80.081 9.482 1.00128.58 C ATOM 991 CB CYS 130 8.617 81.576 9.579 1.00128.58 C ATOM 992 SG CYS 130 10.085 82.616 9.711 1.00128.58 S ATOM 993 C CYS 130 7.690 79.384 9.326 1.00128.58 C ATOM 994 O CYS 130 7.307 79.023 8.217 1.00128.58 O ATOM 995 N THR 131 6.978 79.167 10.440 1.00194.96 N ATOM 996 CA THR 131 5.724 78.512 10.282 1.00194.96 C ATOM 997 CB THR 131 5.031 78.226 11.587 1.00194.96 C ATOM 998 OG1 THR 131 3.951 77.333 11.370 1.00194.96 O ATOM 999 CG2 THR 131 4.524 79.528 12.227 1.00194.96 C ATOM 1000 C THR 131 4.882 79.415 9.432 1.00194.96 C ATOM 1001 O THR 131 4.193 78.967 8.518 1.00194.96 O ATOM 1002 N ASN 132 4.968 80.729 9.713 1.00214.98 N ATOM 1003 CA ASN 132 4.270 81.805 9.067 1.00214.98 C ATOM 1004 CB ASN 132 4.145 83.078 9.912 1.00214.98 C ATOM 1005 CG ASN 132 2.929 82.847 10.796 1.00214.98 C ATOM 1006 OD1 ASN 132 2.733 81.764 11.344 1.00214.98 O ATOM 1007 ND2 ASN 132 2.063 83.888 10.915 1.00214.98 N ATOM 1008 C ASN 132 4.828 82.147 7.720 1.00214.98 C ATOM 1009 O ASN 132 4.300 83.027 7.046 1.00214.98 O ATOM 1010 N TYR 133 5.942 81.525 7.303 1.00197.67 N ATOM 1011 CA TYR 133 6.564 81.889 6.059 1.00197.67 C ATOM 1012 CB TYR 133 7.699 80.909 5.718 1.00197.67 C ATOM 1013 CG TYR 133 8.326 81.298 4.427 1.00197.67 C ATOM 1014 CD1 TYR 133 9.322 82.244 4.392 1.00197.67 C ATOM 1015 CD2 TYR 133 7.924 80.712 3.249 1.00197.67 C ATOM 1016 CE1 TYR 133 9.903 82.597 3.197 1.00197.67 C ATOM 1017 CE2 TYR 133 8.503 81.065 2.052 1.00197.67 C ATOM 1018 CZ TYR 133 9.497 82.013 2.024 1.00197.67 C ATOM 1019 OH TYR 133 10.100 82.383 0.802 1.00197.67 O ATOM 1020 C TYR 133 5.557 81.819 4.946 1.00197.67 C ATOM 1021 O TYR 133 5.435 82.755 4.154 1.00197.67 O ATOM 1022 N GLN 134 4.780 80.728 4.868 1.00164.82 N ATOM 1023 CA GLN 134 3.818 80.632 3.814 1.00164.82 C ATOM 1024 CB GLN 134 3.116 79.264 3.775 1.00164.82 C ATOM 1025 CG GLN 134 4.085 78.124 3.452 1.00164.82 C ATOM 1026 CD GLN 134 3.314 76.813 3.434 1.00164.82 C ATOM 1027 OE1 GLN 134 2.086 76.792 3.503 1.00164.82 O ATOM 1028 NE2 GLN 134 4.058 75.680 3.331 1.00164.82 N ATOM 1029 C GLN 134 2.788 81.707 3.984 1.00164.82 C ATOM 1030 O GLN 134 2.378 82.327 3.001 1.00164.82 O ATOM 1031 N VAL 135 2.344 81.974 5.233 1.00283.56 N ATOM 1032 CA VAL 135 1.305 82.958 5.380 1.00283.56 C ATOM 1033 CB VAL 135 0.707 83.147 6.765 1.00283.56 C ATOM 1034 CG1 VAL 135 0.028 81.854 7.224 1.00283.56 C ATOM 1035 CG2 VAL 135 1.746 83.673 7.756 1.00283.56 C ATOM 1036 C VAL 135 1.765 84.286 4.908 1.00283.56 C ATOM 1037 O VAL 135 1.104 84.932 4.096 1.00283.56 O ATOM 1038 N VAL 136 2.912 84.741 5.421 1.00270.94 N ATOM 1039 CA VAL 136 3.343 86.046 5.054 1.00270.94 C ATOM 1040 CB VAL 136 4.396 86.537 6.018 1.00270.94 C ATOM 1041 CG1 VAL 136 5.657 85.663 5.935 1.00270.94 C ATOM 1042 CG2 VAL 136 4.648 88.022 5.770 1.00270.94 C ATOM 1043 C VAL 136 3.824 86.094 3.634 1.00270.94 C ATOM 1044 O VAL 136 3.344 86.896 2.836 1.00270.94 O ATOM 1045 N CYS 137 4.791 85.225 3.291 1.00289.84 N ATOM 1046 CA CYS 137 5.420 85.243 2.003 1.00289.84 C ATOM 1047 CB CYS 137 6.697 84.388 1.974 1.00289.84 C ATOM 1048 SG CYS 137 7.846 84.824 3.307 1.00289.84 S ATOM 1049 C CYS 137 4.571 84.711 0.902 1.00289.84 C ATOM 1050 O CYS 137 4.442 85.350 -0.140 1.00289.84 O ATOM 1051 N LYS 138 3.957 83.531 1.131 1.00449.54 N ATOM 1052 CA LYS 138 3.327 82.772 0.084 1.00449.54 C ATOM 1053 CB LYS 138 3.082 81.314 0.497 1.00449.54 C ATOM 1054 CG LYS 138 4.313 80.420 0.408 1.00449.54 C ATOM 1055 CD LYS 138 4.702 80.099 -1.031 1.00449.54 C ATOM 1056 CE LYS 138 3.783 79.047 -1.654 1.00449.54 C ATOM 1057 NZ LYS 138 4.076 78.898 -3.093 1.00449.54 N ATOM 1058 C LYS 138 2.012 83.314 -0.194 1.00449.54 C ATOM 1059 O LYS 138 1.021 82.600 -0.348 1.00449.54 O ATOM 1060 N GLY 139 1.951 84.611 -0.373 1.00278.64 N ATOM 1061 CA GLY 139 0.596 84.896 -0.452 1.00278.64 C ATOM 1062 C GLY 139 0.134 85.342 -1.761 1.00278.64 C ATOM 1063 O GLY 139 0.869 85.316 -2.735 1.00278.64 O ATOM 1064 N GLU 140 -1.161 85.700 -1.706 1.00430.14 N ATOM 1065 CA GLU 140 -2.128 86.304 -2.541 1.00430.14 C ATOM 1066 CB GLU 140 -3.446 85.552 -2.703 1.00430.14 C ATOM 1067 CG GLU 140 -3.280 84.215 -3.404 1.00430.14 C ATOM 1068 CD GLU 140 -4.622 83.848 -3.983 1.00430.14 C ATOM 1069 OE1 GLU 140 -5.650 84.380 -3.486 1.00430.14 O ATOM 1070 OE2 GLU 140 -4.636 83.034 -4.944 1.00430.14 O ATOM 1071 C GLU 140 -2.560 87.638 -2.005 1.00430.14 C ATOM 1072 O GLU 140 -3.397 87.734 -1.113 1.00430.14 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 48.88 65.9 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 55.12 61.3 62 100.0 62 ARMSMC BURIED . . . . . . . . 29.01 76.9 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.14 48.7 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 82.81 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 90.93 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 75.64 53.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.47 56.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 67.27 61.1 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 76.17 50.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 70.42 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.63 38.5 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 63.67 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 70.67 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 18.74 66.7 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.25 0.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 83.25 0.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 90.70 0.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 65.88 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.98 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.98 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0440 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.24 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.09 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.16 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.44 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.25 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.65 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 4.79 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.72 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.51 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.53 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.62 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.29 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 177.992 0.981 0.981 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 191.983 0.978 0.979 32 100.0 32 ERRCA BURIED . . . . . . . . 143.553 0.987 0.988 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 178.089 0.979 0.980 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 192.523 0.976 0.977 156 100.0 156 ERRMC BURIED . . . . . . . . 143.448 0.986 0.986 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 193.996 0.961 0.962 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 198.953 0.962 0.963 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 213.511 0.960 0.961 112 100.0 112 ERRSC BURIED . . . . . . . . 152.757 0.963 0.964 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 185.624 0.971 0.972 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 202.008 0.969 0.970 240 100.0 240 ERRALL BURIED . . . . . . . . 148.175 0.975 0.976 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 24 38 40 43 45 45 45 DISTCA CA (P) 53.33 84.44 88.89 95.56 100.00 45 DISTCA CA (RMS) 0.75 1.06 1.18 1.62 1.98 DISTCA ALL (N) 111 215 259 304 334 345 345 DISTALL ALL (P) 32.17 62.32 75.07 88.12 96.81 345 DISTALL ALL (RMS) 0.73 1.15 1.46 2.00 2.85 DISTALL END of the results output