####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 373), selected 40 , name T0543TS102_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS102_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 59 - 70 4.79 47.36 LONGEST_CONTINUOUS_SEGMENT: 12 60 - 71 4.56 45.89 LONGEST_CONTINUOUS_SEGMENT: 12 61 - 72 4.63 44.84 LCS_AVERAGE: 26.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 63 - 70 1.85 44.70 LONGEST_CONTINUOUS_SEGMENT: 8 64 - 71 1.93 42.92 LCS_AVERAGE: 14.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 62 - 66 0.60 49.13 LONGEST_CONTINUOUS_SEGMENT: 5 65 - 69 0.72 43.43 LONGEST_CONTINUOUS_SEGMENT: 5 72 - 76 0.84 36.26 LCS_AVERAGE: 9.88 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 4 5 10 3 3 4 4 4 5 5 6 7 8 8 8 10 10 10 10 10 10 10 11 LCS_GDT S 57 S 57 4 5 10 3 3 4 4 4 5 5 6 7 8 8 9 10 10 10 10 10 10 11 11 LCS_GDT C 58 C 58 4 5 10 3 3 4 4 4 5 5 6 7 8 8 9 10 10 10 10 10 10 11 11 LCS_GDT K 59 K 59 4 5 12 3 3 4 4 4 5 7 7 8 8 9 9 10 11 12 12 12 13 13 13 LCS_GDT G 60 G 60 3 5 12 3 3 4 4 4 5 7 7 8 8 9 11 11 11 12 12 12 13 13 13 LCS_GDT R 61 R 61 3 5 12 3 3 4 4 4 5 7 7 8 8 10 11 11 11 12 12 12 13 13 13 LCS_GDT C 62 C 62 5 6 12 3 5 5 5 5 6 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT F 63 F 63 5 8 12 4 5 5 5 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT E 64 E 64 5 8 12 4 5 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT L 65 L 65 5 8 12 4 5 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT Q 66 Q 66 5 8 12 4 5 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT E 67 E 67 5 8 12 4 4 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT V 68 V 68 5 8 12 3 4 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT G 69 G 69 5 8 12 4 4 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT P 70 P 70 4 8 12 2 3 4 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT P 71 P 71 4 8 12 3 3 4 6 7 7 8 9 9 10 10 10 10 11 11 12 12 13 13 13 LCS_GDT D 72 D 72 5 6 12 3 4 5 5 5 7 7 7 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT C 73 C 73 5 6 11 3 4 5 5 5 7 7 7 8 8 8 8 8 9 9 10 10 10 11 11 LCS_GDT R 74 R 74 5 6 10 3 4 5 5 5 7 7 7 8 8 8 8 8 9 9 10 10 10 10 11 LCS_GDT C 75 C 75 5 6 10 3 4 5 5 5 7 7 7 8 8 8 8 8 9 9 10 10 10 10 11 LCS_GDT D 76 D 76 5 6 10 3 4 5 5 5 7 7 7 8 8 8 8 8 9 9 10 10 10 10 11 LCS_GDT N 77 N 77 3 6 10 3 3 4 5 5 7 7 7 8 8 8 8 8 9 9 10 10 10 11 11 LCS_GDT L 78 L 78 3 5 10 3 3 4 4 4 5 6 6 7 7 8 8 8 8 9 10 10 10 11 11 LCS_GDT C 79 C 79 3 4 9 3 3 3 4 4 4 6 6 7 7 7 8 8 8 9 10 10 10 11 11 LCS_GDT K 80 K 80 3 4 9 0 3 3 4 4 4 6 6 7 7 7 8 8 8 9 10 10 10 11 11 LCS_GDT S 81 S 81 3 4 9 0 3 3 4 4 6 7 7 8 8 8 8 8 8 9 10 10 10 11 12 LCS_GDT Y 82 Y 82 3 6 10 0 3 3 5 7 7 7 7 8 8 8 9 9 10 11 11 11 11 11 12 LCS_GDT S 83 S 83 4 6 10 3 4 4 5 7 7 7 7 8 8 8 9 9 10 11 11 11 11 11 12 LCS_GDT S 84 S 84 4 6 10 3 4 4 5 7 7 7 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT C 85 C 85 4 6 10 3 4 4 5 7 7 7 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT C 86 C 86 4 6 10 3 4 4 5 7 7 7 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT H 87 H 87 4 6 10 3 3 4 4 7 7 7 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT D 88 D 88 4 6 10 3 3 4 4 7 7 7 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT F 89 F 89 3 4 10 3 3 3 4 4 4 5 6 6 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT D 90 D 90 3 4 10 3 3 3 4 4 4 5 6 6 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT E 91 E 91 3 3 10 3 3 3 3 3 4 5 6 6 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT L 92 L 92 3 4 10 3 3 3 3 4 4 4 5 6 7 8 9 9 10 11 11 11 12 12 12 LCS_GDT C 93 C 93 3 4 9 3 3 3 3 4 4 4 5 6 7 8 8 9 9 9 10 11 12 12 12 LCS_GDT L 94 L 94 3 4 9 3 3 3 3 4 4 4 5 5 6 8 8 9 9 9 10 10 12 12 12 LCS_GDT K 95 K 95 3 4 9 0 3 3 3 4 4 4 5 5 6 7 8 9 9 9 10 11 12 12 12 LCS_AVERAGE LCS_A: 16.90 ( 9.88 14.38 26.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 6 7 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 GDT PERCENT_AT 10.00 12.50 12.50 15.00 17.50 20.00 20.00 22.50 22.50 25.00 25.00 27.50 27.50 27.50 30.00 30.00 30.00 32.50 32.50 32.50 GDT RMS_LOCAL 0.31 0.60 0.60 1.18 1.51 1.85 1.85 2.28 2.28 2.79 2.79 4.18 4.18 3.87 4.79 4.56 4.56 5.24 5.24 5.24 GDT RMS_ALL_AT 44.25 49.13 49.13 44.10 43.76 44.70 44.70 45.49 45.49 44.66 44.66 46.50 46.50 45.18 47.36 45.89 45.89 46.74 46.74 46.74 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: F 89 F 89 # possible swapping detected: D 90 D 90 # possible swapping detected: E 91 E 91 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 32.702 0 0.601 0.601 34.275 0.000 0.000 LGA S 57 S 57 25.696 0 0.090 0.683 28.221 0.000 0.000 LGA C 58 C 58 19.527 0 0.671 0.651 21.623 0.000 0.000 LGA K 59 K 59 14.825 0 0.096 0.800 16.734 0.000 0.000 LGA G 60 G 60 12.391 0 0.706 0.706 12.747 0.000 0.000 LGA R 61 R 61 9.968 0 0.669 0.655 16.911 2.619 0.952 LGA C 62 C 62 3.954 0 0.051 0.078 5.421 47.857 46.667 LGA F 63 F 63 2.209 0 0.534 0.412 3.426 61.190 60.130 LGA E 64 E 64 1.086 0 0.000 0.800 4.858 83.690 61.164 LGA L 65 L 65 1.164 0 0.610 0.602 2.860 77.619 75.357 LGA Q 66 Q 66 1.894 0 0.046 1.361 3.476 75.000 68.730 LGA E 67 E 67 1.193 0 0.086 0.929 5.724 83.690 62.963 LGA V 68 V 68 2.215 0 0.095 1.102 4.926 72.976 64.762 LGA G 69 G 69 2.406 0 0.317 0.317 2.940 60.952 60.952 LGA P 70 P 70 2.856 0 0.079 0.290 4.812 59.048 50.612 LGA P 71 P 71 6.420 0 0.613 0.525 7.871 17.143 17.211 LGA D 72 D 72 11.003 3 0.161 0.212 13.197 0.357 0.179 LGA C 73 C 73 17.166 0 0.144 0.868 20.221 0.000 0.000 LGA R 74 R 74 21.376 0 0.119 0.795 24.741 0.000 0.000 LGA C 75 C 75 28.608 0 0.552 0.780 31.221 0.000 0.000 LGA D 76 D 76 32.436 0 0.111 1.023 34.028 0.000 0.000 LGA N 77 N 77 37.588 0 0.678 0.733 39.990 0.000 0.000 LGA L 78 L 78 37.012 0 0.622 1.450 37.199 0.000 0.000 LGA C 79 C 79 38.160 0 0.642 0.832 38.755 0.000 0.000 LGA K 80 K 80 41.805 0 0.632 1.190 43.270 0.000 0.000 LGA S 81 S 81 44.359 0 0.619 0.941 46.729 0.000 0.000 LGA Y 82 Y 82 44.244 0 0.647 0.555 44.644 0.000 0.000 LGA S 83 S 83 46.400 0 0.390 0.726 46.690 0.000 0.000 LGA S 84 S 84 49.438 0 0.598 0.831 52.411 0.000 0.000 LGA C 85 C 85 54.179 0 0.123 0.855 55.741 0.000 0.000 LGA C 86 C 86 57.661 0 0.044 0.052 59.701 0.000 0.000 LGA H 87 H 87 59.156 0 0.637 1.069 62.298 0.000 0.000 LGA D 88 D 88 66.643 0 0.542 1.116 69.580 0.000 0.000 LGA F 89 F 89 70.200 0 0.560 1.348 73.832 0.000 0.000 LGA D 90 D 90 74.265 0 0.555 1.141 77.640 0.000 0.000 LGA E 91 E 91 78.181 0 0.545 1.198 81.723 0.000 0.000 LGA L 92 L 92 84.164 0 0.696 0.599 86.915 0.000 0.000 LGA C 93 C 93 87.051 0 0.602 0.902 90.488 0.000 0.000 LGA L 94 L 94 90.850 0 0.480 1.370 92.371 0.000 0.000 LGA K 95 K 95 95.896 0 0.057 0.850 99.253 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 30.594 30.486 30.541 16.054 14.242 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 9 2.28 20.000 18.978 0.378 LGA_LOCAL RMSD: 2.283 Number of atoms: 9 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 45.495 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 30.594 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.276511 * X + 0.929808 * Y + 0.242896 * Z + 255.668488 Y_new = -0.112710 * X + -0.282384 * Y + 0.952657 * Z + 8.336190 Z_new = 0.954378 * X + 0.236043 * Y + 0.182881 * Z + 122.512978 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.754537 -1.267571 0.911624 [DEG: -157.8234 -72.6265 52.2322 ] ZXZ: 2.891945 1.386880 1.328336 [DEG: 165.6962 79.4624 76.1080 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS102_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS102_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 9 2.28 18.978 30.59 REMARK ---------------------------------------------------------- MOLECULE T0543TS102_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REFINED REMARK PARENT 2gsn_A ATOM 520 N GLY 56 5.697 87.973 9.977 1.00 9.88 N ATOM 521 CA GLY 56 6.838 87.954 10.842 1.00 9.88 C ATOM 522 C GLY 56 7.800 86.961 10.288 1.00 9.88 C ATOM 523 O GLY 56 7.405 85.946 9.716 1.00 9.88 O ATOM 524 H GLY 56 5.475 87.238 9.509 1.00 9.88 H ATOM 525 N SER 57 9.106 87.237 10.458 1.00 9.94 N ATOM 526 CA SER 57 10.098 86.330 9.969 1.00 9.94 C ATOM 527 C SER 57 10.800 85.796 11.169 1.00 9.94 C ATOM 528 O SER 57 11.069 86.527 12.121 1.00 9.94 O ATOM 529 H SER 57 9.355 87.992 10.879 1.00 9.94 H ATOM 530 CB SER 57 11.044 87.042 9.001 1.00 9.94 C ATOM 531 HG SER 57 9.751 87.995 8.053 1.00 9.94 H ATOM 532 OG SER 57 10.357 87.469 7.837 1.00 9.94 O ATOM 533 N CYS 58 11.100 84.485 11.158 1.00 9.89 N ATOM 534 CA CYS 58 11.755 83.941 12.304 1.00 9.89 C ATOM 535 C CYS 58 13.037 83.335 11.847 1.00 9.89 C ATOM 536 O CYS 58 13.148 82.843 10.725 1.00 9.89 O ATOM 537 H CYS 58 10.902 83.953 10.459 1.00 9.89 H ATOM 538 CB CYS 58 10.856 82.918 13.001 1.00 9.89 C ATOM 539 SG CYS 58 9.288 83.589 13.600 1.00 9.89 S ATOM 540 N LYS 59 14.058 83.387 12.723 1.00 10.13 N ATOM 541 CA LYS 59 15.313 82.791 12.392 1.00 10.13 C ATOM 542 C LYS 59 15.148 81.326 12.607 1.00 10.13 C ATOM 543 O LYS 59 14.459 80.897 13.532 1.00 10.13 O ATOM 544 H LYS 59 13.950 83.798 13.517 1.00 10.13 H ATOM 545 CB LYS 59 16.432 83.389 13.246 1.00 10.13 C ATOM 546 CD LYS 59 17.854 85.377 13.820 1.00 10.13 C ATOM 547 CE LYS 59 18.122 86.848 13.549 1.00 10.13 C ATOM 548 CG LYS 59 16.711 84.856 12.963 1.00 10.13 C ATOM 549 HZ1 LYS 59 19.354 88.238 14.216 1.00 10.13 H ATOM 550 HZ2 LYS 59 19.971 86.923 14.236 1.00 10.13 H ATOM 551 HZ3 LYS 59 19.005 87.287 15.258 1.00 10.13 H ATOM 552 NZ LYS 59 19.223 87.378 14.400 1.00 10.13 N ATOM 553 N GLY 60 15.755 80.512 11.725 1.00 10.91 N ATOM 554 CA GLY 60 15.630 79.095 11.876 1.00 10.91 C ATOM 555 C GLY 60 16.635 78.661 12.887 1.00 10.91 C ATOM 556 O GLY 60 17.552 79.406 13.231 1.00 10.91 O ATOM 557 H GLY 60 16.236 80.852 11.044 1.00 10.91 H ATOM 558 N ARG 61 16.477 77.421 13.385 1.00 10.41 N ATOM 559 CA ARG 61 17.398 76.881 14.336 1.00 10.41 C ATOM 560 C ARG 61 17.938 75.629 13.737 1.00 10.41 C ATOM 561 O ARG 61 17.229 74.911 13.035 1.00 10.41 O ATOM 562 H ARG 61 15.775 76.930 13.109 1.00 10.41 H ATOM 563 CB ARG 61 16.703 76.637 15.677 1.00 10.41 C ATOM 564 CD ARG 61 15.477 77.581 17.653 1.00 10.41 C ATOM 565 HE ARG 61 17.250 77.117 18.469 1.00 10.41 H ATOM 566 NE ARG 61 16.410 77.073 18.657 1.00 10.41 N ATOM 567 CG ARG 61 16.170 77.898 16.339 1.00 10.41 C ATOM 568 CZ ARG 61 16.043 76.556 19.824 1.00 10.41 C ATOM 569 HH11 ARG 61 17.797 76.171 20.470 1.00 10.41 H ATOM 570 HH12 ARG 61 16.725 75.785 21.430 1.00 10.41 H ATOM 571 NH1 ARG 61 16.963 76.119 20.674 1.00 10.41 N ATOM 572 HH21 ARG 61 14.162 76.760 19.588 1.00 10.41 H ATOM 573 HH22 ARG 61 14.520 76.141 20.895 1.00 10.41 H ATOM 574 NH2 ARG 61 14.758 76.477 20.139 1.00 10.41 N ATOM 575 N CYS 62 19.228 75.344 13.990 1.00 10.95 N ATOM 576 CA CYS 62 19.802 74.153 13.445 1.00 10.95 C ATOM 577 C CYS 62 19.801 73.131 14.529 1.00 10.95 C ATOM 578 O CYS 62 20.311 73.371 15.622 1.00 10.95 O ATOM 579 H CYS 62 19.729 75.893 14.497 1.00 10.95 H ATOM 580 CB CYS 62 21.209 74.431 12.913 1.00 10.95 C ATOM 581 SG CYS 62 21.271 75.611 11.545 1.00 10.95 S ATOM 582 N PHE 63 19.199 71.961 14.253 1.00 12.23 N ATOM 583 CA PHE 63 19.190 70.921 15.233 1.00 12.23 C ATOM 584 C PHE 63 20.015 69.827 14.647 1.00 12.23 C ATOM 585 O PHE 63 19.762 69.384 13.528 1.00 12.23 O ATOM 586 H PHE 63 18.803 71.831 13.455 1.00 12.23 H ATOM 587 CB PHE 63 17.755 70.493 15.547 1.00 12.23 C ATOM 588 CG PHE 63 16.938 71.561 16.216 1.00 12.23 C ATOM 589 CZ PHE 63 15.425 73.535 17.459 1.00 12.23 C ATOM 590 CD1 PHE 63 16.270 72.513 15.466 1.00 12.23 C ATOM 591 CE1 PHE 63 15.517 73.495 16.081 1.00 12.23 C ATOM 592 CD2 PHE 63 16.835 71.613 17.594 1.00 12.23 C ATOM 593 CE2 PHE 63 16.082 72.596 18.210 1.00 12.23 C ATOM 594 N GLU 64 21.043 69.372 15.385 1.00 12.67 N ATOM 595 CA GLU 64 21.878 68.343 14.841 1.00 12.67 C ATOM 596 C GLU 64 21.761 67.146 15.714 1.00 12.67 C ATOM 597 O GLU 64 21.665 67.258 16.937 1.00 12.67 O ATOM 598 H GLU 64 21.212 69.702 16.205 1.00 12.67 H ATOM 599 CB GLU 64 23.325 68.828 14.734 1.00 12.67 C ATOM 600 CD GLU 64 24.968 70.437 13.687 1.00 12.67 C ATOM 601 CG GLU 64 23.521 69.990 13.774 1.00 12.67 C ATOM 602 OE1 GLU 64 25.800 69.903 14.451 1.00 12.67 O ATOM 603 OE2 GLU 64 25.268 71.318 12.856 1.00 12.67 O ATOM 604 N LEU 65 21.748 65.956 15.090 1.00 15.94 N ATOM 605 CA LEU 65 21.670 64.759 15.864 1.00 15.94 C ATOM 606 C LEU 65 23.041 64.169 15.816 1.00 15.94 C ATOM 607 O LEU 65 23.437 63.574 14.814 1.00 15.94 O ATOM 608 H LEU 65 21.786 65.910 14.191 1.00 15.94 H ATOM 609 CB LEU 65 20.595 63.826 15.303 1.00 15.94 C ATOM 610 CG LEU 65 19.173 64.388 15.246 1.00 15.94 C ATOM 611 CD1 LEU 65 18.231 63.401 14.574 1.00 15.94 C ATOM 612 CD2 LEU 65 18.673 64.728 16.642 1.00 15.94 C ATOM 613 N GLN 66 23.804 64.333 16.913 1.00 14.81 N ATOM 614 CA GLN 66 25.126 63.793 16.968 1.00 14.81 C ATOM 615 C GLN 66 25.295 63.205 18.326 1.00 14.81 C ATOM 616 O GLN 66 24.774 63.729 19.309 1.00 14.81 O ATOM 617 H GLN 66 23.475 64.789 17.615 1.00 14.81 H ATOM 618 CB GLN 66 26.163 64.879 16.671 1.00 14.81 C ATOM 619 CD GLN 66 26.499 64.543 14.190 1.00 14.81 C ATOM 620 CG GLN 66 26.043 65.488 15.284 1.00 14.81 C ATOM 621 OE1 GLN 66 27.351 63.683 14.416 1.00 14.81 O ATOM 622 HE21 GLN 66 26.167 64.163 12.316 1.00 14.81 H ATOM 623 HE22 GLN 66 25.312 65.340 12.877 1.00 14.81 H ATOM 624 NE2 GLN 66 25.932 64.699 13.000 1.00 14.81 N ATOM 625 N GLU 67 26.011 62.069 18.416 1.00 15.13 N ATOM 626 CA GLU 67 26.220 61.492 19.707 1.00 15.13 C ATOM 627 C GLU 67 27.686 61.294 19.886 1.00 15.13 C ATOM 628 O GLU 67 28.348 60.674 19.056 1.00 15.13 O ATOM 629 H GLU 67 26.356 61.674 17.685 1.00 15.13 H ATOM 630 CB GLU 67 25.448 60.178 19.837 1.00 15.13 C ATOM 631 CD GLU 67 24.744 58.252 21.314 1.00 15.13 C ATOM 632 CG GLU 67 25.572 59.518 21.202 1.00 15.13 C ATOM 633 OE1 GLU 67 24.003 57.940 20.358 1.00 15.13 O ATOM 634 OE2 GLU 67 24.837 57.573 22.358 1.00 15.13 O ATOM 635 N VAL 68 28.236 61.845 20.983 1.00 14.05 N ATOM 636 CA VAL 68 29.625 61.642 21.248 1.00 14.05 C ATOM 637 C VAL 68 29.814 61.767 22.719 1.00 14.05 C ATOM 638 O VAL 68 29.063 62.469 23.396 1.00 14.05 O ATOM 639 H VAL 68 27.738 62.338 21.547 1.00 14.05 H ATOM 640 CB VAL 68 30.500 62.640 20.468 1.00 14.05 C ATOM 641 CG1 VAL 68 30.221 64.064 20.924 1.00 14.05 C ATOM 642 CG2 VAL 68 31.974 62.302 20.638 1.00 14.05 C ATOM 643 N GLY 69 30.829 61.067 23.259 1.00 13.15 N ATOM 644 CA GLY 69 31.104 61.189 24.655 1.00 13.15 C ATOM 645 C GLY 69 32.442 60.580 24.896 1.00 13.15 C ATOM 646 O GLY 69 32.657 59.389 24.677 1.00 13.15 O ATOM 647 H GLY 69 31.333 60.525 22.747 1.00 13.15 H ATOM 648 N PRO 70 33.350 61.396 25.345 1.00 13.58 N ATOM 649 CA PRO 70 34.648 60.875 25.660 1.00 13.58 C ATOM 650 C PRO 70 34.572 60.158 26.964 1.00 13.58 C ATOM 651 O PRO 70 33.719 60.506 27.779 1.00 13.58 O ATOM 652 CB PRO 70 35.539 62.117 25.724 1.00 13.58 C ATOM 653 CD PRO 70 33.294 62.922 25.534 1.00 13.58 C ATOM 654 CG PRO 70 34.625 63.210 26.168 1.00 13.58 C ATOM 655 N PRO 71 35.401 59.177 27.172 1.00 13.35 N ATOM 656 CA PRO 71 35.381 58.517 28.446 1.00 13.35 C ATOM 657 C PRO 71 36.042 59.408 29.442 1.00 13.35 C ATOM 658 O PRO 71 36.913 60.185 29.052 1.00 13.35 O ATOM 659 CB PRO 71 36.159 57.222 28.203 1.00 13.35 C ATOM 660 CD PRO 71 36.428 58.538 26.222 1.00 13.35 C ATOM 661 CG PRO 71 37.133 57.568 27.127 1.00 13.35 C ATOM 662 N ASP 72 35.639 59.343 30.725 1.00 12.59 N ATOM 663 CA ASP 72 36.289 60.173 31.692 1.00 12.59 C ATOM 664 C ASP 72 36.641 59.320 32.862 1.00 12.59 C ATOM 665 O ASP 72 35.772 58.697 33.471 1.00 12.59 O ATOM 666 H ASP 72 34.974 58.792 30.979 1.00 12.59 H ATOM 667 CB ASP 72 35.385 61.341 32.091 1.00 12.59 C ATOM 668 CG ASP 72 36.065 62.306 33.042 1.00 12.59 C ATOM 669 OD1 ASP 72 37.105 61.932 33.624 1.00 12.59 O ATOM 670 OD2 ASP 72 35.558 63.435 33.207 1.00 12.59 O ATOM 671 N CYS 73 37.941 59.255 33.194 1.00 12.71 N ATOM 672 CA CYS 73 38.335 58.493 34.337 1.00 12.71 C ATOM 673 C CYS 73 39.227 59.369 35.152 1.00 12.71 C ATOM 674 O CYS 73 39.984 60.174 34.611 1.00 12.71 O ATOM 675 H CYS 73 38.562 59.685 32.705 1.00 12.71 H ATOM 676 CB CYS 73 39.027 57.197 33.906 1.00 12.71 C ATOM 677 SG CYS 73 37.988 56.087 32.928 1.00 12.71 S ATOM 678 N ARG 74 39.136 59.252 36.490 1.00 12.22 N ATOM 679 CA ARG 74 39.989 60.032 37.333 1.00 12.22 C ATOM 680 C ARG 74 40.793 59.068 38.133 1.00 12.22 C ATOM 681 O ARG 74 40.241 58.189 38.793 1.00 12.22 O ATOM 682 H ARG 74 38.539 58.684 36.854 1.00 12.22 H ATOM 683 CB ARG 74 39.160 60.973 38.211 1.00 12.22 C ATOM 684 CD ARG 74 37.602 62.933 38.366 1.00 12.22 C ATOM 685 HE ARG 74 36.910 63.941 36.777 1.00 12.22 H ATOM 686 NE ARG 74 36.836 63.939 37.634 1.00 12.22 N ATOM 687 CG ARG 74 38.389 62.027 37.434 1.00 12.22 C ATOM 688 CZ ARG 74 36.041 64.838 38.208 1.00 12.22 C ATOM 689 HH11 ARG 74 35.470 65.701 36.606 1.00 12.22 H ATOM 690 HH12 ARG 74 34.870 66.295 37.832 1.00 12.22 H ATOM 691 NH1 ARG 74 35.383 65.713 37.462 1.00 12.22 N ATOM 692 HH21 ARG 74 36.334 64.289 40.011 1.00 12.22 H ATOM 693 HH22 ARG 74 35.394 65.439 39.898 1.00 12.22 H ATOM 694 NH2 ARG 74 35.907 64.858 39.527 1.00 12.22 N ATOM 695 N CYS 75 42.132 59.195 38.079 1.00 12.92 N ATOM 696 CA CYS 75 42.936 58.294 38.846 1.00 12.92 C ATOM 697 C CYS 75 43.911 59.116 39.617 1.00 12.92 C ATOM 698 O CYS 75 44.513 60.050 39.088 1.00 12.92 O ATOM 699 H CYS 75 42.522 59.829 37.575 1.00 12.92 H ATOM 700 CB CYS 75 43.632 57.285 37.931 1.00 12.92 C ATOM 701 SG CYS 75 44.657 56.074 38.797 1.00 12.92 S ATOM 702 N ASP 76 44.069 58.795 40.914 1.00 12.17 N ATOM 703 CA ASP 76 45.003 59.514 41.725 1.00 12.17 C ATOM 704 C ASP 76 45.956 58.519 42.290 1.00 12.17 C ATOM 705 O ASP 76 45.577 57.395 42.617 1.00 12.17 O ATOM 706 H ASP 76 43.586 58.124 41.271 1.00 12.17 H ATOM 707 CB ASP 76 44.271 60.296 42.818 1.00 12.17 C ATOM 708 CG ASP 76 43.409 61.411 42.259 1.00 12.17 C ATOM 709 OD1 ASP 76 43.665 61.842 41.115 1.00 12.17 O ATOM 710 OD2 ASP 76 42.479 61.854 42.965 1.00 12.17 O ATOM 711 N ASN 77 47.241 58.910 42.391 1.00 11.95 N ATOM 712 CA ASN 77 48.212 58.031 42.965 1.00 11.95 C ATOM 713 C ASN 77 48.537 58.587 44.311 1.00 11.95 C ATOM 714 O ASN 77 48.779 59.785 44.455 1.00 11.95 O ATOM 715 H ASN 77 47.488 59.724 42.098 1.00 11.95 H ATOM 716 CB ASN 77 49.434 57.913 42.051 1.00 11.95 C ATOM 717 CG ASN 77 49.113 57.233 40.735 1.00 11.95 C ATOM 718 OD1 ASN 77 48.432 56.208 40.703 1.00 11.95 O ATOM 719 HD21 ASN 77 49.442 57.442 38.833 1.00 11.95 H ATOM 720 HD22 ASN 77 50.097 58.554 39.706 1.00 11.95 H ATOM 721 ND2 ASN 77 49.603 57.805 39.640 1.00 11.95 N ATOM 722 N LEU 78 48.524 57.726 45.346 1.00 12.43 N ATOM 723 CA LEU 78 48.835 58.193 46.663 1.00 12.43 C ATOM 724 C LEU 78 50.167 57.618 47.015 1.00 12.43 C ATOM 725 O LEU 78 50.421 56.438 46.778 1.00 12.43 O ATOM 726 H LEU 78 48.322 56.860 45.211 1.00 12.43 H ATOM 727 CB LEU 78 47.740 57.781 47.649 1.00 12.43 C ATOM 728 CG LEU 78 46.331 58.297 47.353 1.00 12.43 C ATOM 729 CD1 LEU 78 45.332 57.740 48.356 1.00 12.43 C ATOM 730 CD2 LEU 78 46.301 59.817 47.366 1.00 12.43 C ATOM 731 N CYS 79 51.063 58.448 47.578 1.00 11.70 N ATOM 732 CA CYS 79 52.354 57.932 47.918 1.00 11.70 C ATOM 733 C CYS 79 52.570 58.125 49.380 1.00 11.70 C ATOM 734 O CYS 79 52.192 59.145 49.955 1.00 11.70 O ATOM 735 H CYS 79 50.866 59.311 47.741 1.00 11.70 H ATOM 736 CB CYS 79 53.442 58.627 47.096 1.00 11.70 C ATOM 737 SG CYS 79 53.285 58.401 45.308 1.00 11.70 S ATOM 738 N LYS 80 53.171 57.108 50.024 1.00 12.02 N ATOM 739 CA LYS 80 53.501 57.198 51.413 1.00 12.02 C ATOM 740 C LYS 80 54.924 56.781 51.532 1.00 12.02 C ATOM 741 O LYS 80 55.415 55.966 50.752 1.00 12.02 O ATOM 742 H LYS 80 53.365 56.360 49.563 1.00 12.02 H ATOM 743 CB LYS 80 52.561 56.325 52.246 1.00 12.02 C ATOM 744 CD LYS 80 50.241 55.896 53.103 1.00 12.02 C ATOM 745 CE LYS 80 48.781 56.315 53.038 1.00 12.02 C ATOM 746 CG LYS 80 51.106 56.763 52.203 1.00 12.02 C ATOM 747 HZ1 LYS 80 47.080 55.759 53.866 1.00 12.02 H ATOM 748 HZ2 LYS 80 48.202 55.572 54.771 1.00 12.02 H ATOM 749 HZ3 LYS 80 47.980 54.633 53.685 1.00 12.02 H ATOM 750 NZ LYS 80 47.925 55.486 53.929 1.00 12.02 N ATOM 751 N SER 81 55.638 57.347 52.519 1.00 11.63 N ATOM 752 CA SER 81 57.010 56.987 52.686 1.00 11.63 C ATOM 753 C SER 81 57.184 56.617 54.116 1.00 11.63 C ATOM 754 O SER 81 56.331 56.908 54.952 1.00 11.63 O ATOM 755 H SER 81 55.261 57.947 53.073 1.00 11.63 H ATOM 756 CB SER 81 57.921 58.142 52.267 1.00 11.63 C ATOM 757 HG SER 81 57.921 59.056 53.893 1.00 11.63 H ATOM 758 OG SER 81 57.741 59.267 53.110 1.00 11.63 O ATOM 759 N TYR 82 58.296 55.930 54.426 1.00 11.71 N ATOM 760 CA TYR 82 58.523 55.545 55.783 1.00 11.71 C ATOM 761 C TYR 82 59.742 56.261 56.250 1.00 11.71 C ATOM 762 O TYR 82 60.778 56.250 55.588 1.00 11.71 O ATOM 763 H TYR 82 58.894 55.713 53.790 1.00 11.71 H ATOM 764 CB TYR 82 58.671 54.026 55.890 1.00 11.71 C ATOM 765 CG TYR 82 57.419 53.261 55.525 1.00 11.71 C ATOM 766 HH TYR 82 53.960 51.045 53.685 1.00 11.71 H ATOM 767 OH TYR 82 53.980 51.157 54.507 1.00 11.71 O ATOM 768 CZ TYR 82 55.117 51.853 54.845 1.00 11.71 C ATOM 769 CD1 TYR 82 57.142 52.940 54.203 1.00 11.71 C ATOM 770 CE1 TYR 82 55.999 52.241 53.861 1.00 11.71 C ATOM 771 CD2 TYR 82 56.519 52.861 56.505 1.00 11.71 C ATOM 772 CE2 TYR 82 55.371 52.162 56.181 1.00 11.71 C ATOM 773 N SER 83 59.630 56.939 57.410 1.00 11.14 N ATOM 774 CA SER 83 60.765 57.623 57.946 1.00 11.14 C ATOM 775 C SER 83 60.750 57.393 59.417 1.00 11.14 C ATOM 776 O SER 83 59.698 57.175 60.013 1.00 11.14 O ATOM 777 H SER 83 58.843 56.963 57.847 1.00 11.14 H ATOM 778 CB SER 83 60.714 59.109 57.588 1.00 11.14 C ATOM 779 HG SER 83 59.652 59.668 59.016 1.00 11.14 H ATOM 780 OG SER 83 59.598 59.741 58.191 1.00 11.14 O ATOM 781 N SER 84 61.940 57.415 60.041 1.00 11.24 N ATOM 782 CA SER 84 62.002 57.236 61.458 1.00 11.24 C ATOM 783 C SER 84 62.840 58.346 62.000 1.00 11.24 C ATOM 784 O SER 84 63.906 58.648 61.464 1.00 11.24 O ATOM 785 H SER 84 62.697 57.541 59.570 1.00 11.24 H ATOM 786 CB SER 84 62.571 55.858 61.801 1.00 11.24 C ATOM 787 HG SER 84 61.951 55.767 63.557 1.00 11.24 H ATOM 788 OG SER 84 62.697 55.692 63.202 1.00 11.24 O ATOM 789 N CYS 85 62.359 59.000 63.075 1.00 10.56 N ATOM 790 CA CYS 85 63.135 60.049 63.664 1.00 10.56 C ATOM 791 C CYS 85 62.928 59.974 65.141 1.00 10.56 C ATOM 792 O CYS 85 61.794 59.964 65.617 1.00 10.56 O ATOM 793 H CYS 85 61.559 58.783 63.423 1.00 10.56 H ATOM 794 CB CYS 85 62.723 61.407 63.091 1.00 10.56 C ATOM 795 SG CYS 85 63.664 62.808 63.739 1.00 10.56 S ATOM 796 N CYS 86 64.031 59.907 65.909 1.00 10.45 N ATOM 797 CA CYS 86 63.879 59.875 67.330 1.00 10.45 C ATOM 798 C CYS 86 64.813 60.897 67.880 1.00 10.45 C ATOM 799 O CYS 86 65.904 61.105 67.351 1.00 10.45 O ATOM 800 H CYS 86 64.852 59.882 65.544 1.00 10.45 H ATOM 801 CB CYS 86 64.164 58.472 67.868 1.00 10.45 C ATOM 802 SG CYS 86 63.052 57.191 67.241 1.00 10.45 S ATOM 803 N HIS 87 64.394 61.588 68.954 1.00 10.92 N ATOM 804 CA HIS 87 65.270 62.563 69.523 1.00 10.92 C ATOM 805 C HIS 87 65.593 62.086 70.899 1.00 10.92 C ATOM 806 O HIS 87 64.724 62.041 71.771 1.00 10.92 O ATOM 807 H HIS 87 63.582 61.447 69.315 1.00 10.92 H ATOM 808 CB HIS 87 64.609 63.944 69.520 1.00 10.92 C ATOM 809 CG HIS 87 64.279 64.451 68.151 1.00 10.92 C ATOM 810 ND1 HIS 87 65.204 65.082 67.348 1.00 10.92 N ATOM 811 CE1 HIS 87 64.617 65.422 66.187 1.00 10.92 C ATOM 812 CD2 HIS 87 63.091 64.472 67.309 1.00 10.92 C ATOM 813 HE2 HIS 87 62.752 65.191 65.456 1.00 10.92 H ATOM 814 NE2 HIS 87 63.349 65.059 66.157 1.00 10.92 N ATOM 815 N ASP 88 66.859 61.691 71.123 1.00 10.33 N ATOM 816 CA ASP 88 67.232 61.203 72.417 1.00 10.33 C ATOM 817 C ASP 88 68.328 62.067 72.940 1.00 10.33 C ATOM 818 O ASP 88 69.306 62.339 72.246 1.00 10.33 O ATOM 819 H ASP 88 67.471 61.733 70.464 1.00 10.33 H ATOM 820 CB ASP 88 67.660 59.737 72.333 1.00 10.33 C ATOM 821 CG ASP 88 66.511 58.813 71.979 1.00 10.33 C ATOM 822 OD1 ASP 88 65.345 59.214 72.178 1.00 10.33 O ATOM 823 OD2 ASP 88 66.777 57.689 71.504 1.00 10.33 O ATOM 824 N PHE 89 68.173 62.549 74.187 1.00 10.70 N ATOM 825 CA PHE 89 69.217 63.326 74.782 1.00 10.70 C ATOM 826 C PHE 89 69.681 62.585 75.991 1.00 10.70 C ATOM 827 O PHE 89 68.923 62.397 76.942 1.00 10.70 O ATOM 828 H PHE 89 67.416 62.384 74.646 1.00 10.70 H ATOM 829 CB PHE 89 68.712 64.730 75.123 1.00 10.70 C ATOM 830 CG PHE 89 68.305 65.535 73.922 1.00 10.70 C ATOM 831 CZ PHE 89 67.555 67.028 71.701 1.00 10.70 C ATOM 832 CD1 PHE 89 67.030 65.419 73.393 1.00 10.70 C ATOM 833 CE1 PHE 89 66.655 66.160 72.289 1.00 10.70 C ATOM 834 CD2 PHE 89 69.193 66.408 73.322 1.00 10.70 C ATOM 835 CE2 PHE 89 68.818 67.149 72.217 1.00 10.70 C ATOM 836 N ASP 90 70.947 62.125 75.976 1.00 10.12 N ATOM 837 CA ASP 90 71.478 61.446 77.118 1.00 10.12 C ATOM 838 C ASP 90 72.925 61.803 77.201 1.00 10.12 C ATOM 839 O ASP 90 73.776 61.090 76.670 1.00 10.12 O ATOM 840 H ASP 90 71.460 62.246 75.246 1.00 10.12 H ATOM 841 CB ASP 90 71.258 59.936 76.994 1.00 10.12 C ATOM 842 CG ASP 90 71.689 59.181 78.235 1.00 10.12 C ATOM 843 OD1 ASP 90 72.230 59.819 79.161 1.00 10.12 O ATOM 844 OD2 ASP 90 71.485 57.950 78.282 1.00 10.12 O ATOM 845 N GLU 91 73.248 62.930 77.861 1.00 10.62 N ATOM 846 CA GLU 91 74.631 63.285 77.972 1.00 10.62 C ATOM 847 C GLU 91 74.952 63.382 79.424 1.00 10.62 C ATOM 848 O GLU 91 74.285 64.091 80.175 1.00 10.62 O ATOM 849 H GLU 91 72.618 63.457 78.229 1.00 10.62 H ATOM 850 CB GLU 91 74.909 64.595 77.233 1.00 10.62 C ATOM 851 CD GLU 91 76.614 66.292 76.462 1.00 10.62 C ATOM 852 CG GLU 91 76.368 65.022 77.252 1.00 10.62 C ATOM 853 OE1 GLU 91 75.659 66.796 75.835 1.00 10.62 O ATOM 854 OE2 GLU 91 77.762 66.783 76.471 1.00 10.62 O ATOM 855 N LEU 92 75.988 62.641 79.860 1.00 10.02 N ATOM 856 CA LEU 92 76.397 62.703 81.231 1.00 10.02 C ATOM 857 C LEU 92 77.741 63.347 81.224 1.00 10.02 C ATOM 858 O LEU 92 78.628 62.933 80.481 1.00 10.02 O ATOM 859 H LEU 92 76.424 62.105 79.284 1.00 10.02 H ATOM 860 CB LEU 92 76.410 61.305 81.850 1.00 10.02 C ATOM 861 CG LEU 92 75.078 60.551 81.852 1.00 10.02 C ATOM 862 CD1 LEU 92 75.254 59.148 82.411 1.00 10.02 C ATOM 863 CD2 LEU 92 74.032 61.312 82.653 1.00 10.02 C ATOM 864 N CYS 93 77.925 64.396 82.043 1.00 11.32 N ATOM 865 CA CYS 93 79.202 65.041 82.032 1.00 11.32 C ATOM 866 C CYS 93 79.875 64.748 83.331 1.00 11.32 C ATOM 867 O CYS 93 79.573 65.368 84.350 1.00 11.32 O ATOM 868 H CYS 93 77.275 64.696 82.588 1.00 11.32 H ATOM 869 CB CYS 93 79.040 66.545 81.803 1.00 11.32 C ATOM 870 SG CYS 93 80.598 67.455 81.693 1.00 11.32 S ATOM 871 N LEU 94 80.801 63.774 83.334 1.00 10.02 N ATOM 872 CA LEU 94 81.523 63.517 84.537 1.00 10.02 C ATOM 873 C LEU 94 82.904 63.108 84.150 1.00 10.02 C ATOM 874 O LEU 94 83.088 62.313 83.230 1.00 10.02 O ATOM 875 H LEU 94 80.968 63.287 82.596 1.00 10.02 H ATOM 876 CB LEU 94 80.817 62.443 85.366 1.00 10.02 C ATOM 877 CG LEU 94 81.497 62.045 86.678 1.00 10.02 C ATOM 878 CD1 LEU 94 81.499 63.209 87.658 1.00 10.02 C ATOM 879 CD2 LEU 94 80.809 60.836 87.295 1.00 10.02 C ATOM 880 N LYS 95 83.921 63.671 84.828 1.00 9.98 N ATOM 881 CA LYS 95 85.261 63.265 84.532 1.00 9.98 C ATOM 882 C LYS 95 85.961 63.075 85.834 1.00 9.98 C ATOM 883 O LYS 95 85.726 63.808 86.794 1.00 9.98 O ATOM 884 H LYS 95 83.768 64.294 85.459 1.00 9.98 H ATOM 885 CB LYS 95 85.954 64.306 83.651 1.00 9.98 C ATOM 886 CD LYS 95 86.106 65.466 81.430 1.00 9.98 C ATOM 887 CE LYS 95 85.465 65.650 80.064 1.00 9.98 C ATOM 888 CG LYS 95 85.323 64.477 82.279 1.00 9.98 C ATOM 889 HZ1 LYS 95 85.834 66.679 78.421 1.00 9.98 H ATOM 890 HZ2 LYS 95 87.061 66.282 79.091 1.00 9.98 H ATOM 891 HZ3 LYS 95 86.277 67.390 79.609 1.00 9.98 H ATOM 892 NZ LYS 95 86.236 66.595 79.211 1.00 9.98 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 91.80 29.5 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 95.20 26.8 56 100.0 56 ARMSMC BURIED . . . . . . . . 82.54 36.4 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.62 38.9 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 91.48 40.0 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 85.60 44.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 106.86 27.3 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.09 56.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 59.48 58.8 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 75.79 50.0 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 35.76 80.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.40 55.6 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 58.96 62.5 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 49.30 57.1 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 94.95 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 21.17 80.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 21.17 80.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 23.63 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 2.50 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 30.59 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 30.59 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.7649 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 31.11 29 100.0 29 CRMSCA BURIED . . . . . . . . 29.19 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 30.43 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 30.89 142 100.0 142 CRMSMC BURIED . . . . . . . . 29.22 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 30.73 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 30.68 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 31.64 103 100.0 103 CRMSSC BURIED . . . . . . . . 28.27 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 30.60 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 31.30 219 100.0 219 CRMSALL BURIED . . . . . . . . 28.69 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.090 0.379 0.223 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 17.094 0.364 0.198 29 100.0 29 ERRCA BURIED . . . . . . . . 17.077 0.417 0.289 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.005 0.379 0.223 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 17.006 0.366 0.201 142 100.0 142 ERRMC BURIED . . . . . . . . 17.001 0.413 0.279 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.364 0.391 0.225 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 17.438 0.394 0.227 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 17.879 0.386 0.210 103 100.0 103 ERRSC BURIED . . . . . . . . 16.038 0.404 0.261 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.220 0.386 0.224 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 17.496 0.377 0.206 219 100.0 219 ERRALL BURIED . . . . . . . . 16.500 0.408 0.271 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 7 40 40 DISTCA CA (P) 0.00 0.00 0.00 0.00 17.50 40 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 7.09 DISTCA ALL (N) 0 0 2 6 50 303 303 DISTALL ALL (P) 0.00 0.00 0.66 1.98 16.50 303 DISTALL ALL (RMS) 0.00 0.00 2.48 3.81 7.03 DISTALL END of the results output