####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 319), selected 40 , name T0543TS096_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS096_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.18 2.18 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 67 - 94 1.92 2.26 LCS_AVERAGE: 58.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 78 - 94 0.72 2.28 LCS_AVERAGE: 31.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 9 12 40 6 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 9 12 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 9 12 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 9 12 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 9 12 40 3 20 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 9 12 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 9 12 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 9 12 40 10 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 9 12 40 3 14 24 29 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 5 12 40 3 5 16 25 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 5 12 40 3 5 7 10 11 25 29 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 4 28 40 3 4 10 29 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 4 28 40 3 4 4 5 6 8 16 29 38 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 4 28 40 3 4 4 8 20 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 6 28 40 3 6 15 25 33 35 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 7 28 40 3 6 16 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 16 28 40 4 13 24 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 16 28 40 4 15 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 16 28 40 4 18 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 16 28 40 6 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 16 28 40 4 12 19 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 16 28 40 4 7 14 25 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 17 28 40 5 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 17 28 40 5 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 17 28 40 9 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 17 28 40 4 20 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 17 28 40 7 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 17 28 40 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 4 27 40 0 3 5 8 16 28 34 37 39 39 40 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 63.50 ( 31.56 58.94 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 24 28 30 33 36 37 37 39 39 40 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 27.50 60.00 70.00 75.00 82.50 90.00 92.50 92.50 97.50 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.71 0.85 0.99 1.21 1.55 1.61 1.61 1.99 1.99 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 GDT RMS_ALL_AT 2.37 2.32 2.34 2.39 2.37 2.22 2.24 2.24 2.19 2.19 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # possible swapping detected: Y 82 Y 82 # possible swapping detected: D 90 D 90 # possible swapping detected: E 91 E 91 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 0.826 0 0.421 0.421 3.365 71.667 71.667 LGA S 57 S 57 0.874 0 0.139 0.645 3.171 85.952 79.206 LGA C 58 C 58 0.877 0 0.348 0.635 2.455 81.786 80.397 LGA K 59 K 59 1.203 0 0.492 1.195 8.256 79.524 53.386 LGA G 60 G 60 1.339 0 0.104 0.104 1.339 83.690 83.690 LGA R 61 R 61 0.902 0 0.037 1.060 3.652 90.476 81.558 LGA C 62 C 62 0.673 0 0.619 0.785 3.485 78.095 77.063 LGA F 63 F 63 1.377 0 0.430 0.314 2.454 75.119 72.208 LGA E 64 E 64 1.984 0 0.139 0.784 2.669 69.048 68.519 LGA L 65 L 65 3.481 0 0.589 0.928 5.073 53.810 46.607 LGA Q 66 Q 66 6.112 0 0.368 0.847 12.829 24.048 11.005 LGA E 67 E 67 2.616 0 0.235 1.038 5.257 51.905 42.222 LGA V 68 V 68 6.350 0 0.239 0.395 10.615 23.929 13.878 LGA G 69 G 69 3.539 0 0.094 0.094 4.543 53.333 53.333 LGA P 70 P 70 2.861 0 0.041 0.266 6.480 54.048 40.884 LGA P 71 P 71 2.356 0 0.033 0.445 2.486 64.762 67.075 LGA D 72 D 72 2.083 3 0.680 0.671 4.443 57.857 37.024 LGA C 73 C 73 1.723 0 0.609 0.646 3.684 71.071 64.127 LGA R 74 R 74 1.358 0 0.502 1.487 9.187 73.214 49.827 LGA C 75 C 75 0.751 0 0.470 0.429 1.714 90.476 84.603 LGA D 76 D 76 2.336 0 0.063 1.162 6.153 66.786 55.298 LGA N 77 N 77 3.198 0 0.113 1.000 6.707 59.167 44.464 LGA L 78 L 78 0.488 0 0.246 1.320 4.447 95.357 75.893 LGA C 79 C 79 0.225 0 0.073 0.146 0.448 100.000 100.000 LGA K 80 K 80 0.285 0 0.034 0.328 2.054 100.000 92.011 LGA S 81 S 81 0.748 0 0.049 0.070 0.937 90.476 90.476 LGA Y 82 Y 82 1.388 0 0.032 0.189 1.857 79.286 75.000 LGA S 83 S 83 1.162 0 0.141 0.165 1.391 83.690 82.937 LGA S 84 S 84 0.921 0 0.219 0.585 1.938 85.952 83.016 LGA C 85 C 85 0.385 0 0.022 0.780 2.934 95.238 88.095 LGA C 86 C 86 0.934 0 0.113 0.658 2.263 90.476 84.683 LGA H 87 H 87 1.394 0 0.094 1.372 7.265 81.548 52.524 LGA D 88 D 88 0.438 0 0.139 0.110 1.008 95.238 91.726 LGA F 89 F 89 0.745 0 0.070 0.239 0.955 90.476 93.074 LGA D 90 D 90 0.843 0 0.043 0.653 1.855 85.952 83.810 LGA E 91 E 91 0.999 0 0.118 1.250 6.240 88.214 67.725 LGA L 92 L 92 1.010 0 0.198 0.939 5.275 85.952 68.929 LGA C 93 C 93 0.841 0 0.030 0.061 1.308 90.476 88.968 LGA L 94 L 94 0.331 0 0.387 1.376 5.445 84.643 69.167 LGA K 95 K 95 5.246 0 0.400 1.197 12.689 34.524 20.212 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.178 2.142 3.375 75.432 67.157 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 37 1.61 81.875 79.767 2.168 LGA_LOCAL RMSD: 1.606 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.240 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.178 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.362375 * X + -0.019751 * Y + -0.931823 * Z + 37.869156 Y_new = -0.741974 * X + 0.611167 * Y + 0.275591 * Z + 78.101341 Z_new = 0.564056 * X + 0.791255 * Y + -0.236126 * Z + 3.839022 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.025116 -0.599290 1.860803 [DEG: -116.0306 -34.3368 106.6162 ] ZXZ: -1.858353 1.809174 0.619306 [DEG: -106.4758 103.6580 35.4836 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS096_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS096_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 37 1.61 79.767 2.18 REMARK ---------------------------------------------------------- MOLECULE T0543TS096_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2rh6_A 2gso_A 2gsn_A 2o3b_A 1ei6_A ATOM 422 N GLY 56 35.364 73.087 20.003 1.00 0.00 N ATOM 423 CA GLY 56 34.244 72.217 19.804 1.00 0.00 C ATOM 424 C GLY 56 33.469 72.865 18.707 1.00 0.00 C ATOM 425 O GLY 56 33.213 72.259 17.669 1.00 0.00 O ATOM 426 N SER 57 33.191 74.172 18.910 1.00 0.00 N ATOM 427 CA SER 57 32.500 75.064 18.018 1.00 0.00 C ATOM 428 CB SER 57 33.405 75.721 16.955 1.00 0.00 C ATOM 429 OG SER 57 33.747 74.783 15.952 1.00 0.00 O ATOM 430 C SER 57 31.327 74.427 17.337 1.00 0.00 C ATOM 431 O SER 57 31.483 73.631 16.411 1.00 0.00 O ATOM 432 N CYS 58 30.106 74.750 17.819 1.00 0.00 N ATOM 433 CA CYS 58 28.891 74.238 17.252 1.00 0.00 C ATOM 434 CB CYS 58 27.693 75.017 17.800 1.00 0.00 C ATOM 435 SG CYS 58 26.141 74.123 17.623 1.00 0.00 S ATOM 436 C CYS 58 28.941 74.552 15.786 1.00 0.00 C ATOM 437 O CYS 58 28.899 73.661 14.941 1.00 0.00 O ATOM 438 N LYS 59 28.978 75.859 15.476 1.00 0.00 N ATOM 439 CA LYS 59 29.257 76.431 14.189 1.00 0.00 C ATOM 440 CB LYS 59 30.762 76.430 13.873 1.00 0.00 C ATOM 441 CG LYS 59 31.312 75.009 13.758 1.00 0.00 C ATOM 442 CD LYS 59 32.696 74.893 13.115 1.00 0.00 C ATOM 443 CE LYS 59 33.221 73.454 13.108 1.00 0.00 C ATOM 444 NZ LYS 59 32.106 72.521 12.833 1.00 0.00 N ATOM 445 C LYS 59 28.588 75.780 13.010 1.00 0.00 C ATOM 446 O LYS 59 29.165 75.830 11.934 1.00 0.00 O ATOM 447 N GLY 60 27.356 75.250 13.066 1.00 0.00 N ATOM 448 CA GLY 60 26.814 74.659 11.855 1.00 0.00 C ATOM 449 C GLY 60 26.345 73.264 12.160 1.00 0.00 C ATOM 450 O GLY 60 25.723 72.599 11.328 1.00 0.00 O ATOM 451 N ARG 61 26.739 72.785 13.347 1.00 0.00 N ATOM 452 CA ARG 61 26.467 71.554 14.032 1.00 0.00 C ATOM 453 CB ARG 61 27.639 71.119 14.929 1.00 0.00 C ATOM 454 CG ARG 61 28.884 70.787 14.101 1.00 0.00 C ATOM 455 CD ARG 61 30.027 70.194 14.918 1.00 0.00 C ATOM 456 NE ARG 61 29.565 68.857 15.386 1.00 0.00 N ATOM 457 CZ ARG 61 30.390 68.036 16.101 1.00 0.00 C ATOM 458 NH1 ARG 61 31.656 68.427 16.423 1.00 0.00 H ATOM 459 NH2 ARG 61 29.939 66.806 16.484 1.00 0.00 H ATOM 460 C ARG 61 25.198 71.610 14.852 1.00 0.00 C ATOM 461 O ARG 61 24.940 70.690 15.625 1.00 0.00 O ATOM 462 N CYS 62 24.380 72.677 14.747 1.00 0.00 N ATOM 463 CA CYS 62 23.345 73.034 15.694 1.00 0.00 C ATOM 464 CB CYS 62 22.352 74.049 15.107 1.00 0.00 C ATOM 465 SG CYS 62 21.528 73.453 13.597 1.00 0.00 S ATOM 466 C CYS 62 22.537 71.881 16.223 1.00 0.00 C ATOM 467 O CYS 62 22.244 71.877 17.418 1.00 0.00 O ATOM 468 N PHE 63 22.088 70.910 15.405 1.00 0.00 N ATOM 469 CA PHE 63 21.395 69.830 16.054 1.00 0.00 C ATOM 470 CB PHE 63 19.918 69.714 15.642 1.00 0.00 C ATOM 471 CG PHE 63 19.202 70.855 16.278 1.00 0.00 C ATOM 472 CD1 PHE 63 19.091 72.075 15.646 1.00 0.00 C ATOM 473 CD2 PHE 63 18.645 70.701 17.526 1.00 0.00 C ATOM 474 CE1 PHE 63 18.435 73.120 16.249 1.00 0.00 C ATOM 475 CE2 PHE 63 17.989 71.743 18.130 1.00 0.00 C ATOM 476 CZ PHE 63 17.878 72.955 17.494 1.00 0.00 C ATOM 477 C PHE 63 22.075 68.527 15.730 1.00 0.00 C ATOM 478 O PHE 63 21.992 68.029 14.607 1.00 0.00 O ATOM 479 N GLU 64 22.765 67.932 16.731 1.00 0.00 N ATOM 480 CA GLU 64 23.412 66.657 16.564 1.00 0.00 C ATOM 481 CB GLU 64 24.942 66.776 16.496 1.00 0.00 C ATOM 482 CG GLU 64 25.639 65.549 15.913 1.00 0.00 C ATOM 483 CD GLU 64 27.020 66.009 15.466 1.00 0.00 C ATOM 484 OE1 GLU 64 27.217 67.248 15.368 1.00 0.00 O ATOM 485 OE2 GLU 64 27.891 65.134 15.219 1.00 0.00 O ATOM 486 C GLU 64 23.052 65.895 17.805 1.00 0.00 C ATOM 487 O GLU 64 23.498 66.235 18.897 1.00 0.00 O ATOM 488 N LEU 65 22.305 64.782 17.663 1.00 0.00 N ATOM 489 CA LEU 65 21.639 64.234 18.812 1.00 0.00 C ATOM 490 CB LEU 65 20.255 63.666 18.441 1.00 0.00 C ATOM 491 CG LEU 65 19.216 64.724 18.013 1.00 0.00 C ATOM 492 CD1 LEU 65 19.727 65.613 16.865 1.00 0.00 C ATOM 493 CD2 LEU 65 17.876 64.053 17.667 1.00 0.00 C ATOM 494 C LEU 65 22.351 63.146 19.578 1.00 0.00 C ATOM 495 O LEU 65 22.523 62.020 19.112 1.00 0.00 O ATOM 496 N GLN 66 22.755 63.518 20.808 1.00 0.00 N ATOM 497 CA GLN 66 23.145 62.703 21.935 1.00 0.00 C ATOM 498 CB GLN 66 21.918 62.300 22.765 1.00 0.00 C ATOM 499 CG GLN 66 22.287 61.579 24.050 1.00 0.00 C ATOM 500 CD GLN 66 22.870 62.618 24.994 1.00 0.00 C ATOM 501 OE1 GLN 66 22.740 63.818 24.765 1.00 0.00 O ATOM 502 NE2 GLN 66 23.545 62.147 26.074 1.00 0.00 N ATOM 503 C GLN 66 23.955 61.457 21.696 1.00 0.00 C ATOM 504 O GLN 66 23.434 60.357 21.873 1.00 0.00 O ATOM 505 N GLU 67 25.243 61.564 21.307 1.00 0.00 N ATOM 506 CA GLU 67 26.050 60.373 21.272 1.00 0.00 C ATOM 507 CB GLU 67 27.202 60.369 20.248 1.00 0.00 C ATOM 508 CG GLU 67 26.757 60.133 18.797 1.00 0.00 C ATOM 509 CD GLU 67 26.438 61.474 18.161 1.00 0.00 C ATOM 510 OE1 GLU 67 25.809 62.324 18.845 1.00 0.00 O ATOM 511 OE2 GLU 67 26.826 61.671 16.977 1.00 0.00 O ATOM 512 C GLU 67 26.644 60.192 22.634 1.00 0.00 C ATOM 513 O GLU 67 26.586 61.085 23.481 1.00 0.00 O ATOM 514 N VAL 68 27.184 58.989 22.889 1.00 0.00 N ATOM 515 CA VAL 68 27.812 58.708 24.144 1.00 0.00 C ATOM 516 CB VAL 68 27.373 57.396 24.712 1.00 0.00 C ATOM 517 CG1 VAL 68 28.149 57.190 26.009 1.00 0.00 C ATOM 518 CG2 VAL 68 25.846 57.386 24.912 1.00 0.00 C ATOM 519 C VAL 68 29.281 58.593 23.869 1.00 0.00 C ATOM 520 O VAL 68 29.718 57.661 23.199 1.00 0.00 O ATOM 521 N GLY 69 30.092 59.530 24.400 1.00 0.00 N ATOM 522 CA GLY 69 31.490 59.441 24.096 1.00 0.00 C ATOM 523 C GLY 69 32.118 60.788 24.285 1.00 0.00 C ATOM 524 O GLY 69 31.978 61.437 25.318 1.00 0.00 O ATOM 525 N PRO 70 32.818 61.204 23.264 1.00 0.00 N ATOM 526 CA PRO 70 33.574 62.425 23.336 1.00 0.00 C ATOM 527 CD PRO 70 33.429 60.237 22.367 1.00 0.00 C ATOM 528 CB PRO 70 34.480 62.412 22.105 1.00 0.00 C ATOM 529 CG PRO 70 34.710 60.909 21.847 1.00 0.00 C ATOM 530 C PRO 70 32.789 63.692 23.540 1.00 0.00 C ATOM 531 O PRO 70 31.649 63.840 23.105 1.00 0.00 O ATOM 532 N PRO 71 33.478 64.554 24.237 1.00 0.00 N ATOM 533 CA PRO 71 33.028 65.864 24.665 1.00 0.00 C ATOM 534 CD PRO 71 34.511 64.021 25.112 1.00 0.00 C ATOM 535 CB PRO 71 33.973 66.267 25.799 1.00 0.00 C ATOM 536 CG PRO 71 34.529 64.940 26.336 1.00 0.00 C ATOM 537 C PRO 71 33.030 66.910 23.586 1.00 0.00 C ATOM 538 O PRO 71 32.997 68.094 23.922 1.00 0.00 O ATOM 539 N ASP 72 33.060 66.522 22.302 1.00 0.00 N ATOM 540 CA ASP 72 33.297 67.479 21.259 1.00 0.00 C ATOM 541 CB ASP 72 33.424 66.875 19.843 1.00 0.00 C ATOM 542 CG ASP 72 32.154 66.166 19.402 1.00 0.00 C ATOM 543 OD1 ASP 72 31.276 65.896 20.263 1.00 0.00 O ATOM 544 OD2 ASP 72 32.054 65.877 18.181 1.00 0.00 O ATOM 545 C ASP 72 32.346 68.644 21.257 1.00 0.00 C ATOM 546 O ASP 72 32.801 69.709 20.846 1.00 0.00 O ATOM 547 N CYS 73 31.041 68.521 21.629 1.00 0.00 N ATOM 548 CA CYS 73 30.238 69.736 21.720 1.00 0.00 C ATOM 549 CB CYS 73 30.325 70.692 20.514 1.00 0.00 C ATOM 550 SG CYS 73 30.274 69.797 18.937 1.00 0.00 S ATOM 551 C CYS 73 28.771 69.461 21.802 1.00 0.00 C ATOM 552 O CYS 73 28.048 70.182 22.489 1.00 0.00 O ATOM 553 N ARG 74 28.287 68.530 20.963 1.00 0.00 N ATOM 554 CA ARG 74 26.960 67.960 20.978 1.00 0.00 C ATOM 555 CB ARG 74 26.746 67.002 22.167 1.00 0.00 C ATOM 556 CG ARG 74 27.767 65.862 22.283 1.00 0.00 C ATOM 557 CD ARG 74 27.558 64.677 21.331 1.00 0.00 C ATOM 558 NE ARG 74 28.753 64.556 20.443 1.00 0.00 N ATOM 559 CZ ARG 74 28.647 64.760 19.098 1.00 0.00 C ATOM 560 NH1 ARG 74 27.453 65.130 18.552 1.00 0.00 H ATOM 561 NH2 ARG 74 29.733 64.579 18.291 1.00 0.00 H ATOM 562 C ARG 74 25.822 68.945 21.044 1.00 0.00 C ATOM 563 O ARG 74 24.907 68.742 21.837 1.00 0.00 O ATOM 564 N CYS 75 25.769 69.978 20.187 1.00 0.00 N ATOM 565 CA CYS 75 24.708 70.949 20.279 1.00 0.00 C ATOM 566 CB CYS 75 24.755 71.972 19.146 1.00 0.00 C ATOM 567 SG CYS 75 26.297 72.898 19.218 1.00 0.00 S ATOM 568 C CYS 75 23.353 70.309 20.208 1.00 0.00 C ATOM 569 O CYS 75 23.008 69.653 19.227 1.00 0.00 O ATOM 570 N ASP 76 22.543 70.499 21.279 1.00 0.00 N ATOM 571 CA ASP 76 21.177 70.034 21.298 1.00 0.00 C ATOM 572 CB ASP 76 21.025 68.497 21.335 1.00 0.00 C ATOM 573 CG ASP 76 19.587 68.137 20.979 1.00 0.00 C ATOM 574 OD1 ASP 76 18.987 68.870 20.144 1.00 0.00 O ATOM 575 OD2 ASP 76 19.068 67.129 21.530 1.00 0.00 O ATOM 576 C ASP 76 20.522 70.559 22.542 1.00 0.00 C ATOM 577 O ASP 76 21.184 70.994 23.485 1.00 0.00 O ATOM 578 N ASN 77 19.178 70.537 22.584 1.00 0.00 N ATOM 579 CA ASN 77 18.510 70.939 23.783 1.00 0.00 C ATOM 580 CB ASN 77 16.987 70.800 23.689 1.00 0.00 C ATOM 581 CG ASN 77 16.483 71.772 22.635 1.00 0.00 C ATOM 582 OD1 ASN 77 15.542 71.465 21.906 1.00 0.00 O ATOM 583 ND2 ASN 77 17.113 72.974 22.555 1.00 0.00 N ATOM 584 C ASN 77 18.969 69.970 24.828 1.00 0.00 C ATOM 585 O ASN 77 19.114 70.310 26.002 1.00 0.00 O ATOM 586 N LEU 78 19.202 68.717 24.395 1.00 0.00 N ATOM 587 CA LEU 78 19.628 67.644 25.243 1.00 0.00 C ATOM 588 CB LEU 78 19.828 66.317 24.489 1.00 0.00 C ATOM 589 CG LEU 78 18.541 65.761 23.860 1.00 0.00 C ATOM 590 CD1 LEU 78 18.783 64.361 23.273 1.00 0.00 C ATOM 591 CD2 LEU 78 17.366 65.810 24.849 1.00 0.00 C ATOM 592 C LEU 78 20.950 67.994 25.845 1.00 0.00 C ATOM 593 O LEU 78 21.181 67.720 27.020 1.00 0.00 O ATOM 594 N CYS 79 21.854 68.613 25.059 1.00 0.00 N ATOM 595 CA CYS 79 23.168 68.908 25.558 1.00 0.00 C ATOM 596 CB CYS 79 24.201 69.359 24.500 1.00 0.00 C ATOM 597 SG CYS 79 24.020 71.065 23.905 1.00 0.00 S ATOM 598 C CYS 79 23.081 69.913 26.662 1.00 0.00 C ATOM 599 O CYS 79 23.997 69.997 27.474 1.00 0.00 O ATOM 600 N LYS 80 22.043 70.778 26.678 1.00 0.00 N ATOM 601 CA LYS 80 21.882 71.655 27.804 1.00 0.00 C ATOM 602 CB LYS 80 20.827 72.755 27.598 1.00 0.00 C ATOM 603 CG LYS 80 21.187 73.758 26.497 1.00 0.00 C ATOM 604 CD LYS 80 22.570 74.397 26.643 1.00 0.00 C ATOM 605 CE LYS 80 22.711 75.356 27.825 1.00 0.00 C ATOM 606 NZ LYS 80 23.987 76.097 27.713 1.00 0.00 N ATOM 607 C LYS 80 21.482 70.834 28.997 1.00 0.00 C ATOM 608 O LYS 80 21.972 71.058 30.105 1.00 0.00 O ATOM 609 N SER 81 20.582 69.845 28.792 1.00 0.00 N ATOM 610 CA SER 81 20.096 69.005 29.853 1.00 0.00 C ATOM 611 CB SER 81 19.101 67.943 29.343 1.00 0.00 C ATOM 612 OG SER 81 18.005 68.567 28.687 1.00 0.00 O ATOM 613 C SER 81 21.268 68.278 30.445 1.00 0.00 C ATOM 614 O SER 81 21.425 68.221 31.663 1.00 0.00 O ATOM 615 N TYR 82 22.100 67.691 29.564 1.00 0.00 N ATOM 616 CA TYR 82 23.319 66.967 29.815 1.00 0.00 C ATOM 617 CB TYR 82 23.743 66.047 28.661 1.00 0.00 C ATOM 618 CG TYR 82 22.822 64.877 28.769 1.00 0.00 C ATOM 619 CD1 TYR 82 23.155 63.841 29.608 1.00 0.00 C ATOM 620 CD2 TYR 82 21.635 64.816 28.080 1.00 0.00 C ATOM 621 CE1 TYR 82 22.335 62.749 29.746 1.00 0.00 C ATOM 622 CE2 TYR 82 20.807 63.724 28.212 1.00 0.00 C ATOM 623 CZ TYR 82 21.155 62.691 29.045 1.00 0.00 C ATOM 624 OH TYR 82 20.310 61.570 29.186 1.00 0.00 H ATOM 625 C TYR 82 24.446 67.880 30.211 1.00 0.00 C ATOM 626 O TYR 82 25.493 67.423 30.662 1.00 0.00 O ATOM 627 N SER 83 24.318 69.186 29.928 1.00 0.00 N ATOM 628 CA SER 83 25.332 70.144 30.259 1.00 0.00 C ATOM 629 CB SER 83 25.524 70.361 31.767 1.00 0.00 C ATOM 630 OG SER 83 24.416 71.088 32.278 1.00 0.00 O ATOM 631 C SER 83 26.626 69.750 29.628 1.00 0.00 C ATOM 632 O SER 83 27.691 69.824 30.243 1.00 0.00 O ATOM 633 N SER 84 26.542 69.298 28.363 1.00 0.00 N ATOM 634 CA SER 84 27.708 68.983 27.589 1.00 0.00 C ATOM 635 CB SER 84 27.719 67.513 27.131 1.00 0.00 C ATOM 636 OG SER 84 27.690 66.642 28.254 1.00 0.00 O ATOM 637 C SER 84 27.601 69.813 26.345 1.00 0.00 C ATOM 638 O SER 84 27.736 69.313 25.229 1.00 0.00 O ATOM 639 N CYS 85 27.408 71.133 26.527 1.00 0.00 N ATOM 640 CA CYS 85 27.217 72.039 25.429 1.00 0.00 C ATOM 641 CB CYS 85 26.006 72.957 25.666 1.00 0.00 C ATOM 642 SG CYS 85 26.135 73.847 27.252 1.00 0.00 S ATOM 643 C CYS 85 28.422 72.927 25.321 1.00 0.00 C ATOM 644 O CYS 85 29.151 73.144 26.285 1.00 0.00 O ATOM 645 N CYS 86 28.677 73.417 24.096 1.00 0.00 N ATOM 646 CA CYS 86 29.690 74.399 23.839 1.00 0.00 C ATOM 647 CB CYS 86 30.201 74.332 22.388 1.00 0.00 C ATOM 648 SG CYS 86 28.845 74.106 21.197 1.00 0.00 S ATOM 649 C CYS 86 29.033 75.726 24.112 1.00 0.00 C ATOM 650 O CYS 86 27.847 75.766 24.434 1.00 0.00 O ATOM 651 N HIS 87 29.820 76.822 24.113 1.00 0.00 N ATOM 652 CA HIS 87 29.363 78.174 24.321 1.00 0.00 C ATOM 653 ND1 HIS 87 31.360 79.240 26.927 1.00 0.00 N ATOM 654 CG HIS 87 31.353 78.637 25.693 1.00 0.00 C ATOM 655 CB HIS 87 30.555 79.114 24.526 1.00 0.00 C ATOM 656 NE2 HIS 87 32.648 77.436 27.090 1.00 0.00 N ATOM 657 CD2 HIS 87 32.146 77.538 25.806 1.00 0.00 C ATOM 658 CE1 HIS 87 32.151 78.479 27.727 1.00 0.00 C ATOM 659 C HIS 87 28.608 78.663 23.126 1.00 0.00 C ATOM 660 O HIS 87 27.523 79.233 23.241 1.00 0.00 O ATOM 661 N ASP 88 29.181 78.424 21.931 1.00 0.00 N ATOM 662 CA ASP 88 28.609 78.853 20.689 1.00 0.00 C ATOM 663 CB ASP 88 29.556 78.833 19.461 1.00 0.00 C ATOM 664 CG ASP 88 30.057 77.445 19.112 1.00 0.00 C ATOM 665 OD1 ASP 88 29.625 76.466 19.775 1.00 0.00 O ATOM 666 OD2 ASP 88 30.886 77.350 18.166 1.00 0.00 O ATOM 667 C ASP 88 27.364 78.064 20.451 1.00 0.00 C ATOM 668 O ASP 88 26.623 78.327 19.504 1.00 0.00 O ATOM 669 N PHE 89 27.138 77.022 21.269 1.00 0.00 N ATOM 670 CA PHE 89 25.933 76.250 21.167 1.00 0.00 C ATOM 671 CB PHE 89 25.827 75.163 22.255 1.00 0.00 C ATOM 672 CG PHE 89 24.400 74.721 22.305 1.00 0.00 C ATOM 673 CD1 PHE 89 23.884 73.794 21.429 1.00 0.00 C ATOM 674 CD2 PHE 89 23.562 75.255 23.259 1.00 0.00 C ATOM 675 CE1 PHE 89 22.559 73.424 21.512 1.00 0.00 C ATOM 676 CE2 PHE 89 22.242 74.892 23.343 1.00 0.00 C ATOM 677 CZ PHE 89 21.732 73.965 22.468 1.00 0.00 C ATOM 678 C PHE 89 24.744 77.154 21.344 1.00 0.00 C ATOM 679 O PHE 89 23.813 77.125 20.542 1.00 0.00 O ATOM 680 N ASP 90 24.741 77.994 22.392 1.00 0.00 N ATOM 681 CA ASP 90 23.586 78.804 22.677 1.00 0.00 C ATOM 682 CB ASP 90 23.796 79.743 23.880 1.00 0.00 C ATOM 683 CG ASP 90 23.843 78.930 25.162 1.00 0.00 C ATOM 684 OD1 ASP 90 23.381 77.759 25.138 1.00 0.00 O ATOM 685 OD2 ASP 90 24.341 79.471 26.184 1.00 0.00 O ATOM 686 C ASP 90 23.299 79.719 21.526 1.00 0.00 C ATOM 687 O ASP 90 22.155 79.830 21.084 1.00 0.00 O ATOM 688 N GLU 91 24.333 80.403 21.002 1.00 0.00 N ATOM 689 CA GLU 91 24.066 81.362 19.972 1.00 0.00 C ATOM 690 CB GLU 91 25.302 82.175 19.548 1.00 0.00 C ATOM 691 CG GLU 91 25.135 82.860 18.182 1.00 0.00 C ATOM 692 CD GLU 91 24.043 83.923 18.226 1.00 0.00 C ATOM 693 OE1 GLU 91 24.117 84.838 19.084 1.00 0.00 O ATOM 694 OE2 GLU 91 23.118 83.838 17.370 1.00 0.00 O ATOM 695 C GLU 91 23.543 80.706 18.744 1.00 0.00 C ATOM 696 O GLU 91 22.575 81.179 18.153 1.00 0.00 O ATOM 697 N LEU 92 24.180 79.608 18.305 1.00 0.00 N ATOM 698 CA LEU 92 23.758 79.036 17.069 1.00 0.00 C ATOM 699 CB LEU 92 24.745 77.958 16.618 1.00 0.00 C ATOM 700 CG LEU 92 24.640 77.484 15.159 1.00 0.00 C ATOM 701 CD1 LEU 92 25.590 76.309 14.966 1.00 0.00 C ATOM 702 CD2 LEU 92 23.217 77.150 14.692 1.00 0.00 C ATOM 703 C LEU 92 22.394 78.413 17.202 1.00 0.00 C ATOM 704 O LEU 92 21.483 78.718 16.433 1.00 0.00 O ATOM 705 N CYS 93 22.240 77.509 18.187 1.00 0.00 N ATOM 706 CA CYS 93 21.077 76.680 18.379 1.00 0.00 C ATOM 707 CB CYS 93 21.376 75.515 19.327 1.00 0.00 C ATOM 708 SG CYS 93 22.682 74.468 18.626 1.00 0.00 S ATOM 709 C CYS 93 19.870 77.403 18.883 1.00 0.00 C ATOM 710 O CYS 93 18.753 77.132 18.445 1.00 0.00 O ATOM 711 N LEU 94 20.062 78.367 19.795 1.00 0.00 N ATOM 712 CA LEU 94 18.959 79.012 20.453 1.00 0.00 C ATOM 713 CB LEU 94 19.428 80.123 21.410 1.00 0.00 C ATOM 714 CG LEU 94 18.284 80.860 22.138 1.00 0.00 C ATOM 715 CD1 LEU 94 17.546 79.940 23.120 1.00 0.00 C ATOM 716 CD2 LEU 94 18.782 82.155 22.800 1.00 0.00 C ATOM 717 C LEU 94 18.069 79.662 19.445 1.00 0.00 C ATOM 718 O LEU 94 16.846 79.661 19.588 1.00 0.00 O ATOM 719 N LYS 95 18.274 76.761 18.414 1.00 0.00 N ATOM 720 H LYS 95 18.075 77.136 19.337 1.00 0.00 H ATOM 721 CA LYS 95 17.535 77.331 17.279 1.00 0.00 C ATOM 722 HA LYS 95 17.423 76.510 16.572 1.00 0.00 H ATOM 723 CB LYS 95 16.082 77.739 17.631 1.00 0.00 C ATOM 724 HB1 LYS 95 16.088 78.491 18.412 1.00 0.00 H ATOM 725 HB2 LYS 95 15.577 76.860 18.031 1.00 0.00 H ATOM 726 CG LYS 95 15.226 78.289 16.463 1.00 0.00 C ATOM 727 HG1 LYS 95 15.490 79.330 16.283 1.00 0.00 H ATOM 728 HG2 LYS 95 14.187 78.297 16.787 1.00 0.00 H ATOM 729 CD LYS 95 15.351 77.514 15.136 1.00 0.00 C ATOM 730 HD1 LYS 95 15.124 76.459 15.301 1.00 0.00 H ATOM 731 HD2 LYS 95 16.377 77.592 14.774 1.00 0.00 H ATOM 732 CE LYS 95 14.439 78.100 14.048 1.00 0.00 C ATOM 733 HE1 LYS 95 14.998 78.127 13.108 1.00 0.00 H ATOM 734 HE2 LYS 95 14.174 79.124 14.324 1.00 0.00 H ATOM 735 NZ LYS 95 13.217 77.286 13.863 1.00 0.00 N ATOM 736 HZ1 LYS 95 12.736 77.162 14.762 1.00 0.00 H ATOM 737 HZ2 LYS 95 12.543 77.689 13.236 1.00 0.00 H ATOM 738 HZ3 LYS 95 13.444 76.347 13.546 1.00 0.00 H ATOM 739 C LYS 95 18.360 78.368 16.513 1.00 0.00 C ATOM 740 O LYS 95 17.945 79.509 16.317 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 67.96 51.3 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 71.36 53.6 56 100.0 56 ARMSMC BURIED . . . . . . . . 58.40 45.5 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.75 52.8 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 75.79 51.4 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 76.83 48.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 69.80 63.6 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.50 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 57.54 47.1 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 77.26 44.4 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 57.96 40.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 31.25 66.7 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 29.46 75.0 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 23.08 71.4 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 50.29 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.58 0.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 72.58 0.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 73.43 0.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 69.06 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.18 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.18 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0544 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.21 29 100.0 29 CRMSCA BURIED . . . . . . . . 2.09 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.31 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.35 142 100.0 142 CRMSMC BURIED . . . . . . . . 2.21 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.37 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 3.87 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.46 103 100.0 103 CRMSSC BURIED . . . . . . . . 4.14 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.38 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.45 219 100.0 219 CRMSALL BURIED . . . . . . . . 3.20 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.719 1.000 0.500 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 1.806 1.000 0.500 29 100.0 29 ERRCA BURIED . . . . . . . . 1.489 1.000 0.500 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.838 1.000 0.500 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 1.945 1.000 0.500 142 100.0 142 ERRMC BURIED . . . . . . . . 1.564 1.000 0.500 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.381 1.000 0.500 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 2.970 1.000 0.500 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 3.577 1.000 0.500 103 100.0 103 ERRSC BURIED . . . . . . . . 2.877 1.000 0.500 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.523 1.000 0.500 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.666 1.000 0.500 219 100.0 219 ERRALL BURIED . . . . . . . . 2.149 1.000 0.500 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 14 28 34 38 40 40 40 DISTCA CA (P) 35.00 70.00 85.00 95.00 100.00 40 DISTCA CA (RMS) 0.62 1.13 1.46 1.83 2.18 DISTCA ALL (N) 77 167 222 268 298 303 303 DISTALL ALL (P) 25.41 55.12 73.27 88.45 98.35 303 DISTALL ALL (RMS) 0.66 1.22 1.62 2.21 3.07 DISTALL END of the results output