####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 373), selected 40 , name T0543TS094_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS094_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.31 2.31 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 56 - 93 1.97 2.38 LCS_AVERAGE: 93.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 72 - 93 0.95 2.40 LCS_AVERAGE: 36.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 7 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 7 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 7 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 7 38 40 13 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 7 38 40 13 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 7 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 7 38 40 13 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 4 38 40 3 4 8 12 32 33 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 4 38 40 3 18 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 4 38 40 3 4 4 22 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 4 38 40 3 4 4 10 26 27 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 4 38 40 3 9 26 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 4 38 40 3 4 4 5 7 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 4 38 40 0 3 4 12 21 33 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 4 38 40 3 3 5 7 11 17 22 34 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 19 38 40 4 12 22 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 22 38 40 3 10 18 30 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 22 38 40 4 12 26 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 22 38 40 13 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 22 38 40 8 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 22 38 40 8 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 22 38 40 8 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 22 38 40 8 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 22 38 40 10 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 22 38 40 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 22 38 40 10 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 22 38 40 8 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 22 38 40 10 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 22 38 40 10 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 4 25 40 3 4 8 8 19 30 35 36 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 3 25 40 0 3 4 4 4 4 26 36 36 38 39 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 76.77 ( 36.94 93.38 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 26 28 31 33 34 35 36 38 39 39 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 35.00 65.00 70.00 77.50 82.50 85.00 87.50 90.00 95.00 97.50 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.65 0.72 1.03 1.18 1.27 1.39 1.54 1.89 2.12 2.10 2.31 2.31 2.31 2.31 2.31 2.31 2.31 2.31 2.31 GDT RMS_ALL_AT 2.59 2.46 2.42 2.39 2.39 2.39 2.37 2.39 2.35 2.34 2.33 2.31 2.31 2.31 2.31 2.31 2.31 2.31 2.31 2.31 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 0.687 0 0.382 0.382 1.346 88.214 88.214 LGA S 57 S 57 0.576 0 0.096 0.101 0.712 90.476 90.476 LGA C 58 C 58 0.684 0 0.155 0.748 1.840 88.214 86.032 LGA K 59 K 59 0.756 0 0.034 0.109 1.800 92.857 85.608 LGA G 60 G 60 0.821 0 0.153 0.153 1.073 88.214 88.214 LGA R 61 R 61 0.503 0 0.120 0.260 1.107 92.857 89.697 LGA C 62 C 62 0.640 0 0.633 0.583 1.606 88.452 87.619 LGA F 63 F 63 3.622 0 0.261 1.519 11.305 55.595 25.281 LGA E 64 E 64 1.444 0 0.608 0.862 3.632 71.190 62.169 LGA L 65 L 65 2.633 0 0.623 0.594 4.308 54.286 56.667 LGA Q 66 Q 66 4.070 0 0.033 0.764 11.180 56.548 28.201 LGA E 67 E 67 2.145 0 0.064 1.176 9.798 70.952 37.460 LGA V 68 V 68 2.964 0 0.600 0.662 7.206 55.595 38.163 LGA G 69 G 69 4.961 0 0.465 0.465 5.186 31.786 31.786 LGA P 70 P 70 6.814 0 0.096 0.204 10.679 18.571 11.224 LGA P 71 P 71 3.080 0 0.216 0.308 4.342 60.357 52.177 LGA D 72 D 72 2.357 3 0.592 0.592 3.792 61.071 35.952 LGA C 73 C 73 0.621 0 0.191 0.215 1.191 88.214 87.460 LGA R 74 R 74 0.545 0 0.059 0.808 3.535 90.476 78.009 LGA C 75 C 75 0.327 0 0.170 0.164 1.297 92.976 90.635 LGA D 76 D 76 0.855 0 0.031 0.971 4.918 90.595 73.690 LGA N 77 N 77 1.982 0 0.085 0.385 3.623 72.857 61.488 LGA L 78 L 78 1.023 0 0.141 1.244 3.124 81.429 73.631 LGA C 79 C 79 0.724 0 0.023 0.084 1.090 90.476 88.968 LGA K 80 K 80 0.651 0 0.022 1.017 3.666 90.476 80.370 LGA S 81 S 81 0.808 0 0.037 0.651 2.252 90.476 86.190 LGA Y 82 Y 82 0.837 0 0.157 0.217 2.156 92.857 80.992 LGA S 83 S 83 0.954 0 0.266 0.237 1.939 90.476 84.603 LGA S 84 S 84 0.891 0 0.075 0.070 1.089 92.976 90.635 LGA C 85 C 85 0.508 0 0.066 0.143 0.955 97.619 95.238 LGA C 86 C 86 0.524 0 0.051 0.083 0.664 90.476 90.476 LGA H 87 H 87 0.877 0 0.084 0.147 1.393 90.476 85.048 LGA D 88 D 88 0.376 0 0.167 1.166 3.881 100.000 83.929 LGA F 89 F 89 0.396 0 0.077 0.087 0.726 97.619 95.671 LGA D 90 D 90 0.812 0 0.055 0.774 2.510 86.190 80.774 LGA E 91 E 91 0.999 0 0.125 0.753 1.664 88.214 84.497 LGA L 92 L 92 0.789 0 0.168 0.286 2.143 90.476 82.798 LGA C 93 C 93 0.819 0 0.628 0.568 1.741 81.667 81.667 LGA L 94 L 94 5.289 0 0.581 0.544 11.649 22.976 13.333 LGA K 95 K 95 6.670 0 0.151 0.880 15.287 13.452 8.201 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.313 2.251 3.510 77.217 69.331 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 36 1.54 83.125 88.004 2.195 LGA_LOCAL RMSD: 1.540 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.392 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.313 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.341837 * X + 0.492748 * Y + 0.800217 * Z + 6.248780 Y_new = -0.132926 * X + -0.817599 * Y + 0.560235 * Z + 75.084839 Z_new = 0.930311 * X + -0.297878 * Y + -0.213986 * Z + 19.673180 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.370864 -1.195260 -2.193744 [DEG: -21.2489 -68.4833 -125.6923 ] ZXZ: 2.181592 1.786451 1.880674 [DEG: 124.9960 102.3561 107.7547 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS094_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS094_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 36 1.54 88.004 2.31 REMARK ---------------------------------------------------------- MOLECULE T0543TS094_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 520 N GLY 56 35.829 72.760 19.003 1.00 15.00 N ATOM 521 CA GLY 56 34.615 72.099 19.361 1.00 15.00 C ATOM 522 C GLY 56 33.606 73.183 19.250 1.00 15.00 C ATOM 523 O GLY 56 33.309 73.875 20.224 1.00 15.00 O ATOM 524 H GLY 56 35.850 73.657 18.935 1.00 15.00 H ATOM 525 N SER 57 33.051 73.357 18.041 1.00 15.00 N ATOM 526 CA SER 57 32.131 74.428 17.838 1.00 15.00 C ATOM 527 C SER 57 30.855 73.823 17.388 1.00 15.00 C ATOM 528 O SER 57 30.836 72.804 16.701 1.00 15.00 O ATOM 529 H SER 57 33.255 72.804 17.361 1.00 15.00 H ATOM 530 CB SER 57 32.687 75.428 16.822 1.00 15.00 C ATOM 531 HG SER 57 31.569 76.858 17.249 1.00 15.00 H ATOM 532 OG SER 57 31.748 76.452 16.547 1.00 15.00 O ATOM 533 N CYS 58 29.748 74.432 17.827 1.00 15.00 N ATOM 534 CA CYS 58 28.437 73.977 17.501 1.00 15.00 C ATOM 535 C CYS 58 28.055 74.333 16.095 1.00 15.00 C ATOM 536 O CYS 58 27.192 73.667 15.527 1.00 15.00 O ATOM 537 H CYS 58 29.856 75.157 18.349 1.00 15.00 H ATOM 538 CB CYS 58 27.411 74.559 18.475 1.00 15.00 C ATOM 539 SG CYS 58 25.742 73.885 18.293 1.00 15.00 S ATOM 540 N LYS 59 28.675 75.374 15.490 1.00 15.00 N ATOM 541 CA LYS 59 28.138 75.905 14.262 1.00 15.00 C ATOM 542 C LYS 59 27.952 74.870 13.201 1.00 15.00 C ATOM 543 O LYS 59 28.865 74.128 12.841 1.00 15.00 O ATOM 544 H LYS 59 29.417 75.734 15.850 1.00 15.00 H ATOM 545 CB LYS 59 29.041 77.015 13.718 1.00 15.00 C ATOM 546 CD LYS 59 29.425 78.813 12.009 1.00 15.00 C ATOM 547 CE LYS 59 28.895 79.483 10.752 1.00 15.00 C ATOM 548 CG LYS 59 28.517 77.677 12.453 1.00 15.00 C ATOM 549 HZ1 LYS 59 29.450 80.949 9.553 1.00 15.00 H ATOM 550 HZ2 LYS 59 30.595 80.251 10.110 1.00 15.00 H ATOM 551 HZ3 LYS 59 29.856 81.198 10.926 1.00 15.00 H ATOM 552 NZ LYS 59 29.789 80.580 10.289 1.00 15.00 N ATOM 553 N GLY 60 26.700 74.809 12.701 1.00 15.00 N ATOM 554 CA GLY 60 26.281 73.948 11.634 1.00 15.00 C ATOM 555 C GLY 60 25.828 72.645 12.214 1.00 15.00 C ATOM 556 O GLY 60 25.129 71.874 11.562 1.00 15.00 O ATOM 557 H GLY 60 26.108 75.364 13.090 1.00 15.00 H ATOM 558 N ARG 61 26.254 72.363 13.457 1.00 15.00 N ATOM 559 CA ARG 61 25.989 71.141 14.162 1.00 15.00 C ATOM 560 C ARG 61 24.616 71.045 14.776 1.00 15.00 C ATOM 561 O ARG 61 24.177 69.949 15.115 1.00 15.00 O ATOM 562 H ARG 61 26.741 73.011 13.848 1.00 15.00 H ATOM 563 CB ARG 61 27.018 70.929 15.274 1.00 15.00 C ATOM 564 CD ARG 61 29.405 70.511 15.927 1.00 15.00 C ATOM 565 HE ARG 61 28.618 68.711 16.336 1.00 15.00 H ATOM 566 NE ARG 61 29.139 69.295 16.694 1.00 15.00 N ATOM 567 CG ARG 61 28.431 70.679 14.772 1.00 15.00 C ATOM 568 CZ ARG 61 29.646 69.046 17.896 1.00 15.00 C ATOM 569 HH11 ARG 61 28.827 67.341 18.145 1.00 15.00 H ATOM 570 HH12 ARG 61 29.677 67.751 19.298 1.00 15.00 H ATOM 571 NH1 ARG 61 29.349 67.913 18.519 1.00 15.00 H ATOM 572 HH21 ARG 61 30.644 70.661 18.069 1.00 15.00 H ATOM 573 HH22 ARG 61 30.778 69.765 19.252 1.00 15.00 H ATOM 574 NH2 ARG 61 30.450 69.928 18.474 1.00 15.00 H ATOM 575 N CYS 62 23.895 72.168 14.958 1.00 15.00 N ATOM 576 CA CYS 62 22.667 72.159 15.715 1.00 15.00 C ATOM 577 C CYS 62 21.652 71.189 15.178 1.00 15.00 C ATOM 578 O CYS 62 20.864 70.643 15.950 1.00 15.00 O ATOM 579 H CYS 62 24.195 72.935 14.595 1.00 15.00 H ATOM 580 CB CYS 62 22.050 73.559 15.751 1.00 15.00 C ATOM 581 SG CYS 62 22.988 74.764 16.717 1.00 15.00 S ATOM 582 N PHE 63 21.584 70.977 13.852 1.00 15.00 N ATOM 583 CA PHE 63 20.636 70.046 13.296 1.00 15.00 C ATOM 584 C PHE 63 21.007 68.608 13.556 1.00 15.00 C ATOM 585 O PHE 63 20.136 67.744 13.622 1.00 15.00 O ATOM 586 H PHE 63 22.144 71.427 13.310 1.00 15.00 H ATOM 587 CB PHE 63 20.495 70.263 11.788 1.00 15.00 C ATOM 588 CG PHE 63 19.469 69.376 11.142 1.00 15.00 C ATOM 589 CZ PHE 63 17.576 67.731 9.944 1.00 15.00 C ATOM 590 CD1 PHE 63 18.117 69.623 11.306 1.00 15.00 C ATOM 591 CE1 PHE 63 17.173 68.807 10.712 1.00 15.00 C ATOM 592 CD2 PHE 63 19.856 68.294 10.370 1.00 15.00 C ATOM 593 CE2 PHE 63 18.912 67.479 9.775 1.00 15.00 C ATOM 594 N GLU 64 22.314 68.326 13.714 1.00 15.00 N ATOM 595 CA GLU 64 22.930 67.023 13.751 1.00 15.00 C ATOM 596 C GLU 64 22.354 66.091 14.785 1.00 15.00 C ATOM 597 O GLU 64 22.072 64.943 14.444 1.00 15.00 O ATOM 598 H GLU 64 22.819 69.066 13.803 1.00 15.00 H ATOM 599 CB GLU 64 24.434 67.148 14.002 1.00 15.00 C ATOM 600 CD GLU 64 26.681 67.925 13.150 1.00 15.00 C ATOM 601 CG GLU 64 25.213 67.725 12.831 1.00 15.00 C ATOM 602 OE1 GLU 64 27.057 67.784 14.334 1.00 15.00 O ATOM 603 OE2 GLU 64 27.457 68.221 12.218 1.00 15.00 O ATOM 604 N LEU 65 22.178 66.539 16.052 1.00 15.00 N ATOM 605 CA LEU 65 21.693 65.730 17.153 1.00 15.00 C ATOM 606 C LEU 65 22.873 65.262 17.948 1.00 15.00 C ATOM 607 O LEU 65 23.978 65.779 17.804 1.00 15.00 O ATOM 608 H LEU 65 22.386 67.405 16.186 1.00 15.00 H ATOM 609 CB LEU 65 20.864 64.555 16.631 1.00 15.00 C ATOM 610 CG LEU 65 19.584 64.913 15.871 1.00 15.00 C ATOM 611 CD1 LEU 65 18.935 63.664 15.294 1.00 15.00 C ATOM 612 CD2 LEU 65 18.609 65.647 16.778 1.00 15.00 C ATOM 613 N GLN 66 22.649 64.271 18.836 1.00 15.00 N ATOM 614 CA GLN 66 23.678 63.754 19.694 1.00 15.00 C ATOM 615 C GLN 66 24.744 63.127 18.855 1.00 15.00 C ATOM 616 O GLN 66 24.463 62.390 17.912 1.00 15.00 O ATOM 617 H GLN 66 21.816 63.932 18.879 1.00 15.00 H ATOM 618 CB GLN 66 23.093 62.749 20.688 1.00 15.00 C ATOM 619 CD GLN 66 23.463 61.288 22.716 1.00 15.00 C ATOM 620 CG GLN 66 24.093 62.232 21.710 1.00 15.00 C ATOM 621 OE1 GLN 66 22.313 60.878 22.561 1.00 15.00 O ATOM 622 HE21 GLN 66 23.892 60.385 24.379 1.00 15.00 H ATOM 623 HE22 GLN 66 25.054 61.266 23.829 1.00 15.00 H ATOM 624 NE2 GLN 66 24.218 60.942 23.752 1.00 15.00 N ATOM 625 N GLU 67 26.018 63.438 19.176 1.00 15.00 N ATOM 626 CA GLU 67 27.101 62.842 18.456 1.00 15.00 C ATOM 627 C GLU 67 28.126 62.421 19.455 1.00 15.00 C ATOM 628 O GLU 67 28.676 63.236 20.196 1.00 15.00 O ATOM 629 H GLU 67 26.186 64.019 19.842 1.00 15.00 H ATOM 630 CB GLU 67 27.670 63.827 17.432 1.00 15.00 C ATOM 631 CD GLU 67 27.290 65.192 15.342 1.00 15.00 C ATOM 632 CG GLU 67 26.690 64.219 16.338 1.00 15.00 C ATOM 633 OE1 GLU 67 28.055 66.083 15.768 1.00 15.00 O ATOM 634 OE2 GLU 67 26.994 65.065 14.135 1.00 15.00 O ATOM 635 N VAL 68 28.396 61.107 19.491 1.00 15.00 N ATOM 636 CA VAL 68 29.353 60.532 20.384 1.00 15.00 C ATOM 637 C VAL 68 30.710 60.997 19.984 1.00 15.00 C ATOM 638 O VAL 68 31.580 61.212 20.825 1.00 15.00 O ATOM 639 H VAL 68 27.944 60.581 18.917 1.00 15.00 H ATOM 640 CB VAL 68 29.268 58.994 20.389 1.00 15.00 C ATOM 641 CG1 VAL 68 30.408 58.400 21.203 1.00 15.00 C ATOM 642 CG2 VAL 68 27.924 58.536 20.935 1.00 15.00 C ATOM 643 N GLY 69 30.915 61.189 18.669 1.00 15.00 N ATOM 644 CA GLY 69 32.236 61.442 18.189 1.00 15.00 C ATOM 645 C GLY 69 32.848 62.636 18.847 1.00 15.00 C ATOM 646 O GLY 69 33.983 62.512 19.297 1.00 15.00 O ATOM 647 H GLY 69 30.224 61.159 18.093 1.00 15.00 H ATOM 648 N PRO 70 32.220 63.783 18.913 1.00 15.00 N ATOM 649 CA PRO 70 32.906 64.870 19.575 1.00 15.00 C ATOM 650 C PRO 70 32.823 64.845 21.072 1.00 15.00 C ATOM 651 O PRO 70 31.703 64.842 21.581 1.00 15.00 O ATOM 652 CB PRO 70 32.217 66.125 19.036 1.00 15.00 C ATOM 653 CD PRO 70 31.172 64.267 17.949 1.00 15.00 C ATOM 654 CG PRO 70 31.606 65.691 17.746 1.00 15.00 C ATOM 655 N PRO 71 33.919 64.826 21.792 1.00 15.00 N ATOM 656 CA PRO 71 33.829 64.951 23.220 1.00 15.00 C ATOM 657 C PRO 71 33.742 66.396 23.579 1.00 15.00 C ATOM 658 O PRO 71 33.315 66.719 24.686 1.00 15.00 O ATOM 659 CB PRO 71 35.117 64.301 23.730 1.00 15.00 C ATOM 660 CD PRO 71 35.311 64.368 21.346 1.00 15.00 C ATOM 661 CG PRO 71 36.096 64.492 22.621 1.00 15.00 C ATOM 662 N ASP 72 34.146 67.278 22.646 1.00 15.00 N ATOM 663 CA ASP 72 34.280 68.666 22.963 1.00 15.00 C ATOM 664 C ASP 72 32.962 69.161 23.433 1.00 15.00 C ATOM 665 O ASP 72 32.877 69.834 24.460 1.00 15.00 O ATOM 666 H ASP 72 34.332 66.986 21.816 1.00 15.00 H ATOM 667 CB ASP 72 34.776 69.448 21.746 1.00 15.00 C ATOM 668 CG ASP 72 36.229 69.163 21.423 1.00 15.00 C ATOM 669 OD1 ASP 72 37.030 69.015 22.370 1.00 15.00 O ATOM 670 OD2 ASP 72 36.568 69.088 20.222 1.00 15.00 O ATOM 671 N CYS 73 31.884 68.840 22.702 1.00 15.00 N ATOM 672 CA CYS 73 30.639 69.331 23.203 1.00 15.00 C ATOM 673 C CYS 73 29.542 68.762 22.370 1.00 15.00 C ATOM 674 O CYS 73 29.777 68.234 21.284 1.00 15.00 O ATOM 675 H CYS 73 31.904 68.353 21.946 1.00 15.00 H ATOM 676 CB CYS 73 30.621 70.861 23.187 1.00 15.00 C ATOM 677 SG CYS 73 30.748 71.593 21.538 1.00 15.00 S ATOM 678 N ARG 74 28.297 68.894 22.868 1.00 15.00 N ATOM 679 CA ARG 74 27.158 68.380 22.166 1.00 15.00 C ATOM 680 C ARG 74 26.263 69.536 21.809 1.00 15.00 C ATOM 681 O ARG 74 26.103 70.481 22.577 1.00 15.00 O ATOM 682 H ARG 74 28.187 69.314 23.656 1.00 15.00 H ATOM 683 CB ARG 74 26.425 67.343 23.020 1.00 15.00 C ATOM 684 CD ARG 74 26.448 65.106 24.155 1.00 15.00 C ATOM 685 HE ARG 74 28.037 63.883 24.183 1.00 15.00 H ATOM 686 NE ARG 74 27.226 63.909 24.470 1.00 15.00 N ATOM 687 CG ARG 74 27.240 66.096 23.318 1.00 15.00 C ATOM 688 CZ ARG 74 26.760 62.875 25.163 1.00 15.00 C ATOM 689 HH11 ARG 74 28.348 61.822 25.106 1.00 15.00 H ATOM 690 HH12 ARG 74 27.238 61.162 25.849 1.00 15.00 H ATOM 691 NH1 ARG 74 27.541 61.831 25.401 1.00 15.00 H ATOM 692 HH21 ARG 74 25.008 63.567 25.462 1.00 15.00 H ATOM 693 HH22 ARG 74 25.212 62.221 26.064 1.00 15.00 H ATOM 694 NH2 ARG 74 25.514 62.890 25.617 1.00 15.00 H ATOM 695 N CYS 75 25.762 69.521 20.557 1.00 15.00 N ATOM 696 CA CYS 75 24.824 70.451 19.979 1.00 15.00 C ATOM 697 C CYS 75 23.373 70.159 20.282 1.00 15.00 C ATOM 698 O CYS 75 22.517 71.005 20.030 1.00 15.00 O ATOM 699 H CYS 75 26.078 68.836 20.066 1.00 15.00 H ATOM 700 CB CYS 75 24.990 70.503 18.458 1.00 15.00 C ATOM 701 SG CYS 75 26.581 71.156 17.902 1.00 15.00 S ATOM 702 N ASP 76 23.029 68.951 20.772 1.00 15.00 N ATOM 703 CA ASP 76 21.640 68.577 20.907 1.00 15.00 C ATOM 704 C ASP 76 20.907 69.452 21.883 1.00 15.00 C ATOM 705 O ASP 76 21.497 70.202 22.657 1.00 15.00 O ATOM 706 H ASP 76 23.675 68.374 21.017 1.00 15.00 H ATOM 707 CB ASP 76 21.518 67.116 21.342 1.00 15.00 C ATOM 708 CG ASP 76 20.099 66.591 21.233 1.00 15.00 C ATOM 709 OD1 ASP 76 19.689 66.214 20.115 1.00 15.00 O ATOM 710 OD2 ASP 76 19.398 66.557 22.265 1.00 15.00 O ATOM 711 N ASN 77 19.559 69.377 21.818 1.00 15.00 N ATOM 712 CA ASN 77 18.628 70.139 22.612 1.00 15.00 C ATOM 713 C ASN 77 18.765 69.773 24.068 1.00 15.00 C ATOM 714 O ASN 77 18.704 70.636 24.941 1.00 15.00 O ATOM 715 H ASN 77 19.254 68.786 21.211 1.00 15.00 H ATOM 716 CB ASN 77 17.196 69.917 22.120 1.00 15.00 C ATOM 717 CG ASN 77 16.918 70.616 20.804 1.00 15.00 C ATOM 718 OD1 ASN 77 17.631 71.543 20.420 1.00 15.00 O ATOM 719 HD21 ASN 77 15.667 70.554 19.320 1.00 15.00 H ATOM 720 HD22 ASN 77 15.380 69.492 20.426 1.00 15.00 H ATOM 721 ND2 ASN 77 15.876 70.173 20.109 1.00 15.00 N ATOM 722 N LEU 78 18.946 68.467 24.347 1.00 15.00 N ATOM 723 CA LEU 78 19.041 67.846 25.649 1.00 15.00 C ATOM 724 C LEU 78 20.306 68.226 26.355 1.00 15.00 C ATOM 725 O LEU 78 20.423 68.118 27.573 1.00 15.00 O ATOM 726 H LEU 78 19.010 67.965 23.602 1.00 15.00 H ATOM 727 CB LEU 78 18.957 66.323 25.523 1.00 15.00 C ATOM 728 CG LEU 78 17.618 65.754 25.050 1.00 15.00 C ATOM 729 CD1 LEU 78 17.716 64.252 24.839 1.00 15.00 C ATOM 730 CD2 LEU 78 16.515 66.077 26.047 1.00 15.00 C ATOM 731 N CYS 79 21.278 68.714 25.587 1.00 15.00 N ATOM 732 CA CYS 79 22.632 68.968 25.958 1.00 15.00 C ATOM 733 C CYS 79 22.740 69.753 27.245 1.00 15.00 C ATOM 734 O CYS 79 23.628 69.484 28.053 1.00 15.00 O ATOM 735 H CYS 79 21.001 68.887 24.748 1.00 15.00 H ATOM 736 CB CYS 79 23.361 69.721 24.842 1.00 15.00 C ATOM 737 SG CYS 79 22.624 71.315 24.413 1.00 15.00 S ATOM 738 N LYS 80 21.841 70.716 27.503 1.00 15.00 N ATOM 739 CA LYS 80 21.921 71.516 28.701 1.00 15.00 C ATOM 740 C LYS 80 21.895 70.637 29.920 1.00 15.00 C ATOM 741 O LYS 80 22.647 70.869 30.868 1.00 15.00 O ATOM 742 H LYS 80 21.178 70.858 26.911 1.00 15.00 H ATOM 743 CB LYS 80 20.774 72.528 28.746 1.00 15.00 C ATOM 744 CD LYS 80 19.718 74.608 27.818 1.00 15.00 C ATOM 745 CE LYS 80 19.834 75.723 26.791 1.00 15.00 C ATOM 746 CG LYS 80 20.897 73.652 27.730 1.00 15.00 C ATOM 747 HZ1 LYS 80 18.764 77.281 26.225 1.00 15.00 H ATOM 748 HZ2 LYS 80 18.608 77.012 27.644 1.00 15.00 H ATOM 749 HZ3 LYS 80 17.920 76.185 26.668 1.00 15.00 H ATOM 750 NZ LYS 80 18.664 76.643 26.836 1.00 15.00 N ATOM 751 N SER 81 21.038 69.598 29.939 1.00 15.00 N ATOM 752 CA SER 81 20.942 68.757 31.101 1.00 15.00 C ATOM 753 C SER 81 22.269 68.103 31.312 1.00 15.00 C ATOM 754 O SER 81 22.733 67.953 32.442 1.00 15.00 O ATOM 755 H SER 81 20.525 69.431 29.219 1.00 15.00 H ATOM 756 CB SER 81 19.826 67.725 30.925 1.00 15.00 C ATOM 757 HG SER 81 20.215 67.242 29.166 1.00 15.00 H ATOM 758 OG SER 81 20.128 66.821 29.876 1.00 15.00 O ATOM 759 N TYR 82 22.910 67.706 30.201 1.00 15.00 N ATOM 760 CA TYR 82 24.183 67.049 30.188 1.00 15.00 C ATOM 761 C TYR 82 25.229 68.005 30.673 1.00 15.00 C ATOM 762 O TYR 82 26.177 67.605 31.346 1.00 15.00 O ATOM 763 H TYR 82 22.485 67.878 29.427 1.00 15.00 H ATOM 764 CB TYR 82 24.508 66.537 28.783 1.00 15.00 C ATOM 765 CG TYR 82 23.669 65.356 28.353 1.00 15.00 C ATOM 766 HH TYR 82 21.567 61.444 27.602 1.00 15.00 H ATOM 767 OH TYR 82 21.356 62.113 27.158 1.00 15.00 H ATOM 768 CZ TYR 82 22.121 63.185 27.555 1.00 15.00 C ATOM 769 CD1 TYR 82 22.715 65.486 27.351 1.00 15.00 C ATOM 770 CE1 TYR 82 21.945 64.411 26.952 1.00 15.00 C ATOM 771 CD2 TYR 82 23.833 64.112 28.950 1.00 15.00 C ATOM 772 CE2 TYR 82 23.072 63.025 28.563 1.00 15.00 C ATOM 773 N SER 83 25.075 69.306 30.351 1.00 15.00 N ATOM 774 CA SER 83 26.058 70.301 30.675 1.00 15.00 C ATOM 775 C SER 83 27.228 70.102 29.759 1.00 15.00 C ATOM 776 O SER 83 28.316 70.623 30.000 1.00 15.00 O ATOM 777 H SER 83 24.323 69.542 29.917 1.00 15.00 H ATOM 778 CB SER 83 26.461 70.196 32.146 1.00 15.00 C ATOM 779 HG SER 83 24.772 69.804 32.836 1.00 15.00 H ATOM 780 OG SER 83 25.342 70.385 32.997 1.00 15.00 O ATOM 781 N SER 84 27.005 69.313 28.687 1.00 15.00 N ATOM 782 CA SER 84 27.934 68.996 27.634 1.00 15.00 C ATOM 783 C SER 84 27.958 70.059 26.570 1.00 15.00 C ATOM 784 O SER 84 28.717 69.950 25.609 1.00 15.00 O ATOM 785 H SER 84 26.172 68.972 28.671 1.00 15.00 H ATOM 786 CB SER 84 27.589 67.645 27.004 1.00 15.00 C ATOM 787 HG SER 84 26.176 66.955 26.001 1.00 15.00 H ATOM 788 OG SER 84 26.343 67.698 26.333 1.00 15.00 O ATOM 789 N CYS 85 27.124 71.105 26.684 1.00 15.00 N ATOM 790 CA CYS 85 26.950 72.025 25.589 1.00 15.00 C ATOM 791 C CYS 85 28.198 72.777 25.271 1.00 15.00 C ATOM 792 O CYS 85 28.986 73.104 26.155 1.00 15.00 O ATOM 793 H CYS 85 26.672 71.229 27.452 1.00 15.00 H ATOM 794 CB CYS 85 25.826 73.016 25.897 1.00 15.00 C ATOM 795 SG CYS 85 24.189 72.265 26.052 1.00 15.00 S ATOM 796 N CYS 86 28.392 73.057 23.961 1.00 15.00 N ATOM 797 CA CYS 86 29.460 73.906 23.517 1.00 15.00 C ATOM 798 C CYS 86 29.116 75.267 24.018 1.00 15.00 C ATOM 799 O CYS 86 27.949 75.578 24.245 1.00 15.00 O ATOM 800 H CYS 86 27.828 72.693 23.362 1.00 15.00 H ATOM 801 CB CYS 86 29.596 73.844 21.994 1.00 15.00 C ATOM 802 SG CYS 86 30.073 72.222 21.353 1.00 15.00 S ATOM 803 N HIS 87 30.140 76.119 24.195 1.00 15.00 N ATOM 804 CA HIS 87 29.911 77.452 24.665 1.00 15.00 C ATOM 805 C HIS 87 29.073 78.179 23.659 1.00 15.00 C ATOM 806 O HIS 87 28.150 78.909 24.017 1.00 15.00 O ATOM 807 H HIS 87 30.977 75.843 24.014 1.00 15.00 H ATOM 808 CB HIS 87 31.240 78.171 24.907 1.00 15.00 C ATOM 809 CG HIS 87 32.030 78.416 23.660 1.00 15.00 C ATOM 810 ND1 HIS 87 32.742 77.422 23.022 1.00 15.00 N ATOM 811 CE1 HIS 87 33.344 77.943 21.938 1.00 15.00 C ATOM 812 CD2 HIS 87 32.298 79.566 22.809 1.00 15.00 C ATOM 813 HE2 HIS 87 33.392 79.789 21.129 1.00 15.00 H ATOM 814 NE2 HIS 87 33.082 79.228 21.804 1.00 15.00 N ATOM 815 N ASP 88 29.394 77.976 22.368 1.00 15.00 N ATOM 816 CA ASP 88 28.786 78.608 21.228 1.00 15.00 C ATOM 817 C ASP 88 27.383 78.127 21.008 1.00 15.00 C ATOM 818 O ASP 88 26.636 78.720 20.232 1.00 15.00 O ATOM 819 H ASP 88 30.057 77.380 22.252 1.00 15.00 H ATOM 820 CB ASP 88 29.621 78.358 19.970 1.00 15.00 C ATOM 821 CG ASP 88 30.938 79.108 19.986 1.00 15.00 C ATOM 822 OD1 ASP 88 31.077 80.047 20.798 1.00 15.00 O ATOM 823 OD2 ASP 88 31.831 78.757 19.187 1.00 15.00 O ATOM 824 N PHE 89 26.981 77.041 21.690 1.00 15.00 N ATOM 825 CA PHE 89 25.718 76.389 21.466 1.00 15.00 C ATOM 826 C PHE 89 24.545 77.330 21.516 1.00 15.00 C ATOM 827 O PHE 89 23.737 77.339 20.588 1.00 15.00 O ATOM 828 H PHE 89 27.548 76.723 22.312 1.00 15.00 H ATOM 829 CB PHE 89 25.502 75.274 22.491 1.00 15.00 C ATOM 830 CG PHE 89 24.176 74.581 22.363 1.00 15.00 C ATOM 831 CZ PHE 89 21.718 73.304 22.130 1.00 15.00 C ATOM 832 CD1 PHE 89 23.978 73.605 21.401 1.00 15.00 C ATOM 833 CE1 PHE 89 22.758 72.968 21.284 1.00 15.00 C ATOM 834 CD2 PHE 89 23.124 74.907 23.202 1.00 15.00 C ATOM 835 CE2 PHE 89 21.904 74.269 23.084 1.00 15.00 C ATOM 836 N ASP 90 24.402 78.163 22.560 1.00 15.00 N ATOM 837 CA ASP 90 23.191 78.937 22.644 1.00 15.00 C ATOM 838 C ASP 90 23.029 79.851 21.469 1.00 15.00 C ATOM 839 O ASP 90 21.966 79.883 20.852 1.00 15.00 O ATOM 840 H ASP 90 25.033 78.246 23.196 1.00 15.00 H ATOM 841 CB ASP 90 23.165 79.754 23.937 1.00 15.00 C ATOM 842 CG ASP 90 22.951 78.892 25.166 1.00 15.00 C ATOM 843 OD1 ASP 90 22.558 77.717 25.007 1.00 15.00 O ATOM 844 OD2 ASP 90 23.177 79.391 26.289 1.00 15.00 O ATOM 845 N GLU 91 24.074 80.618 21.114 1.00 15.00 N ATOM 846 CA GLU 91 23.920 81.559 20.042 1.00 15.00 C ATOM 847 C GLU 91 23.725 80.836 18.748 1.00 15.00 C ATOM 848 O GLU 91 22.870 81.204 17.944 1.00 15.00 O ATOM 849 H GLU 91 24.864 80.548 21.540 1.00 15.00 H ATOM 850 CB GLU 91 25.134 82.487 19.964 1.00 15.00 C ATOM 851 CD GLU 91 26.497 84.316 21.050 1.00 15.00 C ATOM 852 CG GLU 91 25.251 83.455 21.130 1.00 15.00 C ATOM 853 OE1 GLU 91 27.363 84.029 20.196 1.00 15.00 O ATOM 854 OE2 GLU 91 26.608 85.276 21.840 1.00 15.00 O ATOM 855 N LEU 92 24.508 79.765 18.531 1.00 15.00 N ATOM 856 CA LEU 92 24.529 79.097 17.264 1.00 15.00 C ATOM 857 C LEU 92 23.220 78.467 16.917 1.00 15.00 C ATOM 858 O LEU 92 22.733 78.651 15.802 1.00 15.00 O ATOM 859 H LEU 92 25.027 79.469 19.204 1.00 15.00 H ATOM 860 CB LEU 92 25.623 78.027 17.240 1.00 15.00 C ATOM 861 CG LEU 92 27.066 78.533 17.235 1.00 15.00 C ATOM 862 CD1 LEU 92 28.041 77.379 17.418 1.00 15.00 C ATOM 863 CD2 LEU 92 27.370 79.282 15.948 1.00 15.00 C ATOM 864 N CYS 93 22.587 77.729 17.849 1.00 15.00 N ATOM 865 CA CYS 93 21.393 77.058 17.427 1.00 15.00 C ATOM 866 C CYS 93 20.372 78.079 17.070 1.00 15.00 C ATOM 867 O CYS 93 19.971 78.915 17.878 1.00 15.00 O ATOM 868 H CYS 93 22.875 77.644 18.698 1.00 15.00 H ATOM 869 CB CYS 93 20.886 76.124 18.527 1.00 15.00 C ATOM 870 SG CYS 93 21.988 74.740 18.899 1.00 15.00 S ATOM 871 N LEU 94 19.942 78.015 15.800 1.00 15.00 N ATOM 872 CA LEU 94 19.004 78.932 15.237 1.00 15.00 C ATOM 873 C LEU 94 17.816 78.141 14.815 1.00 15.00 C ATOM 874 O LEU 94 17.861 76.913 14.775 1.00 15.00 O ATOM 875 H LEU 94 20.278 77.350 15.296 1.00 15.00 H ATOM 876 CB LEU 94 19.634 79.695 14.071 1.00 15.00 C ATOM 877 CG LEU 94 20.884 80.516 14.393 1.00 15.00 C ATOM 878 CD1 LEU 94 21.480 81.109 13.126 1.00 15.00 C ATOM 879 CD2 LEU 94 20.561 81.617 15.392 1.00 15.00 C ATOM 880 N LYS 95 16.701 78.840 14.532 1.00 15.00 N ATOM 881 CA LYS 95 15.515 78.190 14.077 1.00 15.00 C ATOM 882 C LYS 95 15.896 77.496 12.815 1.00 15.00 C ATOM 883 O LYS 95 15.974 78.100 11.747 1.00 15.00 O ATOM 884 H LYS 95 16.712 79.734 14.635 1.00 15.00 H ATOM 885 CB LYS 95 14.387 79.205 13.883 1.00 15.00 C ATOM 886 CD LYS 95 12.412 77.789 14.510 1.00 15.00 C ATOM 887 CE LYS 95 11.076 77.227 14.052 1.00 15.00 C ATOM 888 CG LYS 95 13.079 78.597 13.408 1.00 15.00 C ATOM 889 HZ1 LYS 95 9.632 76.125 14.822 1.00 15.00 H ATOM 890 HZ2 LYS 95 10.264 76.959 15.830 1.00 15.00 H ATOM 891 HZ3 LYS 95 10.932 75.757 15.359 1.00 15.00 H ATOM 892 NZ LYS 95 10.409 76.438 15.124 1.00 15.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.31 64.1 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 59.35 67.9 56 100.0 56 ARMSMC BURIED . . . . . . . . 62.67 54.5 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.24 72.2 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 62.04 71.4 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 53.35 76.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 76.20 63.6 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 60.04 60.9 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 55.35 58.8 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 67.46 50.0 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 14.19 100.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.05 55.6 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 60.34 62.5 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 43.88 57.1 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 94.63 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 20.38 80.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 20.38 80.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 22.61 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 5.52 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.31 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.31 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0578 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.59 29 100.0 29 CRMSCA BURIED . . . . . . . . 1.31 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.45 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.72 142 100.0 142 CRMSMC BURIED . . . . . . . . 1.57 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.55 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 4.29 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.08 103 100.0 103 CRMSSC BURIED . . . . . . . . 2.78 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.53 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.93 219 100.0 219 CRMSALL BURIED . . . . . . . . 2.17 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.237 0.802 0.827 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 12.992 0.779 0.809 29 100.0 29 ERRCA BURIED . . . . . . . . 13.881 0.864 0.875 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.163 0.796 0.821 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 12.954 0.777 0.807 142 100.0 142 ERRMC BURIED . . . . . . . . 13.701 0.845 0.859 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.677 0.677 0.707 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 11.916 0.696 0.725 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 11.225 0.643 0.672 103 100.0 103 ERRSC BURIED . . . . . . . . 12.838 0.764 0.797 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.520 0.745 0.772 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 12.216 0.720 0.749 219 100.0 219 ERRALL BURIED . . . . . . . . 13.315 0.808 0.831 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 15 29 32 38 40 40 40 DISTCA CA (P) 37.50 72.50 80.00 95.00 100.00 40 DISTCA CA (RMS) 0.77 1.02 1.22 1.93 2.31 DISTCA ALL (N) 78 194 227 265 294 303 303 DISTALL ALL (P) 25.74 64.03 74.92 87.46 97.03 303 DISTALL ALL (RMS) 0.73 1.18 1.43 1.97 2.97 DISTALL END of the results output