####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 373), selected 40 , name T0543TS080_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS080_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.38 2.38 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 68 - 94 1.96 2.55 LONGEST_CONTINUOUS_SEGMENT: 27 69 - 95 1.80 2.63 LCS_AVERAGE: 54.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 73 - 94 0.91 2.52 LCS_AVERAGE: 38.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 8 9 40 3 10 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 8 10 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 8 10 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 8 10 40 9 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 8 10 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 8 10 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 8 10 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 8 10 40 2 11 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 6 10 40 1 5 13 28 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 5 10 40 3 3 8 12 18 26 34 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 3 10 40 3 3 4 20 30 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 3 5 40 3 3 4 5 5 12 25 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 3 27 40 2 3 4 5 8 9 30 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 3 27 40 0 3 19 28 31 33 34 35 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 3 27 40 3 4 4 5 16 18 29 34 36 36 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 17 27 40 3 13 22 30 32 33 35 35 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 17 27 40 3 4 22 29 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 22 27 40 5 21 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 22 27 40 3 5 15 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 22 27 40 4 20 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 22 27 40 8 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 22 27 40 5 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 22 27 40 5 21 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 22 27 40 6 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 22 27 40 6 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 22 27 40 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 22 27 40 4 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 3 27 40 3 4 9 20 27 32 35 36 37 39 39 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 64.19 ( 38.19 54.38 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 22 28 30 32 33 35 36 37 39 39 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 27.50 55.00 70.00 75.00 80.00 82.50 87.50 90.00 92.50 97.50 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.66 0.83 0.96 1.15 1.25 1.63 1.91 1.89 2.20 2.20 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 GDT RMS_ALL_AT 2.65 2.53 2.56 2.53 2.50 2.55 2.39 2.42 2.39 2.39 2.39 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 # Checking swapping # possible swapping detected: E 64 E 64 # possible swapping detected: Y 82 Y 82 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 2.636 0 0.213 0.213 2.636 64.881 64.881 LGA S 57 S 57 1.470 0 0.047 0.052 1.825 79.286 77.143 LGA C 58 C 58 0.758 0 0.028 0.066 1.263 88.214 88.968 LGA K 59 K 59 1.211 0 0.543 0.460 4.473 68.452 78.677 LGA G 60 G 60 1.219 0 0.278 0.278 3.308 73.690 73.690 LGA R 61 R 61 1.386 0 0.393 1.729 6.717 72.024 53.723 LGA C 62 C 62 0.922 0 0.511 0.908 2.265 84.048 81.905 LGA F 63 F 63 1.363 0 0.382 1.305 8.063 73.214 45.368 LGA E 64 E 64 2.162 0 0.046 0.541 3.495 61.548 66.085 LGA L 65 L 65 4.945 0 0.668 1.442 7.636 37.262 28.274 LGA Q 66 Q 66 3.391 0 0.183 1.447 4.504 42.143 48.624 LGA E 67 E 67 4.535 0 0.552 1.093 10.187 38.929 21.323 LGA V 68 V 68 5.112 0 0.594 0.646 8.930 39.524 26.327 LGA G 69 G 69 4.681 0 0.187 0.187 4.681 42.262 42.262 LGA P 70 P 70 6.484 0 0.077 0.231 10.038 19.286 12.245 LGA P 71 P 71 3.700 0 0.341 0.630 6.046 53.095 38.980 LGA D 72 D 72 1.748 3 0.578 0.585 3.206 66.905 39.702 LGA C 73 C 73 1.129 0 0.289 0.387 2.089 77.262 77.222 LGA R 74 R 74 1.156 0 0.095 1.122 5.535 81.429 64.545 LGA C 75 C 75 1.120 0 0.158 0.150 2.013 81.429 78.651 LGA D 76 D 76 1.368 0 0.041 1.088 4.866 79.286 65.179 LGA N 77 N 77 2.644 0 0.075 0.378 5.257 66.905 49.345 LGA L 78 L 78 1.044 0 0.175 1.247 4.634 83.690 67.440 LGA C 79 C 79 0.844 0 0.049 0.058 1.322 90.476 87.460 LGA K 80 K 80 1.135 0 0.027 1.018 5.517 85.952 69.048 LGA S 81 S 81 0.819 0 0.053 0.676 2.888 90.476 84.921 LGA Y 82 Y 82 1.480 0 0.163 1.488 7.073 77.143 55.833 LGA S 83 S 83 1.534 0 0.214 0.204 1.993 75.000 74.286 LGA S 84 S 84 1.614 0 0.055 0.060 2.080 79.405 74.524 LGA C 85 C 85 0.470 0 0.048 0.129 1.007 100.000 95.317 LGA C 86 C 86 0.579 0 0.043 0.088 0.932 95.238 93.651 LGA H 87 H 87 0.288 0 0.120 1.153 6.875 100.000 65.857 LGA D 88 D 88 0.978 0 0.186 1.171 4.121 90.476 76.250 LGA F 89 F 89 1.178 0 0.077 0.609 2.322 81.429 77.619 LGA D 90 D 90 1.244 0 0.028 0.765 2.062 81.429 80.476 LGA E 91 E 91 1.062 0 0.113 0.465 3.037 81.429 76.032 LGA L 92 L 92 0.725 0 0.167 0.275 1.497 90.476 88.214 LGA C 93 C 93 1.083 0 0.535 0.481 3.285 73.690 77.778 LGA L 94 L 94 2.279 0 0.451 1.287 8.332 75.238 47.679 LGA K 95 K 95 3.699 0 0.352 0.955 11.370 54.167 28.995 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.382 2.304 3.411 72.420 63.612 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 36 1.91 80.000 76.850 1.791 LGA_LOCAL RMSD: 1.910 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.425 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.382 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.935073 * X + 0.121340 * Y + 0.333039 * Z + 9.855815 Y_new = -0.318269 * X + -0.126162 * Y + 0.939568 * Z + 82.723175 Z_new = 0.156024 * X + -0.984561 * Y + -0.079352 * Z + 29.841339 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.328068 -0.156664 -1.651219 [DEG: -18.7969 -8.9762 -94.6079 ] ZXZ: 2.800950 1.650232 2.984429 [DEG: 160.4826 94.5513 170.9952 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS080_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS080_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 36 1.91 76.850 2.38 REMARK ---------------------------------------------------------- MOLECULE T0543TS080_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 520 N GLY 56 33.854 70.638 17.576 1.00 50.00 N ATOM 521 CA GLY 56 32.814 70.951 18.504 1.00 50.00 C ATOM 522 C GLY 56 32.318 72.335 18.212 1.00 50.00 C ATOM 523 O GLY 56 32.376 73.213 19.072 1.00 50.00 O ATOM 524 H GLY 56 33.667 70.166 16.832 1.00 50.00 H ATOM 525 N SER 57 31.872 72.576 16.958 1.00 50.00 N ATOM 526 CA SER 57 31.318 73.858 16.620 1.00 50.00 C ATOM 527 C SER 57 29.904 73.659 16.164 1.00 50.00 C ATOM 528 O SER 57 29.607 72.781 15.357 1.00 50.00 O ATOM 529 H SER 57 31.924 71.930 16.334 1.00 50.00 H ATOM 530 CB SER 57 32.163 74.540 15.542 1.00 50.00 C ATOM 531 HG SER 57 31.524 76.274 15.792 1.00 50.00 H ATOM 532 OG SER 57 31.580 75.767 15.138 1.00 50.00 O ATOM 533 N CYS 58 28.993 74.455 16.754 1.00 50.00 N ATOM 534 CA CYS 58 27.584 74.523 16.476 1.00 50.00 C ATOM 535 C CYS 58 27.236 75.411 15.328 1.00 50.00 C ATOM 536 O CYS 58 26.050 75.626 15.077 1.00 50.00 O ATOM 537 H CYS 58 29.353 74.985 17.385 1.00 50.00 H ATOM 538 CB CYS 58 26.817 75.000 17.710 1.00 50.00 C ATOM 539 SG CYS 58 26.888 73.867 19.118 1.00 50.00 S ATOM 540 N LYS 59 28.229 76.033 14.666 1.00 50.00 N ATOM 541 CA LYS 59 27.919 77.010 13.662 1.00 50.00 C ATOM 542 C LYS 59 26.977 76.440 12.648 1.00 50.00 C ATOM 543 O LYS 59 25.866 76.939 12.483 1.00 50.00 O ATOM 544 H LYS 59 29.087 75.836 14.851 1.00 50.00 H ATOM 545 CB LYS 59 29.198 77.507 12.983 1.00 50.00 C ATOM 546 CD LYS 59 30.278 79.058 11.333 1.00 50.00 C ATOM 547 CE LYS 59 30.044 80.100 10.252 1.00 50.00 C ATOM 548 CG LYS 59 28.965 78.572 11.924 1.00 50.00 C ATOM 549 HZ1 LYS 59 31.148 81.192 9.035 1.00 50.00 H ATOM 550 HZ2 LYS 59 31.761 79.901 9.299 1.00 50.00 H ATOM 551 HZ3 LYS 59 31.822 80.954 10.300 1.00 50.00 H ATOM 552 NZ LYS 59 31.323 80.585 9.662 1.00 50.00 N ATOM 553 N GLY 60 27.381 75.377 11.939 1.00 50.00 N ATOM 554 CA GLY 60 26.479 74.814 10.980 1.00 50.00 C ATOM 555 C GLY 60 25.378 74.012 11.619 1.00 50.00 C ATOM 556 O GLY 60 24.210 74.151 11.256 1.00 50.00 O ATOM 557 H GLY 60 28.197 75.017 12.055 1.00 50.00 H ATOM 558 N ARG 61 25.736 73.148 12.596 1.00 50.00 N ATOM 559 CA ARG 61 24.837 72.125 13.076 1.00 50.00 C ATOM 560 C ARG 61 23.571 72.631 13.693 1.00 50.00 C ATOM 561 O ARG 61 22.495 72.541 13.106 1.00 50.00 O ATOM 562 H ARG 61 26.561 73.224 12.948 1.00 50.00 H ATOM 563 CB ARG 61 25.538 71.235 14.105 1.00 50.00 C ATOM 564 CD ARG 61 27.493 70.602 12.664 1.00 50.00 C ATOM 565 HE ARG 61 28.278 68.756 12.642 1.00 50.00 H ATOM 566 NE ARG 61 28.410 69.528 12.286 1.00 50.00 N ATOM 567 CG ARG 61 26.330 70.089 13.497 1.00 50.00 C ATOM 568 CZ ARG 61 29.422 69.676 11.437 1.00 50.00 C ATOM 569 HH11 ARG 61 30.057 67.878 11.518 1.00 50.00 H ATOM 570 HH12 ARG 61 30.859 68.739 10.603 1.00 50.00 H ATOM 571 NH1 ARG 61 30.205 68.643 11.153 1.00 50.00 N ATOM 572 HH21 ARG 61 29.142 71.524 11.058 1.00 50.00 H ATOM 573 HH22 ARG 61 30.304 70.949 10.325 1.00 50.00 H ATOM 574 NH2 ARG 61 29.649 70.854 10.874 1.00 50.00 N ATOM 575 N CYS 62 23.675 73.207 14.903 1.00 50.00 N ATOM 576 CA CYS 62 22.531 73.690 15.617 1.00 50.00 C ATOM 577 C CYS 62 21.589 72.539 15.842 1.00 50.00 C ATOM 578 O CYS 62 20.409 72.733 16.132 1.00 50.00 O ATOM 579 H CYS 62 24.496 73.285 15.263 1.00 50.00 H ATOM 580 CB CYS 62 21.856 74.825 14.844 1.00 50.00 C ATOM 581 SG CYS 62 20.849 75.927 15.863 1.00 50.00 S ATOM 582 N PHE 63 22.087 71.296 15.689 1.00 50.00 N ATOM 583 CA PHE 63 21.279 70.136 15.928 1.00 50.00 C ATOM 584 C PHE 63 22.216 68.985 15.756 1.00 50.00 C ATOM 585 O PHE 63 22.385 68.483 14.646 1.00 50.00 O ATOM 586 H PHE 63 22.944 71.203 15.431 1.00 50.00 H ATOM 587 CB PHE 63 20.090 70.104 14.967 1.00 50.00 C ATOM 588 CG PHE 63 19.145 68.962 15.209 1.00 50.00 C ATOM 589 CZ PHE 63 17.399 66.845 15.652 1.00 50.00 C ATOM 590 CD1 PHE 63 18.214 69.019 16.231 1.00 50.00 C ATOM 591 CE1 PHE 63 17.345 67.969 16.454 1.00 50.00 C ATOM 592 CD2 PHE 63 19.186 67.831 14.413 1.00 50.00 C ATOM 593 CE2 PHE 63 18.317 66.779 14.637 1.00 50.00 C ATOM 594 N GLU 64 22.841 68.511 16.852 1.00 50.00 N ATOM 595 CA GLU 64 23.807 67.464 16.672 1.00 50.00 C ATOM 596 C GLU 64 24.045 66.774 17.977 1.00 50.00 C ATOM 597 O GLU 64 24.188 67.413 19.019 1.00 50.00 O ATOM 598 H GLU 64 22.671 68.829 17.677 1.00 50.00 H ATOM 599 CB GLU 64 25.111 68.029 16.106 1.00 50.00 C ATOM 600 CD GLU 64 27.412 67.564 15.173 1.00 50.00 C ATOM 601 CG GLU 64 26.163 66.975 15.799 1.00 50.00 C ATOM 602 OE1 GLU 64 28.315 67.978 15.929 1.00 50.00 O ATOM 603 OE2 GLU 64 27.486 67.612 13.927 1.00 50.00 O ATOM 604 N LEU 65 24.098 65.430 17.913 1.00 50.00 N ATOM 605 CA LEU 65 24.415 64.538 18.991 1.00 50.00 C ATOM 606 C LEU 65 25.357 63.564 18.366 1.00 50.00 C ATOM 607 O LEU 65 25.790 63.748 17.231 1.00 50.00 O ATOM 608 H LEU 65 23.909 65.100 17.097 1.00 50.00 H ATOM 609 CB LEU 65 23.143 63.904 19.555 1.00 50.00 C ATOM 610 CG LEU 65 22.441 62.882 18.659 1.00 50.00 C ATOM 611 CD1 LEU 65 21.429 62.073 19.457 1.00 50.00 C ATOM 612 CD2 LEU 65 21.759 63.572 17.486 1.00 50.00 C ATOM 613 N GLN 66 25.733 62.520 19.126 1.00 50.00 N ATOM 614 CA GLN 66 26.501 61.422 18.612 1.00 50.00 C ATOM 615 C GLN 66 26.037 60.224 19.364 1.00 50.00 C ATOM 616 O GLN 66 25.084 60.312 20.137 1.00 50.00 O ATOM 617 H GLN 66 25.482 62.529 19.990 1.00 50.00 H ATOM 618 CB GLN 66 27.998 61.691 18.779 1.00 50.00 C ATOM 619 CD GLN 66 28.511 62.694 16.519 1.00 50.00 C ATOM 620 CG GLN 66 28.499 62.909 18.020 1.00 50.00 C ATOM 621 OE1 GLN 66 28.655 61.567 16.044 1.00 50.00 O ATOM 622 HE21 GLN 66 28.358 63.706 14.869 1.00 50.00 H ATOM 623 HE22 GLN 66 28.256 64.584 16.154 1.00 50.00 H ATOM 624 NE2 GLN 66 28.358 63.777 15.766 1.00 50.00 N ATOM 625 N GLU 67 26.663 59.052 19.123 1.00 50.00 N ATOM 626 CA GLU 67 26.250 57.929 19.910 1.00 50.00 C ATOM 627 C GLU 67 26.537 58.319 21.316 1.00 50.00 C ATOM 628 O GLU 67 25.659 58.300 22.177 1.00 50.00 O ATOM 629 H GLU 67 27.309 58.955 18.504 1.00 50.00 H ATOM 630 CB GLU 67 26.992 56.664 19.470 1.00 50.00 C ATOM 631 CD GLU 67 27.320 54.176 19.747 1.00 50.00 C ATOM 632 CG GLU 67 26.588 55.413 20.232 1.00 50.00 C ATOM 633 OE1 GLU 67 28.159 54.302 18.831 1.00 50.00 O ATOM 634 OE2 GLU 67 27.054 53.080 20.284 1.00 50.00 O ATOM 635 N VAL 68 27.797 58.708 21.567 1.00 50.00 N ATOM 636 CA VAL 68 28.141 59.236 22.847 1.00 50.00 C ATOM 637 C VAL 68 27.569 60.615 22.904 1.00 50.00 C ATOM 638 O VAL 68 27.130 61.083 23.954 1.00 50.00 O ATOM 639 H VAL 68 28.426 58.636 20.927 1.00 50.00 H ATOM 640 CB VAL 68 29.665 59.226 23.072 1.00 50.00 C ATOM 641 CG1 VAL 68 30.019 59.956 24.358 1.00 50.00 C ATOM 642 CG2 VAL 68 30.188 57.798 23.104 1.00 50.00 C ATOM 643 N GLY 69 27.513 61.265 21.723 1.00 50.00 N ATOM 644 CA GLY 69 27.153 62.643 21.567 1.00 50.00 C ATOM 645 C GLY 69 28.437 63.258 21.142 1.00 50.00 C ATOM 646 O GLY 69 29.446 62.555 21.171 1.00 50.00 O ATOM 647 H GLY 69 27.723 60.769 21.001 1.00 50.00 H ATOM 648 N PRO 70 28.515 64.484 20.717 1.00 50.00 N ATOM 649 CA PRO 70 29.830 64.904 20.352 1.00 50.00 C ATOM 650 C PRO 70 30.607 64.991 21.620 1.00 50.00 C ATOM 651 O PRO 70 30.061 65.424 22.633 1.00 50.00 O ATOM 652 CB PRO 70 29.612 66.259 19.675 1.00 50.00 C ATOM 653 CD PRO 70 27.447 65.455 20.306 1.00 50.00 C ATOM 654 CG PRO 70 28.180 66.239 19.254 1.00 50.00 C ATOM 655 N PRO 71 31.819 64.526 21.598 1.00 50.00 N ATOM 656 CA PRO 71 32.588 64.513 22.803 1.00 50.00 C ATOM 657 C PRO 71 32.887 65.867 23.340 1.00 50.00 C ATOM 658 O PRO 71 32.748 66.070 24.545 1.00 50.00 O ATOM 659 CB PRO 71 33.882 63.799 22.409 1.00 50.00 C ATOM 660 CD PRO 71 32.478 63.681 20.475 1.00 50.00 C ATOM 661 CG PRO 71 33.490 62.912 21.276 1.00 50.00 C ATOM 662 N ASP 72 33.294 66.810 22.470 1.00 50.00 N ATOM 663 CA ASP 72 33.629 68.112 22.956 1.00 50.00 C ATOM 664 C ASP 72 32.390 68.767 23.459 1.00 50.00 C ATOM 665 O ASP 72 32.345 69.261 24.586 1.00 50.00 O ATOM 666 H ASP 72 33.356 66.627 21.591 1.00 50.00 H ATOM 667 CB ASP 72 34.290 68.942 21.854 1.00 50.00 C ATOM 668 CG ASP 72 35.691 68.463 21.525 1.00 50.00 C ATOM 669 OD1 ASP 72 36.254 67.681 22.320 1.00 50.00 O ATOM 670 OD2 ASP 72 36.227 68.871 20.473 1.00 50.00 O ATOM 671 N CYS 73 31.329 68.761 22.630 1.00 50.00 N ATOM 672 CA CYS 73 30.116 69.401 23.034 1.00 50.00 C ATOM 673 C CYS 73 28.987 68.759 22.304 1.00 50.00 C ATOM 674 O CYS 73 29.101 67.629 21.837 1.00 50.00 O ATOM 675 H CYS 73 31.380 68.358 21.827 1.00 50.00 H ATOM 676 CB CYS 73 30.187 70.905 22.757 1.00 50.00 C ATOM 677 SG CYS 73 30.320 71.336 21.007 1.00 50.00 S ATOM 678 N ARG 74 27.836 69.455 22.221 1.00 50.00 N ATOM 679 CA ARG 74 26.700 68.875 21.571 1.00 50.00 C ATOM 680 C ARG 74 25.844 70.008 21.083 1.00 50.00 C ATOM 681 O ARG 74 25.567 70.948 21.826 1.00 50.00 O ATOM 682 H ARG 74 27.780 70.282 22.573 1.00 50.00 H ATOM 683 CB ARG 74 25.947 67.951 22.531 1.00 50.00 C ATOM 684 CD ARG 74 24.115 66.273 22.886 1.00 50.00 C ATOM 685 HE ARG 74 22.810 65.723 21.466 1.00 50.00 H ATOM 686 NE ARG 74 22.966 65.586 22.302 1.00 50.00 N ATOM 687 CG ARG 74 24.781 67.212 21.894 1.00 50.00 C ATOM 688 CZ ARG 74 22.160 64.772 22.976 1.00 50.00 C ATOM 689 HH11 ARG 74 20.999 64.340 21.526 1.00 50.00 H ATOM 690 HH12 ARG 74 20.618 63.664 22.798 1.00 50.00 H ATOM 691 NH1 ARG 74 21.139 64.191 22.361 1.00 50.00 N ATOM 692 HH21 ARG 74 23.039 64.919 24.662 1.00 50.00 H ATOM 693 HH22 ARG 74 21.856 64.015 24.700 1.00 50.00 H ATOM 694 NH2 ARG 74 22.377 64.542 24.263 1.00 50.00 N ATOM 695 N CYS 75 25.439 69.964 19.801 1.00 50.00 N ATOM 696 CA CYS 75 24.571 70.937 19.195 1.00 50.00 C ATOM 697 C CYS 75 23.132 70.719 19.563 1.00 50.00 C ATOM 698 O CYS 75 22.291 71.572 19.288 1.00 50.00 O ATOM 699 H CYS 75 25.746 69.271 19.315 1.00 50.00 H ATOM 700 CB CYS 75 24.719 70.914 17.673 1.00 50.00 C ATOM 701 SG CYS 75 26.349 71.417 17.073 1.00 50.00 S ATOM 702 N ASP 76 22.782 69.545 20.122 1.00 50.00 N ATOM 703 CA ASP 76 21.396 69.258 20.387 1.00 50.00 C ATOM 704 C ASP 76 20.881 70.073 21.537 1.00 50.00 C ATOM 705 O ASP 76 21.643 70.676 22.283 1.00 50.00 O ATOM 706 H ASP 76 23.415 68.939 20.331 1.00 50.00 H ATOM 707 CB ASP 76 21.202 67.767 20.674 1.00 50.00 C ATOM 708 CG ASP 76 21.382 66.908 19.439 1.00 50.00 C ATOM 709 OD1 ASP 76 21.415 67.470 18.324 1.00 50.00 O ATOM 710 OD2 ASP 76 21.490 65.672 19.586 1.00 50.00 O ATOM 711 N ASN 77 19.539 70.143 21.651 1.00 50.00 N ATOM 712 CA ASN 77 18.778 70.802 22.680 1.00 50.00 C ATOM 713 C ASN 77 18.881 70.019 23.959 1.00 50.00 C ATOM 714 O ASN 77 18.769 70.578 25.048 1.00 50.00 O ATOM 715 H ASN 77 19.115 69.715 20.983 1.00 50.00 H ATOM 716 CB ASN 77 17.321 70.974 22.244 1.00 50.00 C ATOM 717 CG ASN 77 17.153 72.048 21.188 1.00 50.00 C ATOM 718 OD1 ASN 77 17.996 72.935 21.051 1.00 50.00 O ATOM 719 HD21 ASN 77 15.913 72.584 19.793 1.00 50.00 H ATOM 720 HD22 ASN 77 15.470 71.305 20.568 1.00 50.00 H ATOM 721 ND2 ASN 77 16.061 71.971 20.436 1.00 50.00 N ATOM 722 N LEU 78 19.075 68.690 23.834 1.00 50.00 N ATOM 723 CA LEU 78 19.125 67.702 24.885 1.00 50.00 C ATOM 724 C LEU 78 20.290 68.006 25.769 1.00 50.00 C ATOM 725 O LEU 78 20.344 67.664 26.948 1.00 50.00 O ATOM 726 H LEU 78 19.180 68.440 22.976 1.00 50.00 H ATOM 727 CB LEU 78 19.225 66.295 24.293 1.00 50.00 C ATOM 728 CG LEU 78 17.996 65.789 23.535 1.00 50.00 C ATOM 729 CD1 LEU 78 18.286 64.451 22.872 1.00 50.00 C ATOM 730 CD2 LEU 78 16.801 65.669 24.469 1.00 50.00 C ATOM 731 N CYS 79 21.245 68.703 25.170 1.00 50.00 N ATOM 732 CA CYS 79 22.504 69.128 25.665 1.00 50.00 C ATOM 733 C CYS 79 22.275 69.886 26.936 1.00 50.00 C ATOM 734 O CYS 79 23.120 69.875 27.825 1.00 50.00 O ATOM 735 H CYS 79 21.000 68.907 24.329 1.00 50.00 H ATOM 736 CB CYS 79 23.229 69.981 24.622 1.00 50.00 C ATOM 737 SG CYS 79 22.366 71.504 24.171 1.00 50.00 S ATOM 738 N LYS 80 21.136 70.576 27.079 1.00 50.00 N ATOM 739 CA LYS 80 20.936 71.298 28.303 1.00 50.00 C ATOM 740 C LYS 80 20.949 70.346 29.467 1.00 50.00 C ATOM 741 O LYS 80 21.524 70.655 30.509 1.00 50.00 O ATOM 742 H LYS 80 20.506 70.596 26.436 1.00 50.00 H ATOM 743 CB LYS 80 19.620 72.077 28.256 1.00 50.00 C ATOM 744 CD LYS 80 18.294 73.979 27.295 1.00 50.00 C ATOM 745 CE LYS 80 18.306 75.158 26.336 1.00 50.00 C ATOM 746 CG LYS 80 19.636 73.264 27.307 1.00 50.00 C ATOM 747 HZ1 LYS 80 17.026 76.525 25.713 1.00 50.00 H ATOM 748 HZ2 LYS 80 16.773 76.145 27.092 1.00 50.00 H ATOM 749 HZ3 LYS 80 16.362 75.268 26.009 1.00 50.00 H ATOM 750 NZ LYS 80 16.984 75.843 26.281 1.00 50.00 N ATOM 751 N SER 81 20.313 69.163 29.341 1.00 50.00 N ATOM 752 CA SER 81 20.280 68.250 30.453 1.00 50.00 C ATOM 753 C SER 81 21.662 67.743 30.746 1.00 50.00 C ATOM 754 O SER 81 22.122 67.783 31.886 1.00 50.00 O ATOM 755 H SER 81 19.911 68.944 28.567 1.00 50.00 H ATOM 756 CB SER 81 19.330 67.088 30.162 1.00 50.00 C ATOM 757 HG SER 81 19.038 66.563 31.929 1.00 50.00 H ATOM 758 OG SER 81 19.298 66.173 31.244 1.00 50.00 O ATOM 759 N TYR 82 22.356 67.260 29.698 1.00 50.00 N ATOM 760 CA TYR 82 23.653 66.642 29.754 1.00 50.00 C ATOM 761 C TYR 82 24.727 67.610 30.153 1.00 50.00 C ATOM 762 O TYR 82 25.638 67.237 30.890 1.00 50.00 O ATOM 763 H TYR 82 21.935 67.352 28.908 1.00 50.00 H ATOM 764 CB TYR 82 24.008 66.017 28.403 1.00 50.00 C ATOM 765 CG TYR 82 25.343 65.307 28.389 1.00 50.00 C ATOM 766 HH TYR 82 28.881 62.524 28.449 1.00 50.00 H ATOM 767 OH TYR 82 29.005 63.338 28.352 1.00 50.00 O ATOM 768 CZ TYR 82 27.794 63.991 28.363 1.00 50.00 C ATOM 769 CD1 TYR 82 25.416 63.926 28.534 1.00 50.00 C ATOM 770 CE1 TYR 82 26.631 63.269 28.522 1.00 50.00 C ATOM 771 CD2 TYR 82 26.525 66.017 28.231 1.00 50.00 C ATOM 772 CE2 TYR 82 27.749 65.377 28.216 1.00 50.00 C ATOM 773 N SER 83 24.611 68.877 29.705 1.00 50.00 N ATOM 774 CA SER 83 25.551 69.965 29.840 1.00 50.00 C ATOM 775 C SER 83 26.743 69.762 28.951 1.00 50.00 C ATOM 776 O SER 83 27.845 70.220 29.247 1.00 50.00 O ATOM 777 H SER 83 23.831 69.007 29.276 1.00 50.00 H ATOM 778 CB SER 83 25.998 70.109 31.296 1.00 50.00 C ATOM 779 HG SER 83 24.346 69.780 32.094 1.00 50.00 H ATOM 780 OG SER 83 24.899 70.396 32.142 1.00 50.00 O ATOM 781 N SER 84 26.530 69.047 27.831 1.00 50.00 N ATOM 782 CA SER 84 27.489 68.799 26.792 1.00 50.00 C ATOM 783 C SER 84 27.501 69.984 25.868 1.00 50.00 C ATOM 784 O SER 84 28.082 69.929 24.788 1.00 50.00 O ATOM 785 H SER 84 25.698 68.710 27.766 1.00 50.00 H ATOM 786 CB SER 84 27.148 67.507 26.046 1.00 50.00 C ATOM 787 HG SER 84 25.971 68.247 24.802 1.00 50.00 H ATOM 788 OG SER 84 25.918 67.627 25.353 1.00 50.00 O ATOM 789 N CYS 85 26.850 71.092 26.261 1.00 50.00 N ATOM 790 CA CYS 85 26.650 72.175 25.331 1.00 50.00 C ATOM 791 C CYS 85 27.938 72.814 24.963 1.00 50.00 C ATOM 792 O CYS 85 28.881 72.861 25.750 1.00 50.00 O ATOM 793 H CYS 85 26.540 71.159 27.102 1.00 50.00 H ATOM 794 CB CYS 85 25.698 73.218 25.920 1.00 50.00 C ATOM 795 SG CYS 85 24.017 72.617 26.208 1.00 50.00 S ATOM 796 N CYS 86 27.991 73.299 23.707 1.00 50.00 N ATOM 797 CA CYS 86 29.141 73.957 23.173 1.00 50.00 C ATOM 798 C CYS 86 29.124 75.355 23.712 1.00 50.00 C ATOM 799 O CYS 86 28.073 75.864 24.101 1.00 50.00 O ATOM 800 H CYS 86 27.257 73.193 23.198 1.00 50.00 H ATOM 801 CB CYS 86 29.119 73.920 21.644 1.00 50.00 C ATOM 802 SG CYS 86 29.245 72.262 20.935 1.00 50.00 S ATOM 803 N HIS 87 30.301 76.011 23.777 1.00 50.00 N ATOM 804 CA HIS 87 30.335 77.370 24.241 1.00 50.00 C ATOM 805 C HIS 87 29.591 78.193 23.239 1.00 50.00 C ATOM 806 O HIS 87 28.728 79.001 23.583 1.00 50.00 O ATOM 807 H HIS 87 31.063 75.600 23.531 1.00 50.00 H ATOM 808 CB HIS 87 31.781 77.840 24.418 1.00 50.00 C ATOM 809 CG HIS 87 31.902 79.238 24.937 1.00 50.00 C ATOM 810 ND1 HIS 87 31.594 79.579 26.236 1.00 50.00 N ATOM 811 CE1 HIS 87 31.801 80.898 26.403 1.00 50.00 C ATOM 812 CD2 HIS 87 32.311 80.520 24.382 1.00 50.00 C ATOM 813 HE2 HIS 87 32.439 82.368 25.180 1.00 50.00 H ATOM 814 NE2 HIS 87 32.232 81.469 25.295 1.00 50.00 N ATOM 815 N ASP 88 29.941 77.973 21.956 1.00 50.00 N ATOM 816 CA ASP 88 29.421 78.634 20.792 1.00 50.00 C ATOM 817 C ASP 88 28.026 78.166 20.518 1.00 50.00 C ATOM 818 O ASP 88 27.288 78.802 19.769 1.00 50.00 O ATOM 819 H ASP 88 30.571 77.337 21.868 1.00 50.00 H ATOM 820 CB ASP 88 30.323 78.379 19.582 1.00 50.00 C ATOM 821 CG ASP 88 31.652 79.100 19.685 1.00 50.00 C ATOM 822 OD1 ASP 88 31.770 80.011 20.532 1.00 50.00 O ATOM 823 OD2 ASP 88 32.577 78.755 18.920 1.00 50.00 O ATOM 824 N PHE 89 27.632 77.025 21.115 1.00 50.00 N ATOM 825 CA PHE 89 26.360 76.405 20.860 1.00 50.00 C ATOM 826 C PHE 89 25.247 77.377 21.060 1.00 50.00 C ATOM 827 O PHE 89 24.378 77.496 20.198 1.00 50.00 O ATOM 828 H PHE 89 28.207 76.650 21.698 1.00 50.00 H ATOM 829 CB PHE 89 26.166 75.187 21.766 1.00 50.00 C ATOM 830 CG PHE 89 24.833 74.516 21.602 1.00 50.00 C ATOM 831 CZ PHE 89 22.366 73.271 21.305 1.00 50.00 C ATOM 832 CD1 PHE 89 24.105 74.665 20.435 1.00 50.00 C ATOM 833 CE1 PHE 89 22.877 74.048 20.283 1.00 50.00 C ATOM 834 CD2 PHE 89 24.306 73.735 22.615 1.00 50.00 C ATOM 835 CE2 PHE 89 23.079 73.117 22.465 1.00 50.00 C ATOM 836 N ASP 90 25.229 78.093 22.194 1.00 50.00 N ATOM 837 CA ASP 90 24.162 79.012 22.455 1.00 50.00 C ATOM 838 C ASP 90 24.212 80.133 21.464 1.00 50.00 C ATOM 839 O ASP 90 23.182 80.543 20.928 1.00 50.00 O ATOM 840 H ASP 90 25.894 77.992 22.793 1.00 50.00 H ATOM 841 CB ASP 90 24.252 79.545 23.886 1.00 50.00 C ATOM 842 CG ASP 90 23.896 78.498 24.922 1.00 50.00 C ATOM 843 OD1 ASP 90 23.323 77.455 24.540 1.00 50.00 O ATOM 844 OD2 ASP 90 24.191 78.717 26.116 1.00 50.00 O ATOM 845 N GLU 91 25.424 80.639 21.179 1.00 50.00 N ATOM 846 CA GLU 91 25.560 81.786 20.333 1.00 50.00 C ATOM 847 C GLU 91 25.002 81.455 18.994 1.00 50.00 C ATOM 848 O GLU 91 24.248 82.225 18.406 1.00 50.00 O ATOM 849 H GLU 91 26.155 80.247 21.526 1.00 50.00 H ATOM 850 CB GLU 91 27.026 82.212 20.240 1.00 50.00 C ATOM 851 CD GLU 91 28.719 83.859 19.344 1.00 50.00 C ATOM 852 CG GLU 91 27.260 83.449 19.387 1.00 50.00 C ATOM 853 OE1 GLU 91 29.551 83.162 19.961 1.00 50.00 O ATOM 854 OE2 GLU 91 29.030 84.878 18.691 1.00 50.00 O ATOM 855 N LEU 92 25.391 80.287 18.472 1.00 50.00 N ATOM 856 CA LEU 92 24.975 79.821 17.191 1.00 50.00 C ATOM 857 C LEU 92 23.516 79.485 17.250 1.00 50.00 C ATOM 858 O LEU 92 22.750 79.837 16.354 1.00 50.00 O ATOM 859 H LEU 92 25.944 79.786 18.975 1.00 50.00 H ATOM 860 CB LEU 92 25.807 78.611 16.764 1.00 50.00 C ATOM 861 CG LEU 92 27.282 78.877 16.455 1.00 50.00 C ATOM 862 CD1 LEU 92 28.026 77.571 16.217 1.00 50.00 C ATOM 863 CD2 LEU 92 27.421 79.792 15.249 1.00 50.00 C ATOM 864 N CYS 93 23.091 78.800 18.331 1.00 50.00 N ATOM 865 CA CYS 93 21.714 78.417 18.461 1.00 50.00 C ATOM 866 C CYS 93 21.176 79.123 19.651 1.00 50.00 C ATOM 867 O CYS 93 21.027 78.519 20.713 1.00 50.00 O ATOM 868 H CYS 93 23.682 78.582 18.975 1.00 50.00 H ATOM 869 CB CYS 93 21.590 76.897 18.584 1.00 50.00 C ATOM 870 SG CYS 93 22.194 75.978 17.148 1.00 50.00 S ATOM 871 N LEU 94 20.865 80.421 19.495 1.00 50.00 N ATOM 872 CA LEU 94 20.369 81.176 20.601 1.00 50.00 C ATOM 873 C LEU 94 19.031 80.627 20.984 1.00 50.00 C ATOM 874 O LEU 94 18.792 80.307 22.149 1.00 50.00 O ATOM 875 H LEU 94 20.970 80.814 18.693 1.00 50.00 H ATOM 876 CB LEU 94 20.285 82.661 20.241 1.00 50.00 C ATOM 877 CG LEU 94 19.753 83.594 21.332 1.00 50.00 C ATOM 878 CD1 LEU 94 20.642 83.539 22.566 1.00 50.00 C ATOM 879 CD2 LEU 94 19.652 85.021 20.816 1.00 50.00 C ATOM 880 N LYS 95 18.119 80.487 19.997 1.00 50.00 N ATOM 881 CA LYS 95 16.807 80.008 20.323 1.00 50.00 C ATOM 882 C LYS 95 16.398 79.012 19.292 1.00 50.00 C ATOM 883 O LYS 95 15.399 79.196 18.599 1.00 50.00 O ATOM 884 H LYS 95 18.325 80.689 19.145 1.00 50.00 H ATOM 885 CB LYS 95 15.816 81.171 20.404 1.00 50.00 C ATOM 886 CD LYS 95 15.072 83.270 21.562 1.00 50.00 C ATOM 887 CE LYS 95 15.376 84.267 22.669 1.00 50.00 C ATOM 888 CG LYS 95 16.126 82.175 21.502 1.00 50.00 C ATOM 889 HZ1 LYS 95 14.572 85.923 23.380 1.00 50.00 H ATOM 890 HZ2 LYS 95 13.559 85.011 22.876 1.00 50.00 H ATOM 891 HZ3 LYS 95 14.357 85.797 21.949 1.00 50.00 H ATOM 892 NZ LYS 95 14.365 85.359 22.724 1.00 50.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 62.80 50.0 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 66.27 44.6 56 100.0 56 ARMSMC BURIED . . . . . . . . 52.95 63.6 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.65 58.3 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 73.63 57.1 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 72.10 56.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 73.89 63.6 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.41 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 70.78 29.4 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 90.99 22.2 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 46.93 60.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.24 33.3 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 73.92 37.5 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 64.30 42.9 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 104.90 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 26.06 60.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 26.06 60.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 28.85 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 8.13 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.38 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.38 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0595 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.53 29 100.0 29 CRMSCA BURIED . . . . . . . . 1.92 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.47 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.65 142 100.0 142 CRMSMC BURIED . . . . . . . . 1.96 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.39 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 4.19 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.82 103 100.0 103 CRMSSC BURIED . . . . . . . . 3.04 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.45 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.76 219 100.0 219 CRMSALL BURIED . . . . . . . . 2.49 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.157 0.930 0.934 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 47.990 0.924 0.928 29 100.0 29 ERRCA BURIED . . . . . . . . 48.597 0.947 0.949 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.094 0.928 0.932 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 47.926 0.922 0.927 142 100.0 142 ERRMC BURIED . . . . . . . . 48.529 0.944 0.946 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 46.477 0.873 0.883 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 46.710 0.881 0.891 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 46.035 0.858 0.871 103 100.0 103 ERRSC BURIED . . . . . . . . 47.613 0.911 0.917 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 47.377 0.904 0.910 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 47.097 0.894 0.902 219 100.0 219 ERRALL BURIED . . . . . . . . 48.107 0.929 0.933 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 15 27 32 37 40 40 40 DISTCA CA (P) 37.50 67.50 80.00 92.50 100.00 40 DISTCA CA (RMS) 0.78 0.98 1.28 1.90 2.38 DISTCA ALL (N) 80 171 203 254 300 303 303 DISTALL ALL (P) 26.40 56.44 67.00 83.83 99.01 303 DISTALL ALL (RMS) 0.76 1.14 1.43 2.18 3.30 DISTALL END of the results output