####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS065_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS065_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.12 2.12 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.89 2.14 LONGEST_CONTINUOUS_SEGMENT: 44 97 - 140 1.74 2.14 LCS_AVERAGE: 97.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.81 2.40 LCS_AVERAGE: 46.52 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 44 45 3 3 3 4 7 11 14 14 33 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT A 97 A 97 4 44 45 3 4 4 6 9 20 34 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT R 98 R 98 16 44 45 5 27 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT G 99 G 99 16 44 45 9 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT W 100 W 100 16 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 101 E 101 16 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 102 C 102 16 44 45 15 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT T 103 T 103 16 44 45 11 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT K 104 K 104 16 44 45 6 27 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT D 105 D 105 16 44 45 5 22 35 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT R 106 R 106 16 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 107 C 107 16 44 45 10 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT G 108 G 108 16 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 109 E 109 16 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT V 110 V 110 16 44 45 5 27 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT R 111 R 111 16 44 45 3 5 13 23 35 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT N 112 N 112 16 44 45 7 27 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 113 E 113 16 44 45 3 15 19 29 38 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 44 45 9 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 44 45 9 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 44 45 9 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 44 45 6 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 44 45 7 21 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 44 45 4 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 44 45 4 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 44 45 7 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 44 45 9 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 44 45 5 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 44 45 11 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 44 45 11 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 44 45 15 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 44 45 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 44 45 11 26 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 44 45 3 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 44 45 3 3 3 3 4 28 31 35 43 43 43 44 44 44 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 81.43 ( 46.52 97.78 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 28 37 40 40 41 42 43 43 43 44 44 44 44 45 45 45 45 45 45 GDT PERCENT_AT 35.56 62.22 82.22 88.89 88.89 91.11 93.33 95.56 95.56 95.56 97.78 97.78 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.63 0.87 0.97 0.97 1.12 1.24 1.47 1.47 1.47 1.89 1.74 1.74 1.74 2.12 2.12 2.12 2.12 2.12 2.12 GDT RMS_ALL_AT 2.24 2.28 2.23 2.20 2.20 2.18 2.17 2.15 2.15 2.15 2.14 2.14 2.14 2.14 2.12 2.12 2.12 2.12 2.12 2.12 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 8.352 0 0.689 0.867 8.951 6.905 6.803 LGA A 97 A 97 5.204 0 0.191 0.196 6.135 44.405 38.952 LGA R 98 R 98 1.178 0 0.434 1.530 4.780 77.619 53.636 LGA G 99 G 99 0.282 0 0.040 0.040 0.635 97.619 97.619 LGA W 100 W 100 0.352 0 0.047 0.314 2.326 100.000 84.490 LGA E 101 E 101 0.663 0 0.128 0.715 4.487 86.071 68.148 LGA C 102 C 102 0.881 0 0.065 0.078 1.458 90.476 87.460 LGA T 103 T 103 1.039 0 0.029 0.210 2.048 83.690 79.116 LGA K 104 K 104 1.103 0 0.058 1.337 4.747 81.429 73.175 LGA D 105 D 105 1.652 0 0.147 1.029 5.176 75.119 60.000 LGA R 106 R 106 0.474 0 0.150 0.982 4.740 92.857 81.342 LGA C 107 C 107 1.263 0 0.032 0.157 1.532 85.952 83.016 LGA G 108 G 108 0.701 0 0.187 0.187 0.941 92.857 92.857 LGA E 109 E 109 0.763 0 0.034 0.953 3.456 85.952 79.524 LGA V 110 V 110 0.914 0 0.673 0.684 3.058 75.952 75.850 LGA R 111 R 111 3.541 0 0.075 1.116 14.366 50.595 20.649 LGA N 112 N 112 1.155 0 0.022 0.919 6.560 77.262 59.226 LGA E 113 E 113 3.300 0 0.203 1.154 8.046 61.190 34.709 LGA E 114 E 114 1.035 0 0.556 1.066 3.053 85.952 70.847 LGA N 115 N 115 1.553 0 0.086 1.329 5.286 77.143 63.690 LGA A 116 A 116 1.470 0 0.032 0.051 1.825 79.286 78.000 LGA C 117 C 117 0.625 0 0.040 0.118 1.236 88.214 87.460 LGA H 118 H 118 0.860 0 0.118 1.138 4.958 88.214 72.238 LGA C 119 C 119 0.936 0 0.076 0.143 1.427 90.476 87.460 LGA S 120 S 120 0.324 0 0.048 0.232 1.209 92.857 92.143 LGA E 121 E 121 0.808 0 0.129 0.746 2.755 88.214 79.048 LGA D 122 D 122 0.389 0 0.211 1.006 4.033 97.619 80.952 LGA C 123 C 123 0.499 0 0.069 0.121 1.327 92.976 93.730 LGA L 124 L 124 1.715 0 0.055 1.000 4.678 75.238 65.893 LGA S 125 S 125 1.723 0 0.214 0.552 2.966 71.071 70.476 LGA R 126 R 126 1.628 0 0.180 0.917 4.735 72.976 70.130 LGA G 127 G 127 1.143 0 0.092 0.092 1.242 81.429 81.429 LGA D 128 D 128 1.082 0 0.110 1.255 3.552 81.429 73.452 LGA C 129 C 129 1.100 0 0.041 0.163 1.114 85.952 85.952 LGA C 130 C 130 0.415 0 0.041 0.621 1.269 95.238 92.143 LGA T 131 T 131 1.266 0 0.154 0.143 2.235 85.952 79.184 LGA N 132 N 132 0.703 0 0.215 0.392 1.571 88.214 88.333 LGA Y 133 Y 133 0.683 0 0.080 0.552 1.743 90.476 84.524 LGA Q 134 Q 134 1.077 0 0.085 0.766 5.411 88.214 66.138 LGA V 135 V 135 0.943 0 0.042 1.111 3.321 88.214 77.347 LGA V 136 V 136 0.397 0 0.104 1.107 2.333 95.238 87.211 LGA C 137 C 137 0.629 0 0.178 0.213 1.139 88.214 87.460 LGA K 138 K 138 1.315 0 0.108 0.862 8.831 88.214 58.360 LGA G 139 G 139 1.251 0 0.741 0.741 4.815 63.333 63.333 LGA E 140 E 140 6.684 0 0.231 1.329 12.572 14.524 7.778 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.115 2.117 3.274 80.019 71.584 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 43 1.47 86.667 91.764 2.736 LGA_LOCAL RMSD: 1.471 Number of atoms: 43 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.147 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.115 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.940417 * X + 0.217315 * Y + -0.261515 * Z + 38.282658 Y_new = -0.102907 * X + -0.551138 * Y + -0.828044 * Z + 84.089439 Z_new = -0.324077 * X + 0.805619 * Y + -0.495936 * Z + 26.924669 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.108993 0.330036 2.122605 [DEG: -6.2449 18.9097 121.6163 ] ZXZ: -0.305909 2.089709 -0.382463 [DEG: -17.5273 119.7315 -21.9135 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS065_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS065_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 43 1.47 91.764 2.12 REMARK ---------------------------------------------------------- MOLECULE T0543TS065_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsnA 3ismA 2o3bA 1ql0A 2ys0A ATOM 728 N THR 96 18.459 90.921 13.354 1.00304.29 N ATOM 729 CA THR 96 17.712 89.761 12.979 1.00304.29 C ATOM 730 C THR 96 16.261 90.107 12.896 1.00304.29 C ATOM 731 O THR 96 15.856 91.240 13.147 1.00304.29 O ATOM 732 CB THR 96 17.844 88.661 13.985 1.00304.29 C ATOM 733 CG2 THR 96 17.110 89.083 15.270 1.00304.29 C ATOM 734 OG1 THR 96 17.293 87.459 13.475 1.00304.29 O ATOM 735 N ALA 97 15.444 89.107 12.508 1.00206.29 N ATOM 736 CA ALA 97 14.022 89.254 12.471 1.00206.29 C ATOM 737 C ALA 97 13.584 89.203 13.893 1.00206.29 C ATOM 738 O ALA 97 14.319 88.721 14.754 1.00206.29 O ATOM 739 CB ALA 97 13.294 88.124 11.724 1.00206.29 C ATOM 740 N ARG 98 12.379 89.718 14.194 1.00213.07 N ATOM 741 CA ARG 98 11.998 89.719 15.572 1.00213.07 C ATOM 742 C ARG 98 11.118 88.536 15.844 1.00213.07 C ATOM 743 O ARG 98 9.898 88.638 15.723 1.00213.07 O ATOM 744 CB ARG 98 11.147 90.939 15.939 1.00213.07 C ATOM 745 CG ARG 98 11.738 92.310 15.602 1.00213.07 C ATOM 746 CD ARG 98 11.692 92.637 14.107 1.00213.07 C ATOM 747 NE ARG 98 11.882 94.107 13.960 1.00213.07 N ATOM 748 CZ ARG 98 13.133 94.650 13.937 1.00213.07 C ATOM 749 NH1 ARG 98 14.229 93.847 14.071 1.00213.07 N ATOM 750 NH2 ARG 98 13.286 95.997 13.782 1.00213.07 N ATOM 751 N GLY 99 11.700 87.381 16.233 1.00 55.09 N ATOM 752 CA GLY 99 10.855 86.303 16.670 1.00 55.09 C ATOM 753 C GLY 99 10.649 85.223 15.644 1.00 55.09 C ATOM 754 O GLY 99 11.283 85.161 14.593 1.00 55.09 O ATOM 755 N TRP 100 9.699 84.338 16.008 1.00117.73 N ATOM 756 CA TRP 100 9.221 83.135 15.382 1.00117.73 C ATOM 757 C TRP 100 8.392 83.424 14.175 1.00117.73 C ATOM 758 O TRP 100 7.833 82.505 13.580 1.00117.73 O ATOM 759 CB TRP 100 8.448 82.227 16.348 1.00117.73 C ATOM 760 CG TRP 100 9.379 81.651 17.385 1.00117.73 C ATOM 761 CD1 TRP 100 9.543 81.988 18.695 1.00117.73 C ATOM 762 CD2 TRP 100 10.347 80.629 17.101 1.00117.73 C ATOM 763 CE2 TRP 100 11.057 80.396 18.278 1.00117.73 C ATOM 764 CE3 TRP 100 10.629 79.949 15.950 1.00117.73 C ATOM 765 NE1 TRP 100 10.552 81.235 19.249 1.00117.73 N ATOM 766 CZ2 TRP 100 12.064 79.475 18.323 1.00117.73 C ATOM 767 CZ3 TRP 100 11.639 79.014 16.001 1.00117.73 C ATOM 768 CH2 TRP 100 12.342 78.781 17.166 1.00117.73 C ATOM 769 N GLU 101 8.166 84.713 13.869 1.00108.87 N ATOM 770 CA GLU 101 7.356 85.085 12.742 1.00108.87 C ATOM 771 C GLU 101 8.222 85.722 11.692 1.00108.87 C ATOM 772 O GLU 101 9.384 86.043 11.933 1.00108.87 O ATOM 773 CB GLU 101 6.305 86.141 13.125 1.00108.87 C ATOM 774 CG GLU 101 5.400 86.598 11.982 1.00108.87 C ATOM 775 CD GLU 101 4.681 87.857 12.453 1.00108.87 C ATOM 776 OE1 GLU 101 5.375 88.766 12.981 1.00108.87 O ATOM 777 OE2 GLU 101 3.433 87.925 12.294 1.00108.87 O ATOM 778 N CYS 102 7.668 85.867 10.464 1.00 67.68 N ATOM 779 CA CYS 102 8.342 86.572 9.406 1.00 67.68 C ATOM 780 C CYS 102 7.438 87.684 8.951 1.00 67.68 C ATOM 781 O CYS 102 6.246 87.703 9.256 1.00 67.68 O ATOM 782 CB CYS 102 8.704 85.737 8.156 1.00 67.68 C ATOM 783 SG CYS 102 10.220 84.740 8.332 1.00 67.68 S ATOM 784 N THR 103 7.999 88.664 8.213 1.00111.44 N ATOM 785 CA THR 103 7.203 89.765 7.747 1.00111.44 C ATOM 786 C THR 103 7.270 89.770 6.253 1.00111.44 C ATOM 787 O THR 103 8.176 89.188 5.660 1.00111.44 O ATOM 788 CB THR 103 7.685 91.109 8.216 1.00111.44 C ATOM 789 CG2 THR 103 7.743 91.101 9.753 1.00111.44 C ATOM 790 OG1 THR 103 8.970 91.387 7.680 1.00111.44 O ATOM 791 N LYS 104 6.316 90.468 5.606 1.00 94.09 N ATOM 792 CA LYS 104 6.239 90.476 4.173 1.00 94.09 C ATOM 793 C LYS 104 7.556 90.948 3.646 1.00 94.09 C ATOM 794 O LYS 104 8.093 90.376 2.699 1.00 94.09 O ATOM 795 CB LYS 104 5.158 91.430 3.648 1.00 94.09 C ATOM 796 CG LYS 104 5.028 91.440 2.125 1.00 94.09 C ATOM 797 CD LYS 104 3.731 92.092 1.642 1.00 94.09 C ATOM 798 CE LYS 104 2.488 91.232 1.887 1.00 94.09 C ATOM 799 NZ LYS 104 2.293 91.011 3.340 1.00 94.09 N ATOM 800 N ASP 105 8.118 92.002 4.264 1.00 35.18 N ATOM 801 CA ASP 105 9.364 92.567 3.829 1.00 35.18 C ATOM 802 C ASP 105 10.471 91.571 4.016 1.00 35.18 C ATOM 803 O ASP 105 11.336 91.422 3.154 1.00 35.18 O ATOM 804 CB ASP 105 9.747 93.826 4.627 1.00 35.18 C ATOM 805 CG ASP 105 8.767 94.931 4.263 1.00 35.18 C ATOM 806 OD1 ASP 105 8.184 94.863 3.147 1.00 35.18 O ATOM 807 OD2 ASP 105 8.585 95.857 5.098 1.00 35.18 O ATOM 808 N ARG 106 10.449 90.826 5.135 1.00 98.09 N ATOM 809 CA ARG 106 11.516 89.923 5.464 1.00 98.09 C ATOM 810 C ARG 106 11.643 88.910 4.373 1.00 98.09 C ATOM 811 O ARG 106 12.746 88.464 4.060 1.00 98.09 O ATOM 812 CB ARG 106 11.277 89.172 6.783 1.00 98.09 C ATOM 813 CG ARG 106 11.397 90.065 8.020 1.00 98.09 C ATOM 814 CD ARG 106 12.837 90.234 8.506 1.00 98.09 C ATOM 815 NE ARG 106 13.305 88.896 8.963 1.00 98.09 N ATOM 816 CZ ARG 106 14.639 88.640 9.099 1.00 98.09 C ATOM 817 NH1 ARG 106 15.554 89.609 8.804 1.00 98.09 N ATOM 818 NH2 ARG 106 15.062 87.417 9.531 1.00 98.09 N ATOM 819 N CYS 107 10.512 88.525 3.761 1.00 51.03 N ATOM 820 CA CYS 107 10.515 87.516 2.743 1.00 51.03 C ATOM 821 C CYS 107 11.497 87.913 1.682 1.00 51.03 C ATOM 822 O CYS 107 11.501 89.052 1.215 1.00 51.03 O ATOM 823 CB CYS 107 9.139 87.371 2.064 1.00 51.03 C ATOM 824 SG CYS 107 7.806 87.119 3.273 1.00 51.03 S ATOM 825 N GLY 108 12.359 86.959 1.273 1.00 28.70 N ATOM 826 CA GLY 108 13.337 87.227 0.252 1.00 28.70 C ATOM 827 C GLY 108 14.434 88.062 0.837 1.00 28.70 C ATOM 828 O GLY 108 14.947 88.966 0.177 1.00 28.70 O ATOM 829 N GLU 109 14.830 87.771 2.095 1.00 95.89 N ATOM 830 CA GLU 109 15.826 88.567 2.757 1.00 95.89 C ATOM 831 C GLU 109 17.175 87.935 2.662 1.00 95.89 C ATOM 832 O GLU 109 17.339 86.715 2.658 1.00 95.89 O ATOM 833 CB GLU 109 15.518 88.808 4.247 1.00 95.89 C ATOM 834 CG GLU 109 15.382 87.523 5.070 1.00 95.89 C ATOM 835 CD GLU 109 16.774 87.035 5.440 1.00 95.89 C ATOM 836 OE1 GLU 109 17.646 87.904 5.702 1.00 95.89 O ATOM 837 OE2 GLU 109 16.993 85.794 5.459 1.00 95.89 O ATOM 838 N VAL 110 18.153 88.842 2.496 1.00161.34 N ATOM 839 CA VAL 110 19.565 88.710 2.347 1.00161.34 C ATOM 840 C VAL 110 20.337 88.436 3.604 1.00161.34 C ATOM 841 O VAL 110 21.407 87.841 3.519 1.00161.34 O ATOM 842 CB VAL 110 20.125 89.951 1.720 1.00161.34 C ATOM 843 CG1 VAL 110 19.615 91.156 2.528 1.00161.34 C ATOM 844 CG2 VAL 110 21.656 89.840 1.656 1.00161.34 C ATOM 845 N ARG 111 19.919 88.903 4.798 1.00198.04 N ATOM 846 CA ARG 111 20.847 88.615 5.860 1.00198.04 C ATOM 847 C ARG 111 20.158 88.312 7.146 1.00198.04 C ATOM 848 O ARG 111 19.138 88.910 7.493 1.00198.04 O ATOM 849 CB ARG 111 21.841 89.747 6.137 1.00198.04 C ATOM 850 CG ARG 111 21.155 91.067 6.467 1.00198.04 C ATOM 851 CD ARG 111 20.686 91.781 5.205 1.00198.04 C ATOM 852 NE ARG 111 21.875 91.873 4.314 1.00198.04 N ATOM 853 CZ ARG 111 21.915 92.809 3.324 1.00198.04 C ATOM 854 NH1 ARG 111 20.870 93.672 3.167 1.00198.04 N ATOM 855 NH2 ARG 111 22.989 92.869 2.484 1.00198.04 N ATOM 856 N ASN 112 20.734 87.343 7.886 1.00106.64 N ATOM 857 CA ASN 112 20.244 86.948 9.169 1.00106.64 C ATOM 858 C ASN 112 21.430 86.600 10.012 1.00106.64 C ATOM 859 O ASN 112 22.167 85.665 9.696 1.00106.64 O ATOM 860 CB ASN 112 19.371 85.684 9.090 1.00106.64 C ATOM 861 CG ASN 112 18.913 85.300 10.489 1.00106.64 C ATOM 862 ND2 ASN 112 18.343 84.072 10.606 1.00106.64 N ATOM 863 OD1 ASN 112 19.075 86.050 11.450 1.00106.64 O ATOM 864 N GLU 113 21.699 87.385 11.075 1.00135.54 N ATOM 865 CA GLU 113 22.804 87.022 11.914 1.00135.54 C ATOM 866 C GLU 113 22.371 85.881 12.783 1.00135.54 C ATOM 867 O GLU 113 22.983 84.816 12.811 1.00135.54 O ATOM 868 CB GLU 113 23.237 88.168 12.847 1.00135.54 C ATOM 869 CG GLU 113 24.732 88.198 13.195 1.00135.54 C ATOM 870 CD GLU 113 25.245 86.797 13.506 1.00135.54 C ATOM 871 OE1 GLU 113 25.242 85.948 12.577 1.00135.54 O ATOM 872 OE2 GLU 113 25.671 86.567 14.668 1.00135.54 O ATOM 873 N GLU 114 21.244 86.085 13.492 1.00144.28 N ATOM 874 CA GLU 114 20.743 85.097 14.396 1.00144.28 C ATOM 875 C GLU 114 19.276 85.323 14.511 1.00144.28 C ATOM 876 O GLU 114 18.816 86.253 15.170 1.00144.28 O ATOM 877 CB GLU 114 21.356 85.186 15.806 1.00144.28 C ATOM 878 CG GLU 114 21.215 86.565 16.451 1.00144.28 C ATOM 879 CD GLU 114 22.163 87.507 15.728 1.00144.28 C ATOM 880 OE1 GLU 114 23.309 87.071 15.442 1.00144.28 O ATOM 881 OE2 GLU 114 21.764 88.669 15.450 1.00144.28 O ATOM 882 N ASN 115 18.498 84.454 13.856 1.00102.88 N ATOM 883 CA ASN 115 17.074 84.557 13.896 1.00102.88 C ATOM 884 C ASN 115 16.617 83.169 14.138 1.00102.88 C ATOM 885 O ASN 115 17.242 82.219 13.670 1.00102.88 O ATOM 886 CB ASN 115 16.448 84.985 12.553 1.00102.88 C ATOM 887 CG ASN 115 14.962 85.268 12.746 1.00102.88 C ATOM 888 ND2 ASN 115 14.514 85.416 14.021 1.00102.88 N ATOM 889 OD1 ASN 115 14.219 85.364 11.770 1.00102.88 O ATOM 890 N ALA 116 15.514 83.014 14.883 1.00 35.61 N ATOM 891 CA ALA 116 15.054 81.692 15.157 1.00 35.61 C ATOM 892 C ALA 116 14.716 81.040 13.851 1.00 35.61 C ATOM 893 O ALA 116 15.092 79.894 13.605 1.00 35.61 O ATOM 894 CB ALA 116 13.787 81.666 16.027 1.00 35.61 C ATOM 895 N CYS 117 14.023 81.773 12.957 1.00 56.54 N ATOM 896 CA CYS 117 13.603 81.204 11.704 1.00 56.54 C ATOM 897 C CYS 117 14.249 81.974 10.592 1.00 56.54 C ATOM 898 O CYS 117 14.940 82.962 10.837 1.00 56.54 O ATOM 899 CB CYS 117 12.071 81.243 11.485 1.00 56.54 C ATOM 900 SG CYS 117 11.386 82.927 11.409 1.00 56.54 S ATOM 901 N HIS 118 14.070 81.520 9.329 1.00 85.26 N ATOM 902 CA HIS 118 14.700 82.221 8.243 1.00 85.26 C ATOM 903 C HIS 118 13.648 82.585 7.229 1.00 85.26 C ATOM 904 O HIS 118 12.867 81.755 6.771 1.00 85.26 O ATOM 905 CB HIS 118 15.813 81.393 7.581 1.00 85.26 C ATOM 906 CG HIS 118 16.873 82.238 6.937 1.00 85.26 C ATOM 907 CD2 HIS 118 17.820 83.015 7.527 1.00 85.26 C ATOM 908 ND1 HIS 118 17.073 82.364 5.581 1.00 85.26 N ATOM 909 CE1 HIS 118 18.128 83.205 5.421 1.00 85.26 C ATOM 910 NE2 HIS 118 18.614 83.626 6.574 1.00 85.26 N ATOM 911 N CYS 119 13.576 83.893 6.924 1.00124.93 N ATOM 912 CA CYS 119 12.677 84.554 6.018 1.00124.93 C ATOM 913 C CYS 119 13.143 84.496 4.580 1.00124.93 C ATOM 914 O CYS 119 12.609 85.216 3.734 1.00124.93 O ATOM 915 CB CYS 119 12.358 85.998 6.449 1.00124.93 C ATOM 916 SG CYS 119 11.748 86.087 8.173 1.00124.93 S ATOM 917 N SER 120 14.241 83.769 4.269 1.00113.12 N ATOM 918 CA SER 120 14.707 83.796 2.899 1.00113.12 C ATOM 919 C SER 120 14.322 82.545 2.165 1.00113.12 C ATOM 920 O SER 120 13.859 81.563 2.737 1.00113.12 O ATOM 921 CB SER 120 16.226 83.945 2.732 1.00113.12 C ATOM 922 OG SER 120 16.860 82.689 2.910 1.00113.12 O ATOM 923 N GLU 121 14.547 82.567 0.836 1.00117.54 N ATOM 924 CA GLU 121 14.183 81.516 -0.072 1.00117.54 C ATOM 925 C GLU 121 14.908 80.255 0.281 1.00117.54 C ATOM 926 O GLU 121 14.360 79.161 0.159 1.00117.54 O ATOM 927 CB GLU 121 14.524 81.855 -1.531 1.00117.54 C ATOM 928 CG GLU 121 13.934 80.869 -2.536 1.00117.54 C ATOM 929 CD GLU 121 12.429 81.098 -2.577 1.00117.54 C ATOM 930 OE1 GLU 121 11.909 81.769 -1.647 1.00117.54 O ATOM 931 OE2 GLU 121 11.783 80.604 -3.538 1.00117.54 O ATOM 932 N ASP 122 16.153 80.380 0.769 1.00 54.34 N ATOM 933 CA ASP 122 16.983 79.245 1.057 1.00 54.34 C ATOM 934 C ASP 122 16.240 78.367 2.018 1.00 54.34 C ATOM 935 O ASP 122 16.329 77.143 1.950 1.00 54.34 O ATOM 936 CB ASP 122 18.308 79.667 1.720 1.00 54.34 C ATOM 937 CG ASP 122 19.275 78.490 1.761 1.00 54.34 C ATOM 938 OD1 ASP 122 18.830 77.325 1.588 1.00 54.34 O ATOM 939 OD2 ASP 122 20.488 78.752 1.968 1.00 54.34 O ATOM 940 N CYS 123 15.440 78.978 2.908 1.00 57.96 N ATOM 941 CA CYS 123 14.740 78.221 3.904 1.00 57.96 C ATOM 942 C CYS 123 13.886 77.221 3.201 1.00 57.96 C ATOM 943 O CYS 123 13.656 76.129 3.711 1.00 57.96 O ATOM 944 CB CYS 123 13.792 79.054 4.800 1.00 57.96 C ATOM 945 SG CYS 123 12.260 79.591 3.969 1.00 57.96 S ATOM 946 N LEU 124 13.370 77.556 2.011 1.00 78.14 N ATOM 947 CA LEU 124 12.522 76.609 1.350 1.00 78.14 C ATOM 948 C LEU 124 13.296 75.351 1.081 1.00 78.14 C ATOM 949 O LEU 124 12.804 74.250 1.327 1.00 78.14 O ATOM 950 CB LEU 124 11.990 77.132 0.002 1.00 78.14 C ATOM 951 CG LEU 124 11.034 78.333 0.138 1.00 78.14 C ATOM 952 CD1 LEU 124 9.722 77.931 0.831 1.00 78.14 C ATOM 953 CD2 LEU 124 11.722 79.524 0.824 1.00 78.14 C ATOM 954 N SER 125 14.533 75.475 0.562 1.00 68.35 N ATOM 955 CA SER 125 15.316 74.312 0.252 1.00 68.35 C ATOM 956 C SER 125 15.677 73.579 1.510 1.00 68.35 C ATOM 957 O SER 125 15.426 72.382 1.633 1.00 68.35 O ATOM 958 CB SER 125 16.632 74.663 -0.462 1.00 68.35 C ATOM 959 OG SER 125 17.364 73.481 -0.748 1.00 68.35 O ATOM 960 N ARG 126 16.274 74.297 2.481 1.00106.00 N ATOM 961 CA ARG 126 16.772 73.711 3.701 1.00106.00 C ATOM 962 C ARG 126 15.663 73.151 4.544 1.00106.00 C ATOM 963 O ARG 126 15.790 72.045 5.066 1.00106.00 O ATOM 964 CB ARG 126 17.551 74.710 4.571 1.00106.00 C ATOM 965 CG ARG 126 18.880 75.150 3.958 1.00106.00 C ATOM 966 CD ARG 126 19.691 76.076 4.869 1.00106.00 C ATOM 967 NE ARG 126 18.908 77.331 5.038 1.00106.00 N ATOM 968 CZ ARG 126 19.189 78.177 6.073 1.00106.00 C ATOM 969 NH1 ARG 126 20.185 77.871 6.955 1.00106.00 N ATOM 970 NH2 ARG 126 18.470 79.326 6.227 1.00106.00 N ATOM 971 N GLY 127 14.532 73.877 4.666 1.00 51.70 N ATOM 972 CA GLY 127 13.439 73.451 5.505 1.00 51.70 C ATOM 973 C GLY 127 13.368 74.275 6.769 1.00 51.70 C ATOM 974 O GLY 127 12.747 73.860 7.746 1.00 51.70 O ATOM 975 N ASP 128 14.064 75.432 6.784 1.00111.33 N ATOM 976 CA ASP 128 14.172 76.420 7.836 1.00111.33 C ATOM 977 C ASP 128 13.029 77.407 7.909 1.00111.33 C ATOM 978 O ASP 128 13.029 78.268 8.785 1.00111.33 O ATOM 979 CB ASP 128 15.488 77.199 7.757 1.00111.33 C ATOM 980 CG ASP 128 16.573 76.197 8.122 1.00111.33 C ATOM 981 OD1 ASP 128 16.265 75.256 8.903 1.00111.33 O ATOM 982 OD2 ASP 128 17.717 76.347 7.619 1.00111.33 O ATOM 983 N CYS 129 12.071 77.395 6.967 1.00 92.37 N ATOM 984 CA CYS 129 11.071 78.433 6.890 1.00 92.37 C ATOM 985 C CYS 129 10.268 78.587 8.161 1.00 92.37 C ATOM 986 O CYS 129 9.885 77.633 8.835 1.00 92.37 O ATOM 987 CB CYS 129 10.115 78.225 5.707 1.00 92.37 C ATOM 988 SG CYS 129 10.991 78.005 4.123 1.00 92.37 S ATOM 989 N CYS 130 9.950 79.859 8.471 1.00107.81 N ATOM 990 CA CYS 130 9.299 80.310 9.668 1.00107.81 C ATOM 991 C CYS 130 7.934 79.686 9.692 1.00107.81 C ATOM 992 O CYS 130 7.428 79.240 8.663 1.00107.81 O ATOM 993 CB CYS 130 9.195 81.843 9.622 1.00107.81 C ATOM 994 SG CYS 130 9.374 82.656 11.225 1.00107.81 S ATOM 995 N THR 131 7.300 79.625 10.881 1.00121.11 N ATOM 996 CA THR 131 6.043 78.947 11.025 1.00121.11 C ATOM 997 C THR 131 5.043 79.559 10.098 1.00121.11 C ATOM 998 O THR 131 4.335 78.845 9.390 1.00121.11 O ATOM 999 CB THR 131 5.486 79.056 12.414 1.00121.11 C ATOM 1000 CG2 THR 131 6.525 78.496 13.403 1.00121.11 C ATOM 1001 OG1 THR 131 5.204 80.412 12.723 1.00121.11 O ATOM 1002 N ASN 132 4.955 80.902 10.072 1.00107.06 N ATOM 1003 CA ASN 132 3.995 81.521 9.205 1.00107.06 C ATOM 1004 C ASN 132 4.729 82.143 8.060 1.00107.06 C ATOM 1005 O ASN 132 4.457 83.280 7.676 1.00107.06 O ATOM 1006 CB ASN 132 3.210 82.634 9.920 1.00107.06 C ATOM 1007 CG ASN 132 4.199 83.698 10.377 1.00107.06 C ATOM 1008 ND2 ASN 132 3.984 84.962 9.924 1.00107.06 N ATOM 1009 OD1 ASN 132 5.139 83.412 11.116 1.00107.06 O ATOM 1010 N TYR 133 5.683 81.396 7.480 1.00 70.23 N ATOM 1011 CA TYR 133 6.451 81.883 6.370 1.00 70.23 C ATOM 1012 C TYR 133 5.563 81.941 5.168 1.00 70.23 C ATOM 1013 O TYR 133 5.556 82.927 4.430 1.00 70.23 O ATOM 1014 CB TYR 133 7.650 80.964 6.069 1.00 70.23 C ATOM 1015 CG TYR 133 8.435 81.490 4.915 1.00 70.23 C ATOM 1016 CD1 TYR 133 8.080 81.178 3.623 1.00 70.23 C ATOM 1017 CD2 TYR 133 9.537 82.288 5.127 1.00 70.23 C ATOM 1018 CE1 TYR 133 8.809 81.657 2.560 1.00 70.23 C ATOM 1019 CE2 TYR 133 10.271 82.772 4.068 1.00 70.23 C ATOM 1020 CZ TYR 133 9.905 82.456 2.781 1.00 70.23 C ATOM 1021 OH TYR 133 10.654 82.949 1.690 1.00 70.23 O ATOM 1022 N GLN 134 4.782 80.859 4.961 1.00 48.58 N ATOM 1023 CA GLN 134 3.893 80.699 3.849 1.00 48.58 C ATOM 1024 C GLN 134 2.795 81.704 3.920 1.00 48.58 C ATOM 1025 O GLN 134 2.444 82.326 2.921 1.00 48.58 O ATOM 1026 CB GLN 134 3.202 79.325 3.866 1.00 48.58 C ATOM 1027 CG GLN 134 2.127 79.159 2.789 1.00 48.58 C ATOM 1028 CD GLN 134 1.475 77.795 2.985 1.00 48.58 C ATOM 1029 NE2 GLN 134 0.582 77.405 2.037 1.00 48.58 N ATOM 1030 OE1 GLN 134 1.745 77.098 3.962 1.00 48.58 O ATOM 1031 N VAL 135 2.218 81.897 5.114 1.00108.07 N ATOM 1032 CA VAL 135 1.103 82.787 5.170 1.00108.07 C ATOM 1033 C VAL 135 1.525 84.150 4.738 1.00108.07 C ATOM 1034 O VAL 135 0.890 84.747 3.872 1.00108.07 O ATOM 1035 CB VAL 135 0.492 82.914 6.534 1.00108.07 C ATOM 1036 CG1 VAL 135 1.582 83.274 7.553 1.00108.07 C ATOM 1037 CG2 VAL 135 -0.602 83.988 6.436 1.00108.07 C ATOM 1038 N VAL 136 2.599 84.687 5.337 1.00123.23 N ATOM 1039 CA VAL 136 3.016 86.003 4.959 1.00123.23 C ATOM 1040 C VAL 136 3.614 86.035 3.586 1.00123.23 C ATOM 1041 O VAL 136 3.160 86.785 2.725 1.00123.23 O ATOM 1042 CB VAL 136 4.010 86.606 5.916 1.00123.23 C ATOM 1043 CG1 VAL 136 3.288 86.919 7.231 1.00123.23 C ATOM 1044 CG2 VAL 136 5.187 85.633 6.105 1.00123.23 C ATOM 1045 N CYS 137 4.672 85.231 3.358 1.00 76.48 N ATOM 1046 CA CYS 137 5.374 85.262 2.103 1.00 76.48 C ATOM 1047 C CYS 137 4.593 84.644 0.982 1.00 76.48 C ATOM 1048 O CYS 137 4.384 85.257 -0.063 1.00 76.48 O ATOM 1049 CB CYS 137 6.717 84.518 2.174 1.00 76.48 C ATOM 1050 SG CYS 137 7.758 85.109 3.539 1.00 76.48 S ATOM 1051 N LYS 138 4.105 83.412 1.213 1.00100.73 N ATOM 1052 CA LYS 138 3.453 82.576 0.246 1.00100.73 C ATOM 1053 C LYS 138 2.147 83.140 -0.143 1.00100.73 C ATOM 1054 O LYS 138 1.474 82.563 -0.987 1.00100.73 O ATOM 1055 CB LYS 138 3.298 81.094 0.642 1.00100.73 C ATOM 1056 CG LYS 138 4.625 80.332 0.561 1.00100.73 C ATOM 1057 CD LYS 138 4.593 78.935 1.184 1.00100.73 C ATOM 1058 CE LYS 138 5.913 78.169 1.051 1.00100.73 C ATOM 1059 NZ LYS 138 5.784 76.837 1.682 1.00100.73 N ATOM 1060 N GLY 139 1.703 84.224 0.511 1.00 44.93 N ATOM 1061 CA GLY 139 0.446 84.792 0.130 1.00 44.93 C ATOM 1062 C GLY 139 0.533 85.118 -1.335 1.00 44.93 C ATOM 1063 O GLY 139 1.618 85.160 -1.916 1.00 44.93 O ATOM 1064 N GLU 140 -0.625 85.334 -1.991 1.00 89.22 N ATOM 1065 CA GLU 140 -0.574 85.552 -3.405 1.00 89.22 C ATOM 1066 C GLU 140 -0.726 87.010 -3.689 1.00 89.22 C ATOM 1067 O GLU 140 -1.772 87.604 -3.432 1.00 89.22 O ATOM 1068 CB GLU 140 -1.674 84.792 -4.170 1.00 89.22 C ATOM 1069 CG GLU 140 -1.438 84.675 -5.679 1.00 89.22 C ATOM 1070 CD GLU 140 -2.057 85.869 -6.392 1.00 89.22 C ATOM 1071 OE1 GLU 140 -2.576 86.784 -5.699 1.00 89.22 O ATOM 1072 OE2 GLU 140 -2.022 85.876 -7.651 1.00 89.22 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 48.91 67.0 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 54.47 64.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 31.96 73.1 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.92 51.3 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 71.86 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 81.74 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 55.03 61.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.80 26.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 80.81 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 82.97 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 103.74 0.0 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.57 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 75.37 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 74.34 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 70.96 66.7 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.80 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 72.80 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 83.67 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 43.58 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.12 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.12 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0470 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.36 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.35 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.24 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.48 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.51 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.21 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 4.29 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.04 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.53 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.29 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.25 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.36 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 100.401 0.968 0.969 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 101.467 0.964 0.965 32 100.0 32 ERRCA BURIED . . . . . . . . 97.774 0.978 0.978 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 101.329 0.966 0.967 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 102.847 0.962 0.963 156 100.0 156 ERRMC BURIED . . . . . . . . 97.687 0.976 0.977 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 107.610 0.942 0.945 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 109.005 0.944 0.946 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 110.601 0.936 0.939 112 100.0 112 ERRSC BURIED . . . . . . . . 101.291 0.954 0.956 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 103.837 0.955 0.957 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 105.725 0.950 0.953 240 100.0 240 ERRALL BURIED . . . . . . . . 99.520 0.965 0.966 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 17 40 40 43 45 45 45 DISTCA CA (P) 37.78 88.89 88.89 95.56 100.00 45 DISTCA CA (RMS) 0.74 1.13 1.13 1.52 2.12 DISTCA ALL (N) 84 230 274 309 338 345 345 DISTALL ALL (P) 24.35 66.67 79.42 89.57 97.97 345 DISTALL ALL (RMS) 0.75 1.20 1.50 1.94 2.80 DISTALL END of the results output