####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS060_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS060_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.20 2.20 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.96 2.22 LONGEST_CONTINUOUS_SEGMENT: 44 97 - 140 1.97 2.22 LCS_AVERAGE: 97.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.89 2.31 LCS_AVERAGE: 42.81 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 44 45 3 3 4 5 20 35 36 42 42 42 43 44 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 44 45 3 3 4 5 15 33 40 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 44 45 3 3 5 6 12 24 38 40 41 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 12 44 45 12 27 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 12 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 12 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 12 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 12 44 45 7 27 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 12 44 45 7 20 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 12 44 45 7 21 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 12 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 12 44 45 10 25 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 12 44 45 12 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 12 44 45 7 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 12 44 45 7 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 11 44 45 3 4 9 19 31 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 12 44 45 7 25 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 12 44 45 3 9 16 28 36 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 44 45 3 21 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 44 45 3 4 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 44 45 3 16 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 44 45 4 22 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 44 45 10 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 44 45 10 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 44 45 10 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 44 45 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 44 45 13 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 44 45 5 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 44 45 3 3 3 3 4 16 20 39 43 44 44 44 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 80.20 ( 42.81 97.78 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 28 34 39 39 41 41 42 43 44 44 44 45 45 45 45 45 45 45 45 GDT PERCENT_AT 31.11 62.22 75.56 86.67 86.67 91.11 91.11 93.33 95.56 97.78 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.40 0.62 0.78 1.02 1.02 1.31 1.31 1.51 1.82 1.97 1.97 1.96 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 GDT RMS_ALL_AT 2.26 2.34 2.34 2.28 2.28 2.24 2.24 2.22 2.20 2.22 2.22 2.22 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 # Checking swapping # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 6.455 0 0.594 0.584 9.383 26.190 20.136 LGA A 97 A 97 4.907 0 0.160 0.185 7.560 31.429 26.571 LGA R 98 R 98 5.663 0 0.519 0.789 15.971 26.548 10.346 LGA G 99 G 99 0.557 0 0.228 0.228 1.838 90.833 90.833 LGA W 100 W 100 0.309 0 0.172 0.422 4.845 90.833 65.034 LGA E 101 E 101 0.798 0 0.082 0.947 3.657 92.857 78.571 LGA C 102 C 102 0.816 0 0.005 0.732 1.848 85.952 84.524 LGA T 103 T 103 1.394 0 0.051 0.174 2.355 77.143 72.993 LGA K 104 K 104 1.831 0 0.053 0.470 2.921 72.857 67.566 LGA D 105 D 105 1.927 0 0.107 0.325 2.153 72.857 71.845 LGA R 106 R 106 0.757 0 0.089 1.195 6.672 88.214 69.004 LGA C 107 C 107 1.608 0 0.073 0.704 4.303 81.548 71.349 LGA G 108 G 108 0.896 0 0.065 0.065 1.168 83.690 83.690 LGA E 109 E 109 1.315 0 0.007 1.102 6.660 83.690 57.831 LGA V 110 V 110 1.433 0 0.633 0.953 4.443 73.214 63.537 LGA R 111 R 111 3.596 0 0.033 1.090 15.316 54.048 21.861 LGA N 112 N 112 1.098 0 0.200 1.090 6.333 83.690 57.202 LGA E 113 E 113 3.503 0 0.718 1.533 10.450 44.167 23.968 LGA E 114 E 114 1.350 0 0.160 1.039 5.061 81.548 63.228 LGA N 115 N 115 0.396 0 0.068 1.001 3.025 100.000 86.845 LGA A 116 A 116 0.326 0 0.064 0.093 0.676 97.619 98.095 LGA C 117 C 117 0.281 0 0.094 0.693 1.900 100.000 93.889 LGA H 118 H 118 0.682 0 0.149 1.153 3.091 88.214 80.286 LGA C 119 C 119 0.587 0 0.222 0.245 1.318 88.214 85.952 LGA S 120 S 120 0.417 0 0.035 0.087 0.878 95.238 93.651 LGA E 121 E 121 1.103 0 0.089 0.450 2.422 85.952 77.831 LGA D 122 D 122 0.281 0 0.174 0.516 1.860 97.619 94.226 LGA C 123 C 123 0.358 0 0.066 0.788 3.915 97.619 87.381 LGA L 124 L 124 1.794 0 0.077 1.457 4.637 71.310 68.095 LGA S 125 S 125 2.173 0 0.204 0.687 3.826 63.095 61.429 LGA R 126 R 126 1.894 0 0.128 0.689 4.622 70.833 64.978 LGA G 127 G 127 1.052 0 0.236 0.236 1.428 81.429 81.429 LGA D 128 D 128 1.058 0 0.126 1.223 3.534 83.690 75.655 LGA C 129 C 129 0.913 0 0.044 0.250 0.955 92.857 92.063 LGA C 130 C 130 0.421 0 0.021 0.035 1.197 95.238 92.143 LGA T 131 T 131 1.063 0 0.153 0.149 1.860 88.214 81.633 LGA N 132 N 132 0.576 0 0.178 1.070 4.373 88.214 74.643 LGA Y 133 Y 133 0.562 0 0.068 0.467 1.498 92.857 88.254 LGA Q 134 Q 134 1.064 0 0.058 0.632 4.995 88.214 61.905 LGA V 135 V 135 1.060 0 0.034 0.085 1.550 85.952 82.789 LGA V 136 V 136 0.540 0 0.003 0.072 0.738 95.238 94.558 LGA C 137 C 137 0.638 0 0.155 0.789 3.149 88.214 82.222 LGA K 138 K 138 1.130 0 0.181 0.379 2.806 85.952 73.386 LGA G 139 G 139 1.296 0 0.535 0.535 5.355 58.095 58.095 LGA E 140 E 140 7.202 0 0.301 1.105 8.723 11.786 8.995 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.197 2.198 3.723 78.511 69.789 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.51 85.556 90.945 2.606 LGA_LOCAL RMSD: 1.512 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.219 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.197 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.581331 * X + 0.774437 * Y + -0.249603 * Z + -86.000092 Y_new = 0.258201 * X + 0.115328 * Y + 0.959183 * Z + -59.204742 Z_new = 0.771613 * X + -0.622051 * Y + -0.132917 * Z + -0.712907 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.417982 -0.881373 -1.781305 [DEG: 23.9486 -50.4989 -102.0613 ] ZXZ: -2.887014 1.704107 2.249288 [DEG: -165.4137 97.6382 128.8747 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS060_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS060_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.51 90.945 2.20 REMARK ---------------------------------------------------------- MOLECULE T0543TS060_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 17.122 91.448 20.681 1.00 0.00 N ATOM 729 CA THR 96 15.834 91.002 20.230 1.00 0.00 C ATOM 730 CB THR 96 15.552 91.401 18.814 1.00 0.00 C ATOM 731 OG1 THR 96 15.662 92.809 18.672 1.00 0.00 O ATOM 732 CG2 THR 96 14.130 90.943 18.456 1.00 0.00 C ATOM 733 C THR 96 15.674 89.518 20.321 1.00 0.00 C ATOM 734 O THR 96 16.308 88.752 19.601 1.00 0.00 O ATOM 735 N ALA 97 14.830 89.105 21.296 1.00 0.00 N ATOM 736 CA ALA 97 14.490 87.743 21.601 1.00 0.00 C ATOM 737 CB ALA 97 13.512 87.609 22.782 1.00 0.00 C ATOM 738 C ALA 97 13.863 87.093 20.407 1.00 0.00 C ATOM 739 O ALA 97 13.435 87.745 19.454 1.00 0.00 O ATOM 740 N ARG 98 13.823 85.748 20.444 1.00 0.00 N ATOM 741 CA ARG 98 13.379 84.957 19.335 1.00 0.00 C ATOM 742 CB ARG 98 13.497 83.447 19.594 1.00 0.00 C ATOM 743 CG ARG 98 12.975 82.632 18.419 1.00 0.00 C ATOM 744 CD ARG 98 13.206 81.125 18.483 1.00 0.00 C ATOM 745 NE ARG 98 12.893 80.624 17.119 1.00 0.00 N ATOM 746 CZ ARG 98 12.663 79.299 16.893 1.00 0.00 C ATOM 747 NH1 ARG 98 12.674 78.417 17.934 1.00 0.00 H ATOM 748 NH2 ARG 98 12.412 78.869 15.625 1.00 0.00 H ATOM 749 C ARG 98 11.953 85.221 18.976 1.00 0.00 C ATOM 750 O ARG 98 11.026 84.930 19.728 1.00 0.00 O ATOM 751 N GLY 99 11.753 85.748 17.758 1.00 0.00 N ATOM 752 CA GLY 99 10.440 85.912 17.211 1.00 0.00 C ATOM 753 C GLY 99 10.394 84.895 16.118 1.00 0.00 C ATOM 754 O GLY 99 11.387 84.686 15.431 1.00 0.00 O ATOM 755 N TRP 100 9.268 84.173 16.002 1.00 0.00 N ATOM 756 CA TRP 100 9.028 83.167 15.002 1.00 0.00 C ATOM 757 CB TRP 100 7.923 82.188 15.423 1.00 0.00 C ATOM 758 CG TRP 100 8.355 81.298 16.558 1.00 0.00 C ATOM 759 CD2 TRP 100 8.850 79.963 16.379 1.00 0.00 C ATOM 760 CD1 TRP 100 8.368 81.541 17.901 1.00 0.00 C ATOM 761 NE1 TRP 100 8.840 80.437 18.570 1.00 0.00 N ATOM 762 CE2 TRP 100 9.137 79.459 17.645 1.00 0.00 C ATOM 763 CE3 TRP 100 9.045 79.220 15.247 1.00 0.00 C ATOM 764 CZ2 TRP 100 9.629 78.193 17.804 1.00 0.00 C ATOM 765 CZ3 TRP 100 9.541 77.944 15.413 1.00 0.00 C ATOM 766 CH2 TRP 100 9.826 77.441 16.665 1.00 0.00 H ATOM 767 C TRP 100 8.628 83.747 13.675 1.00 0.00 C ATOM 768 O TRP 100 8.788 83.107 12.636 1.00 0.00 O ATOM 769 N GLU 101 8.070 84.968 13.687 1.00 0.00 N ATOM 770 CA GLU 101 7.328 85.466 12.562 1.00 0.00 C ATOM 771 CB GLU 101 6.198 86.416 12.985 1.00 0.00 C ATOM 772 CG GLU 101 5.114 85.719 13.809 1.00 0.00 C ATOM 773 CD GLU 101 4.347 84.793 12.874 1.00 0.00 C ATOM 774 OE1 GLU 101 4.997 84.131 12.023 1.00 0.00 O ATOM 775 OE2 GLU 101 3.094 84.728 13.005 1.00 0.00 O ATOM 776 C GLU 101 8.091 86.163 11.481 1.00 0.00 C ATOM 777 O GLU 101 8.887 87.073 11.706 1.00 0.00 O ATOM 778 N CYS 102 7.786 85.732 10.239 1.00 0.00 N ATOM 779 CA CYS 102 8.308 86.277 9.019 1.00 0.00 C ATOM 780 CB CYS 102 8.332 85.241 7.882 1.00 0.00 C ATOM 781 SG CYS 102 8.991 85.898 6.320 1.00 0.00 S ATOM 782 C CYS 102 7.420 87.404 8.587 1.00 0.00 C ATOM 783 O CYS 102 6.218 87.411 8.852 1.00 0.00 O ATOM 784 N THR 103 8.012 88.402 7.903 1.00 0.00 N ATOM 785 CA THR 103 7.264 89.506 7.374 1.00 0.00 C ATOM 786 CB THR 103 7.781 90.842 7.821 1.00 0.00 C ATOM 787 OG1 THR 103 9.129 91.000 7.409 1.00 0.00 O ATOM 788 CG2 THR 103 7.679 90.934 9.356 1.00 0.00 C ATOM 789 C THR 103 7.420 89.422 5.886 1.00 0.00 C ATOM 790 O THR 103 8.312 88.737 5.388 1.00 0.00 O ATOM 791 N LYS 104 6.534 90.097 5.131 1.00 0.00 N ATOM 792 CA LYS 104 6.598 90.047 3.697 1.00 0.00 C ATOM 793 CB LYS 104 5.459 90.819 3.010 1.00 0.00 C ATOM 794 CG LYS 104 5.300 90.440 1.535 1.00 0.00 C ATOM 795 CD LYS 104 3.947 90.832 0.942 1.00 0.00 C ATOM 796 CE LYS 104 3.990 92.058 0.028 1.00 0.00 C ATOM 797 NZ LYS 104 4.194 91.628 -1.372 1.00 0.00 N ATOM 798 C LYS 104 7.896 90.643 3.270 1.00 0.00 C ATOM 799 O LYS 104 8.551 90.144 2.355 1.00 0.00 O ATOM 800 N ASP 105 8.308 91.726 3.946 1.00 0.00 N ATOM 801 CA ASP 105 9.514 92.432 3.626 1.00 0.00 C ATOM 802 CB ASP 105 9.669 93.740 4.432 1.00 0.00 C ATOM 803 CG ASP 105 9.694 93.443 5.926 1.00 0.00 C ATOM 804 OD1 ASP 105 10.671 92.803 6.398 1.00 0.00 O ATOM 805 OD2 ASP 105 8.729 93.860 6.619 1.00 0.00 O ATOM 806 C ASP 105 10.691 91.538 3.856 1.00 0.00 C ATOM 807 O ASP 105 11.686 91.635 3.140 1.00 0.00 O ATOM 808 N ARG 106 10.622 90.671 4.885 1.00 0.00 N ATOM 809 CA ARG 106 11.676 89.759 5.223 1.00 0.00 C ATOM 810 CB ARG 106 11.528 89.131 6.618 1.00 0.00 C ATOM 811 CG ARG 106 11.942 90.084 7.740 1.00 0.00 C ATOM 812 CD ARG 106 13.420 90.484 7.669 1.00 0.00 C ATOM 813 NE ARG 106 14.233 89.236 7.751 1.00 0.00 N ATOM 814 CZ ARG 106 15.493 89.195 7.229 1.00 0.00 C ATOM 815 NH1 ARG 106 16.013 90.291 6.600 1.00 0.00 H ATOM 816 NH2 ARG 106 16.239 88.055 7.334 1.00 0.00 H ATOM 817 C ARG 106 11.776 88.658 4.212 1.00 0.00 C ATOM 818 O ARG 106 12.834 88.047 4.063 1.00 0.00 O ATOM 819 N CYS 107 10.668 88.313 3.533 1.00 0.00 N ATOM 820 CA CYS 107 10.766 87.247 2.580 1.00 0.00 C ATOM 821 CB CYS 107 9.401 86.748 2.055 1.00 0.00 C ATOM 822 SG CYS 107 9.563 85.231 1.066 1.00 0.00 S ATOM 823 C CYS 107 11.579 87.720 1.411 1.00 0.00 C ATOM 824 O CYS 107 11.479 88.871 0.995 1.00 0.00 O ATOM 825 N GLY 108 12.437 86.832 0.866 1.00 0.00 N ATOM 826 CA GLY 108 13.209 87.168 -0.302 1.00 0.00 C ATOM 827 C GLY 108 14.535 87.760 0.080 1.00 0.00 C ATOM 828 O GLY 108 15.364 88.018 -0.793 1.00 0.00 O ATOM 829 N GLU 109 14.778 88.006 1.386 1.00 0.00 N ATOM 830 CA GLU 109 16.029 88.568 1.830 1.00 0.00 C ATOM 831 CB GLU 109 15.978 89.174 3.238 1.00 0.00 C ATOM 832 CG GLU 109 15.713 90.671 3.273 1.00 0.00 C ATOM 833 CD GLU 109 17.102 91.295 3.290 1.00 0.00 C ATOM 834 OE1 GLU 109 18.044 90.660 2.742 1.00 0.00 O ATOM 835 OE2 GLU 109 17.244 92.407 3.861 1.00 0.00 O ATOM 836 C GLU 109 17.121 87.542 1.888 1.00 0.00 C ATOM 837 O GLU 109 16.876 86.362 2.120 1.00 0.00 O ATOM 838 N VAL 110 18.352 87.978 1.546 1.00 0.00 N ATOM 839 CA VAL 110 19.560 87.208 1.689 1.00 0.00 C ATOM 840 CB VAL 110 20.622 87.628 0.721 1.00 0.00 C ATOM 841 CG1 VAL 110 21.884 86.790 0.981 1.00 0.00 C ATOM 842 CG2 VAL 110 20.059 87.472 -0.700 1.00 0.00 C ATOM 843 C VAL 110 20.139 87.310 3.082 1.00 0.00 C ATOM 844 O VAL 110 20.683 86.342 3.613 1.00 0.00 O ATOM 845 N ARG 111 20.064 88.512 3.695 1.00 0.00 N ATOM 846 CA ARG 111 20.705 88.818 4.948 1.00 0.00 C ATOM 847 CB ARG 111 20.781 90.342 5.156 1.00 0.00 C ATOM 848 CG ARG 111 21.432 90.834 6.450 1.00 0.00 C ATOM 849 CD ARG 111 21.353 92.358 6.588 1.00 0.00 C ATOM 850 NE ARG 111 22.004 92.756 7.868 1.00 0.00 N ATOM 851 CZ ARG 111 23.345 93.013 7.906 1.00 0.00 C ATOM 852 NH1 ARG 111 24.098 92.857 6.779 1.00 0.00 H ATOM 853 NH2 ARG 111 23.927 93.438 9.065 1.00 0.00 H ATOM 854 C ARG 111 19.943 88.250 6.104 1.00 0.00 C ATOM 855 O ARG 111 18.731 88.440 6.212 1.00 0.00 O ATOM 856 N ASN 112 20.621 87.503 7.004 1.00 0.00 N ATOM 857 CA ASN 112 19.882 87.121 8.168 1.00 0.00 C ATOM 858 CB ASN 112 18.834 86.002 7.952 1.00 0.00 C ATOM 859 CG ASN 112 19.497 84.713 7.515 1.00 0.00 C ATOM 860 OD1 ASN 112 19.955 84.588 6.382 1.00 0.00 O ATOM 861 ND2 ASN 112 19.548 83.716 8.439 1.00 0.00 N ATOM 862 C ASN 112 20.785 86.768 9.306 1.00 0.00 C ATOM 863 O ASN 112 21.068 85.600 9.572 1.00 0.00 O ATOM 864 N GLU 113 21.261 87.795 10.030 1.00 0.00 N ATOM 865 CA GLU 113 22.024 87.515 11.204 1.00 0.00 C ATOM 866 CB GLU 113 23.067 88.602 11.534 1.00 0.00 C ATOM 867 CG GLU 113 22.474 90.004 11.690 1.00 0.00 C ATOM 868 CD GLU 113 22.130 90.541 10.303 1.00 0.00 C ATOM 869 OE1 GLU 113 22.584 89.934 9.296 1.00 0.00 O ATOM 870 OE2 GLU 113 21.408 91.571 10.233 1.00 0.00 O ATOM 871 C GLU 113 21.023 87.457 12.315 1.00 0.00 C ATOM 872 O GLU 113 19.971 88.089 12.240 1.00 0.00 O ATOM 873 N GLU 114 21.298 86.630 13.340 1.00 0.00 N ATOM 874 CA GLU 114 20.501 86.570 14.537 1.00 0.00 C ATOM 875 CB GLU 114 20.470 87.924 15.268 1.00 0.00 C ATOM 876 CG GLU 114 21.831 88.426 15.749 1.00 0.00 C ATOM 877 CD GLU 114 22.087 87.865 17.135 1.00 0.00 C ATOM 878 OE1 GLU 114 21.200 87.144 17.665 1.00 0.00 O ATOM 879 OE2 GLU 114 23.181 88.158 17.691 1.00 0.00 O ATOM 880 C GLU 114 19.060 86.247 14.242 1.00 0.00 C ATOM 881 O GLU 114 18.191 86.573 15.048 1.00 0.00 O ATOM 882 N ASN 115 18.745 85.576 13.119 1.00 0.00 N ATOM 883 CA ASN 115 17.352 85.305 12.863 1.00 0.00 C ATOM 884 CB ASN 115 16.997 85.125 11.369 1.00 0.00 C ATOM 885 CG ASN 115 16.937 86.465 10.647 1.00 0.00 C ATOM 886 OD1 ASN 115 16.491 86.532 9.504 1.00 0.00 O ATOM 887 ND2 ASN 115 17.388 87.556 11.319 1.00 0.00 N ATOM 888 C ASN 115 16.962 84.017 13.509 1.00 0.00 C ATOM 889 O ASN 115 17.631 82.996 13.362 1.00 0.00 O ATOM 890 N ALA 116 15.841 84.056 14.247 1.00 0.00 N ATOM 891 CA ALA 116 15.267 82.918 14.901 1.00 0.00 C ATOM 892 CB ALA 116 14.078 83.305 15.782 1.00 0.00 C ATOM 893 C ALA 116 14.748 81.963 13.875 1.00 0.00 C ATOM 894 O ALA 116 14.805 80.747 14.052 1.00 0.00 O ATOM 895 N CYS 117 14.167 82.509 12.792 1.00 0.00 N ATOM 896 CA CYS 117 13.563 81.727 11.756 1.00 0.00 C ATOM 897 CB CYS 117 12.035 81.658 11.877 1.00 0.00 C ATOM 898 SG CYS 117 11.510 80.814 13.397 1.00 0.00 S ATOM 899 C CYS 117 13.903 82.428 10.490 1.00 0.00 C ATOM 900 O CYS 117 14.092 83.643 10.489 1.00 0.00 O ATOM 901 N HIS 118 13.949 81.695 9.365 1.00 0.00 N ATOM 902 CA HIS 118 14.551 82.337 8.242 1.00 0.00 C ATOM 903 ND1 HIS 118 17.430 82.192 9.754 1.00 0.00 N ATOM 904 CG HIS 118 16.643 81.280 9.085 1.00 0.00 C ATOM 905 CB HIS 118 15.827 81.591 7.866 1.00 0.00 C ATOM 906 NE2 HIS 118 17.601 80.271 10.861 1.00 0.00 N ATOM 907 CD2 HIS 118 16.761 80.113 9.774 1.00 0.00 C ATOM 908 CE1 HIS 118 17.979 81.536 10.808 1.00 0.00 C ATOM 909 C HIS 118 13.589 82.475 7.094 1.00 0.00 C ATOM 910 O HIS 118 13.017 81.513 6.583 1.00 0.00 O ATOM 911 N CYS 119 13.404 83.748 6.697 1.00 0.00 N ATOM 912 CA CYS 119 12.494 84.298 5.732 1.00 0.00 C ATOM 913 CB CYS 119 12.374 85.817 5.902 1.00 0.00 C ATOM 914 SG CYS 119 11.895 86.243 7.603 1.00 0.00 S ATOM 915 C CYS 119 12.872 84.025 4.305 1.00 0.00 C ATOM 916 O CYS 119 12.031 84.142 3.414 1.00 0.00 O ATOM 917 N SER 120 14.158 83.743 4.042 1.00 0.00 N ATOM 918 CA SER 120 14.672 83.590 2.706 1.00 0.00 C ATOM 919 CB SER 120 16.196 83.765 2.664 1.00 0.00 C ATOM 920 OG SER 120 16.778 83.108 3.778 1.00 0.00 O ATOM 921 C SER 120 14.288 82.287 2.060 1.00 0.00 C ATOM 922 O SER 120 13.966 81.291 2.709 1.00 0.00 O ATOM 923 N GLU 121 14.343 82.289 0.713 1.00 0.00 N ATOM 924 CA GLU 121 13.975 81.189 -0.134 1.00 0.00 C ATOM 925 CB GLU 121 13.978 81.542 -1.632 1.00 0.00 C ATOM 926 CG GLU 121 12.828 82.471 -2.046 1.00 0.00 C ATOM 927 CD GLU 121 11.503 81.724 -1.901 1.00 0.00 C ATOM 928 OE1 GLU 121 11.476 80.691 -1.179 1.00 0.00 O ATOM 929 OE2 GLU 121 10.497 82.181 -2.506 1.00 0.00 O ATOM 930 C GLU 121 14.890 80.030 0.100 1.00 0.00 C ATOM 931 O GLU 121 14.498 78.880 -0.095 1.00 0.00 O ATOM 932 N ASP 122 16.150 80.286 0.501 1.00 0.00 N ATOM 933 CA ASP 122 17.014 79.162 0.703 1.00 0.00 C ATOM 934 CB ASP 122 18.495 79.489 1.000 1.00 0.00 C ATOM 935 CG ASP 122 18.644 80.158 2.351 1.00 0.00 C ATOM 936 OD1 ASP 122 18.017 81.229 2.546 1.00 0.00 O ATOM 937 OD2 ASP 122 19.404 79.621 3.201 1.00 0.00 O ATOM 938 C ASP 122 16.457 78.332 1.817 1.00 0.00 C ATOM 939 O ASP 122 16.656 77.121 1.864 1.00 0.00 O ATOM 940 N CYS 123 15.758 78.987 2.760 1.00 0.00 N ATOM 941 CA CYS 123 15.153 78.377 3.907 1.00 0.00 C ATOM 942 CB CYS 123 14.688 79.465 4.860 1.00 0.00 C ATOM 943 SG CYS 123 16.119 80.562 5.029 1.00 0.00 S ATOM 944 C CYS 123 14.027 77.494 3.475 1.00 0.00 C ATOM 945 O CYS 123 13.687 76.538 4.168 1.00 0.00 O ATOM 946 N LEU 124 13.365 77.832 2.355 1.00 0.00 N ATOM 947 CA LEU 124 12.344 76.983 1.809 1.00 0.00 C ATOM 948 CB LEU 124 11.599 77.642 0.634 1.00 0.00 C ATOM 949 CG LEU 124 10.478 76.771 0.041 1.00 0.00 C ATOM 950 CD1 LEU 124 9.367 76.516 1.073 1.00 0.00 C ATOM 951 CD2 LEU 124 9.944 77.379 -1.265 1.00 0.00 C ATOM 952 C LEU 124 13.001 75.727 1.317 1.00 0.00 C ATOM 953 O LEU 124 12.461 74.627 1.441 1.00 0.00 O ATOM 954 N SER 125 14.197 75.867 0.710 1.00 0.00 N ATOM 955 CA SER 125 14.899 74.725 0.196 1.00 0.00 C ATOM 956 CB SER 125 16.182 75.108 -0.557 1.00 0.00 C ATOM 957 OG SER 125 15.865 75.887 -1.703 1.00 0.00 O ATOM 958 C SER 125 15.297 73.821 1.328 1.00 0.00 C ATOM 959 O SER 125 15.026 72.621 1.288 1.00 0.00 O ATOM 960 N ARG 126 15.973 74.385 2.355 1.00 0.00 N ATOM 961 CA ARG 126 16.479 73.650 3.483 1.00 0.00 C ATOM 962 CB ARG 126 17.618 74.369 4.231 1.00 0.00 C ATOM 963 CG ARG 126 17.342 75.801 4.682 1.00 0.00 C ATOM 964 CD ARG 126 18.634 76.495 5.127 1.00 0.00 C ATOM 965 NE ARG 126 18.365 77.954 5.282 1.00 0.00 N ATOM 966 CZ ARG 126 19.171 78.700 6.092 1.00 0.00 C ATOM 967 NH1 ARG 126 20.159 78.086 6.805 1.00 0.00 H ATOM 968 NH2 ARG 126 18.994 80.050 6.191 1.00 0.00 H ATOM 969 C ARG 126 15.424 73.156 4.437 1.00 0.00 C ATOM 970 O ARG 126 15.570 72.071 4.997 1.00 0.00 O ATOM 971 N GLY 127 14.324 73.912 4.637 1.00 0.00 N ATOM 972 CA GLY 127 13.310 73.498 5.574 1.00 0.00 C ATOM 973 C GLY 127 13.254 74.463 6.734 1.00 0.00 C ATOM 974 O GLY 127 12.345 74.407 7.558 1.00 0.00 O ATOM 975 N ASP 128 14.199 75.417 6.787 1.00 0.00 N ATOM 976 CA ASP 128 14.401 76.402 7.825 1.00 0.00 C ATOM 977 CB ASP 128 15.719 77.177 7.668 1.00 0.00 C ATOM 978 CG ASP 128 16.847 76.245 8.080 1.00 0.00 C ATOM 979 OD1 ASP 128 16.543 75.188 8.692 1.00 0.00 O ATOM 980 OD2 ASP 128 18.025 76.575 7.795 1.00 0.00 O ATOM 981 C ASP 128 13.286 77.418 7.923 1.00 0.00 C ATOM 982 O ASP 128 13.317 78.265 8.814 1.00 0.00 O ATOM 983 N CYS 129 12.304 77.427 7.004 1.00 0.00 N ATOM 984 CA CYS 129 11.297 78.461 6.968 1.00 0.00 C ATOM 985 CB CYS 129 10.197 78.211 5.924 1.00 0.00 C ATOM 986 SG CYS 129 10.827 78.222 4.219 1.00 0.00 S ATOM 987 C CYS 129 10.604 78.676 8.287 1.00 0.00 C ATOM 988 O CYS 129 10.519 77.803 9.148 1.00 0.00 O ATOM 989 N CYS 130 10.102 79.920 8.463 1.00 0.00 N ATOM 990 CA CYS 130 9.375 80.356 9.621 1.00 0.00 C ATOM 991 CB CYS 130 9.088 81.870 9.610 1.00 0.00 C ATOM 992 SG CYS 130 10.593 82.880 9.458 1.00 0.00 S ATOM 993 C CYS 130 8.046 79.670 9.580 1.00 0.00 C ATOM 994 O CYS 130 7.594 79.225 8.528 1.00 0.00 O ATOM 995 N THR 131 7.384 79.575 10.748 1.00 0.00 N ATOM 996 CA THR 131 6.124 78.895 10.833 1.00 0.00 C ATOM 997 CB THR 131 5.566 78.917 12.224 1.00 0.00 C ATOM 998 OG1 THR 131 5.359 80.256 12.653 1.00 0.00 O ATOM 999 CG2 THR 131 6.563 78.214 13.157 1.00 0.00 C ATOM 1000 C THR 131 5.143 79.558 9.914 1.00 0.00 C ATOM 1001 O THR 131 4.441 78.879 9.167 1.00 0.00 O ATOM 1002 N ASN 132 5.062 80.907 9.924 1.00 0.00 N ATOM 1003 CA ASN 132 4.099 81.531 9.055 1.00 0.00 C ATOM 1004 CB ASN 132 3.344 82.703 9.712 1.00 0.00 C ATOM 1005 CG ASN 132 2.360 82.128 10.724 1.00 0.00 C ATOM 1006 OD1 ASN 132 2.166 80.918 10.808 1.00 0.00 O ATOM 1007 ND2 ASN 132 1.696 83.025 11.501 1.00 0.00 N ATOM 1008 C ASN 132 4.798 82.074 7.844 1.00 0.00 C ATOM 1009 O ASN 132 4.460 83.148 7.349 1.00 0.00 O ATOM 1010 N TYR 133 5.765 81.309 7.305 1.00 0.00 N ATOM 1011 CA TYR 133 6.489 81.684 6.124 1.00 0.00 C ATOM 1012 CB TYR 133 7.553 80.615 5.801 1.00 0.00 C ATOM 1013 CG TYR 133 8.305 80.931 4.553 1.00 0.00 C ATOM 1014 CD1 TYR 133 9.427 81.727 4.580 1.00 0.00 C ATOM 1015 CD2 TYR 133 7.894 80.412 3.346 1.00 0.00 C ATOM 1016 CE1 TYR 133 10.121 82.004 3.423 1.00 0.00 C ATOM 1017 CE2 TYR 133 8.582 80.683 2.188 1.00 0.00 C ATOM 1018 CZ TYR 133 9.699 81.479 2.225 1.00 0.00 C ATOM 1019 OH TYR 133 10.407 81.757 1.038 1.00 0.00 H ATOM 1020 C TYR 133 5.517 81.732 4.982 1.00 0.00 C ATOM 1021 O TYR 133 5.449 82.711 4.242 1.00 0.00 O ATOM 1022 N GLN 134 4.708 80.668 4.835 1.00 0.00 N ATOM 1023 CA GLN 134 3.781 80.567 3.743 1.00 0.00 C ATOM 1024 CB GLN 134 3.094 79.194 3.671 1.00 0.00 C ATOM 1025 CG GLN 134 2.205 78.880 4.874 1.00 0.00 C ATOM 1026 CD GLN 134 1.609 77.500 4.643 1.00 0.00 C ATOM 1027 OE1 GLN 134 0.837 76.992 5.454 1.00 0.00 O ATOM 1028 NE2 GLN 134 1.996 76.865 3.504 1.00 0.00 N ATOM 1029 C GLN 134 2.717 81.608 3.871 1.00 0.00 C ATOM 1030 O GLN 134 2.265 82.178 2.878 1.00 0.00 O ATOM 1031 N VAL 135 2.264 81.873 5.106 1.00 0.00 N ATOM 1032 CA VAL 135 1.184 82.795 5.292 1.00 0.00 C ATOM 1033 CB VAL 135 0.798 82.910 6.737 1.00 0.00 C ATOM 1034 CG1 VAL 135 -0.309 83.966 6.874 1.00 0.00 C ATOM 1035 CG2 VAL 135 0.400 81.515 7.248 1.00 0.00 C ATOM 1036 C VAL 135 1.572 84.168 4.824 1.00 0.00 C ATOM 1037 O VAL 135 0.857 84.783 4.032 1.00 0.00 O ATOM 1038 N VAL 136 2.692 84.704 5.351 1.00 0.00 N ATOM 1039 CA VAL 136 3.141 86.036 5.049 1.00 0.00 C ATOM 1040 CB VAL 136 4.082 86.559 6.093 1.00 0.00 C ATOM 1041 CG1 VAL 136 4.514 87.984 5.704 1.00 0.00 C ATOM 1042 CG2 VAL 136 3.387 86.448 7.462 1.00 0.00 C ATOM 1043 C VAL 136 3.833 86.159 3.720 1.00 0.00 C ATOM 1044 O VAL 136 3.642 87.148 3.012 1.00 0.00 O ATOM 1045 N CYS 137 4.769 85.240 3.398 1.00 0.00 N ATOM 1046 CA CYS 137 5.447 85.305 2.128 1.00 0.00 C ATOM 1047 CB CYS 137 6.787 84.542 2.103 1.00 0.00 C ATOM 1048 SG CYS 137 7.656 84.776 0.524 1.00 0.00 S ATOM 1049 C CYS 137 4.604 84.798 0.993 1.00 0.00 C ATOM 1050 O CYS 137 4.467 85.440 -0.049 1.00 0.00 O ATOM 1051 N LYS 138 3.990 83.618 1.189 1.00 0.00 N ATOM 1052 CA LYS 138 3.290 82.920 0.150 1.00 0.00 C ATOM 1053 CB LYS 138 3.112 81.414 0.388 1.00 0.00 C ATOM 1054 CG LYS 138 4.464 80.718 0.226 1.00 0.00 C ATOM 1055 CD LYS 138 5.131 81.099 -1.102 1.00 0.00 C ATOM 1056 CE LYS 138 6.610 80.719 -1.200 1.00 0.00 C ATOM 1057 NZ LYS 138 7.228 81.389 -2.369 1.00 0.00 N ATOM 1058 C LYS 138 2.010 83.554 -0.261 1.00 0.00 C ATOM 1059 O LYS 138 1.529 83.224 -1.336 1.00 0.00 O ATOM 1060 N GLY 139 1.366 84.400 0.569 1.00 0.00 N ATOM 1061 CA GLY 139 0.155 84.999 0.075 1.00 0.00 C ATOM 1062 C GLY 139 0.517 85.765 -1.159 1.00 0.00 C ATOM 1063 O GLY 139 1.076 86.860 -1.097 1.00 0.00 O ATOM 1064 N GLU 140 0.158 85.229 -2.340 1.00 0.00 N ATOM 1065 CA GLU 140 0.598 85.894 -3.521 1.00 0.00 C ATOM 1066 CB GLU 140 1.089 84.921 -4.599 1.00 0.00 C ATOM 1067 CG GLU 140 2.405 84.291 -4.137 1.00 0.00 C ATOM 1068 CD GLU 140 2.775 83.138 -5.044 1.00 0.00 C ATOM 1069 OE1 GLU 140 2.153 83.016 -6.131 1.00 0.00 O ATOM 1070 OE2 GLU 140 3.690 82.364 -4.651 1.00 0.00 O ATOM 1071 C GLU 140 -0.504 86.765 -4.012 1.00 0.00 C ATOM 1072 O GLU 140 -1.436 86.325 -4.686 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 51.85 64.8 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 60.14 58.1 62 100.0 62 ARMSMC BURIED . . . . . . . . 21.74 80.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.40 59.0 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 80.27 58.3 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 78.26 57.7 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 81.63 61.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.68 47.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 59.02 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 58.11 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 102.99 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.41 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 68.59 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 70.33 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 93.90 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.01 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 96.01 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 79.43 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 122.63 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.20 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.20 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0488 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.49 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.21 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.37 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.68 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.35 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.89 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.04 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.88 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.90 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.73 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.80 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.57 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.585 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 1.865 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 0.897 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.714 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.017 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 0.989 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.594 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 3.670 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 3.742 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 3.281 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.561 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.756 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 2.116 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 19 37 39 42 45 45 45 DISTCA CA (P) 42.22 82.22 86.67 93.33 100.00 45 DISTCA CA (RMS) 0.65 1.09 1.16 1.54 2.20 DISTCA ALL (N) 98 213 252 299 334 345 345 DISTALL ALL (P) 28.41 61.74 73.04 86.67 96.81 345 DISTALL ALL (RMS) 0.71 1.16 1.43 2.02 2.94 DISTALL END of the results output