####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 26 ( 396), selected 26 , name T0543TS055_1_2-D4 # Molecule2: number of CA atoms 312 ( 2539), selected 26 , name T0543-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS055_1_2-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 549 - 565 4.82 17.87 LONGEST_CONTINUOUS_SEGMENT: 17 550 - 566 4.49 18.88 LCS_AVERAGE: 5.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 551 - 557 1.77 21.49 LONGEST_CONTINUOUS_SEGMENT: 7 556 - 562 1.87 16.24 LCS_AVERAGE: 1.92 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 551 - 555 0.92 25.92 LCS_AVERAGE: 1.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 26 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT P 541 P 541 3 4 13 3 3 3 4 5 6 8 9 9 11 11 12 12 12 12 12 12 12 12 13 LCS_GDT T 542 T 542 3 5 13 3 3 4 5 7 9 9 10 11 11 11 12 12 12 12 12 12 12 12 13 LCS_GDT M 543 M 543 3 5 13 3 3 4 5 7 9 9 10 11 11 11 12 12 12 12 12 12 12 13 13 LCS_GDT P 544 P 544 3 5 13 3 3 4 5 7 9 9 10 11 11 11 12 12 12 12 12 12 12 13 13 LCS_GDT D 545 D 545 3 6 13 3 3 4 5 7 9 9 10 11 11 11 12 12 12 12 12 12 12 13 13 LCS_GDT E 546 E 546 3 6 13 3 3 4 4 5 6 7 10 11 11 11 12 12 12 12 12 14 15 18 20 LCS_GDT V 547 V 547 4 6 13 3 4 4 5 7 9 9 10 11 11 11 12 12 12 12 13 16 16 19 20 LCS_GDT S 548 S 548 4 6 13 3 4 4 5 6 9 9 10 11 11 11 12 12 12 14 15 18 18 19 20 LCS_GDT R 549 R 549 4 6 17 3 4 4 5 7 9 9 10 11 11 11 12 14 15 16 17 18 18 19 20 LCS_GDT P 550 P 550 4 6 17 3 4 4 5 7 9 9 10 11 13 14 14 15 15 16 17 18 18 19 20 LCS_GDT N 551 N 551 5 7 17 3 4 5 5 7 9 10 10 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT Y 552 Y 552 5 7 17 4 4 5 5 6 7 8 9 12 13 13 15 15 15 16 17 17 18 18 20 LCS_GDT P 553 P 553 5 7 17 4 4 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT G 554 G 554 5 7 17 4 4 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT I 555 I 555 5 7 17 4 5 5 7 7 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT M 556 M 556 4 7 17 1 3 4 5 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT Y 557 Y 557 4 7 17 0 3 4 5 6 8 9 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT L 558 L 558 3 7 17 1 3 4 5 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT Q 559 Q 559 4 7 17 4 5 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT S 560 S 560 4 7 17 4 5 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT E 561 E 561 4 7 17 4 5 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT F 562 F 562 4 7 17 4 5 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT D 563 D 563 3 5 17 3 3 4 4 5 7 8 10 10 12 13 13 14 15 16 17 18 18 19 20 LCS_GDT L 564 L 564 3 4 17 3 3 4 5 7 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT G 565 G 565 3 4 17 3 3 3 4 4 4 4 8 12 13 14 15 15 15 16 17 18 18 19 20 LCS_GDT C 566 C 566 3 4 17 3 3 3 4 5 5 6 9 10 11 12 15 15 15 16 17 18 18 19 20 LCS_AVERAGE LCS_A: 2.73 ( 1.21 1.92 5.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 7 8 10 10 11 12 13 14 15 15 15 16 17 18 18 19 20 GDT PERCENT_AT 1.28 1.60 1.60 2.24 2.56 3.21 3.21 3.53 3.85 4.17 4.49 4.81 4.81 4.81 5.13 5.45 5.77 5.77 6.09 6.41 GDT RMS_LOCAL 0.09 0.51 0.51 1.28 2.03 2.27 2.27 2.58 2.85 3.16 3.61 3.82 3.82 3.82 4.17 4.49 5.62 5.04 6.40 7.09 GDT RMS_ALL_AT 16.09 17.13 17.13 18.19 19.11 19.13 18.67 19.10 19.21 18.97 18.42 19.57 19.57 19.57 19.52 18.88 16.52 17.99 15.43 14.55 # Checking swapping # possible swapping detected: Y 557 Y 557 # possible swapping detected: D 563 D 563 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA P 541 P 541 48.668 0 0.304 0.375 50.316 0.000 0.000 LGA T 542 T 542 42.293 0 0.668 1.417 44.662 0.000 0.000 LGA M 543 M 543 37.353 0 0.586 0.891 39.295 0.000 0.000 LGA P 544 P 544 33.378 0 0.224 0.293 35.206 0.000 0.000 LGA D 545 D 545 28.428 0 0.366 1.040 30.509 0.000 0.000 LGA E 546 E 546 22.753 0 0.458 0.958 24.541 0.000 0.000 LGA V 547 V 547 22.224 0 0.132 0.152 25.664 0.000 0.000 LGA S 548 S 548 19.127 0 0.161 0.640 20.874 0.000 0.000 LGA R 549 R 549 14.573 0 0.156 1.552 18.466 0.000 0.000 LGA P 550 P 550 10.326 0 0.156 0.280 14.155 0.476 0.272 LGA N 551 N 551 6.858 0 0.376 0.455 9.000 11.786 8.869 LGA Y 552 Y 552 7.529 0 0.509 1.163 17.049 13.929 4.643 LGA P 553 P 553 2.598 0 0.149 0.228 4.623 48.690 48.912 LGA G 554 G 554 2.238 0 0.054 0.054 2.428 68.929 68.929 LGA I 555 I 555 2.644 0 0.030 0.201 9.141 67.143 41.310 LGA M 556 M 556 2.214 0 0.598 0.962 7.549 60.119 42.024 LGA Y 557 Y 557 4.346 0 0.210 1.197 16.849 54.167 19.286 LGA L 558 L 558 2.237 0 0.096 1.197 8.577 63.333 37.440 LGA Q 559 Q 559 2.780 0 0.372 1.016 11.240 73.214 37.672 LGA S 560 S 560 2.063 0 0.192 0.658 4.800 70.952 60.873 LGA E 561 E 561 1.602 0 0.526 1.280 7.627 67.143 47.407 LGA F 562 F 562 1.954 0 0.142 1.194 8.688 64.167 40.346 LGA D 563 D 563 6.340 0 0.165 1.007 11.426 22.738 11.548 LGA L 564 L 564 2.706 0 0.204 0.173 4.049 50.357 53.988 LGA G 565 G 565 5.237 0 0.270 0.270 6.013 25.476 25.476 LGA C 566 C 566 8.611 0 0.301 0.844 11.137 5.595 3.730 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 26 104 104 100.00 205 205 100.00 312 SUMMARY(RMSD_GDC): 11.673 11.583 12.194 2.462 1.772 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 26 312 4.0 11 2.58 3.205 2.968 0.410 LGA_LOCAL RMSD: 2.580 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.105 Number of assigned atoms: 26 Std_ASGN_ATOMS RMSD: 11.673 Standard rmsd on all 26 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.388596 * X + -0.760942 * Y + -0.519577 * Z + 33.324966 Y_new = -0.152050 * X + 0.503205 * Y + -0.850685 * Z + 32.824337 Z_new = 0.908776 * X + 0.409575 * Y + 0.079842 * Z + -2.712053 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.372968 -1.140342 1.378272 [DEG: -21.3695 -65.3368 78.9692 ] ZXZ: -0.548304 1.490869 1.147370 [DEG: -31.4155 85.4205 65.7395 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS055_1_2-D4 REMARK 2: T0543-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS055_1_2-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 26 312 4.0 11 2.58 2.968 11.67 REMARK ---------------------------------------------------------- MOLECULE T0543TS055_1_2-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 2 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 2RH6_A ATOM 6161 N PRO 541 -30.703 4.309 39.425 1.00 0.00 N ATOM 6162 CA PRO 541 -31.268 4.352 38.103 1.00 0.00 C ATOM 6163 C PRO 541 -30.517 5.077 37.026 1.00 0.00 C ATOM 6164 O PRO 541 -29.402 4.660 36.775 1.00 0.00 O ATOM 6165 CB PRO 541 -32.626 5.016 38.353 1.00 0.00 C ATOM 6166 CG PRO 541 -32.350 6.038 39.403 1.00 0.00 C ATOM 6167 CD PRO 541 -31.296 5.429 40.288 1.00 0.00 C ATOM 6168 HA PRO 541 -31.135 3.408 37.553 1.00 0.00 H ATOM 6169 HB2 PRO 541 -33.021 5.481 37.438 1.00 0.00 H ATOM 6170 HB3 PRO 541 -33.375 4.287 38.695 1.00 0.00 H ATOM 6171 HG2 PRO 541 -31.995 6.980 38.958 1.00 0.00 H ATOM 6172 HG3 PRO 541 -33.258 6.275 39.975 1.00 0.00 H ATOM 6173 HD2 PRO 541 -30.526 6.156 40.581 1.00 0.00 H ATOM 6174 HD3 PRO 541 -31.720 5.018 41.216 1.00 0.00 H ATOM 6175 N THR 542 -31.166 6.064 36.338 1.00 0.00 N ATOM 6176 CA THR 542 -30.980 6.685 35.022 1.00 0.00 C ATOM 6177 C THR 542 -31.169 8.183 34.774 1.00 0.00 C ATOM 6178 O THR 542 -30.544 8.717 33.874 1.00 0.00 O ATOM 6179 CB THR 542 -31.905 5.968 34.021 1.00 0.00 C ATOM 6180 OG1 THR 542 -31.413 4.644 33.776 1.00 0.00 O ATOM 6181 CG2 THR 542 -31.965 6.734 32.709 1.00 0.00 C ATOM 6182 H THR 542 -31.920 6.383 36.931 1.00 0.00 H ATOM 6183 HA THR 542 -29.916 6.759 34.797 1.00 0.00 H ATOM 6184 HB THR 542 -32.906 5.901 34.448 1.00 0.00 H ATOM 6185 HG1 THR 542 -32.027 4.003 34.142 1.00 0.00 H ATOM 6186 HG21 THR 542 -32.624 6.213 32.014 1.00 0.00 H ATOM 6187 HG22 THR 542 -32.350 7.738 32.890 1.00 0.00 H ATOM 6188 HG23 THR 542 -30.965 6.800 32.281 1.00 0.00 H ATOM 6189 N MET 543 -32.041 8.943 35.441 1.00 0.00 N ATOM 6190 CA MET 543 -32.395 10.265 34.987 1.00 0.00 C ATOM 6191 C MET 543 -31.281 11.254 34.711 1.00 0.00 C ATOM 6192 O MET 543 -31.244 11.663 33.557 1.00 0.00 O ATOM 6193 CB MET 543 -33.344 10.877 36.016 1.00 0.00 C ATOM 6194 CG MET 543 -33.870 12.256 35.646 1.00 0.00 C ATOM 6195 SD MET 543 -34.908 12.974 36.935 1.00 0.00 S ATOM 6196 CE MET 543 -33.666 13.524 38.101 1.00 0.00 C ATOM 6197 H MET 543 -32.463 8.583 36.286 1.00 0.00 H ATOM 6198 HA MET 543 -32.818 10.213 33.984 1.00 0.00 H ATOM 6199 HB2 MET 543 -34.179 10.187 36.127 1.00 0.00 H ATOM 6200 HB3 MET 543 -32.796 10.939 36.957 1.00 0.00 H ATOM 6201 HG2 MET 543 -33.017 12.909 35.468 1.00 0.00 H ATOM 6202 HG3 MET 543 -34.453 12.161 34.729 1.00 0.00 H ATOM 6203 HE1 MET 543 -34.153 13.992 38.957 1.00 0.00 H ATOM 6204 HE2 MET 543 -33.080 12.669 38.439 1.00 0.00 H ATOM 6205 HE3 MET 543 -33.008 14.248 37.617 1.00 0.00 H ATOM 6206 N PRO 544 -30.531 11.917 35.555 1.00 0.00 N ATOM 6207 CA PRO 544 -29.471 12.636 34.827 1.00 0.00 C ATOM 6208 C PRO 544 -28.217 12.017 34.147 1.00 0.00 C ATOM 6209 O PRO 544 -27.453 11.441 34.911 1.00 0.00 O ATOM 6210 CB PRO 544 -29.019 13.597 35.931 1.00 0.00 C ATOM 6211 CG PRO 544 -29.094 12.787 37.181 1.00 0.00 C ATOM 6212 CD PRO 544 -30.293 11.894 37.006 1.00 0.00 C ATOM 6213 HA PRO 544 -29.823 13.068 33.878 1.00 0.00 H ATOM 6214 HB2 PRO 544 -27.996 13.962 35.755 1.00 0.00 H ATOM 6215 HB3 PRO 544 -29.671 14.481 35.989 1.00 0.00 H ATOM 6216 HG2 PRO 544 -28.178 12.196 37.327 1.00 0.00 H ATOM 6217 HG3 PRO 544 -29.206 13.431 38.065 1.00 0.00 H ATOM 6218 HD2 PRO 544 -30.106 10.871 37.361 1.00 0.00 H ATOM 6219 HD3 PRO 544 -31.173 12.267 37.551 1.00 0.00 H ATOM 6220 N ASP 545 -27.890 12.157 32.837 1.00 0.00 N ATOM 6221 CA ASP 545 -26.682 11.791 32.088 1.00 0.00 C ATOM 6222 C ASP 545 -26.750 12.184 30.573 1.00 0.00 C ATOM 6223 O ASP 545 -26.919 11.352 29.684 1.00 0.00 O ATOM 6224 CB ASP 545 -26.430 10.288 32.230 1.00 0.00 C ATOM 6225 CG ASP 545 -25.105 9.815 31.647 1.00 0.00 C ATOM 6226 OD1 ASP 545 -24.413 10.618 31.068 1.00 0.00 O ATOM 6227 OD2 ASP 545 -24.724 8.701 31.919 1.00 0.00 O ATOM 6228 H ASP 545 -28.658 12.596 32.349 1.00 0.00 H ATOM 6229 HA ASP 545 -25.827 12.349 32.471 1.00 0.00 H ATOM 6230 HB2 ASP 545 -26.524 9.927 33.255 1.00 0.00 H ATOM 6231 HB3 ASP 545 -27.251 9.899 31.629 1.00 0.00 H ATOM 6232 N GLU 546 -26.508 13.483 30.289 1.00 0.00 N ATOM 6233 CA GLU 546 -26.214 14.463 29.287 1.00 0.00 C ATOM 6234 C GLU 546 -25.461 15.736 29.898 1.00 0.00 C ATOM 6235 O GLU 546 -24.235 15.697 29.984 1.00 0.00 O ATOM 6236 CB GLU 546 -27.518 14.866 28.595 1.00 0.00 C ATOM 6237 CG GLU 546 -27.987 13.894 27.521 1.00 0.00 C ATOM 6238 CD GLU 546 -29.334 14.285 26.981 1.00 0.00 C ATOM 6239 OE1 GLU 546 -29.824 15.323 27.353 1.00 0.00 O ATOM 6240 OE2 GLU 546 -29.823 13.603 26.111 1.00 0.00 O ATOM 6241 H GLU 546 -26.596 13.776 31.252 1.00 0.00 H ATOM 6242 HA GLU 546 -25.423 14.098 28.632 1.00 0.00 H ATOM 6243 HB2 GLU 546 -28.279 14.943 29.371 1.00 0.00 H ATOM 6244 HB3 GLU 546 -27.353 15.848 28.149 1.00 0.00 H ATOM 6245 HG2 GLU 546 -27.283 13.786 26.697 1.00 0.00 H ATOM 6246 HG3 GLU 546 -28.070 12.947 28.053 1.00 0.00 H ATOM 6247 N VAL 547 -26.108 16.887 30.325 1.00 0.00 N ATOM 6248 CA VAL 547 -25.639 18.301 30.485 1.00 0.00 C ATOM 6249 C VAL 547 -24.841 18.927 31.692 1.00 0.00 C ATOM 6250 O VAL 547 -23.878 19.640 31.416 1.00 0.00 O ATOM 6251 CB VAL 547 -26.889 19.188 30.329 1.00 0.00 C ATOM 6252 CG1 VAL 547 -26.543 20.646 30.592 1.00 0.00 C ATOM 6253 CG2 VAL 547 -27.487 19.025 28.939 1.00 0.00 C ATOM 6254 H VAL 547 -27.064 16.657 30.553 1.00 0.00 H ATOM 6255 HA VAL 547 -24.837 18.535 29.785 1.00 0.00 H ATOM 6256 HB VAL 547 -27.647 18.860 31.040 1.00 0.00 H ATOM 6257 HG11 VAL 547 -27.438 21.258 30.477 1.00 0.00 H ATOM 6258 HG12 VAL 547 -26.159 20.751 31.606 1.00 0.00 H ATOM 6259 HG13 VAL 547 -25.786 20.974 29.879 1.00 0.00 H ATOM 6260 HG21 VAL 547 -28.369 19.659 28.847 1.00 0.00 H ATOM 6261 HG22 VAL 547 -26.750 19.316 28.191 1.00 0.00 H ATOM 6262 HG23 VAL 547 -27.771 17.984 28.784 1.00 0.00 H ATOM 6263 N SER 548 -25.144 18.726 33.018 1.00 0.00 N ATOM 6264 CA SER 548 -24.743 19.564 34.192 1.00 0.00 C ATOM 6265 C SER 548 -23.248 19.780 34.481 1.00 0.00 C ATOM 6266 O SER 548 -22.378 19.141 33.895 1.00 0.00 O ATOM 6267 CB SER 548 -25.380 18.973 35.435 1.00 0.00 C ATOM 6268 OG SER 548 -24.876 17.699 35.730 1.00 0.00 O ATOM 6269 H SER 548 -25.707 17.901 33.171 1.00 0.00 H ATOM 6270 HA SER 548 -25.228 20.541 34.212 1.00 0.00 H ATOM 6271 HB2 SER 548 -25.180 19.636 36.277 1.00 0.00 H ATOM 6272 HB3 SER 548 -26.455 18.902 35.278 1.00 0.00 H ATOM 6273 HG SER 548 -25.303 17.362 36.520 1.00 0.00 H ATOM 6274 N ARG 549 -22.927 20.791 35.371 1.00 0.00 N ATOM 6275 CA ARG 549 -21.584 21.144 35.857 1.00 0.00 C ATOM 6276 C ARG 549 -21.504 21.014 37.347 1.00 0.00 C ATOM 6277 O ARG 549 -22.575 20.834 37.923 1.00 0.00 O ATOM 6278 CB ARG 549 -21.138 22.528 35.407 1.00 0.00 C ATOM 6279 CG ARG 549 -21.813 23.684 36.129 1.00 0.00 C ATOM 6280 CD ARG 549 -23.239 23.882 35.766 1.00 0.00 C ATOM 6281 NE ARG 549 -23.466 24.206 34.367 1.00 0.00 N ATOM 6282 CZ ARG 549 -24.612 23.961 33.701 1.00 0.00 C ATOM 6283 NH1 ARG 549 -25.621 23.357 34.288 1.00 0.00 H ATOM 6284 NH2 ARG 549 -24.686 24.322 32.432 1.00 0.00 H ATOM 6285 H ARG 549 -23.724 21.319 35.697 1.00 0.00 H ATOM 6286 HA ARG 549 -20.832 20.575 35.309 1.00 0.00 H ATOM 6287 HB2 ARG 549 -20.062 22.582 35.568 1.00 0.00 H ATOM 6288 HB3 ARG 549 -21.349 22.598 34.340 1.00 0.00 H ATOM 6289 HG2 ARG 549 -21.761 23.500 37.202 1.00 0.00 H ATOM 6290 HG3 ARG 549 -21.275 24.601 35.890 1.00 0.00 H ATOM 6291 HD2 ARG 549 -23.791 22.967 35.983 1.00 0.00 H ATOM 6292 HD3 ARG 549 -23.646 24.699 36.360 1.00 0.00 H ATOM 6293 HE ARG 549 -22.847 24.642 33.698 1.00 0.00 H ATOM 6294 HH11 ARG 549 -25.541 23.070 35.253 1.00 0.00 H ATOM 6295 HH12 ARG 549 -26.470 23.180 33.771 1.00 0.00 H ATOM 6296 HH21 ARG 549 -23.894 24.770 31.990 1.00 0.00 H ATOM 6297 HH22 ARG 549 -25.530 24.149 31.909 1.00 0.00 H ATOM 6298 N PRO 550 -20.415 21.144 38.120 1.00 0.00 N ATOM 6299 CA PRO 550 -19.006 21.412 37.774 1.00 0.00 C ATOM 6300 C PRO 550 -18.040 20.418 37.163 1.00 0.00 C ATOM 6301 O PRO 550 -18.423 19.313 36.789 1.00 0.00 O ATOM 6302 CB PRO 550 -18.461 21.845 39.139 1.00 0.00 C ATOM 6303 CG PRO 550 -19.302 21.109 40.126 1.00 0.00 C ATOM 6304 CD PRO 550 -20.689 21.103 39.541 1.00 0.00 C ATOM 6305 HA PRO 550 -18.898 22.129 36.949 1.00 0.00 H ATOM 6306 HB2 PRO 550 -17.397 21.583 39.250 1.00 0.00 H ATOM 6307 HB3 PRO 550 -18.541 22.933 39.279 1.00 0.00 H ATOM 6308 HG2 PRO 550 -18.933 20.084 40.279 1.00 0.00 H ATOM 6309 HG3 PRO 550 -19.288 21.606 41.108 1.00 0.00 H ATOM 6310 HD2 PRO 550 -21.254 20.202 39.820 1.00 0.00 H ATOM 6311 HD3 PRO 550 -21.282 21.969 39.870 1.00 0.00 H ATOM 6312 N ASN 551 -16.744 20.836 37.116 1.00 0.00 N ATOM 6313 CA ASN 551 -15.644 20.247 36.385 1.00 0.00 C ATOM 6314 C ASN 551 -15.043 19.269 37.298 1.00 0.00 C ATOM 6315 O ASN 551 -13.937 19.402 37.807 1.00 0.00 O ATOM 6316 CB ASN 551 -14.614 21.259 35.915 1.00 0.00 C ATOM 6317 CG ASN 551 -15.195 22.377 35.095 1.00 0.00 C ATOM 6318 OD1 ASN 551 -15.330 22.269 33.871 1.00 0.00 O ATOM 6319 ND2 ASN 551 -15.463 23.478 35.749 1.00 0.00 N ATOM 6320 H ASN 551 -16.578 21.661 37.674 1.00 0.00 H ATOM 6321 HA ASN 551 -15.992 19.894 35.413 1.00 0.00 H ATOM 6322 HB2 ASN 551 -13.878 21.668 36.607 1.00 0.00 H ATOM 6323 HB3 ASN 551 -14.128 20.547 35.246 1.00 0.00 H ATOM 6324 HD21 ASN 551 -15.852 24.262 35.268 1.00 0.00 H ATOM 6325 HD22 ASN 551 -15.279 23.533 36.731 1.00 0.00 H ATOM 6326 N TYR 552 -15.831 18.242 37.501 1.00 0.00 N ATOM 6327 CA TYR 552 -15.622 17.095 38.280 1.00 0.00 C ATOM 6328 C TYR 552 -16.279 16.277 37.266 1.00 0.00 C ATOM 6329 O TYR 552 -17.118 16.863 36.601 1.00 0.00 O ATOM 6330 CB TYR 552 -16.291 17.083 39.656 1.00 0.00 C ATOM 6331 CG TYR 552 -15.713 18.088 40.628 1.00 0.00 C ATOM 6332 CD1 TYR 552 -16.157 19.403 40.642 1.00 0.00 C ATOM 6333 CD2 TYR 552 -14.726 17.720 41.528 1.00 0.00 C ATOM 6334 CE1 TYR 552 -15.633 20.326 41.526 1.00 0.00 C ATOM 6335 CE2 TYR 552 -14.195 18.634 42.418 1.00 0.00 C ATOM 6336 CZ TYR 552 -14.651 19.936 42.414 1.00 0.00 C ATOM 6337 OH TYR 552 -14.125 20.850 43.298 1.00 0.00 H ATOM 6338 H TYR 552 -16.701 18.344 36.999 1.00 0.00 H ATOM 6339 HA TYR 552 -14.597 17.083 38.653 1.00 0.00 H ATOM 6340 HB2 TYR 552 -17.350 17.295 39.502 1.00 0.00 H ATOM 6341 HB3 TYR 552 -16.176 16.079 40.063 1.00 0.00 H ATOM 6342 HD1 TYR 552 -16.934 19.703 39.938 1.00 0.00 H ATOM 6343 HD2 TYR 552 -14.369 16.690 41.527 1.00 0.00 H ATOM 6344 HE1 TYR 552 -15.992 21.354 41.526 1.00 0.00 H ATOM 6345 HE2 TYR 552 -13.418 18.325 43.118 1.00 0.00 H ATOM 6346 HH TYR 552 -13.451 20.474 43.870 1.00 0.00 H ATOM 6347 N PRO 553 -15.999 15.050 37.066 1.00 0.00 N ATOM 6348 CA PRO 553 -16.671 14.328 36.014 1.00 0.00 C ATOM 6349 C PRO 553 -18.012 13.772 36.425 1.00 0.00 C ATOM 6350 O PRO 553 -18.429 14.071 37.534 1.00 0.00 O ATOM 6351 CB PRO 553 -15.683 13.214 35.658 1.00 0.00 C ATOM 6352 CG PRO 553 -15.024 12.875 36.951 1.00 0.00 C ATOM 6353 CD PRO 553 -14.947 14.172 37.712 1.00 0.00 C ATOM 6354 HA PRO 553 -16.911 14.963 35.147 1.00 0.00 H ATOM 6355 HB2 PRO 553 -16.196 12.339 35.231 1.00 0.00 H ATOM 6356 HB3 PRO 553 -14.947 13.550 34.912 1.00 0.00 H ATOM 6357 HG2 PRO 553 -15.602 12.123 37.508 1.00 0.00 H ATOM 6358 HG3 PRO 553 -14.021 12.452 36.788 1.00 0.00 H ATOM 6359 HD2 PRO 553 -15.156 14.039 38.784 1.00 0.00 H ATOM 6360 HD3 PRO 553 -13.956 14.642 37.634 1.00 0.00 H ATOM 6361 N GLY 554 -18.745 13.024 35.553 1.00 0.00 N ATOM 6362 CA GLY 554 -19.994 12.409 36.020 1.00 0.00 C ATOM 6363 C GLY 554 -20.203 10.995 35.454 1.00 0.00 C ATOM 6364 O GLY 554 -19.453 10.532 34.599 1.00 0.00 O ATOM 6365 H GLY 554 -18.454 12.882 34.596 1.00 0.00 H ATOM 6366 HA2 GLY 554 -19.973 12.343 37.108 1.00 0.00 H ATOM 6367 HA3 GLY 554 -20.834 13.029 35.710 1.00 0.00 H ATOM 6368 N ILE 555 -21.081 10.241 36.198 1.00 0.00 N ATOM 6369 CA ILE 555 -21.736 8.941 36.121 1.00 0.00 C ATOM 6370 C ILE 555 -21.608 8.191 37.442 1.00 0.00 C ATOM 6371 O ILE 555 -21.057 7.098 37.521 1.00 0.00 O ATOM 6372 CB ILE 555 -21.151 8.076 34.989 1.00 0.00 C ATOM 6373 CG1 ILE 555 -21.593 8.613 33.625 1.00 0.00 C ATOM 6374 CG2 ILE 555 -21.574 6.625 35.156 1.00 0.00 C ATOM 6375 CD1 ILE 555 -20.862 7.990 32.458 1.00 0.00 C ATOM 6376 H ILE 555 -21.262 10.837 36.992 1.00 0.00 H ATOM 6377 HA ILE 555 -22.807 9.059 35.968 1.00 0.00 H ATOM 6378 HB ILE 555 -20.064 8.144 35.016 1.00 0.00 H ATOM 6379 HG12 ILE 555 -22.661 8.419 33.531 1.00 0.00 H ATOM 6380 HG13 ILE 555 -21.419 9.689 33.629 1.00 0.00 H ATOM 6381 HG21 ILE 555 -21.152 6.028 34.348 1.00 0.00 H ATOM 6382 HG22 ILE 555 -21.210 6.248 36.112 1.00 0.00 H ATOM 6383 HG23 ILE 555 -22.661 6.556 35.129 1.00 0.00 H ATOM 6384 HD11 ILE 555 -21.230 8.420 31.526 1.00 0.00 H ATOM 6385 HD12 ILE 555 -19.793 8.185 32.551 1.00 0.00 H ATOM 6386 HD13 ILE 555 -21.035 6.914 32.451 1.00 0.00 H ATOM 6387 N MET 556 -22.151 8.677 38.567 1.00 0.00 N ATOM 6388 CA MET 556 -22.192 7.757 39.656 1.00 0.00 C ATOM 6389 C MET 556 -23.291 8.090 40.595 1.00 0.00 C ATOM 6390 O MET 556 -23.439 9.243 40.992 1.00 0.00 O ATOM 6391 CB MET 556 -20.855 7.746 40.394 1.00 0.00 C ATOM 6392 CG MET 556 -20.827 6.865 41.635 1.00 0.00 C ATOM 6393 SD MET 556 -19.228 6.891 42.471 1.00 0.00 S ATOM 6394 CE MET 556 -19.257 8.525 43.203 1.00 0.00 C ATOM 6395 H MET 556 -22.519 9.608 38.696 1.00 0.00 H ATOM 6396 HA MET 556 -22.305 6.740 39.280 1.00 0.00 H ATOM 6397 HB2 MET 556 -20.105 7.400 39.685 1.00 0.00 H ATOM 6398 HB3 MET 556 -20.640 8.778 40.676 1.00 0.00 H ATOM 6399 HG2 MET 556 -21.595 7.220 42.321 1.00 0.00 H ATOM 6400 HG3 MET 556 -21.054 5.843 41.331 1.00 0.00 H ATOM 6401 HE1 MET 556 -18.333 8.693 43.757 1.00 0.00 H ATOM 6402 HE2 MET 556 -19.351 9.275 42.417 1.00 0.00 H ATOM 6403 HE3 MET 556 -20.106 8.603 43.884 1.00 0.00 H ATOM 6404 N TYR 557 -24.019 7.041 41.027 1.00 0.00 N ATOM 6405 CA TYR 557 -24.996 7.085 42.083 1.00 0.00 C ATOM 6406 C TYR 557 -24.214 7.298 43.326 1.00 0.00 C ATOM 6407 O TYR 557 -23.475 6.411 43.747 1.00 0.00 O ATOM 6408 CB TYR 557 -25.830 5.804 42.162 1.00 0.00 C ATOM 6409 CG TYR 557 -27.007 5.896 43.107 1.00 0.00 C ATOM 6410 CD1 TYR 557 -28.267 6.246 42.643 1.00 0.00 C ATOM 6411 CD2 TYR 557 -26.856 5.631 44.460 1.00 0.00 C ATOM 6412 CE1 TYR 557 -29.347 6.331 43.501 1.00 0.00 C ATOM 6413 CE2 TYR 557 -27.928 5.713 45.328 1.00 0.00 C ATOM 6414 CZ TYR 557 -29.173 6.064 44.845 1.00 0.00 C ATOM 6415 OH TYR 557 -30.243 6.146 45.704 1.00 0.00 H ATOM 6416 H TYR 557 -23.845 6.165 40.554 1.00 0.00 H ATOM 6417 HA TYR 557 -25.731 7.864 41.875 1.00 0.00 H ATOM 6418 HB2 TYR 557 -26.188 5.590 41.155 1.00 0.00 H ATOM 6419 HB3 TYR 557 -25.163 5.007 42.489 1.00 0.00 H ATOM 6420 HD1 TYR 557 -28.398 6.455 41.581 1.00 0.00 H ATOM 6421 HD2 TYR 557 -25.871 5.355 44.835 1.00 0.00 H ATOM 6422 HE1 TYR 557 -30.330 6.607 43.123 1.00 0.00 H ATOM 6423 HE2 TYR 557 -27.788 5.502 46.388 1.00 0.00 H ATOM 6424 HH TYR 557 -30.013 5.940 46.612 1.00 0.00 H ATOM 6425 N LEU 558 -24.318 8.513 43.894 1.00 0.00 N ATOM 6426 CA LEU 558 -23.530 8.826 45.046 1.00 0.00 C ATOM 6427 C LEU 558 -23.882 7.854 46.106 1.00 0.00 C ATOM 6428 O LEU 558 -25.031 7.755 46.529 1.00 0.00 O ATOM 6429 CB LEU 558 -23.772 10.266 45.516 1.00 0.00 C ATOM 6430 CG LEU 558 -22.783 10.783 46.569 1.00 0.00 C ATOM 6431 CD1 LEU 558 -21.385 10.877 45.971 1.00 0.00 C ATOM 6432 CD2 LEU 558 -23.245 12.141 47.077 1.00 0.00 C ATOM 6433 H LEU 558 -24.944 9.212 43.522 1.00 0.00 H ATOM 6434 HA LEU 558 -22.472 8.745 44.798 1.00 0.00 H ATOM 6435 HB2 LEU 558 -23.620 10.788 44.574 1.00 0.00 H ATOM 6436 HB3 LEU 558 -24.797 10.415 45.853 1.00 0.00 H ATOM 6437 HG LEU 558 -22.809 10.087 47.407 1.00 0.00 H ATOM 6438 HD11 LEU 558 -20.691 11.246 46.726 1.00 0.00 H ATOM 6439 HD12 LEU 558 -21.066 9.891 45.635 1.00 0.00 H ATOM 6440 HD13 LEU 558 -21.398 11.564 45.124 1.00 0.00 H ATOM 6441 HD21 LEU 558 -22.542 12.507 47.825 1.00 0.00 H ATOM 6442 HD22 LEU 558 -23.290 12.845 46.246 1.00 0.00 H ATOM 6443 HD23 LEU 558 -24.234 12.045 47.526 1.00 0.00 H ATOM 6444 N GLN 559 -22.876 7.092 46.565 1.00 0.00 N ATOM 6445 CA GLN 559 -23.205 6.098 47.527 1.00 0.00 C ATOM 6446 C GLN 559 -22.298 6.267 48.684 1.00 0.00 C ATOM 6447 O GLN 559 -22.325 7.300 49.343 1.00 0.00 O ATOM 6448 CB GLN 559 -23.074 4.689 46.946 1.00 0.00 C ATOM 6449 CG GLN 559 -23.597 3.590 47.855 1.00 0.00 C ATOM 6450 CD GLN 559 -23.471 2.213 47.230 1.00 0.00 C ATOM 6451 OE1 GLN 559 -23.020 2.073 46.090 1.00 0.00 O ATOM 6452 NE2 GLN 559 -23.873 1.188 47.972 1.00 0.00 N ATOM 6453 H GLN 559 -21.916 7.189 46.265 1.00 0.00 H ATOM 6454 HA GLN 559 -24.242 6.222 47.839 1.00 0.00 H ATOM 6455 HB2 GLN 559 -23.623 4.683 46.005 1.00 0.00 H ATOM 6456 HB3 GLN 559 -22.014 4.528 46.748 1.00 0.00 H ATOM 6457 HG2 GLN 559 -23.315 3.508 48.904 1.00 0.00 H ATOM 6458 HG3 GLN 559 -24.638 3.907 47.784 1.00 0.00 H ATOM 6459 HE21 GLN 559 -23.815 0.256 47.613 1.00 0.00 H ATOM 6460 HE22 GLN 559 -24.234 1.347 48.891 1.00 0.00 H ATOM 6461 N SER 560 -21.457 5.249 48.934 1.00 0.00 N ATOM 6462 CA SER 560 -20.560 5.233 50.052 1.00 0.00 C ATOM 6463 C SER 560 -19.548 6.309 49.909 1.00 0.00 C ATOM 6464 O SER 560 -19.320 7.067 50.851 1.00 0.00 O ATOM 6465 CB SER 560 -19.885 3.881 50.175 1.00 0.00 C ATOM 6466 OG SER 560 -19.014 3.826 51.271 1.00 0.00 O ATOM 6467 H SER 560 -21.465 4.464 48.298 1.00 0.00 H ATOM 6468 HA SER 560 -21.068 5.304 51.015 1.00 0.00 H ATOM 6469 HB2 SER 560 -20.653 3.118 50.294 1.00 0.00 H ATOM 6470 HB3 SER 560 -19.321 3.688 49.264 1.00 0.00 H ATOM 6471 HG SER 560 -18.608 2.957 51.314 1.00 0.00 H ATOM 6472 N GLU 561 -18.901 6.446 48.740 1.00 0.00 N ATOM 6473 CA GLU 561 -17.991 7.547 48.701 1.00 0.00 C ATOM 6474 C GLU 561 -18.847 8.727 48.447 1.00 0.00 C ATOM 6475 O GLU 561 -19.158 9.086 47.314 1.00 0.00 O ATOM 6476 CB GLU 561 -16.919 7.383 47.621 1.00 0.00 C ATOM 6477 CG GLU 561 -15.927 6.260 47.886 1.00 0.00 C ATOM 6478 CD GLU 561 -14.973 6.621 48.990 1.00 0.00 C ATOM 6479 OE1 GLU 561 -15.049 7.724 49.476 1.00 0.00 O ATOM 6480 OE2 GLU 561 -14.244 5.761 49.423 1.00 0.00 O ATOM 6481 H GLU 561 -19.001 5.861 47.922 1.00 0.00 H ATOM 6482 HA GLU 561 -17.443 7.606 49.642 1.00 0.00 H ATOM 6483 HB2 GLU 561 -17.439 7.194 46.683 1.00 0.00 H ATOM 6484 HB3 GLU 561 -16.385 8.331 47.557 1.00 0.00 H ATOM 6485 HG2 GLU 561 -16.401 5.306 48.115 1.00 0.00 H ATOM 6486 HG3 GLU 561 -15.380 6.175 46.947 1.00 0.00 H ATOM 6487 N PHE 562 -19.184 9.404 49.546 1.00 0.00 N ATOM 6488 CA PHE 562 -19.956 10.584 49.505 1.00 0.00 C ATOM 6489 C PHE 562 -18.944 11.573 49.135 1.00 0.00 C ATOM 6490 O PHE 562 -17.765 11.358 49.410 1.00 0.00 O ATOM 6491 CB PHE 562 -20.635 10.913 50.836 1.00 0.00 C ATOM 6492 CG PHE 562 -21.815 10.038 51.146 1.00 0.00 C ATOM 6493 CD1 PHE 562 -21.706 9.000 52.061 1.00 0.00 C ATOM 6494 CD2 PHE 562 -23.037 10.248 50.525 1.00 0.00 C ATOM 6495 CE1 PHE 562 -22.792 8.194 52.347 1.00 0.00 C ATOM 6496 CE2 PHE 562 -24.123 9.444 50.810 1.00 0.00 C ATOM 6497 CZ PHE 562 -24.001 8.416 51.722 1.00 0.00 C ATOM 6498 H PHE 562 -18.872 9.053 50.439 1.00 0.00 H ATOM 6499 HA PHE 562 -20.813 10.444 48.844 1.00 0.00 H ATOM 6500 HB2 PHE 562 -19.930 10.789 51.657 1.00 0.00 H ATOM 6501 HB3 PHE 562 -21.003 11.939 50.825 1.00 0.00 H ATOM 6502 HD1 PHE 562 -20.751 8.825 52.556 1.00 0.00 H ATOM 6503 HD2 PHE 562 -23.134 11.060 49.803 1.00 0.00 H ATOM 6504 HE1 PHE 562 -22.691 7.383 53.068 1.00 0.00 H ATOM 6505 HE2 PHE 562 -25.078 9.621 50.314 1.00 0.00 H ATOM 6506 HZ PHE 562 -24.856 7.780 51.947 1.00 0.00 H ATOM 6507 N ASP 563 -19.360 12.629 48.425 1.00 0.00 N ATOM 6508 CA ASP 563 -18.347 13.556 48.067 1.00 0.00 C ATOM 6509 C ASP 563 -17.936 14.129 49.374 1.00 0.00 C ATOM 6510 O ASP 563 -18.739 14.724 50.090 1.00 0.00 O ATOM 6511 CB ASP 563 -18.847 14.631 47.098 1.00 0.00 C ATOM 6512 CG ASP 563 -17.752 15.529 46.537 1.00 0.00 C ATOM 6513 OD1 ASP 563 -16.611 15.326 46.878 1.00 0.00 O ATOM 6514 OD2 ASP 563 -18.041 16.304 45.657 1.00 0.00 O ATOM 6515 H ASP 563 -20.312 12.803 48.136 1.00 0.00 H ATOM 6516 HA ASP 563 -17.520 13.033 47.589 1.00 0.00 H ATOM 6517 HB2 ASP 563 -19.446 14.233 46.279 1.00 0.00 H ATOM 6518 HB3 ASP 563 -19.484 15.211 47.767 1.00 0.00 H ATOM 6519 N LEU 564 -16.638 13.940 49.683 1.00 0.00 N ATOM 6520 CA LEU 564 -16.005 14.372 50.890 1.00 0.00 C ATOM 6521 C LEU 564 -16.767 13.812 52.043 1.00 0.00 C ATOM 6522 O LEU 564 -17.077 14.518 52.999 1.00 0.00 O ATOM 6523 CB LEU 564 -15.942 15.902 50.964 1.00 0.00 C ATOM 6524 CG LEU 564 -15.197 16.581 49.807 1.00 0.00 C ATOM 6525 CD1 LEU 564 -15.253 18.094 49.966 1.00 0.00 C ATOM 6526 CD2 LEU 564 -13.756 16.095 49.776 1.00 0.00 C ATOM 6527 H LEU 564 -16.092 13.452 48.988 1.00 0.00 H ATOM 6528 HA LEU 564 -14.981 14.002 50.918 1.00 0.00 H ATOM 6529 HB2 LEU 564 -17.005 16.127 50.907 1.00 0.00 H ATOM 6530 HB3 LEU 564 -15.549 16.244 51.921 1.00 0.00 H ATOM 6531 HG LEU 564 -15.677 16.262 48.881 1.00 0.00 H ATOM 6532 HD11 LEU 564 -14.723 18.567 49.139 1.00 0.00 H ATOM 6533 HD12 LEU 564 -16.293 18.422 49.962 1.00 0.00 H ATOM 6534 HD13 LEU 564 -14.785 18.378 50.907 1.00 0.00 H ATOM 6535 HD21 LEU 564 -13.228 16.578 48.952 1.00 0.00 H ATOM 6536 HD22 LEU 564 -13.266 16.345 50.717 1.00 0.00 H ATOM 6537 HD23 LEU 564 -13.737 15.015 49.632 1.00 0.00 H ATOM 6538 N GLY 565 -17.118 12.515 51.950 1.00 0.00 N ATOM 6539 CA GLY 565 -17.797 11.886 53.038 1.00 0.00 C ATOM 6540 C GLY 565 -16.772 11.749 54.104 1.00 0.00 C ATOM 6541 O GLY 565 -17.032 11.972 55.283 1.00 0.00 O ATOM 6542 H GLY 565 -16.912 11.976 51.121 1.00 0.00 H ATOM 6543 HA2 GLY 565 -18.630 12.514 53.349 1.00 0.00 H ATOM 6544 HA3 GLY 565 -18.176 10.918 52.709 1.00 0.00 H ATOM 6545 N CYS 566 -15.557 11.361 53.680 1.00 0.00 N ATOM 6546 CA CYS 566 -14.478 11.207 54.598 1.00 0.00 C ATOM 6547 C CYS 566 -13.718 12.523 54.623 1.00 0.00 C ATOM 6548 O CYS 566 -14.329 13.552 55.016 1.00 0.00 O ATOM 6549 OXT CYS 566 -12.516 12.521 54.246 1.00 0.00 O ATOM 6550 CB CYS 566 -13.643 10.086 53.978 1.00 0.00 C ATOM 6551 SG CYS 566 -12.169 9.638 54.925 1.00 0.00 S ATOM 6552 H CYS 566 -15.400 11.175 52.699 1.00 0.00 H ATOM 6553 HA CYS 566 -14.796 10.899 55.594 1.00 0.00 H ATOM 6554 HB2 CYS 566 -14.237 9.176 53.895 1.00 0.00 H ATOM 6555 HB3 CYS 566 -13.289 10.382 52.991 1.00 0.00 H ATOM 6556 HG CYS 566 -11.754 8.687 54.095 1.00 0.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 205 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.55 40.0 50 8.1 619 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 219 ARMSMC SURFACE . . . . . . . . 79.41 37.5 40 13.1 305 ARMSMC BURIED . . . . . . . . 57.61 50.0 10 3.2 314 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.44 58.3 24 8.9 269 ARMSSC1 RELIABLE SIDE CHAINS . 79.11 56.5 23 9.2 251 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 95 ARMSSC1 SURFACE . . . . . . . . 81.42 52.6 19 13.8 138 ARMSSC1 BURIED . . . . . . . . 59.98 80.0 5 3.8 131 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 39.63 78.9 19 12.4 153 ARMSSC2 RELIABLE SIDE CHAINS . 42.83 75.0 16 13.3 120 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC2 SURFACE . . . . . . . . 44.28 73.3 15 19.2 78 ARMSSC2 BURIED . . . . . . . . 10.36 100.0 4 5.3 75 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.21 33.3 6 13.0 46 ARMSSC3 RELIABLE SIDE CHAINS . 80.80 20.0 5 13.5 37 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC3 SURFACE . . . . . . . . 74.21 33.3 6 20.0 30 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 64.47 0.0 1 12.5 8 ARMSSC4 RELIABLE SIDE CHAINS . 64.47 0.0 1 12.5 8 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 64.47 0.0 1 16.7 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.67 (Number of atoms: 26) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.67 26 8.3 312 CRMSCA CRN = ALL/NP . . . . . 0.4490 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 111 CRMSCA SURFACE . . . . . . . . 12.47 21 13.5 155 CRMSCA BURIED . . . . . . . . 7.44 5 3.2 157 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.70 128 8.3 1547 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 552 CRMSMC SURFACE . . . . . . . . 12.48 103 13.4 769 CRMSMC BURIED . . . . . . . . 7.69 25 3.2 778 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.89 101 7.8 1291 CRMSSC RELIABLE SIDE CHAINS . 13.10 91 8.0 1131 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 469 CRMSSC SURFACE . . . . . . . . 13.73 82 12.8 642 CRMSSC BURIED . . . . . . . . 8.35 19 2.9 649 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.25 205 8.1 2539 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 913 CRMSALL SURFACE . . . . . . . . 13.05 166 13.2 1262 CRMSALL BURIED . . . . . . . . 7.99 39 3.1 1277 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.807 1.000 0.500 26 8.3 312 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 111 ERRCA SURFACE . . . . . . . . 11.686 1.000 0.500 21 13.5 155 ERRCA BURIED . . . . . . . . 7.113 1.000 0.500 5 3.2 157 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.840 1.000 0.500 128 8.3 1547 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 552 ERRMC SURFACE . . . . . . . . 11.672 1.000 0.500 103 13.4 769 ERRMC BURIED . . . . . . . . 7.412 1.000 0.500 25 3.2 778 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.950 1.000 0.500 101 7.8 1291 ERRSC RELIABLE SIDE CHAINS . 12.143 1.000 0.500 91 8.0 1131 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 469 ERRSC SURFACE . . . . . . . . 12.869 1.000 0.500 82 12.8 642 ERRSC BURIED . . . . . . . . 7.983 1.000 0.500 19 2.9 649 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.340 1.000 0.500 205 8.1 2539 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 913 ERRALL SURFACE . . . . . . . . 12.193 1.000 0.500 166 13.2 1262 ERRALL BURIED . . . . . . . . 7.707 1.000 0.500 39 3.1 1277 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 12 26 312 DISTCA CA (P) 0.00 0.00 0.00 0.32 3.85 312 DISTCA CA (RMS) 0.00 0.00 0.00 4.19 7.56 DISTCA ALL (N) 0 1 2 11 95 205 2539 DISTALL ALL (P) 0.00 0.04 0.08 0.43 3.74 2539 DISTALL ALL (RMS) 0.00 1.89 1.99 3.89 7.72 DISTALL END of the results output