####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS045_1_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS045_1_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 109 - 139 4.78 10.20 LONGEST_CONTINUOUS_SEGMENT: 31 110 - 140 4.87 10.01 LCS_AVERAGE: 60.15 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 121 - 138 1.92 11.31 LONGEST_CONTINUOUS_SEGMENT: 18 122 - 139 1.95 11.53 LCS_AVERAGE: 28.30 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 121 - 127 1.00 12.12 LONGEST_CONTINUOUS_SEGMENT: 7 122 - 128 0.73 11.58 LONGEST_CONTINUOUS_SEGMENT: 7 123 - 129 0.94 10.76 LONGEST_CONTINUOUS_SEGMENT: 7 132 - 138 0.72 10.90 LCS_AVERAGE: 11.85 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 4 16 0 3 4 4 4 5 7 9 9 10 11 13 14 15 16 16 16 16 17 17 LCS_GDT A 97 A 97 4 4 16 3 3 4 4 6 6 8 9 9 10 11 11 13 15 16 16 16 21 21 22 LCS_GDT R 98 R 98 4 4 16 3 3 4 4 4 6 7 9 9 10 11 11 13 15 16 18 19 21 21 23 LCS_GDT G 99 G 99 4 5 16 3 3 4 4 6 6 8 9 10 11 12 13 14 15 16 18 19 21 24 29 LCS_GDT W 100 W 100 3 5 18 3 3 4 5 5 6 9 11 11 11 12 13 14 16 18 19 20 26 33 35 LCS_GDT E 101 E 101 3 9 18 3 3 5 7 7 10 10 11 11 11 12 13 15 17 18 21 21 26 27 38 LCS_GDT C 102 C 102 6 9 18 3 4 6 7 9 10 10 11 11 14 15 16 16 19 19 25 30 38 39 39 LCS_GDT T 103 T 103 6 9 18 5 5 6 7 9 10 10 11 13 14 15 16 16 20 31 35 37 38 39 39 LCS_GDT K 104 K 104 6 9 18 5 5 6 7 9 10 10 11 13 14 15 16 23 29 32 35 37 38 39 39 LCS_GDT D 105 D 105 6 9 18 5 5 6 7 9 10 10 11 13 14 15 19 23 29 32 35 37 38 39 39 LCS_GDT R 106 R 106 6 9 18 5 5 6 7 9 10 10 11 13 14 15 20 23 27 32 35 37 38 39 39 LCS_GDT C 107 C 107 6 9 18 5 5 6 7 9 10 10 11 13 14 16 20 23 29 32 35 37 38 39 39 LCS_GDT G 108 G 108 4 9 18 3 4 4 7 9 10 10 11 13 14 15 17 23 25 29 35 37 38 39 39 LCS_GDT E 109 E 109 4 9 31 3 4 6 7 9 10 10 11 13 14 16 20 23 25 30 35 37 38 39 39 LCS_GDT V 110 V 110 3 9 31 3 3 7 7 9 10 14 16 16 17 18 21 23 25 29 34 37 38 39 39 LCS_GDT R 111 R 111 3 3 31 3 3 3 3 4 6 11 13 15 18 23 26 29 29 32 35 37 38 39 39 LCS_GDT N 112 N 112 4 5 31 3 3 4 4 5 8 11 13 19 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT E 113 E 113 4 5 31 3 3 4 4 5 5 10 14 18 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT E 114 E 114 4 12 31 3 5 10 12 15 17 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT N 115 N 115 4 15 31 3 5 11 13 15 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT A 116 A 116 3 15 31 3 5 5 13 15 16 18 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 117 C 117 4 15 31 3 4 4 7 8 13 16 16 18 22 25 27 29 29 32 35 37 38 39 39 LCS_GDT H 118 H 118 4 15 31 3 4 4 7 12 15 18 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 119 C 119 6 15 31 5 6 11 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT S 120 S 120 6 15 31 5 6 11 14 16 19 20 22 24 24 26 27 29 29 30 34 37 38 39 39 LCS_GDT E 121 E 121 7 18 31 5 5 11 13 16 19 20 22 24 24 26 27 29 29 29 30 35 38 39 39 LCS_GDT D 122 D 122 7 18 31 5 7 11 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 123 C 123 7 18 31 5 7 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT L 124 L 124 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT S 125 S 125 7 18 31 4 7 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT R 126 R 126 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT G 127 G 127 7 18 31 4 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT D 128 D 128 7 18 31 4 7 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 129 C 129 7 18 31 4 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 130 C 130 6 18 31 4 5 9 14 16 18 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT T 131 T 131 5 18 31 4 5 9 14 16 18 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT N 132 N 132 7 18 31 5 8 11 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT Y 133 Y 133 7 18 31 5 6 8 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT Q 134 Q 134 7 18 31 5 6 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT V 135 V 135 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT V 136 V 136 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT C 137 C 137 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT K 138 K 138 7 18 31 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 LCS_GDT G 139 G 139 3 18 31 0 3 5 8 14 18 20 21 21 24 25 27 29 29 32 35 37 38 39 39 LCS_GDT E 140 E 140 3 4 31 0 3 5 5 5 6 8 9 10 13 13 15 17 21 32 35 37 38 39 39 LCS_AVERAGE LCS_A: 33.43 ( 11.85 28.30 60.15 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 12 14 16 19 20 22 24 24 26 27 29 29 32 35 37 38 39 39 GDT PERCENT_AT 11.11 17.78 26.67 31.11 35.56 42.22 44.44 48.89 53.33 53.33 57.78 60.00 64.44 64.44 71.11 77.78 82.22 84.44 86.67 86.67 GDT RMS_LOCAL 0.14 0.63 1.07 1.20 1.52 1.89 2.09 2.38 2.67 2.67 3.28 3.44 3.90 3.90 5.51 5.95 6.07 6.16 6.37 6.37 GDT RMS_ALL_AT 11.78 11.23 11.05 11.09 11.38 11.20 11.28 10.95 10.87 10.87 10.49 10.42 10.19 10.19 10.12 10.16 10.16 10.14 10.02 10.02 # Checking swapping # possible swapping detected: E 109 E 109 # possible swapping detected: D 122 D 122 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 27.165 0 0.499 0.889 29.422 0.000 0.000 LGA A 97 A 97 23.225 0 0.622 0.564 25.118 0.000 0.000 LGA R 98 R 98 22.043 0 0.238 1.371 25.982 0.000 0.000 LGA G 99 G 99 20.901 0 0.565 0.565 21.683 0.000 0.000 LGA W 100 W 100 18.906 0 0.370 1.255 23.002 0.000 0.000 LGA E 101 E 101 17.686 0 0.597 0.453 18.152 0.000 0.000 LGA C 102 C 102 14.774 0 0.082 0.709 15.737 0.000 0.000 LGA T 103 T 103 13.794 0 0.158 1.139 14.023 0.000 0.000 LGA K 104 K 104 13.611 0 0.029 0.584 15.141 0.000 0.000 LGA D 105 D 105 13.311 0 0.099 1.066 14.642 0.000 0.000 LGA R 106 R 106 13.675 0 0.167 1.307 18.516 0.000 0.000 LGA C 107 C 107 13.524 0 0.631 0.560 13.740 0.000 0.000 LGA G 108 G 108 15.628 0 0.232 0.232 15.628 0.000 0.000 LGA E 109 E 109 14.636 0 0.612 1.167 16.080 0.000 0.000 LGA V 110 V 110 13.751 0 0.612 1.010 16.833 0.119 0.068 LGA R 111 R 111 10.013 0 0.638 1.511 17.051 1.905 0.693 LGA N 112 N 112 8.134 0 0.627 1.146 8.919 6.190 7.202 LGA E 113 E 113 8.656 0 0.148 0.459 17.034 11.071 4.921 LGA E 114 E 114 4.013 0 0.682 0.894 9.834 33.214 19.312 LGA N 115 N 115 3.195 0 0.565 1.203 5.729 43.333 43.512 LGA A 116 A 116 5.341 0 0.197 0.210 7.809 21.905 23.810 LGA C 117 C 117 7.581 0 0.681 0.924 9.195 12.738 9.524 LGA H 118 H 118 5.065 0 0.051 1.117 10.838 36.905 19.524 LGA C 119 C 119 2.438 0 0.384 0.972 6.215 60.952 51.825 LGA S 120 S 120 2.473 0 0.030 0.392 3.501 66.786 61.270 LGA E 121 E 121 2.938 0 0.091 0.764 6.840 57.143 41.323 LGA D 122 D 122 2.156 0 0.225 0.965 4.347 68.810 59.048 LGA C 123 C 123 1.685 0 0.034 0.777 5.233 77.381 66.746 LGA L 124 L 124 1.369 0 0.035 0.400 3.773 83.690 70.595 LGA S 125 S 125 0.771 0 0.087 0.485 3.047 90.595 82.302 LGA R 126 R 126 0.491 0 0.113 0.590 2.243 95.238 85.758 LGA G 127 G 127 0.712 0 0.030 0.030 0.847 90.476 90.476 LGA D 128 D 128 0.837 0 0.202 0.854 3.202 88.214 75.714 LGA C 129 C 129 0.848 0 0.041 0.277 2.535 79.643 77.698 LGA C 130 C 130 3.620 0 0.062 0.231 5.978 53.810 45.635 LGA T 131 T 131 3.717 0 0.158 1.263 7.099 50.238 36.531 LGA N 132 N 132 1.802 0 0.259 0.982 6.548 70.833 49.643 LGA Y 133 Y 133 2.787 0 0.051 0.321 6.398 60.952 40.476 LGA Q 134 Q 134 2.353 0 0.072 0.912 4.022 62.857 57.513 LGA V 135 V 135 1.002 0 0.021 0.109 1.370 81.429 82.721 LGA V 136 V 136 1.864 0 0.040 0.217 3.124 69.048 66.259 LGA C 137 C 137 2.908 0 0.225 0.313 3.353 57.262 54.841 LGA K 138 K 138 3.037 0 0.244 1.104 10.660 42.619 26.138 LGA G 139 G 139 7.373 0 0.696 0.696 10.978 9.048 9.048 LGA E 140 E 140 14.192 0 0.201 0.891 15.742 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.952 8.769 9.548 35.209 30.225 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 22 2.38 43.889 40.788 0.887 LGA_LOCAL RMSD: 2.381 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.947 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.952 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.617299 * X + -0.784630 * Y + 0.057430 * Z + 2.735626 Y_new = 0.120653 * X + -0.166551 * Y + -0.978623 * Z + 67.943115 Z_new = 0.777422 * X + -0.597174 * Y + 0.197480 * Z + -7.933165 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.948572 -0.890557 -1.251425 [DEG: 168.9408 -51.0251 -71.7014 ] ZXZ: 0.058617 1.372009 2.225810 [DEG: 3.3585 78.6104 127.5295 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS045_1_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS045_1_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 22 2.38 40.788 8.95 REMARK ---------------------------------------------------------- MOLECULE T0543TS045_1_1-D2 USER MOD reduce.3.15.091106 removed 282 hydrogens (0 hets) REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PAR REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT N/A ATOM 890 N THR 96 -1.535 100.141 6.086 1.00 99.90 N ATOM 891 CA THR 96 -2.088 101.064 7.069 1.00 99.90 C ATOM 892 C THR 96 -1.041 101.469 8.098 1.00 99.90 C ATOM 893 O THR 96 -0.946 100.871 9.170 1.00 99.90 O ATOM 894 CB THR 96 -3.301 100.454 7.799 1.00 99.90 C ATOM 895 CG2 THR 96 -2.873 99.256 8.632 1.00 99.90 C ATOM 896 OG1 THR 96 -3.893 101.439 8.654 1.00 99.90 O ATOM 899 N ALA 97 -0.254 102.487 7.765 1.00 99.90 N ATOM 900 CA ALA 97 0.753 103.007 8.683 1.00 99.90 C ATOM 901 C ALA 97 0.108 103.637 9.910 1.00 99.90 C ATOM 902 O ALA 97 0.720 103.707 10.976 1.00 99.90 O ATOM 903 CB ALA 97 1.644 104.015 7.971 1.00 99.90 C ATOM 905 N ARG 98 -1.130 104.093 9.754 1.00 99.90 N ATOM 906 CA ARG 98 -1.860 104.717 10.851 1.00 99.90 C ATOM 907 C ARG 98 -2.196 103.702 11.937 1.00 99.90 C ATOM 908 O ARG 98 -2.089 103.995 13.128 1.00 99.90 O ATOM 909 CB ARG 98 -3.105 105.449 10.369 1.00 99.90 C ATOM 910 CG ARG 98 -3.019 105.987 8.950 1.00 99.90 C ATOM 911 CD ARG 98 -3.961 107.098 8.659 1.00 99.90 C ATOM 912 NE ARG 98 -4.310 107.242 7.255 1.00 99.90 N ATOM 913 CZ ARG 98 -5.548 107.513 6.798 1.00 99.90 C ATOM 914 NH1 ARG 98 -6.537 107.765 7.627 1.00 99.90 H ATOM 915 NH2 ARG 98 -5.748 107.498 5.491 1.00 99.90 H ATOM 922 N GLY 99 -2.603 102.508 11.519 1.00 99.90 N ATOM 923 CA GLY 99 -2.906 101.432 12.455 1.00 99.90 C ATOM 924 C GLY 99 -1.637 100.728 12.917 1.00 99.90 C ATOM 925 O GLY 99 -1.579 100.198 14.025 1.00 99.90 O ATOM 927 N TRP 100 -0.621 100.727 12.059 1.00 99.90 N ATOM 928 CA TRP 100 0.648 100.086 12.378 1.00 99.90 C ATOM 929 C TRP 100 1.470 100.937 13.337 1.00 99.90 C ATOM 930 O TRP 100 2.367 101.671 12.920 1.00 99.90 O ATOM 931 CB TRP 100 1.446 99.820 11.099 1.00 99.90 C ATOM 932 CG TRP 100 2.769 99.161 11.346 1.00 99.90 C ATOM 933 CD1 TRP 100 2.979 97.863 11.708 1.00 99.90 C ATOM 934 CD2 TRP 100 4.064 99.765 11.250 1.00 99.90 C ATOM 935 CE2 TRP 100 5.012 98.776 11.566 1.00 99.90 C ATOM 936 CE3 TRP 100 4.515 101.051 10.925 1.00 99.90 C ATOM 937 NE1 TRP 100 4.323 97.622 11.844 1.00 99.90 N ATOM 938 CZ2 TRP 100 6.376 99.025 11.571 1.00 99.90 C ATOM 939 CZ3 TRP 100 5.882 101.302 10.928 1.00 99.90 C ATOM 940 CH2 TRP 100 6.785 100.318 11.241 1.00 99.90 H ATOM 943 N GLU 101 1.158 100.836 14.626 1.00 99.90 N ATOM 944 CA GLU 101 1.803 101.664 15.638 1.00 99.90 C ATOM 945 C GLU 101 3.020 100.966 16.228 1.00 99.90 C ATOM 946 O GLU 101 3.606 101.437 17.203 1.00 99.90 O ATOM 947 CB GLU 101 0.812 102.022 16.747 1.00 99.90 C ATOM 948 CG GLU 101 -0.632 101.647 16.446 1.00 99.90 C ATOM 949 CD GLU 101 -1.549 102.070 17.559 1.00 99.90 C ATOM 950 OE1 GLU 101 -1.067 102.585 18.539 1.00 99.90 O ATOM 951 OE2 GLU 101 -2.742 101.983 17.384 1.00 99.90 O ATOM 953 N CYS 102 3.397 99.839 15.633 1.00 99.90 N ATOM 954 CA CYS 102 4.579 99.102 16.063 1.00 99.90 C ATOM 955 C CYS 102 5.848 99.911 15.828 1.00 99.90 C ATOM 956 O CYS 102 6.051 100.467 14.747 1.00 99.90 O ATOM 957 CB CYS 102 4.553 97.866 15.164 1.00 99.90 C ATOM 958 SG CYS 102 5.781 96.607 15.586 1.00 99.90 S ATOM 960 N THR 103 6.702 99.974 16.844 1.00 99.90 N ATOM 961 CA THR 103 7.928 100.758 16.769 1.00 99.90 C ATOM 962 C THR 103 8.784 100.330 15.584 1.00 99.90 C ATOM 963 O THR 103 9.181 99.170 15.480 1.00 99.90 O ATOM 964 CB THR 103 8.759 100.635 18.060 1.00 99.90 C ATOM 965 CG2 THR 103 10.189 101.091 17.819 1.00 99.90 C ATOM 966 OG1 THR 103 8.170 101.441 19.089 1.00 99.90 O ATOM 969 N LYS 104 9.065 101.274 14.692 1.00 99.90 N ATOM 970 CA LYS 104 9.833 100.986 13.488 1.00 99.90 C ATOM 971 C LYS 104 11.270 100.612 13.826 1.00 99.90 C ATOM 972 O LYS 104 11.874 99.767 13.165 1.00 99.90 O ATOM 973 CB LYS 104 9.811 102.185 12.537 1.00 99.90 C ATOM 974 CG LYS 104 9.754 101.817 11.061 1.00 99.90 C ATOM 975 CD LYS 104 10.703 102.677 10.239 1.00 99.90 C ATOM 976 CE LYS 104 12.016 101.955 9.972 1.00 99.90 C ATOM 977 NZ LYS 104 12.854 102.676 8.975 1.00 99.90 N ATOM 982 N ASP 105 11.813 101.245 14.859 1.00 99.90 N ATOM 983 CA ASP 105 13.168 100.953 15.311 1.00 99.90 C ATOM 984 C ASP 105 13.283 99.522 15.820 1.00 99.90 C ATOM 985 O ASP 105 14.319 98.877 15.660 1.00 99.90 O ATOM 986 CB ASP 105 13.591 101.935 16.406 1.00 99.90 C ATOM 987 CG ASP 105 13.785 103.368 15.926 1.00 99.90 C ATOM 988 OD1 ASP 105 14.001 103.556 14.753 1.00 99.90 O ATOM 989 OD2 ASP 105 13.560 104.267 16.701 1.00 99.90 O ATOM 991 N ARG 106 12.211 99.029 16.433 1.00 99.90 N ATOM 992 CA ARG 106 12.189 97.672 16.963 1.00 99.90 C ATOM 993 C ARG 106 12.231 96.641 15.843 1.00 99.90 C ATOM 994 O ARG 106 12.903 95.616 15.953 1.00 99.90 O ATOM 995 CB ARG 106 11.007 97.438 17.892 1.00 99.90 C ATOM 996 CG ARG 106 11.122 98.099 19.255 1.00 99.90 C ATOM 997 CD ARG 106 10.592 97.283 20.378 1.00 99.90 C ATOM 998 NE ARG 106 10.857 97.832 21.698 1.00 99.90 N ATOM 999 CZ ARG 106 12.073 97.885 22.276 1.00 99.90 C ATOM 1000 NH1 ARG 106 13.100 97.254 21.750 1.00 99.90 H ATOM 1001 NH2 ARG 106 12.202 98.569 23.399 1.00 99.90 H ATOM 1008 N CYS 107 11.510 96.920 14.763 1.00 99.90 N ATOM 1009 CA CYS 107 11.520 96.053 13.589 1.00 99.90 C ATOM 1010 C CYS 107 12.912 95.967 12.979 1.00 99.90 C ATOM 1011 O CYS 107 13.333 94.906 12.516 1.00 99.90 O ATOM 1012 CB CYS 107 10.556 96.762 12.638 1.00 99.90 C ATOM 1013 SG CYS 107 8.859 96.893 13.248 1.00 99.90 S ATOM 1015 N GLY 108 13.624 97.089 12.981 1.00 99.90 N ATOM 1016 CA GLY 108 15.017 97.113 12.552 1.00 99.90 C ATOM 1017 C GLY 108 15.897 96.302 13.494 1.00 99.90 C ATOM 1018 O GLY 108 16.797 95.585 13.057 1.00 99.90 O ATOM 1020 N GLU 109 15.631 96.419 14.790 1.00 99.90 N ATOM 1021 CA GLU 109 16.374 95.667 15.796 1.00 99.90 C ATOM 1022 C GLU 109 16.188 94.166 15.609 1.00 99.90 C ATOM 1023 O GLU 109 17.124 93.388 15.795 1.00 99.90 O ATOM 1024 CB GLU 109 15.939 96.079 17.204 1.00 99.90 C ATOM 1025 CG GLU 109 15.881 97.583 17.430 1.00 99.90 C ATOM 1026 CD GLU 109 17.173 98.101 18.002 1.00 99.90 C ATOM 1027 OE1 GLU 109 18.179 97.459 17.819 1.00 99.90 O ATOM 1028 OE2 GLU 109 17.173 99.190 18.523 1.00 99.90 O ATOM 1030 N VAL 110 14.978 93.766 15.240 1.00 99.90 N ATOM 1031 CA VAL 110 14.691 92.368 14.941 1.00 99.90 C ATOM 1032 C VAL 110 15.550 91.864 13.789 1.00 99.90 C ATOM 1033 O VAL 110 16.092 90.760 13.844 1.00 99.90 O ATOM 1034 CB VAL 110 13.205 92.159 14.590 1.00 99.90 C ATOM 1035 CG1 VAL 110 12.900 90.677 14.433 1.00 99.90 C ATOM 1036 CG2 VAL 110 12.314 92.775 15.657 1.00 99.90 C ATOM 1038 N ARG 111 15.673 92.679 12.748 1.00 99.90 N ATOM 1039 CA ARG 111 16.498 92.332 11.595 1.00 99.90 C ATOM 1040 C ARG 111 17.970 92.241 11.981 1.00 99.90 C ATOM 1041 O ARG 111 18.708 91.411 11.451 1.00 99.90 O ATOM 1042 CB ARG 111 16.286 93.285 10.430 1.00 99.90 C ATOM 1043 CG ARG 111 15.387 92.755 9.324 1.00 99.90 C ATOM 1044 CD ARG 111 14.560 93.791 8.656 1.00 99.90 C ATOM 1045 NE ARG 111 15.147 94.341 7.444 1.00 99.90 N ATOM 1046 CZ ARG 111 15.132 95.646 7.110 1.00 99.90 C ATOM 1047 NH1 ARG 111 15.196 96.581 8.033 1.00 99.90 H ATOM 1048 NH2 ARG 111 15.028 95.963 5.832 1.00 99.90 H ATOM 1055 N ASN 112 18.388 93.097 12.905 1.00 99.90 N ATOM 1056 CA ASN 112 19.777 93.127 13.349 1.00 99.90 C ATOM 1057 C ASN 112 20.122 91.883 14.157 1.00 99.90 C ATOM 1058 O ASN 112 21.238 91.369 14.077 1.00 99.90 O ATOM 1059 CB ASN 112 20.075 94.376 14.157 1.00 99.90 C ATOM 1060 CG ASN 112 21.323 95.094 13.723 1.00 99.90 C ATOM 1061 ND2 ASN 112 22.014 95.655 14.683 1.00 99.90 N ATOM 1062 OD1 ASN 112 21.696 95.077 12.544 1.00 99.90 O ATOM 1066 N GLU 113 19.160 91.403 14.937 1.00 99.90 N ATOM 1067 CA GLU 113 19.383 90.261 15.815 1.00 99.90 C ATOM 1068 C GLU 113 19.183 88.947 15.069 1.00 99.90 C ATOM 1069 O GLU 113 20.012 88.041 15.157 1.00 99.90 O ATOM 1070 CB GLU 113 18.450 90.324 17.027 1.00 99.90 C ATOM 1071 CG GLU 113 18.472 91.652 17.769 1.00 99.90 C ATOM 1072 CD GLU 113 19.010 91.491 19.163 1.00 99.90 C ATOM 1073 OE1 GLU 113 19.292 90.381 19.545 1.00 99.90 O ATOM 1074 OE2 GLU 113 19.245 92.487 19.806 1.00 99.90 O ATOM 1076 N GLU 114 18.080 88.851 14.335 1.00 99.90 N ATOM 1077 CA GLU 114 17.710 87.608 13.670 1.00 99.90 C ATOM 1078 C GLU 114 17.411 87.841 12.195 1.00 99.90 C ATOM 1079 O GLU 114 17.018 88.937 11.797 1.00 99.90 O ATOM 1080 CB GLU 114 16.499 86.972 14.358 1.00 99.90 C ATOM 1081 CG GLU 114 16.288 87.418 15.797 1.00 99.90 C ATOM 1082 CD GLU 114 15.752 86.297 16.643 1.00 99.90 C ATOM 1083 OE1 GLU 114 15.070 85.452 16.113 1.00 99.90 O ATOM 1084 OE2 GLU 114 16.115 86.222 17.793 1.00 99.90 O ATOM 1086 N ASN 115 17.601 86.803 11.387 1.00 99.90 N ATOM 1087 CA ASN 115 17.301 86.878 9.961 1.00 99.90 C ATOM 1088 C ASN 115 15.969 86.213 9.643 1.00 99.90 C ATOM 1089 O ASN 115 15.739 85.765 8.519 1.00 99.90 O ATOM 1090 CB ASN 115 18.409 86.259 9.129 1.00 99.90 C ATOM 1091 CG ASN 115 18.731 84.841 9.508 1.00 99.90 C ATOM 1092 ND2 ASN 115 19.281 84.116 8.568 1.00 99.90 N ATOM 1093 OD1 ASN 115 18.552 84.430 10.660 1.00 99.90 O ATOM 1097 N ALA 116 15.091 86.149 10.639 1.00 99.90 N ATOM 1098 CA ALA 116 13.793 85.507 10.477 1.00 99.90 C ATOM 1099 C ALA 116 12.834 86.394 9.692 1.00 99.90 C ATOM 1100 O ALA 116 11.746 85.961 9.310 1.00 99.90 O ATOM 1101 CB ALA 116 13.203 85.154 11.834 1.00 99.90 C ATOM 1103 N CYS 117 13.242 87.636 9.457 1.00 99.90 N ATOM 1104 CA CYS 117 12.449 88.566 8.663 1.00 99.90 C ATOM 1105 C CYS 117 12.643 88.321 7.172 1.00 99.90 C ATOM 1106 O CYS 117 11.930 88.884 6.341 1.00 99.90 O ATOM 1107 CB CYS 117 13.021 89.925 9.064 1.00 99.90 C ATOM 1108 SG CYS 117 13.203 90.166 10.847 1.00 99.90 S ATOM 1110 N HIS 118 13.613 87.474 6.837 1.00 99.90 N ATOM 1111 CA HIS 118 13.947 87.203 5.444 1.00 99.90 C ATOM 1112 C HIS 118 13.643 85.757 5.078 1.00 99.90 C ATOM 1113 O HIS 118 13.319 84.942 5.941 1.00 99.90 O ATOM 1114 CB HIS 118 15.422 87.515 5.171 1.00 99.90 C ATOM 1115 CG HIS 118 15.873 88.827 5.734 1.00 99.90 C ATOM 1116 CD2 HIS 118 16.669 89.117 6.790 1.00 99.90 C ATOM 1117 ND1 HIS 118 15.499 90.038 5.190 1.00 99.90 N ATOM 1118 CE1 HIS 118 16.046 91.018 5.889 1.00 99.90 C ATOM 1119 NE2 HIS 118 16.759 90.486 6.864 1.00 99.90 N ATOM 1123 N CYS 119 13.750 85.444 3.790 1.00 99.90 N ATOM 1124 CA CYS 119 13.459 84.101 3.303 1.00 99.90 C ATOM 1125 C CYS 119 14.220 83.805 2.016 1.00 99.90 C ATOM 1126 O CYS 119 13.840 84.267 0.939 1.00 99.90 O ATOM 1127 CB CYS 119 11.955 84.156 3.036 1.00 99.90 C ATOM 1128 SG CYS 119 11.338 82.856 1.941 1.00 99.90 S ATOM 1130 N SER 120 15.296 83.034 2.135 1.00 99.90 N ATOM 1131 CA SER 120 16.053 82.590 0.970 1.00 99.90 C ATOM 1132 C SER 120 15.615 81.201 0.525 1.00 99.90 C ATOM 1133 O SER 120 14.945 80.483 1.269 1.00 99.90 O ATOM 1134 CB SER 120 17.536 82.604 1.277 1.00 99.90 C ATOM 1135 OG SER 120 18.090 81.317 1.258 1.00 99.90 O ATOM 1138 N GLU 121 15.994 80.827 -0.690 1.00 99.90 N ATOM 1139 CA GLU 121 15.761 79.476 -1.184 1.00 99.90 C ATOM 1140 C GLU 121 16.605 78.459 -0.427 1.00 99.90 C ATOM 1141 O GLU 121 16.212 77.301 -0.278 1.00 99.90 O ATOM 1142 CB GLU 121 16.060 79.395 -2.683 1.00 99.90 C ATOM 1143 CG GLU 121 14.827 79.450 -3.574 1.00 99.90 C ATOM 1144 CD GLU 121 14.999 78.596 -4.800 1.00 99.90 C ATOM 1145 OE1 GLU 121 16.051 78.023 -4.958 1.00 99.90 O ATOM 1146 OE2 GLU 121 14.044 78.424 -5.520 1.00 99.90 O ATOM 1148 N ASP 122 17.764 78.897 0.051 1.00 99.90 N ATOM 1149 CA ASP 122 18.620 78.054 0.877 1.00 99.90 C ATOM 1150 C ASP 122 17.965 77.751 2.219 1.00 99.90 C ATOM 1151 O ASP 122 18.033 76.626 2.713 1.00 99.90 O ATOM 1152 CB ASP 122 19.980 78.722 1.096 1.00 99.90 C ATOM 1153 CG ASP 122 20.653 79.212 -0.180 1.00 99.90 C ATOM 1154 OD1 ASP 122 20.756 78.444 -1.107 1.00 99.90 O ATOM 1155 OD2 ASP 122 20.915 80.388 -0.275 1.00 99.90 O ATOM 1157 N CYS 123 17.332 78.762 2.803 1.00 99.90 N ATOM 1158 CA CYS 123 16.624 78.593 4.066 1.00 99.90 C ATOM 1159 C CYS 123 15.447 77.637 3.914 1.00 99.90 C ATOM 1160 O CYS 123 15.166 76.837 4.805 1.00 99.90 O ATOM 1161 CB CYS 123 16.132 80.009 4.369 1.00 99.90 C ATOM 1162 SG CYS 123 17.363 81.079 5.151 1.00 99.90 S ATOM 1164 N LEU 124 14.762 77.726 2.778 1.00 99.90 N ATOM 1165 CA LEU 124 13.648 76.833 2.484 1.00 99.90 C ATOM 1166 C LEU 124 14.099 75.377 2.466 1.00 99.90 C ATOM 1167 O LEU 124 13.433 74.504 3.023 1.00 99.90 O ATOM 1168 CB LEU 124 13.007 77.209 1.141 1.00 99.90 C ATOM 1169 CG LEU 124 12.200 78.513 1.147 1.00 99.90 C ATOM 1170 CD1 LEU 124 10.858 78.298 0.458 1.00 99.90 C ATOM 1171 CD2 LEU 124 12.000 78.982 2.580 1.00 99.90 C ATOM 1173 N SER 125 15.235 75.124 1.826 1.00 99.90 N ATOM 1174 CA SER 125 15.787 73.776 1.751 1.00 99.90 C ATOM 1175 C SER 125 16.364 73.342 3.093 1.00 99.90 C ATOM 1176 O SER 125 16.374 72.156 3.421 1.00 99.90 O ATOM 1177 CB SER 125 16.849 73.705 0.673 1.00 99.90 C ATOM 1178 OG SER 125 17.677 72.586 0.823 1.00 99.90 O ATOM 1181 N ARG 126 16.843 74.310 3.865 1.00 99.90 N ATOM 1182 CA ARG 126 17.339 74.043 5.211 1.00 99.90 C ATOM 1183 C ARG 126 16.191 73.776 6.178 1.00 99.90 C ATOM 1184 O ARG 126 16.335 73.012 7.131 1.00 99.90 O ATOM 1185 CB ARG 126 18.248 75.151 5.719 1.00 99.90 C ATOM 1186 CG ARG 126 19.534 75.336 4.926 1.00 99.90 C ATOM 1187 CD ARG 126 20.613 76.039 5.667 1.00 99.90 C ATOM 1188 NE ARG 126 21.808 76.303 4.883 1.00 99.90 N ATOM 1189 CZ ARG 126 22.615 77.368 5.054 1.00 99.90 C ATOM 1190 NH1 ARG 126 22.176 78.465 5.629 1.00 99.90 H ATOM 1191 NH2 ARG 126 23.856 77.290 4.605 1.00 99.90 H ATOM 1198 N GLY 127 15.052 74.412 5.925 1.00 99.90 N ATOM 1199 CA GLY 127 13.876 74.241 6.771 1.00 99.90 C ATOM 1200 C GLY 127 13.837 75.286 7.878 1.00 99.90 C ATOM 1201 O GLY 127 13.401 75.005 8.994 1.00 99.90 O ATOM 1203 N ASP 128 14.297 76.493 7.563 1.00 99.90 N ATOM 1204 CA ASP 128 14.321 77.581 8.532 1.00 99.90 C ATOM 1205 C ASP 128 13.004 78.345 8.536 1.00 99.90 C ATOM 1206 O ASP 128 12.690 79.057 9.490 1.00 99.90 O ATOM 1207 CB ASP 128 15.481 78.534 8.241 1.00 99.90 C ATOM 1208 CG ASP 128 16.145 79.116 9.482 1.00 99.90 C ATOM 1209 OD1 ASP 128 16.126 80.315 9.634 1.00 99.90 O ATOM 1210 OD2 ASP 128 16.525 78.356 10.340 1.00 99.90 O ATOM 1212 N CYS 129 12.235 78.194 7.463 1.00 99.90 N ATOM 1213 CA CYS 129 10.952 78.874 7.337 1.00 99.90 C ATOM 1214 C CYS 129 9.801 77.951 7.717 1.00 99.90 C ATOM 1215 O CYS 129 9.906 76.731 7.600 1.00 99.90 O ATOM 1216 CB CYS 129 10.897 79.220 5.849 1.00 99.90 C ATOM 1217 SG CYS 129 11.866 80.673 5.381 1.00 99.90 S ATOM 1219 N CYS 130 8.701 78.543 8.172 1.00 99.90 N ATOM 1220 CA CYS 130 7.538 77.774 8.599 1.00 99.90 C ATOM 1221 C CYS 130 6.343 78.034 7.690 1.00 99.90 C ATOM 1222 O CYS 130 6.353 78.964 6.883 1.00 99.90 O ATOM 1223 CB CYS 130 7.274 78.314 10.004 1.00 99.90 C ATOM 1224 SG CYS 130 8.290 77.564 11.298 1.00 99.90 S ATOM 1226 N THR 131 5.312 77.206 7.827 1.00 99.90 N ATOM 1227 CA THR 131 4.107 77.344 7.018 1.00 99.90 C ATOM 1228 C THR 131 3.416 78.676 7.281 1.00 99.90 C ATOM 1229 O THR 131 3.073 79.404 6.349 1.00 99.90 O ATOM 1230 CB THR 131 3.111 76.200 7.287 1.00 99.90 C ATOM 1231 CG2 THR 131 1.703 76.613 6.887 1.00 99.90 C ATOM 1232 OG1 THR 131 3.497 75.041 6.537 1.00 99.90 O ATOM 1235 N ASN 132 3.214 78.990 8.557 1.00 99.90 N ATOM 1236 CA ASN 132 2.585 80.248 8.946 1.00 99.90 C ATOM 1237 C ASN 132 3.426 81.442 8.513 1.00 99.90 C ATOM 1238 O ASN 132 2.900 82.428 7.999 1.00 99.90 O ATOM 1239 CB ASN 132 2.329 80.300 10.440 1.00 99.90 C ATOM 1240 CG ASN 132 1.935 78.977 11.035 1.00 99.90 C ATOM 1241 ND2 ASN 132 1.326 79.035 12.191 1.00 99.90 N ATOM 1242 OD1 ASN 132 2.116 77.919 10.420 1.00 99.90 O ATOM 1246 N TYR 133 4.734 81.345 8.723 1.00 99.90 N ATOM 1247 CA TYR 133 5.652 82.409 8.337 1.00 99.90 C ATOM 1248 C TYR 133 5.598 82.667 6.837 1.00 99.90 C ATOM 1249 O TYR 133 5.472 83.810 6.398 1.00 99.90 O ATOM 1250 CB TYR 133 7.082 82.061 8.758 1.00 99.90 C ATOM 1251 CG TYR 133 8.144 82.881 8.057 1.00 99.90 C ATOM 1252 CD1 TYR 133 8.513 84.128 8.537 1.00 99.90 C ATOM 1253 CD2 TYR 133 8.775 82.402 6.918 1.00 99.90 C ATOM 1254 CE1 TYR 133 9.480 84.881 7.901 1.00 99.90 C ATOM 1255 CE2 TYR 133 9.746 83.145 6.274 1.00 99.90 C ATOM 1256 CZ TYR 133 10.096 84.385 6.769 1.00 99.90 C ATOM 1257 OH TYR 133 11.062 85.128 6.132 1.00 99.90 H ATOM 1260 N GLN 134 5.691 81.598 6.054 1.00 99.90 N ATOM 1261 CA GLN 134 5.638 81.704 4.600 1.00 99.90 C ATOM 1262 C GLN 134 4.408 82.481 4.150 1.00 99.90 C ATOM 1263 O GLN 134 4.493 83.345 3.276 1.00 99.90 O ATOM 1264 CB GLN 134 5.635 80.314 3.960 1.00 99.90 C ATOM 1265 CG GLN 134 6.960 79.577 4.065 1.00 99.90 C ATOM 1266 CD GLN 134 7.084 78.463 3.043 1.00 99.90 C ATOM 1267 NE2 GLN 134 6.750 77.245 3.453 1.00 99.90 N ATOM 1268 OE1 GLN 134 7.476 78.696 1.895 1.00 99.90 O ATOM 1272 N VAL 135 3.266 82.168 4.750 1.00 99.90 N ATOM 1273 CA VAL 135 2.024 82.870 4.444 1.00 99.90 C ATOM 1274 C VAL 135 2.115 84.342 4.823 1.00 99.90 C ATOM 1275 O VAL 135 1.730 85.218 4.048 1.00 99.90 O ATOM 1276 CB VAL 135 0.824 82.237 5.174 1.00 99.90 C ATOM 1277 CG1 VAL 135 -0.466 82.951 4.796 1.00 99.90 C ATOM 1278 CG2 VAL 135 0.725 80.754 4.850 1.00 99.90 C ATOM 1280 N VAL 136 2.629 84.611 6.019 1.00 99.90 N ATOM 1281 CA VAL 136 2.772 85.979 6.503 1.00 99.90 C ATOM 1282 C VAL 136 3.647 86.804 5.569 1.00 99.90 C ATOM 1283 O VAL 136 3.335 87.956 5.268 1.00 99.90 O ATOM 1284 CB VAL 136 3.371 86.017 7.920 1.00 99.90 C ATOM 1285 CG1 VAL 136 3.179 87.391 8.543 1.00 99.90 C ATOM 1286 CG2 VAL 136 2.740 84.943 8.796 1.00 99.90 C ATOM 1288 N CYS 137 4.744 86.208 5.114 1.00 99.90 N ATOM 1289 CA CYS 137 5.702 86.910 4.268 1.00 99.90 C ATOM 1290 C CYS 137 5.591 86.459 2.817 1.00 99.90 C ATOM 1291 O CYS 137 6.545 86.573 2.048 1.00 99.90 O ATOM 1292 CB CYS 137 7.047 86.490 4.861 1.00 99.90 C ATOM 1293 SG CYS 137 7.044 86.288 6.659 1.00 99.90 S ATOM 1295 N LYS 138 4.421 85.946 2.450 1.00 99.90 N ATOM 1296 CA LYS 138 4.152 85.563 1.070 1.00 99.90 C ATOM 1297 C LYS 138 4.683 86.607 0.096 1.00 99.90 C ATOM 1298 O LYS 138 5.071 86.283 -1.027 1.00 99.90 O ATOM 1299 CB LYS 138 2.653 85.358 0.854 1.00 99.90 C ATOM 1300 CG LYS 138 1.922 86.576 0.306 1.00 99.90 C ATOM 1301 CD LYS 138 0.692 86.171 -0.493 1.00 99.90 C ATOM 1302 CE LYS 138 -0.345 87.285 -0.517 1.00 99.90 C ATOM 1303 NZ LYS 138 -1.423 87.021 -1.509 1.00 99.90 N ATOM 1308 N GLY 139 4.698 87.863 0.532 1.00 99.90 N ATOM 1309 CA GLY 139 5.254 88.946 -0.270 1.00 99.90 C ATOM 1310 C GLY 139 5.923 89.994 0.608 1.00 99.90 C ATOM 1311 O GLY 139 5.569 90.158 1.776 1.00 99.90 O ATOM 1313 N GLU 140 6.895 90.701 0.041 1.00 99.90 N ATOM 1314 CA GLU 140 7.629 91.723 0.777 1.00 99.90 C ATOM 1315 C GLU 140 7.160 93.121 0.396 1.00 99.90 C ATOM 1316 O GLU 140 7.184 93.496 -0.778 1.00 99.90 O ATOM 1317 CB GLU 140 9.133 91.587 0.527 1.00 99.90 C ATOM 1318 CG GLU 140 9.658 90.161 0.620 1.00 99.90 C ATOM 1319 CD GLU 140 9.550 89.629 2.021 1.00 99.90 C ATOM 1320 OE1 GLU 140 8.696 90.085 2.746 1.00 99.90 O ATOM 1321 OE2 GLU 140 10.243 88.690 2.336 1.00 99.90 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.28 52.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 72.85 50.0 62 100.0 62 ARMSMC BURIED . . . . . . . . 67.40 57.7 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.92 35.9 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 88.99 33.3 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 82.20 42.3 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 98.37 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.07 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 60.48 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 68.35 25.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 76.92 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.76 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 75.99 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 67.47 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 114.40 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.87 0.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 79.87 0.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 78.57 0.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 82.42 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.95 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.95 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1989 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 9.40 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.75 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.89 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.33 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.74 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.39 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 10.62 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 10.80 112 100.0 112 CRMSSC BURIED . . . . . . . . 9.47 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.58 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 9.98 240 100.0 240 CRMSALL BURIED . . . . . . . . 8.59 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 91.658 0.849 0.861 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 91.361 0.845 0.858 32 100.0 32 ERRCA BURIED . . . . . . . . 92.388 0.861 0.870 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 91.690 0.850 0.862 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 91.390 0.845 0.858 156 100.0 156 ERRMC BURIED . . . . . . . . 92.411 0.861 0.871 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 90.261 0.826 0.842 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 90.047 0.823 0.839 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 90.012 0.823 0.839 112 100.0 112 ERRSC BURIED . . . . . . . . 90.787 0.834 0.847 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 91.066 0.840 0.853 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 90.802 0.836 0.850 240 100.0 240 ERRALL BURIED . . . . . . . . 91.670 0.849 0.860 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 5 32 45 45 DISTCA CA (P) 0.00 0.00 0.00 11.11 71.11 45 DISTCA CA (RMS) 0.00 0.00 0.00 3.68 6.68 DISTCA ALL (N) 0 0 4 34 222 345 345 DISTALL ALL (P) 0.00 0.00 1.16 9.86 64.35 345 DISTALL ALL (RMS) 0.00 0.00 2.52 3.87 6.92 DISTALL END of the results output