####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 371), selected 40 , name T0543TS033_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS033_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.07 2.07 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 56 - 94 1.97 2.08 LCS_AVERAGE: 96.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 73 - 93 0.94 2.17 LCS_AVERAGE: 38.38 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 9 39 40 6 20 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 9 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 9 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 9 39 40 9 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 9 39 40 10 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 9 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 9 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 9 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 9 39 40 3 20 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 9 39 40 3 7 21 28 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 6 39 40 3 5 10 18 27 32 36 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 4 39 40 3 3 5 11 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 4 39 40 3 3 4 4 5 18 21 36 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 3 39 40 3 3 4 16 31 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 6 39 40 1 3 13 18 29 33 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 18 39 40 2 14 22 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 18 39 40 2 4 14 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 21 39 40 7 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 21 39 40 9 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 21 39 40 9 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 21 39 40 4 13 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 21 39 40 4 8 21 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 21 39 40 9 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 21 39 40 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 21 39 40 7 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 21 39 40 6 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 21 39 40 4 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 21 39 40 5 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 21 39 40 5 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 21 39 40 8 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 17 39 40 3 6 13 28 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 7 27 40 0 3 11 17 27 33 35 38 39 40 40 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 78.38 ( 38.38 96.75 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 26 29 30 32 36 37 38 39 40 40 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 30.00 65.00 72.50 75.00 80.00 90.00 92.50 95.00 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.26 0.65 0.81 0.90 1.11 1.48 1.62 1.75 1.89 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 GDT RMS_ALL_AT 2.23 2.20 2.16 2.18 2.16 2.10 2.11 2.11 2.08 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # possible swapping detected: D 76 D 76 # possible swapping detected: D 88 D 88 # possible swapping detected: D 90 D 90 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 1.274 0 0.142 0.142 1.573 83.810 83.810 LGA S 57 S 57 0.677 0 0.036 0.659 3.316 90.476 83.730 LGA C 58 C 58 0.651 0 0.110 0.771 2.295 90.476 86.190 LGA K 59 K 59 0.958 0 0.565 0.477 3.061 78.095 81.958 LGA G 60 G 60 1.559 0 0.248 0.248 1.798 75.000 75.000 LGA R 61 R 61 0.916 0 0.342 1.028 4.476 81.548 71.558 LGA C 62 C 62 0.898 0 0.163 0.680 2.041 85.952 83.175 LGA F 63 F 63 0.956 0 0.120 0.211 1.994 83.810 79.177 LGA E 64 E 64 1.433 0 0.124 0.539 2.928 75.119 70.423 LGA L 65 L 65 3.180 0 0.668 0.994 5.793 61.190 48.095 LGA Q 66 Q 66 4.951 0 0.106 1.199 12.471 34.405 16.614 LGA E 67 E 67 2.981 0 0.245 0.937 7.039 55.357 39.841 LGA V 68 V 68 5.995 0 0.099 1.056 10.588 29.048 17.007 LGA G 69 G 69 3.182 0 0.580 0.580 3.973 59.881 59.881 LGA P 70 P 70 4.135 0 0.134 0.219 6.950 42.262 33.265 LGA P 71 P 71 2.326 0 0.273 0.400 3.137 65.119 61.769 LGA D 72 D 72 2.382 3 0.553 0.562 3.862 59.405 35.952 LGA C 73 C 73 0.826 0 0.183 0.206 1.088 90.476 87.460 LGA R 74 R 74 0.733 0 0.068 1.066 3.959 90.476 76.061 LGA C 75 C 75 0.843 0 0.368 0.761 3.585 92.857 82.698 LGA D 76 D 76 1.911 0 0.087 0.907 3.951 68.810 61.488 LGA N 77 N 77 2.935 0 0.117 0.407 5.487 62.976 47.381 LGA L 78 L 78 0.596 0 0.219 1.235 4.845 92.976 73.810 LGA C 79 C 79 0.311 0 0.034 0.046 0.536 97.619 98.413 LGA K 80 K 80 0.514 0 0.038 0.938 4.330 92.857 76.243 LGA S 81 S 81 0.931 0 0.046 0.675 1.324 90.476 87.460 LGA Y 82 Y 82 1.013 0 0.136 0.211 2.009 85.952 78.690 LGA S 83 S 83 0.690 0 0.266 0.248 1.452 88.214 85.952 LGA S 84 S 84 0.412 0 0.270 0.639 2.378 90.595 86.270 LGA C 85 C 85 0.458 0 0.047 0.090 0.557 95.238 95.238 LGA C 86 C 86 0.538 0 0.055 0.120 0.665 90.476 93.651 LGA H 87 H 87 0.621 0 0.086 1.388 7.094 92.857 59.286 LGA D 88 D 88 0.729 0 0.164 0.878 3.136 92.857 80.238 LGA F 89 F 89 0.969 0 0.090 0.187 1.869 88.214 81.558 LGA D 90 D 90 1.132 0 0.050 1.217 5.319 79.286 65.595 LGA E 91 E 91 1.242 0 0.121 0.908 4.633 81.429 63.280 LGA L 92 L 92 0.985 0 0.172 1.330 5.094 90.476 71.190 LGA C 93 C 93 0.409 0 0.058 0.102 1.801 97.619 92.302 LGA L 94 L 94 2.728 0 0.243 0.936 4.832 46.905 45.417 LGA K 95 K 95 4.242 0 0.243 1.276 13.337 48.810 25.714 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.073 1.990 3.211 77.485 68.571 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 38 1.75 83.750 89.878 2.049 LGA_LOCAL RMSD: 1.754 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.106 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.073 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.515201 * X + 0.802335 * Y + -0.301375 * Z + -56.099739 Y_new = 0.256091 * X + 0.191461 * Y + 0.947502 * Z + -65.446289 Z_new = 0.817915 * X + -0.565334 * Y + -0.106830 * Z + -15.828310 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.461300 -0.957778 -1.757561 [DEG: 26.4306 -54.8767 -100.7009 ] ZXZ: -2.833638 1.677830 2.175584 [DEG: -162.3555 96.1326 124.6518 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS033_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS033_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 38 1.75 89.878 2.07 REMARK ---------------------------------------------------------- MOLECULE T0543TS033_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 520 N GLY 56 35.236 71.692 19.433 1.00 4.04 N ATOM 521 CA GLY 56 33.911 71.895 19.940 1.00 4.04 C ATOM 522 C GLY 56 33.209 73.150 19.500 1.00 4.04 C ATOM 523 O GLY 56 32.693 73.884 20.341 1.00 4.04 O ATOM 524 N SER 57 33.141 73.456 18.188 1.00 2.70 N ATOM 525 CA SER 57 32.371 74.617 17.824 1.00 2.70 C ATOM 526 C SER 57 31.089 74.166 17.169 1.00 2.70 C ATOM 527 O SER 57 31.075 73.313 16.286 1.00 2.70 O ATOM 528 H SER 57 33.549 72.969 17.551 1.00 2.70 H ATOM 529 CB SER 57 33.179 75.526 16.896 1.00 2.70 C ATOM 530 HG SER 57 34.798 75.438 17.818 1.00 2.70 H ATOM 531 OG SER 57 34.310 76.059 17.562 1.00 2.70 O ATOM 532 N CYS 58 29.971 74.767 17.619 1.00 2.58 N ATOM 533 CA CYS 58 28.610 74.519 17.220 1.00 2.58 C ATOM 534 C CYS 58 28.273 74.999 15.852 1.00 2.58 C ATOM 535 O CYS 58 27.241 74.595 15.320 1.00 2.58 O ATOM 536 H CYS 58 30.150 75.392 18.242 1.00 2.58 H ATOM 537 CB CYS 58 27.636 75.162 18.208 1.00 2.58 C ATOM 538 SG CYS 58 25.903 74.720 17.944 1.00 2.58 S ATOM 539 N LYS 59 29.101 75.869 15.253 1.00 2.77 N ATOM 540 CA LYS 59 28.719 76.619 14.087 1.00 2.77 C ATOM 541 C LYS 59 28.094 75.771 13.020 1.00 2.77 C ATOM 542 O LYS 59 26.975 76.047 12.589 1.00 2.77 O ATOM 543 H LYS 59 29.921 75.975 15.608 1.00 2.77 H ATOM 544 CB LYS 59 29.930 77.347 13.499 1.00 2.77 C ATOM 545 CD LYS 59 30.845 78.929 11.780 1.00 2.77 C ATOM 546 CE LYS 59 30.534 79.750 10.538 1.00 2.77 C ATOM 547 CG LYS 59 29.612 78.193 12.277 1.00 2.77 C ATOM 548 HZ1 LYS 59 31.517 80.947 9.315 1.00 2.77 H ATOM 549 HZ2 LYS 59 32.372 79.893 9.834 1.00 2.77 H ATOM 550 HZ3 LYS 59 32.030 81.030 10.671 1.00 2.77 H ATOM 551 NZ LYS 59 31.733 80.478 10.039 1.00 2.77 N ATOM 552 N GLY 60 28.785 74.730 12.537 1.00 3.34 N ATOM 553 CA GLY 60 28.144 73.897 11.566 1.00 3.34 C ATOM 554 C GLY 60 27.113 73.006 12.197 1.00 3.34 C ATOM 555 O GLY 60 26.042 72.780 11.635 1.00 3.34 O ATOM 556 H GLY 60 29.626 74.547 12.802 1.00 3.34 H ATOM 557 N ARG 61 27.406 72.462 13.392 1.00 2.82 N ATOM 558 CA ARG 61 26.535 71.417 13.836 1.00 2.82 C ATOM 559 C ARG 61 25.630 71.812 14.951 1.00 2.82 C ATOM 560 O ARG 61 25.829 71.401 16.090 1.00 2.82 O ATOM 561 H ARG 61 28.100 72.717 13.905 1.00 2.82 H ATOM 562 CB ARG 61 27.345 70.196 14.279 1.00 2.82 C ATOM 563 CD ARG 61 28.850 68.288 13.653 1.00 2.82 C ATOM 564 HE ARG 61 30.175 69.447 14.611 1.00 2.82 H ATOM 565 NE ARG 61 29.947 68.619 14.558 1.00 2.82 N ATOM 566 CG ARG 61 28.125 69.530 13.159 1.00 2.82 C ATOM 567 CZ ARG 61 30.603 67.728 15.295 1.00 2.82 C ATOM 568 HH11 ARG 61 31.802 68.953 16.130 1.00 2.82 H ATOM 569 HH12 ARG 61 32.013 67.545 16.567 1.00 2.82 H ATOM 570 NH1 ARG 61 31.588 68.121 16.090 1.00 2.82 H ATOM 571 HH21 ARG 61 29.633 66.190 14.718 1.00 2.82 H ATOM 572 HH22 ARG 61 30.696 65.869 15.711 1.00 2.82 H ATOM 573 NH2 ARG 61 30.272 66.445 15.233 1.00 2.82 H ATOM 574 N CYS 62 24.573 72.584 14.659 1.00 2.93 N ATOM 575 CA CYS 62 23.612 72.733 15.698 1.00 2.93 C ATOM 576 C CYS 62 22.732 71.558 15.532 1.00 2.93 C ATOM 577 O CYS 62 22.616 71.002 14.452 1.00 2.93 O ATOM 578 H CYS 62 24.448 72.994 13.868 1.00 2.93 H ATOM 579 CB CYS 62 22.889 74.075 15.570 1.00 2.93 C ATOM 580 SG CYS 62 21.670 74.394 16.866 1.00 2.93 S ATOM 581 N PHE 63 22.086 71.122 16.599 1.00 3.35 N ATOM 582 CA PHE 63 21.200 70.014 16.501 1.00 3.35 C ATOM 583 C PHE 63 21.793 68.793 15.898 1.00 3.35 C ATOM 584 O PHE 63 21.199 68.154 15.033 1.00 3.35 O ATOM 585 H PHE 63 22.209 71.530 17.392 1.00 3.35 H ATOM 586 CB PHE 63 19.959 70.390 15.688 1.00 3.35 C ATOM 587 CG PHE 63 19.167 71.520 16.280 1.00 3.35 C ATOM 588 CZ PHE 63 17.699 73.608 17.382 1.00 3.35 C ATOM 589 CD1 PHE 63 18.896 72.658 15.539 1.00 3.35 C ATOM 590 CE1 PHE 63 18.167 73.698 16.084 1.00 3.35 C ATOM 591 CD2 PHE 63 18.692 71.446 17.578 1.00 3.35 C ATOM 592 CE2 PHE 63 17.963 72.486 18.122 1.00 3.35 C ATOM 593 N GLU 64 22.989 68.410 16.362 1.00 4.88 N ATOM 594 CA GLU 64 23.372 67.081 16.031 1.00 4.88 C ATOM 595 C GLU 64 22.945 66.392 17.269 1.00 4.88 C ATOM 596 O GLU 64 23.443 66.683 18.351 1.00 4.88 O ATOM 597 H GLU 64 23.538 68.928 16.853 1.00 4.88 H ATOM 598 CB GLU 64 24.867 67.020 15.708 1.00 4.88 C ATOM 599 CD GLU 64 26.835 65.624 14.963 1.00 4.88 C ATOM 600 CG GLU 64 25.356 65.641 15.297 1.00 4.88 C ATOM 601 OE1 GLU 64 27.654 65.545 15.903 1.00 4.88 O ATOM 602 OE2 GLU 64 27.175 65.689 13.763 1.00 4.88 O ATOM 603 N LEU 65 21.962 65.496 17.157 1.00 5.71 N ATOM 604 CA LEU 65 21.501 64.912 18.369 1.00 5.71 C ATOM 605 C LEU 65 22.468 63.859 18.769 1.00 5.71 C ATOM 606 O LEU 65 22.999 63.110 17.949 1.00 5.71 O ATOM 607 H LEU 65 21.592 65.255 16.373 1.00 5.71 H ATOM 608 CB LEU 65 20.090 64.347 18.189 1.00 5.71 C ATOM 609 CG LEU 65 18.936 65.338 18.357 1.00 5.71 C ATOM 610 CD1 LEU 65 19.046 66.468 17.346 1.00 5.71 C ATOM 611 CD2 LEU 65 17.596 64.631 18.218 1.00 5.71 C ATOM 612 N GLN 66 22.640 63.772 20.090 1.00 6.46 N ATOM 613 CA GLN 66 23.671 63.088 20.805 1.00 6.46 C ATOM 614 C GLN 66 23.693 61.614 20.805 1.00 6.46 C ATOM 615 O GLN 66 22.744 60.878 20.541 1.00 6.46 O ATOM 616 H GLN 66 22.000 64.217 20.540 1.00 6.46 H ATOM 617 CB GLN 66 23.662 63.496 22.279 1.00 6.46 C ATOM 618 CD GLN 66 24.038 65.312 23.995 1.00 6.46 C ATOM 619 CG GLN 66 24.034 64.951 22.522 1.00 6.46 C ATOM 620 OE1 GLN 66 24.206 64.448 24.855 1.00 6.46 O ATOM 621 HE21 GLN 66 23.847 66.862 25.147 1.00 6.46 H ATOM 622 HE22 GLN 66 23.733 67.194 23.628 1.00 6.46 H ATOM 623 NE2 GLN 66 23.853 66.594 24.288 1.00 6.46 N ATOM 624 N GLU 67 24.930 61.184 21.063 1.00 7.38 N ATOM 625 CA GLU 67 25.300 59.846 21.278 1.00 7.38 C ATOM 626 C GLU 67 26.383 59.925 22.286 1.00 7.38 C ATOM 627 O GLU 67 26.965 60.981 22.494 1.00 7.38 O ATOM 628 H GLU 67 25.552 61.834 21.093 1.00 7.38 H ATOM 629 CB GLU 67 25.730 59.191 19.963 1.00 7.38 C ATOM 630 CD GLU 67 27.319 59.189 18.001 1.00 7.38 C ATOM 631 CG GLU 67 26.969 59.811 19.338 1.00 7.38 C ATOM 632 OE1 GLU 67 26.658 58.204 17.612 1.00 7.38 O ATOM 633 OE2 GLU 67 28.256 59.686 17.341 1.00 7.38 O ATOM 634 N VAL 68 26.656 58.840 23.007 1.00 7.63 N ATOM 635 CA VAL 68 27.750 58.995 23.902 1.00 7.63 C ATOM 636 C VAL 68 28.965 58.971 23.052 1.00 7.63 C ATOM 637 O VAL 68 28.982 58.363 21.986 1.00 7.63 O ATOM 638 H VAL 68 26.217 58.056 22.966 1.00 7.63 H ATOM 639 CB VAL 68 27.755 57.898 24.982 1.00 7.63 C ATOM 640 CG1 VAL 68 26.481 57.959 25.811 1.00 7.63 C ATOM 641 CG2 VAL 68 27.916 56.525 24.346 1.00 7.63 C ATOM 642 N GLY 69 30.021 59.653 23.500 1.00 7.88 N ATOM 643 CA GLY 69 31.208 59.632 22.716 1.00 7.88 C ATOM 644 C GLY 69 31.578 61.016 22.308 1.00 7.88 C ATOM 645 O GLY 69 32.743 61.232 22.000 1.00 7.88 O ATOM 646 H GLY 69 30.001 60.117 24.272 1.00 7.88 H ATOM 647 N PRO 70 30.668 61.944 22.195 1.00 6.61 N ATOM 648 CA PRO 70 31.105 63.288 21.916 1.00 6.61 C ATOM 649 C PRO 70 31.500 64.130 23.097 1.00 6.61 C ATOM 650 O PRO 70 30.616 64.398 23.909 1.00 6.61 O ATOM 651 CB PRO 70 29.902 63.933 21.224 1.00 6.61 C ATOM 652 CD PRO 70 29.278 61.666 21.673 1.00 6.61 C ATOM 653 CG PRO 70 29.124 62.782 20.679 1.00 6.61 C ATOM 654 N PRO 71 32.738 64.518 23.293 1.00 5.44 N ATOM 655 CA PRO 71 32.982 65.414 24.398 1.00 5.44 C ATOM 656 C PRO 71 33.146 66.882 24.236 1.00 5.44 C ATOM 657 O PRO 71 32.818 67.584 25.195 1.00 5.44 O ATOM 658 CB PRO 71 34.295 64.910 25.001 1.00 5.44 C ATOM 659 CD PRO 71 33.922 63.617 23.020 1.00 5.44 C ATOM 660 CG PRO 71 34.997 64.245 23.863 1.00 5.44 C ATOM 661 N ASP 72 33.666 67.352 23.074 1.00 3.63 N ATOM 662 CA ASP 72 34.045 68.733 22.952 1.00 3.63 C ATOM 663 C ASP 72 32.811 69.470 23.270 1.00 3.63 C ATOM 664 O ASP 72 32.784 70.332 24.146 1.00 3.63 O ATOM 665 H ASP 72 33.774 66.792 22.377 1.00 3.63 H ATOM 666 CB ASP 72 34.590 69.018 21.552 1.00 3.63 C ATOM 667 CG ASP 72 35.957 68.403 21.323 1.00 3.63 C ATOM 668 OD1 ASP 72 36.597 67.992 22.314 1.00 3.63 O ATOM 669 OD2 ASP 72 36.388 68.331 20.152 1.00 3.63 O ATOM 670 N CYS 73 31.725 69.051 22.620 1.00 3.57 N ATOM 671 CA CYS 73 30.476 69.609 22.973 1.00 3.57 C ATOM 672 C CYS 73 29.460 69.088 22.034 1.00 3.57 C ATOM 673 O CYS 73 29.750 68.564 20.959 1.00 3.57 O ATOM 674 H CYS 73 31.774 68.430 21.970 1.00 3.57 H ATOM 675 CB CYS 73 30.544 71.137 22.943 1.00 3.57 C ATOM 676 SG CYS 73 30.892 71.838 21.312 1.00 3.57 S ATOM 677 N ARG 74 28.211 69.186 22.470 1.00 2.82 N ATOM 678 CA ARG 74 27.142 68.777 21.641 1.00 2.82 C ATOM 679 C ARG 74 26.326 69.991 21.417 1.00 2.82 C ATOM 680 O ARG 74 26.274 70.891 22.252 1.00 2.82 O ATOM 681 H ARG 74 28.043 69.512 23.292 1.00 2.82 H ATOM 682 CB ARG 74 26.357 67.641 22.300 1.00 2.82 C ATOM 683 CD ARG 74 28.124 66.418 23.596 1.00 2.82 C ATOM 684 HE ARG 74 27.316 67.434 25.124 1.00 2.82 H ATOM 685 NE ARG 74 27.451 66.621 24.876 1.00 2.82 N ATOM 686 CG ARG 74 27.139 66.346 22.440 1.00 2.82 C ATOM 687 CZ ARG 74 27.041 65.636 25.669 1.00 2.82 C ATOM 688 HH11 ARG 74 26.311 66.735 27.047 1.00 2.82 H ATOM 689 HH12 ARG 74 26.172 65.279 27.329 1.00 2.82 H ATOM 690 NH1 ARG 74 26.437 65.916 26.816 1.00 2.82 H ATOM 691 HH21 ARG 74 27.627 64.192 24.569 1.00 2.82 H ATOM 692 HH22 ARG 74 26.970 63.737 25.826 1.00 2.82 H ATOM 693 NH2 ARG 74 27.235 64.374 25.313 1.00 2.82 H ATOM 694 N CYS 75 25.708 70.079 20.237 1.00 3.32 N ATOM 695 CA CYS 75 24.866 71.204 20.034 1.00 3.32 C ATOM 696 C CYS 75 23.515 70.602 20.005 1.00 3.32 C ATOM 697 O CYS 75 22.992 70.237 18.958 1.00 3.32 O ATOM 698 H CYS 75 25.805 69.466 19.586 1.00 3.32 H ATOM 699 CB CYS 75 25.258 71.940 18.751 1.00 3.32 C ATOM 700 SG CYS 75 24.307 73.446 18.436 1.00 3.32 S ATOM 701 N ASP 76 22.929 70.392 21.181 1.00 3.48 N ATOM 702 CA ASP 76 21.650 69.770 21.196 1.00 3.48 C ATOM 703 C ASP 76 20.863 70.492 22.257 1.00 3.48 C ATOM 704 O ASP 76 21.413 71.252 23.040 1.00 3.48 O ATOM 705 H ASP 76 23.322 70.632 21.954 1.00 3.48 H ATOM 706 CB ASP 76 21.786 68.271 21.468 1.00 3.48 C ATOM 707 CG ASP 76 20.551 67.490 21.063 1.00 3.48 C ATOM 708 OD1 ASP 76 19.578 68.119 20.596 1.00 3.48 O ATOM 709 OD2 ASP 76 20.556 66.251 21.211 1.00 3.48 O ATOM 710 N ASN 77 19.533 70.354 22.280 1.00 4.54 N ATOM 711 CA ASN 77 18.770 70.846 23.414 1.00 4.54 C ATOM 712 C ASN 77 19.117 69.932 24.551 1.00 4.54 C ATOM 713 O ASN 77 19.143 70.271 25.744 1.00 4.54 O ATOM 714 H ASN 77 19.111 69.955 21.593 1.00 4.54 H ATOM 715 CB ASN 77 17.276 70.876 23.082 1.00 4.54 C ATOM 716 CG ASN 77 16.913 71.996 22.128 1.00 4.54 C ATOM 717 OD1 ASN 77 17.638 72.984 22.012 1.00 4.54 O ATOM 718 HD21 ASN 77 15.526 72.481 20.859 1.00 4.54 H ATOM 719 HD22 ASN 77 15.286 71.106 21.555 1.00 4.54 H ATOM 720 ND2 ASN 77 15.788 71.845 21.440 1.00 4.54 N ATOM 721 N LEU 78 19.391 68.691 24.127 1.00 5.09 N ATOM 722 CA LEU 78 19.771 67.638 24.996 1.00 5.09 C ATOM 723 C LEU 78 21.052 68.056 25.652 1.00 5.09 C ATOM 724 O LEU 78 21.247 67.687 26.806 1.00 5.09 O ATOM 725 H LEU 78 19.324 68.542 23.241 1.00 5.09 H ATOM 726 CB LEU 78 19.916 66.328 24.219 1.00 5.09 C ATOM 727 CG LEU 78 18.624 65.713 23.679 1.00 5.09 C ATOM 728 CD1 LEU 78 18.929 64.524 22.780 1.00 5.09 C ATOM 729 CD2 LEU 78 17.710 65.293 24.820 1.00 5.09 C ATOM 730 N CYS 79 21.963 68.783 24.943 1.00 5.94 N ATOM 731 CA CYS 79 23.207 69.160 25.579 1.00 5.94 C ATOM 732 C CYS 79 22.943 70.106 26.728 1.00 5.94 C ATOM 733 O CYS 79 23.711 70.130 27.683 1.00 5.94 O ATOM 734 H CYS 79 21.800 69.028 24.092 1.00 5.94 H ATOM 735 CB CYS 79 24.155 69.801 24.563 1.00 5.94 C ATOM 736 SG CYS 79 23.599 71.400 23.929 1.00 5.94 S ATOM 737 N LYS 80 21.912 70.978 26.657 1.00 4.72 N ATOM 738 CA LYS 80 21.618 71.863 27.766 1.00 4.72 C ATOM 739 C LYS 80 21.203 71.038 28.940 1.00 4.72 C ATOM 740 O LYS 80 21.572 71.318 30.083 1.00 4.72 O ATOM 741 H LYS 80 21.407 71.006 25.912 1.00 4.72 H ATOM 742 CB LYS 80 20.531 72.866 27.377 1.00 4.72 C ATOM 743 CD LYS 80 19.166 74.882 27.988 1.00 4.72 C ATOM 744 CE LYS 80 18.813 75.873 29.086 1.00 4.72 C ATOM 745 CG LYS 80 20.195 73.870 28.468 1.00 4.72 C ATOM 746 HZ1 LYS 80 17.622 77.431 29.297 1.00 4.72 H ATOM 747 HZ2 LYS 80 17.060 76.448 28.387 1.00 4.72 H ATOM 748 HZ3 LYS 80 18.130 77.326 27.939 1.00 4.72 H ATOM 749 NZ LYS 80 17.805 76.870 28.631 1.00 4.72 N ATOM 750 N SER 81 20.400 69.988 28.669 1.00 3.97 N ATOM 751 CA SER 81 19.941 69.197 29.770 1.00 3.97 C ATOM 752 C SER 81 21.155 68.572 30.459 1.00 3.97 C ATOM 753 O SER 81 21.246 68.616 31.682 1.00 3.97 O ATOM 754 H SER 81 20.151 69.779 27.830 1.00 3.97 H ATOM 755 CB SER 81 18.959 68.128 29.289 1.00 3.97 C ATOM 756 HG SER 81 18.133 67.800 30.928 1.00 3.97 H ATOM 757 OG SER 81 18.513 67.322 30.367 1.00 3.97 O ATOM 758 N TYR 82 22.116 67.991 29.688 1.00 2.41 N ATOM 759 CA TYR 82 23.343 67.343 30.132 1.00 2.41 C ATOM 760 C TYR 82 24.321 68.322 30.724 1.00 2.41 C ATOM 761 O TYR 82 25.069 67.980 31.640 1.00 2.41 O ATOM 762 H TYR 82 21.923 68.037 28.810 1.00 2.41 H ATOM 763 CB TYR 82 24.006 66.598 28.972 1.00 2.41 C ATOM 764 CG TYR 82 23.268 65.351 28.543 1.00 2.41 C ATOM 765 HH TYR 82 21.295 61.347 27.941 1.00 2.41 H ATOM 766 OH TYR 82 21.233 61.926 27.350 1.00 2.41 H ATOM 767 CZ TYR 82 21.907 63.058 27.746 1.00 2.41 C ATOM 768 CD1 TYR 82 22.616 65.296 27.318 1.00 2.41 C ATOM 769 CE1 TYR 82 21.938 64.159 26.918 1.00 2.41 C ATOM 770 CD2 TYR 82 23.225 64.232 29.365 1.00 2.41 C ATOM 771 CE2 TYR 82 22.552 63.087 28.981 1.00 2.41 C ATOM 772 N SER 83 24.339 69.562 30.197 1.00 3.35 N ATOM 773 CA SER 83 25.306 70.589 30.496 1.00 3.35 C ATOM 774 C SER 83 26.539 70.473 29.647 1.00 3.35 C ATOM 775 O SER 83 27.579 71.031 29.994 1.00 3.35 O ATOM 776 H SER 83 23.675 69.726 29.612 1.00 3.35 H ATOM 777 CB SER 83 25.698 70.540 31.974 1.00 3.35 C ATOM 778 HG SER 83 24.005 70.174 32.664 1.00 3.35 H ATOM 779 OG SER 83 24.574 70.761 32.808 1.00 3.35 O ATOM 780 N SER 84 26.475 69.781 28.490 1.00 3.24 N ATOM 781 CA SER 84 27.644 69.754 27.652 1.00 3.24 C ATOM 782 C SER 84 27.358 70.442 26.348 1.00 3.24 C ATOM 783 O SER 84 27.384 69.830 25.276 1.00 3.24 O ATOM 784 H SER 84 25.730 69.346 28.236 1.00 3.24 H ATOM 785 CB SER 84 28.098 68.313 27.414 1.00 3.24 C ATOM 786 HG SER 84 28.722 66.911 28.476 1.00 3.24 H ATOM 787 OG SER 84 28.480 67.691 28.629 1.00 3.24 O ATOM 788 N CYS 85 27.153 71.772 26.379 1.00 2.66 N ATOM 789 CA CYS 85 26.870 72.481 25.169 1.00 2.66 C ATOM 790 C CYS 85 28.083 73.279 24.853 1.00 2.66 C ATOM 791 O CYS 85 28.866 73.625 25.733 1.00 2.66 O ATOM 792 H CYS 85 27.193 72.215 27.161 1.00 2.66 H ATOM 793 CB CYS 85 25.623 73.352 25.338 1.00 2.66 C ATOM 794 SG CYS 85 24.116 72.433 25.723 1.00 2.66 S ATOM 795 N CYS 86 28.270 73.582 23.560 1.00 2.67 N ATOM 796 CA CYS 86 29.415 74.335 23.156 1.00 2.67 C ATOM 797 C CYS 86 29.218 75.738 23.647 1.00 2.67 C ATOM 798 O CYS 86 28.120 76.145 24.022 1.00 2.67 O ATOM 799 H CYS 86 27.671 73.310 22.946 1.00 2.67 H ATOM 800 CB CYS 86 29.589 74.272 21.637 1.00 2.67 C ATOM 801 SG CYS 86 29.939 72.620 20.992 1.00 2.67 S ATOM 802 N HIS 87 30.295 76.529 23.708 1.00 3.02 N ATOM 803 CA HIS 87 30.086 77.883 24.121 1.00 3.02 C ATOM 804 C HIS 87 29.278 78.595 23.074 1.00 3.02 C ATOM 805 O HIS 87 28.356 79.349 23.382 1.00 3.02 O ATOM 806 H HIS 87 31.123 76.244 23.502 1.00 3.02 H ATOM 807 CB HIS 87 31.425 78.584 24.357 1.00 3.02 C ATOM 808 CG HIS 87 32.163 78.086 25.561 1.00 3.02 C ATOM 809 ND1 HIS 87 33.096 78.847 26.230 1.00 3.02 N ATOM 810 CE1 HIS 87 33.584 78.135 27.261 1.00 3.02 C ATOM 811 CD2 HIS 87 32.176 76.852 26.335 1.00 3.02 C ATOM 812 HE2 HIS 87 33.222 76.279 27.960 1.00 3.02 H ATOM 813 NE2 HIS 87 33.036 76.938 27.330 1.00 3.02 N ATOM 814 N ASP 88 29.622 78.348 21.794 1.00 3.08 N ATOM 815 CA ASP 88 29.042 78.911 20.607 1.00 3.08 C ATOM 816 C ASP 88 27.706 78.334 20.454 1.00 3.08 C ATOM 817 O ASP 88 26.889 78.768 19.644 1.00 3.08 O ATOM 818 H ASP 88 30.296 77.756 21.728 1.00 3.08 H ATOM 819 CB ASP 88 29.931 78.633 19.393 1.00 3.08 C ATOM 820 CG ASP 88 29.592 79.515 18.208 1.00 3.08 C ATOM 821 OD1 ASP 88 29.613 80.755 18.366 1.00 3.08 O ATOM 822 OD2 ASP 88 29.306 78.970 17.123 1.00 3.08 O ATOM 823 N PHE 89 27.479 77.310 21.263 1.00 3.60 N ATOM 824 CA PHE 89 26.312 76.559 21.141 1.00 3.60 C ATOM 825 C PHE 89 25.151 77.437 21.278 1.00 3.60 C ATOM 826 O PHE 89 24.285 77.323 20.433 1.00 3.60 O ATOM 827 H PHE 89 28.085 77.101 21.895 1.00 3.60 H ATOM 828 CB PHE 89 26.281 75.444 22.188 1.00 3.60 C ATOM 829 CG PHE 89 25.057 74.577 22.114 1.00 3.60 C ATOM 830 CZ PHE 89 22.788 72.977 21.980 1.00 3.60 C ATOM 831 CD1 PHE 89 25.098 73.350 21.475 1.00 3.60 C ATOM 832 CE1 PHE 89 23.972 72.552 21.405 1.00 3.60 C ATOM 833 CD2 PHE 89 23.865 74.987 22.684 1.00 3.60 C ATOM 834 CE2 PHE 89 22.739 74.189 22.616 1.00 3.60 C ATOM 835 N ASP 90 25.106 78.357 22.247 1.00 3.87 N ATOM 836 CA ASP 90 23.915 79.126 22.409 1.00 3.87 C ATOM 837 C ASP 90 23.613 79.947 21.222 1.00 3.87 C ATOM 838 O ASP 90 22.475 79.950 20.771 1.00 3.87 O ATOM 839 H ASP 90 25.809 78.496 22.791 1.00 3.87 H ATOM 840 CB ASP 90 24.024 80.029 23.638 1.00 3.87 C ATOM 841 CG ASP 90 22.748 80.801 23.909 1.00 3.87 C ATOM 842 OD1 ASP 90 21.859 80.258 24.599 1.00 3.87 O ATOM 843 OD2 ASP 90 22.635 81.950 23.432 1.00 3.87 O ATOM 844 N GLU 91 24.596 80.645 20.649 1.00 4.01 N ATOM 845 CA GLU 91 24.203 81.524 19.597 1.00 4.01 C ATOM 846 C GLU 91 23.676 80.784 18.430 1.00 4.01 C ATOM 847 O GLU 91 22.640 81.129 17.847 1.00 4.01 O ATOM 848 H GLU 91 25.462 80.587 20.887 1.00 4.01 H ATOM 849 CB GLU 91 25.380 82.400 19.164 1.00 4.01 C ATOM 850 CD GLU 91 24.033 84.445 18.548 1.00 4.01 C ATOM 851 CG GLU 91 25.037 83.409 18.081 1.00 4.01 C ATOM 852 OE1 GLU 91 23.887 84.621 19.776 1.00 4.01 O ATOM 853 OE2 GLU 91 23.392 85.082 17.685 1.00 4.01 O ATOM 854 N LEU 92 24.408 79.715 18.089 1.00 3.44 N ATOM 855 CA LEU 92 24.092 79.004 16.906 1.00 3.44 C ATOM 856 C LEU 92 22.736 78.399 17.001 1.00 3.44 C ATOM 857 O LEU 92 21.925 78.506 16.082 1.00 3.44 O ATOM 858 H LEU 92 25.095 79.447 18.605 1.00 3.44 H ATOM 859 CB LEU 92 25.139 77.921 16.637 1.00 3.44 C ATOM 860 CG LEU 92 24.901 77.039 15.409 1.00 3.44 C ATOM 861 CD1 LEU 92 24.900 77.875 14.139 1.00 3.44 C ATOM 862 CD2 LEU 92 25.955 75.945 15.321 1.00 3.44 C ATOM 863 N CYS 93 22.446 77.758 18.134 1.00 5.52 N ATOM 864 CA CYS 93 21.190 77.097 18.294 1.00 5.52 C ATOM 865 C CYS 93 20.039 78.025 18.425 1.00 5.52 C ATOM 866 O CYS 93 18.909 77.661 18.136 1.00 5.52 O ATOM 867 H CYS 93 23.051 77.743 18.801 1.00 5.52 H ATOM 868 CB CYS 93 21.219 76.179 19.517 1.00 5.52 C ATOM 869 SG CYS 93 22.410 74.824 19.405 1.00 5.52 S ATOM 870 N LEU 94 20.161 75.979 22.315 1.00 6.23 N ATOM 871 CA LEU 94 20.266 77.380 21.973 1.00 6.23 C ATOM 872 C LEU 94 19.488 77.692 20.690 1.00 6.23 C ATOM 873 O LEU 94 20.026 77.644 19.580 1.00 6.23 O ATOM 874 CB LEU 94 21.733 77.783 21.810 1.00 6.23 C ATOM 875 CG LEU 94 22.014 79.281 21.680 1.00 6.23 C ATOM 876 CD1 LEU 94 21.473 79.816 20.363 1.00 6.23 C ATOM 877 CD2 LEU 94 21.410 80.045 22.849 1.00 6.23 C ATOM 878 N LYS 95 18.211 78.038 20.879 1.00 7.48 N ATOM 879 CA LYS 95 17.348 78.730 19.914 1.00 7.48 C ATOM 880 C LYS 95 17.976 80.074 19.528 1.00 7.48 C ATOM 881 O LYS 95 17.676 81.123 20.092 1.00 7.48 O ATOM 882 H LYS 95 17.888 77.807 21.686 1.00 7.48 H ATOM 883 CB LYS 95 15.948 78.932 20.496 1.00 7.48 C ATOM 884 CD LYS 95 13.574 79.670 20.147 1.00 7.48 C ATOM 885 CE LYS 95 12.585 80.301 19.180 1.00 7.48 C ATOM 886 CG LYS 95 14.958 79.558 19.527 1.00 7.48 C ATOM 887 HZ1 LYS 95 10.674 80.794 19.185 1.00 7.48 H ATOM 888 HZ2 LYS 95 11.266 80.931 20.506 1.00 7.48 H ATOM 889 HZ3 LYS 95 10.925 79.614 19.996 1.00 7.48 H ATOM 890 NZ LYS 95 11.227 80.423 19.776 1.00 7.48 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 52.41 61.5 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 58.58 60.7 56 100.0 56 ARMSMC BURIED . . . . . . . . 31.69 63.6 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.64 47.2 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 84.87 48.6 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 84.17 48.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 88.90 45.5 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.88 39.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 60.28 52.9 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 79.16 38.9 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 62.69 40.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.77 44.4 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 61.27 50.0 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 59.80 42.9 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 55.02 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 46.63 40.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 46.63 40.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 29.86 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 85.47 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.07 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.07 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0518 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.13 29 100.0 29 CRMSCA BURIED . . . . . . . . 1.90 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.19 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.26 142 100.0 142 CRMSMC BURIED . . . . . . . . 2.00 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.21 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 3.70 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.49 103 100.0 103 CRMSSC BURIED . . . . . . . . 3.37 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.23 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.43 219 100.0 219 CRMSALL BURIED . . . . . . . . 2.66 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.666 0.494 0.560 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 2.601 0.466 0.537 29 100.0 29 ERRCA BURIED . . . . . . . . 2.836 0.567 0.623 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.622 0.484 0.551 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.544 0.454 0.523 142 100.0 142 ERRMC BURIED . . . . . . . . 2.824 0.563 0.621 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.703 0.266 0.282 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 1.645 0.278 0.306 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 1.640 0.242 0.249 103 100.0 103 ERRSC BURIED . . . . . . . . 1.864 0.328 0.368 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.236 0.389 0.431 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.174 0.362 0.402 219 100.0 219 ERRALL BURIED . . . . . . . . 2.397 0.458 0.506 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 18 29 35 39 40 40 40 DISTCA CA (P) 45.00 72.50 87.50 97.50 100.00 40 DISTCA CA (RMS) 0.77 1.01 1.44 1.90 2.07 DISTCA ALL (N) 83 174 219 274 296 303 303 DISTALL ALL (P) 27.39 57.43 72.28 90.43 97.69 303 DISTALL ALL (RMS) 0.72 1.19 1.54 2.22 2.78 DISTALL END of the results output