####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS028_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS028_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 96 - 105 4.84 69.40 LONGEST_CONTINUOUS_SEGMENT: 10 103 - 112 4.83 56.44 LONGEST_CONTINUOUS_SEGMENT: 10 104 - 113 4.43 55.05 LONGEST_CONTINUOUS_SEGMENT: 10 105 - 114 4.67 54.29 LONGEST_CONTINUOUS_SEGMENT: 10 107 - 116 4.94 51.63 LONGEST_CONTINUOUS_SEGMENT: 10 126 - 135 4.60 59.86 LONGEST_CONTINUOUS_SEGMENT: 10 127 - 136 4.94 60.82 LCS_AVERAGE: 21.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 108 - 114 1.97 52.81 LCS_AVERAGE: 11.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.97 68.34 LONGEST_CONTINUOUS_SEGMENT: 5 110 - 114 0.70 51.34 LONGEST_CONTINUOUS_SEGMENT: 5 116 - 120 0.89 40.69 LCS_AVERAGE: 8.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 10 3 3 3 3 3 3 4 4 6 7 9 9 9 9 10 10 10 10 10 10 LCS_GDT A 97 A 97 3 5 10 3 3 3 4 4 5 5 5 6 7 9 9 9 9 10 10 10 10 10 10 LCS_GDT R 98 R 98 3 5 10 3 3 3 4 4 5 5 5 6 7 9 9 9 9 10 10 10 10 10 10 LCS_GDT G 99 G 99 3 6 10 3 3 3 4 5 6 6 7 7 7 9 9 9 9 10 10 10 10 10 10 LCS_GDT W 100 W 100 5 6 10 3 3 5 5 5 6 6 7 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT E 101 E 101 5 6 10 4 4 5 5 5 6 6 7 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT C 102 C 102 5 6 10 4 4 5 5 5 6 6 7 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT T 103 T 103 5 6 10 4 4 5 5 5 6 6 7 7 7 9 9 9 9 10 10 10 11 11 11 LCS_GDT K 104 K 104 5 6 10 4 4 5 5 5 6 6 7 7 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT D 105 D 105 3 6 10 0 3 3 5 5 6 6 7 7 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT R 106 R 106 3 4 10 3 3 3 4 4 4 6 7 7 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT C 107 C 107 3 6 10 3 3 4 4 6 6 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT G 108 G 108 4 7 10 3 3 4 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT E 109 E 109 4 7 10 3 3 4 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT V 110 V 110 5 7 10 4 5 5 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT R 111 R 111 5 7 10 4 5 5 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT N 112 N 112 5 7 10 4 5 5 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 11 LCS_GDT E 113 E 113 5 7 10 4 5 5 5 6 7 7 7 8 8 8 10 10 10 11 11 11 11 11 11 LCS_GDT E 114 E 114 5 7 10 4 5 5 5 6 7 7 7 8 8 8 8 9 9 11 11 11 11 11 11 LCS_GDT N 115 N 115 4 4 10 3 3 4 4 4 5 6 7 7 8 8 8 9 9 9 9 10 10 11 11 LCS_GDT A 116 A 116 5 6 10 4 4 5 5 6 6 6 7 7 8 8 8 9 9 9 9 10 10 11 11 LCS_GDT C 117 C 117 5 6 9 4 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 11 11 LCS_GDT H 118 H 118 5 6 9 4 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 11 11 LCS_GDT C 119 C 119 5 6 9 4 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 11 11 LCS_GDT S 120 S 120 5 6 9 3 3 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 11 11 LCS_GDT E 121 E 121 3 6 9 3 3 4 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 11 11 LCS_GDT D 122 D 122 3 5 9 0 3 4 4 4 5 6 7 7 7 7 7 8 9 9 9 10 10 11 11 LCS_GDT C 123 C 123 3 4 9 1 3 3 3 4 4 5 6 6 7 7 7 7 8 9 9 10 10 11 11 LCS_GDT L 124 L 124 3 4 9 0 3 3 3 4 4 5 6 6 7 7 7 7 8 9 9 10 10 11 11 LCS_GDT S 125 S 125 3 4 9 0 3 3 4 4 5 6 7 8 8 8 8 8 8 9 9 10 11 11 12 LCS_GDT R 126 R 126 3 6 10 0 3 3 4 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT G 127 G 127 3 6 10 0 3 3 4 5 5 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT D 128 D 128 4 6 10 3 4 4 5 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT C 129 C 129 4 6 10 3 4 4 5 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT C 130 C 130 4 6 10 3 4 4 5 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT T 131 T 131 4 6 10 3 4 4 5 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT N 132 N 132 3 5 10 0 3 3 5 5 6 6 7 8 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT Y 133 Y 133 3 4 10 0 3 3 3 4 4 5 6 6 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT Q 134 Q 134 3 4 10 0 3 3 3 4 4 5 6 6 8 8 8 10 10 11 11 11 11 11 12 LCS_GDT V 135 V 135 3 3 10 3 3 3 3 3 4 5 6 6 8 8 9 10 10 11 11 11 11 11 12 LCS_GDT V 136 V 136 3 3 10 3 3 3 3 3 4 4 6 6 7 7 8 9 9 11 11 11 11 11 12 LCS_GDT C 137 C 137 3 4 8 3 3 3 4 4 4 4 5 5 7 7 8 8 9 9 10 10 10 11 12 LCS_GDT K 138 K 138 3 4 8 3 3 3 4 4 4 4 5 5 5 6 8 8 9 9 10 10 10 11 12 LCS_GDT G 139 G 139 3 4 7 2 3 3 4 4 4 4 5 5 5 5 6 7 9 9 10 10 10 11 12 LCS_GDT E 140 E 140 3 4 6 0 3 3 4 4 4 4 5 5 5 5 5 5 5 5 8 8 8 8 8 LCS_AVERAGE LCS_A: 13.89 ( 8.49 11.95 21.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 5 6 7 7 7 8 8 9 10 10 10 11 11 11 11 11 12 GDT PERCENT_AT 8.89 11.11 11.11 11.11 13.33 15.56 15.56 15.56 17.78 17.78 20.00 22.22 22.22 22.22 24.44 24.44 24.44 24.44 24.44 26.67 GDT RMS_LOCAL 0.22 0.70 0.70 0.70 1.40 1.97 1.97 1.97 2.71 2.71 3.99 4.43 4.43 4.43 5.05 5.05 5.05 5.05 5.05 5.79 GDT RMS_ALL_AT 40.37 51.34 51.34 51.34 51.75 52.81 52.81 52.81 53.72 53.72 55.57 55.05 55.05 55.05 54.75 54.75 54.75 54.75 54.75 60.50 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 121 E 121 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 60.931 0 0.649 0.874 62.848 0.000 0.000 LGA A 97 A 97 54.541 0 0.160 0.169 56.780 0.000 0.000 LGA R 98 R 98 48.197 0 0.719 1.520 50.586 0.000 0.000 LGA G 99 G 99 46.497 0 0.234 0.234 47.221 0.000 0.000 LGA W 100 W 100 42.183 0 0.676 1.231 43.929 0.000 0.000 LGA E 101 E 101 36.330 0 0.045 1.164 39.394 0.000 0.000 LGA C 102 C 102 29.024 0 0.018 0.131 31.617 0.000 0.000 LGA T 103 T 103 24.664 0 0.064 1.271 26.857 0.000 0.000 LGA K 104 K 104 17.253 0 0.637 1.129 20.143 0.000 0.000 LGA D 105 D 105 15.313 0 0.708 1.004 20.717 0.000 0.000 LGA R 106 R 106 12.742 0 0.703 1.125 20.619 0.000 0.000 LGA C 107 C 107 7.475 0 0.168 0.198 9.834 17.619 14.048 LGA G 108 G 108 2.943 0 0.681 0.681 5.054 57.262 57.262 LGA E 109 E 109 1.659 0 0.054 0.873 5.217 79.405 62.116 LGA V 110 V 110 1.739 0 0.058 1.091 2.647 70.833 68.299 LGA R 111 R 111 2.333 0 0.026 1.362 6.100 68.810 49.567 LGA N 112 N 112 0.528 0 0.089 1.301 4.084 88.214 74.405 LGA E 113 E 113 0.478 0 0.700 1.063 4.130 79.048 71.905 LGA E 114 E 114 2.587 0 0.709 0.699 5.384 46.905 48.571 LGA N 115 N 115 9.456 0 0.051 1.122 12.858 3.095 1.548 LGA A 116 A 116 11.300 0 0.607 0.603 13.424 0.000 0.000 LGA C 117 C 117 17.956 0 0.053 0.753 21.064 0.000 0.000 LGA H 118 H 118 22.748 0 0.045 1.216 26.622 0.000 0.000 LGA C 119 C 119 30.013 0 0.613 0.938 32.447 0.000 0.000 LGA S 120 S 120 33.859 0 0.064 0.659 36.172 0.000 0.000 LGA E 121 E 121 40.402 0 0.694 1.093 45.153 0.000 0.000 LGA D 122 D 122 40.761 0 0.685 1.007 41.102 0.000 0.000 LGA C 123 C 123 41.987 0 0.653 0.840 44.579 0.000 0.000 LGA L 124 L 124 47.247 0 0.624 0.919 52.806 0.000 0.000 LGA S 125 S 125 49.770 0 0.722 0.841 50.097 0.000 0.000 LGA R 126 R 126 49.513 0 0.708 1.310 51.890 0.000 0.000 LGA G 127 G 127 53.270 0 0.525 0.525 53.301 0.000 0.000 LGA D 128 D 128 54.551 0 0.660 1.343 55.989 0.000 0.000 LGA C 129 C 129 59.844 0 0.087 0.794 62.801 0.000 0.000 LGA C 130 C 130 62.956 0 0.096 0.889 65.569 0.000 0.000 LGA T 131 T 131 66.716 0 0.699 0.982 70.504 0.000 0.000 LGA N 132 N 132 73.387 0 0.700 1.232 75.745 0.000 0.000 LGA Y 133 Y 133 77.024 0 0.590 1.349 81.176 0.000 0.000 LGA Q 134 Q 134 83.830 0 0.661 0.747 86.644 0.000 0.000 LGA V 135 V 135 87.982 0 0.611 0.627 91.033 0.000 0.000 LGA V 136 V 136 90.591 0 0.641 0.617 93.457 0.000 0.000 LGA C 137 C 137 94.835 0 0.699 0.633 97.773 0.000 0.000 LGA K 138 K 138 99.740 0 0.673 0.923 102.786 0.000 0.000 LGA G 139 G 139 105.598 0 0.715 0.715 107.056 0.000 0.000 LGA E 140 E 140 107.190 0 0.074 1.065 108.230 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 38.506 38.512 38.606 11.360 9.949 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 7 1.97 15.556 15.093 0.339 LGA_LOCAL RMSD: 1.967 Number of atoms: 7 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 52.811 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 38.506 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.478513 * X + 0.613182 * Y + -0.628516 * Z + 98.187164 Y_new = -0.843942 * X + -0.518812 * Y + 0.136370 * Z + 14.506631 Z_new = -0.242462 * X + 0.595686 * Y + 0.765748 * Z + 86.617950 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.086596 0.244903 0.661128 [DEG: -119.5531 14.0319 37.8798 ] ZXZ: -1.784455 0.698592 -0.386553 [DEG: -102.2418 40.0264 -22.1478 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS028_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS028_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 7 1.97 15.093 38.51 REMARK ---------------------------------------------------------- MOLECULE T0543TS028_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gso_A ATOM 728 N THR 96 -5.034 105.182 -35.262 1.00270.77 N ATOM 729 CA THR 96 -5.141 103.909 -34.617 1.00270.77 C ATOM 730 CB THR 96 -5.269 102.741 -35.563 1.00270.77 C ATOM 731 OG1 THR 96 -5.436 101.535 -34.830 1.00270.77 O ATOM 732 CG2 THR 96 -4.038 102.657 -36.477 1.00270.77 C ATOM 733 C THR 96 -3.900 103.761 -33.792 1.00270.77 C ATOM 734 O THR 96 -2.786 103.772 -34.312 1.00270.77 O ATOM 735 N ALA 97 -4.062 103.655 -32.457 1.00275.51 N ATOM 736 CA ALA 97 -2.899 103.560 -31.622 1.00275.51 C ATOM 737 CB ALA 97 -2.389 104.922 -31.120 1.00275.51 C ATOM 738 C ALA 97 -3.250 102.757 -30.414 1.00275.51 C ATOM 739 O ALA 97 -4.422 102.614 -30.070 1.00275.51 O ATOM 740 N ARG 98 -2.222 102.181 -29.756 1.00337.22 N ATOM 741 CA ARG 98 -2.465 101.399 -28.578 1.00337.22 C ATOM 742 CB ARG 98 -3.129 100.047 -28.878 1.00337.22 C ATOM 743 CG ARG 98 -3.678 99.325 -27.646 1.00337.22 C ATOM 744 CD ARG 98 -4.322 97.984 -27.988 1.00337.22 C ATOM 745 NE ARG 98 -5.261 98.246 -29.111 1.00337.22 N ATOM 746 CZ ARG 98 -5.979 97.226 -29.659 1.00337.22 C ATOM 747 NH1 ARG 98 -5.928 95.977 -29.106 1.00337.22 N ATOM 748 NH2 ARG 98 -6.745 97.456 -30.763 1.00337.22 N ATOM 749 C ARG 98 -1.139 101.104 -27.951 1.00337.22 C ATOM 750 O ARG 98 -0.103 101.581 -28.411 1.00337.22 O ATOM 751 N GLY 99 -1.152 100.309 -26.861 1.00114.02 N ATOM 752 CA GLY 99 0.056 99.886 -26.214 1.00114.02 C ATOM 753 C GLY 99 0.170 100.558 -24.886 1.00114.02 C ATOM 754 O GLY 99 -0.013 101.767 -24.761 1.00114.02 O ATOM 755 N TRP 100 0.478 99.752 -23.849 1.00308.98 N ATOM 756 CA TRP 100 0.682 100.249 -22.520 1.00308.98 C ATOM 757 CB TRP 100 -0.527 100.007 -21.595 1.00308.98 C ATOM 758 CG TRP 100 -0.485 100.715 -20.260 1.00308.98 C ATOM 759 CD2 TRP 100 -1.399 100.464 -19.185 1.00308.98 C ATOM 760 CD1 TRP 100 0.356 101.703 -19.828 1.00308.98 C ATOM 761 NE1 TRP 100 0.011 102.087 -18.556 1.00308.98 N ATOM 762 CE2 TRP 100 -1.070 101.329 -18.143 1.00308.98 C ATOM 763 CE3 TRP 100 -2.440 99.580 -19.071 1.00308.98 C ATOM 764 CZ2 TRP 100 -1.772 101.334 -16.975 1.00308.98 C ATOM 765 CZ3 TRP 100 -3.143 99.582 -17.887 1.00308.98 C ATOM 766 CH2 TRP 100 -2.816 100.442 -16.859 1.00308.98 C ATOM 767 C TRP 100 1.820 99.434 -21.995 1.00308.98 C ATOM 768 O TRP 100 1.955 98.264 -22.353 1.00308.98 O ATOM 769 N GLU 101 2.693 100.013 -21.149 1.00280.79 N ATOM 770 CA GLU 101 3.779 99.199 -20.684 1.00280.79 C ATOM 771 CB GLU 101 5.151 99.583 -21.268 1.00280.79 C ATOM 772 CG GLU 101 6.271 98.640 -20.820 1.00280.79 C ATOM 773 CD GLU 101 7.576 99.094 -21.459 1.00280.79 C ATOM 774 OE1 GLU 101 7.640 99.128 -22.716 1.00280.79 O ATOM 775 OE2 GLU 101 8.528 99.411 -20.695 1.00280.79 O ATOM 776 C GLU 101 3.885 99.311 -19.201 1.00280.79 C ATOM 777 O GLU 101 3.637 100.368 -18.623 1.00280.79 O ATOM 778 N CYS 102 4.234 98.190 -18.540 1.00 83.76 N ATOM 779 CA CYS 102 4.424 98.211 -17.120 1.00 83.76 C ATOM 780 CB CYS 102 3.140 97.941 -16.319 1.00 83.76 C ATOM 781 SG CYS 102 1.910 99.263 -16.519 1.00 83.76 S ATOM 782 C CYS 102 5.391 97.125 -16.782 1.00 83.76 C ATOM 783 O CYS 102 5.403 96.070 -17.416 1.00 83.76 O ATOM 784 N THR 103 6.251 97.368 -15.775 1.00289.71 N ATOM 785 CA THR 103 7.185 96.357 -15.378 1.00289.71 C ATOM 786 CB THR 103 8.597 96.667 -15.783 1.00289.71 C ATOM 787 OG1 THR 103 9.439 95.552 -15.534 1.00289.71 O ATOM 788 CG2 THR 103 9.082 97.889 -14.987 1.00289.71 C ATOM 789 C THR 103 7.162 96.274 -13.885 1.00289.71 C ATOM 790 O THR 103 7.085 97.292 -13.199 1.00289.71 O ATOM 791 N LYS 104 7.202 95.043 -13.338 1.00246.21 N ATOM 792 CA LYS 104 7.247 94.896 -11.913 1.00246.21 C ATOM 793 CB LYS 104 5.921 94.453 -11.268 1.00246.21 C ATOM 794 CG LYS 104 4.849 95.548 -11.287 1.00246.21 C ATOM 795 CD LYS 104 3.472 95.079 -10.813 1.00246.21 C ATOM 796 CE LYS 104 2.767 94.136 -11.788 1.00246.21 C ATOM 797 NZ LYS 104 1.451 93.736 -11.242 1.00246.21 N ATOM 798 C LYS 104 8.274 93.857 -11.606 1.00246.21 C ATOM 799 O LYS 104 8.495 92.938 -12.394 1.00246.21 O ATOM 800 N ASP 105 8.952 93.999 -10.450 1.00215.39 N ATOM 801 CA ASP 105 9.974 93.064 -10.081 1.00215.39 C ATOM 802 CB ASP 105 11.350 93.720 -9.884 1.00215.39 C ATOM 803 CG ASP 105 11.827 94.204 -11.246 1.00215.39 C ATOM 804 OD1 ASP 105 11.491 93.539 -12.262 1.00215.39 O ATOM 805 OD2 ASP 105 12.527 95.251 -11.287 1.00215.39 O ATOM 806 C ASP 105 9.590 92.444 -8.778 1.00215.39 C ATOM 807 O ASP 105 8.681 92.910 -8.093 1.00215.39 O ATOM 808 N ARG 106 10.279 91.345 -8.415 1.00311.03 N ATOM 809 CA ARG 106 10.008 90.693 -7.169 1.00311.03 C ATOM 810 CB ARG 106 9.863 89.166 -7.287 1.00311.03 C ATOM 811 CG ARG 106 11.132 88.452 -7.763 1.00311.03 C ATOM 812 CD ARG 106 11.386 88.534 -9.269 1.00311.03 C ATOM 813 NE ARG 106 12.638 87.773 -9.538 1.00311.03 N ATOM 814 CZ ARG 106 12.576 86.414 -9.642 1.00311.03 C ATOM 815 NH1 ARG 106 11.378 85.778 -9.482 1.00311.03 N ATOM 816 NH2 ARG 106 13.703 85.686 -9.894 1.00311.03 N ATOM 817 C ARG 106 11.189 90.953 -6.293 1.00311.03 C ATOM 818 O ARG 106 12.302 91.149 -6.781 1.00311.03 O ATOM 819 N CYS 107 10.973 90.989 -4.965 1.00 61.64 N ATOM 820 CA CYS 107 12.067 91.239 -4.075 1.00 61.64 C ATOM 821 CB CYS 107 11.752 92.250 -2.961 1.00 61.64 C ATOM 822 SG CYS 107 11.522 93.934 -3.605 1.00 61.64 S ATOM 823 C CYS 107 12.420 89.951 -3.417 1.00 61.64 C ATOM 824 O CYS 107 11.670 88.978 -3.484 1.00 61.64 O ATOM 825 N GLY 108 13.606 89.916 -2.780 1.00127.94 N ATOM 826 CA GLY 108 14.030 88.726 -2.110 1.00127.94 C ATOM 827 C GLY 108 14.274 89.098 -0.690 1.00127.94 C ATOM 828 O GLY 108 14.609 90.241 -0.381 1.00127.94 O ATOM 829 N GLU 109 14.110 88.122 0.220 1.00253.30 N ATOM 830 CA GLU 109 14.304 88.404 1.607 1.00253.30 C ATOM 831 CB GLU 109 13.126 87.942 2.485 1.00253.30 C ATOM 832 CG GLU 109 13.164 88.481 3.916 1.00253.30 C ATOM 833 CD GLU 109 11.796 88.234 4.539 1.00253.30 C ATOM 834 OE1 GLU 109 10.919 87.667 3.833 1.00253.30 O ATOM 835 OE2 GLU 109 11.606 88.611 5.727 1.00253.30 O ATOM 836 C GLU 109 15.537 87.675 2.026 1.00253.30 C ATOM 837 O GLU 109 15.867 86.626 1.475 1.00253.30 O ATOM 838 N VAL 110 16.275 88.238 3.000 1.00 64.63 N ATOM 839 CA VAL 110 17.482 87.604 3.431 1.00 64.63 C ATOM 840 CB VAL 110 18.697 88.472 3.289 1.00 64.63 C ATOM 841 CG1 VAL 110 19.905 87.714 3.866 1.00 64.63 C ATOM 842 CG2 VAL 110 18.851 88.869 1.811 1.00 64.63 C ATOM 843 C VAL 110 17.345 87.296 4.884 1.00 64.63 C ATOM 844 O VAL 110 16.650 87.994 5.621 1.00 64.63 O ATOM 845 N ARG 111 18.000 86.204 5.319 1.00274.86 N ATOM 846 CA ARG 111 17.987 85.835 6.702 1.00274.86 C ATOM 847 CB ARG 111 17.635 84.352 6.927 1.00274.86 C ATOM 848 CG ARG 111 17.606 83.909 8.393 1.00274.86 C ATOM 849 CD ARG 111 18.995 83.761 9.021 1.00274.86 C ATOM 850 NE ARG 111 18.838 83.042 10.315 1.00274.86 N ATOM 851 CZ ARG 111 18.961 81.685 10.331 1.00274.86 C ATOM 852 NH1 ARG 111 19.268 81.027 9.175 1.00274.86 N ATOM 853 NH2 ARG 111 18.793 80.984 11.490 1.00274.86 N ATOM 854 C ARG 111 19.385 86.034 7.186 1.00274.86 C ATOM 855 O ARG 111 20.330 85.479 6.628 1.00274.86 O ATOM 856 N ASN 112 19.557 86.852 8.240 1.00186.50 N ATOM 857 CA ASN 112 20.875 87.066 8.750 1.00186.50 C ATOM 858 CB ASN 112 21.055 88.428 9.445 1.00186.50 C ATOM 859 CG ASN 112 21.043 89.506 8.370 1.00186.50 C ATOM 860 OD1 ASN 112 21.929 89.559 7.518 1.00186.50 O ATOM 861 ND2 ASN 112 20.008 90.388 8.406 1.00186.50 N ATOM 862 C ASN 112 21.124 86.003 9.761 1.00186.50 C ATOM 863 O ASN 112 20.261 85.690 10.579 1.00186.50 O ATOM 864 N GLU 113 22.322 85.393 9.706 1.00271.75 N ATOM 865 CA GLU 113 22.639 84.367 10.650 1.00271.75 C ATOM 866 CB GLU 113 23.638 83.326 10.121 1.00271.75 C ATOM 867 CG GLU 113 25.006 83.930 9.802 1.00271.75 C ATOM 868 CD GLU 113 25.931 82.803 9.367 1.00271.75 C ATOM 869 OE1 GLU 113 25.928 82.467 8.154 1.00271.75 O ATOM 870 OE2 GLU 113 26.650 82.257 10.247 1.00271.75 O ATOM 871 C GLU 113 23.293 85.024 11.821 1.00271.75 C ATOM 872 O GLU 113 23.990 86.027 11.677 1.00271.75 O ATOM 873 N GLU 114 23.060 84.480 13.028 1.00299.54 N ATOM 874 CA GLU 114 23.708 85.008 14.192 1.00299.54 C ATOM 875 CB GLU 114 22.771 85.768 15.145 1.00299.54 C ATOM 876 CG GLU 114 23.498 86.453 16.305 1.00299.54 C ATOM 877 CD GLU 114 22.449 87.131 17.176 1.00299.54 C ATOM 878 OE1 GLU 114 21.240 86.984 16.857 1.00299.54 O ATOM 879 OE2 GLU 114 22.840 87.798 18.171 1.00299.54 O ATOM 880 C GLU 114 24.247 83.828 14.932 1.00299.54 C ATOM 881 O GLU 114 23.689 82.736 14.853 1.00299.54 O ATOM 882 N ASN 115 25.366 84.007 15.661 1.00248.54 N ATOM 883 CA ASN 115 25.916 82.895 16.378 1.00248.54 C ATOM 884 CB ASN 115 27.388 82.603 16.032 1.00248.54 C ATOM 885 CG ASN 115 27.457 82.188 14.569 1.00248.54 C ATOM 886 OD1 ASN 115 28.247 82.727 13.794 1.00248.54 O ATOM 887 ND2 ASN 115 26.607 81.203 14.174 1.00248.54 N ATOM 888 C ASN 115 25.860 83.226 17.834 1.00248.54 C ATOM 889 O ASN 115 25.990 84.385 18.228 1.00248.54 O ATOM 890 N ALA 116 25.632 82.200 18.674 1.00241.93 N ATOM 891 CA ALA 116 25.574 82.435 20.084 1.00241.93 C ATOM 892 CB ALA 116 24.204 82.110 20.704 1.00241.93 C ATOM 893 C ALA 116 26.580 81.537 20.727 1.00241.93 C ATOM 894 O ALA 116 26.798 80.409 20.286 1.00241.93 O ATOM 895 N CYS 117 27.234 82.037 21.792 1.00 78.44 N ATOM 896 CA CYS 117 28.226 81.263 22.476 1.00 78.44 C ATOM 897 CB CYS 117 29.582 81.976 22.604 1.00 78.44 C ATOM 898 SG CYS 117 30.379 82.245 20.992 1.00 78.44 S ATOM 899 C CYS 117 27.712 81.017 23.855 1.00 78.44 C ATOM 900 O CYS 117 26.675 81.553 24.243 1.00 78.44 O ATOM 901 N HIS 118 28.420 80.172 24.629 1.00213.76 N ATOM 902 CA HIS 118 27.951 79.879 25.950 1.00213.76 C ATOM 903 ND1 HIS 118 27.012 77.979 28.540 1.00213.76 N ATOM 904 CG HIS 118 26.536 78.228 27.273 1.00213.76 C ATOM 905 CB HIS 118 27.400 78.447 26.068 1.00213.76 C ATOM 906 NE2 HIS 118 24.793 77.970 28.681 1.00213.76 N ATOM 907 CD2 HIS 118 25.178 78.219 27.377 1.00213.76 C ATOM 908 CE1 HIS 118 25.928 77.832 29.343 1.00213.76 C ATOM 909 C HIS 118 29.115 80.017 26.885 1.00213.76 C ATOM 910 O HIS 118 30.271 79.938 26.468 1.00213.76 O ATOM 911 N CYS 119 28.834 80.258 28.184 1.00106.99 N ATOM 912 CA CYS 119 29.885 80.408 29.152 1.00106.99 C ATOM 913 CB CYS 119 30.014 81.839 29.702 1.00106.99 C ATOM 914 SG CYS 119 28.526 82.364 30.605 1.00106.99 S ATOM 915 C CYS 119 29.574 79.519 30.315 1.00106.99 C ATOM 916 O CYS 119 28.437 79.091 30.498 1.00106.99 O ATOM 917 N SER 120 30.600 79.194 31.127 1.00200.53 N ATOM 918 CA SER 120 30.364 78.354 32.266 1.00200.53 C ATOM 919 CB SER 120 30.623 76.863 32.000 1.00200.53 C ATOM 920 OG SER 120 29.713 76.372 31.028 1.00200.53 O ATOM 921 C SER 120 31.313 78.769 33.342 1.00200.53 C ATOM 922 O SER 120 32.264 79.507 33.089 1.00200.53 O ATOM 923 N GLU 121 31.057 78.316 34.586 1.00296.15 N ATOM 924 CA GLU 121 31.925 78.638 35.682 1.00296.15 C ATOM 925 CB GLU 121 31.279 79.574 36.719 1.00296.15 C ATOM 926 CG GLU 121 30.015 78.986 37.348 1.00296.15 C ATOM 927 CD GLU 121 29.464 79.992 38.348 1.00296.15 C ATOM 928 OE1 GLU 121 30.157 81.008 38.618 1.00296.15 O ATOM 929 OE2 GLU 121 28.336 79.751 38.858 1.00296.15 O ATOM 930 C GLU 121 32.258 77.358 36.384 1.00296.15 C ATOM 931 O GLU 121 31.459 76.423 36.405 1.00296.15 O ATOM 932 N ASP 122 33.476 77.280 36.957 1.00196.42 N ATOM 933 CA ASP 122 33.883 76.099 37.660 1.00196.42 C ATOM 934 CB ASP 122 35.296 75.618 37.291 1.00196.42 C ATOM 935 CG ASP 122 35.258 75.146 35.845 1.00196.42 C ATOM 936 OD1 ASP 122 34.346 75.594 35.101 1.00196.42 O ATOM 937 OD2 ASP 122 36.146 74.339 35.462 1.00196.42 O ATOM 938 C ASP 122 33.884 76.426 39.119 1.00196.42 C ATOM 939 O ASP 122 34.121 77.569 39.505 1.00196.42 O ATOM 940 N CYS 123 33.586 75.428 39.973 1.00110.90 N ATOM 941 CA CYS 123 33.567 75.685 41.385 1.00110.90 C ATOM 942 CB CYS 123 32.171 75.533 42.016 1.00110.90 C ATOM 943 SG CYS 123 32.179 75.860 43.804 1.00110.90 S ATOM 944 C CYS 123 34.464 74.694 42.054 1.00110.90 C ATOM 945 O CYS 123 34.647 73.578 41.573 1.00110.90 O ATOM 946 N LEU 124 35.074 75.102 43.186 1.00284.60 N ATOM 947 CA LEU 124 35.935 74.221 43.922 1.00284.60 C ATOM 948 CB LEU 124 37.432 74.552 43.710 1.00284.60 C ATOM 949 CG LEU 124 38.479 73.641 44.398 1.00284.60 C ATOM 950 CD1 LEU 124 39.897 74.030 43.951 1.00284.60 C ATOM 951 CD2 LEU 124 38.376 73.645 45.931 1.00284.60 C ATOM 952 C LEU 124 35.586 74.394 45.370 1.00284.60 C ATOM 953 O LEU 124 35.290 75.502 45.815 1.00284.60 O ATOM 954 N SER 125 35.586 73.287 46.140 1.00224.81 N ATOM 955 CA SER 125 35.299 73.376 47.543 1.00224.81 C ATOM 956 CB SER 125 33.938 72.773 47.931 1.00224.81 C ATOM 957 OG SER 125 32.890 73.497 47.304 1.00224.81 O ATOM 958 C SER 125 36.360 72.592 48.250 1.00224.81 C ATOM 959 O SER 125 36.985 71.714 47.656 1.00224.81 O ATOM 960 N ARG 126 36.610 72.907 49.538 1.00287.56 N ATOM 961 CA ARG 126 37.632 72.201 50.259 1.00287.56 C ATOM 962 CB ARG 126 38.967 72.956 50.351 1.00287.56 C ATOM 963 CG ARG 126 39.589 73.316 49.003 1.00287.56 C ATOM 964 CD ARG 126 40.943 74.005 49.160 1.00287.56 C ATOM 965 NE ARG 126 40.762 75.101 50.153 1.00287.56 N ATOM 966 CZ ARG 126 41.829 75.862 50.532 1.00287.56 C ATOM 967 NH1 ARG 126 43.055 75.647 49.970 1.00287.56 N ATOM 968 NH2 ARG 126 41.668 76.839 51.470 1.00287.56 N ATOM 969 C ARG 126 37.181 72.038 51.677 1.00287.56 C ATOM 970 O ARG 126 36.169 72.602 52.094 1.00287.56 O ATOM 971 N GLY 127 37.931 71.226 52.452 1.00134.73 N ATOM 972 CA GLY 127 37.642 71.044 53.845 1.00134.73 C ATOM 973 C GLY 127 38.884 70.514 54.494 1.00134.73 C ATOM 974 O GLY 127 39.588 69.684 53.922 1.00134.73 O ATOM 975 N ASP 128 39.190 70.990 55.718 1.00157.36 N ATOM 976 CA ASP 128 40.355 70.512 56.408 1.00157.36 C ATOM 977 CB ASP 128 40.945 71.514 57.418 1.00157.36 C ATOM 978 CG ASP 128 41.639 72.642 56.667 1.00157.36 C ATOM 979 OD1 ASP 128 42.086 72.408 55.512 1.00157.36 O ATOM 980 OD2 ASP 128 41.739 73.756 57.247 1.00157.36 O ATOM 981 C ASP 128 39.977 69.292 57.181 1.00157.36 C ATOM 982 O ASP 128 38.794 68.993 57.366 1.00157.36 O ATOM 983 N CYS 129 40.994 68.537 57.641 1.00 78.91 N ATOM 984 CA CYS 129 40.754 67.379 58.449 1.00 78.91 C ATOM 985 CB CYS 129 41.015 66.045 57.728 1.00 78.91 C ATOM 986 SG CYS 129 40.692 64.609 58.798 1.00 78.91 S ATOM 987 C CYS 129 41.715 67.458 59.590 1.00 78.91 C ATOM 988 O CYS 129 42.766 68.089 59.481 1.00 78.91 O ATOM 989 N CYS 130 41.374 66.836 60.733 1.00 90.10 N ATOM 990 CA CYS 130 42.289 66.898 61.833 1.00 90.10 C ATOM 991 CB CYS 130 41.644 67.319 63.166 1.00 90.10 C ATOM 992 SG CYS 130 40.415 66.121 63.764 1.00 90.10 S ATOM 993 C CYS 130 42.865 65.536 62.030 1.00 90.10 C ATOM 994 O CYS 130 42.145 64.541 62.071 1.00 90.10 O ATOM 995 N THR 131 44.204 65.467 62.134 1.00207.17 N ATOM 996 CA THR 131 44.868 64.223 62.382 1.00207.17 C ATOM 997 CB THR 131 45.644 63.706 61.204 1.00207.17 C ATOM 998 OG1 THR 131 44.778 63.491 60.099 1.00207.17 O ATOM 999 CG2 THR 131 46.334 62.390 61.598 1.00207.17 C ATOM 1000 C THR 131 45.848 64.491 63.473 1.00207.17 C ATOM 1001 O THR 131 46.249 65.633 63.687 1.00207.17 O ATOM 1002 N ASN 132 46.236 63.441 64.220 1.00292.11 N ATOM 1003 CA ASN 132 47.195 63.634 65.264 1.00292.11 C ATOM 1004 CB ASN 132 46.608 63.541 66.679 1.00292.11 C ATOM 1005 CG ASN 132 46.130 62.111 66.886 1.00292.11 C ATOM 1006 OD1 ASN 132 46.672 61.368 67.705 1.00292.11 O ATOM 1007 ND2 ASN 132 45.082 61.707 66.119 1.00292.11 N ATOM 1008 C ASN 132 48.175 62.521 65.155 1.00292.11 C ATOM 1009 O ASN 132 47.892 61.487 64.554 1.00292.11 O ATOM 1010 N TYR 133 49.380 62.724 65.716 1.00277.74 N ATOM 1011 CA TYR 133 50.351 61.676 65.706 1.00277.74 C ATOM 1012 CB TYR 133 51.558 61.970 64.801 1.00277.74 C ATOM 1013 CG TYR 133 51.004 62.064 63.421 1.00277.74 C ATOM 1014 CD1 TYR 133 50.484 63.251 62.962 1.00277.74 C ATOM 1015 CD2 TYR 133 50.992 60.968 62.589 1.00277.74 C ATOM 1016 CE1 TYR 133 49.964 63.346 61.693 1.00277.74 C ATOM 1017 CE2 TYR 133 50.473 61.057 61.318 1.00277.74 C ATOM 1018 CZ TYR 133 49.959 62.249 60.867 1.00277.74 C ATOM 1019 OH TYR 133 49.424 62.346 59.563 1.00277.74 O ATOM 1020 C TYR 133 50.825 61.533 67.113 1.00277.74 C ATOM 1021 O TYR 133 50.935 62.518 67.844 1.00277.74 O ATOM 1022 N GLN 134 51.090 60.286 67.539 1.00264.68 N ATOM 1023 CA GLN 134 51.525 60.078 68.886 1.00264.68 C ATOM 1024 CB GLN 134 50.761 58.958 69.616 1.00264.68 C ATOM 1025 CG GLN 134 51.224 58.730 71.057 1.00264.68 C ATOM 1026 CD GLN 134 50.362 57.627 71.655 1.00264.68 C ATOM 1027 OE1 GLN 134 50.593 56.439 71.435 1.00264.68 O ATOM 1028 NE2 GLN 134 49.327 58.038 72.437 1.00264.68 N ATOM 1029 C GLN 134 52.960 59.682 68.848 1.00264.68 C ATOM 1030 O GLN 134 53.426 59.055 67.896 1.00264.68 O ATOM 1031 N VAL 135 53.710 60.074 69.893 1.00 47.32 N ATOM 1032 CA VAL 135 55.090 59.707 69.971 1.00 47.32 C ATOM 1033 CB VAL 135 55.999 60.847 70.332 1.00 47.32 C ATOM 1034 CG1 VAL 135 57.426 60.299 70.510 1.00 47.32 C ATOM 1035 CG2 VAL 135 55.878 61.927 69.245 1.00 47.32 C ATOM 1036 C VAL 135 55.186 58.699 71.064 1.00 47.32 C ATOM 1037 O VAL 135 54.519 58.817 72.090 1.00 47.32 O ATOM 1038 N VAL 136 56.010 57.657 70.856 1.00 19.28 N ATOM 1039 CA VAL 136 56.122 56.649 71.864 1.00 19.28 C ATOM 1040 CB VAL 136 56.071 55.256 71.313 1.00 19.28 C ATOM 1041 CG1 VAL 136 56.301 54.266 72.467 1.00 19.28 C ATOM 1042 CG2 VAL 136 54.733 55.068 70.579 1.00 19.28 C ATOM 1043 C VAL 136 57.448 56.819 72.526 1.00 19.28 C ATOM 1044 O VAL 136 58.484 56.901 71.869 1.00 19.28 O ATOM 1045 N CYS 137 57.435 56.893 73.869 1.00 43.20 N ATOM 1046 CA CYS 137 58.658 57.022 74.597 1.00 43.20 C ATOM 1047 CB CYS 137 58.600 58.079 75.715 1.00 43.20 C ATOM 1048 SG CYS 137 58.282 59.755 75.081 1.00 43.20 S ATOM 1049 C CYS 137 58.875 55.702 75.251 1.00 43.20 C ATOM 1050 O CYS 137 57.950 55.127 75.822 1.00 43.20 O ATOM 1051 N LYS 138 60.108 55.171 75.164 1.00249.08 N ATOM 1052 CA LYS 138 60.379 53.903 75.773 1.00249.08 C ATOM 1053 CB LYS 138 60.885 52.830 74.793 1.00249.08 C ATOM 1054 CG LYS 138 61.092 51.458 75.439 1.00249.08 C ATOM 1055 CD LYS 138 59.790 50.756 75.829 1.00249.08 C ATOM 1056 CE LYS 138 59.134 51.323 77.090 1.00249.08 C ATOM 1057 NZ LYS 138 57.805 50.704 77.287 1.00249.08 N ATOM 1058 C LYS 138 61.463 54.120 76.770 1.00249.08 C ATOM 1059 O LYS 138 62.145 55.143 76.748 1.00249.08 O ATOM 1060 N GLY 139 61.630 53.159 77.699 1.00142.32 N ATOM 1061 CA GLY 139 62.666 53.289 78.677 1.00142.32 C ATOM 1062 C GLY 139 63.016 51.914 79.138 1.00142.32 C ATOM 1063 O GLY 139 62.188 51.004 79.111 1.00142.32 O ATOM 1064 N GLU 140 64.280 51.731 79.569 1.00286.88 N ATOM 1065 CA GLU 140 64.710 50.455 80.057 1.00286.88 C ATOM 1066 CB GLU 140 65.634 49.687 79.098 1.00286.88 C ATOM 1067 CG GLU 140 66.974 50.392 78.861 1.00286.88 C ATOM 1068 CD GLU 140 67.913 49.400 78.191 1.00286.88 C ATOM 1069 OE1 GLU 140 67.478 48.240 77.961 1.00286.88 O ATOM 1070 OE2 GLU 140 69.078 49.783 77.902 1.00286.88 O ATOM 1071 C GLU 140 65.533 50.710 81.273 1.00286.88 C ATOM 1072 O GLU 140 66.088 51.794 81.442 1.00286.88 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 101.01 30.7 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 109.14 24.2 62 100.0 62 ARMSMC BURIED . . . . . . . . 78.30 46.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 106.82 20.5 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 109.50 16.7 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 111.45 15.4 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 96.91 30.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.11 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 72.50 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 66.63 50.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 119.23 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.23 23.1 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 88.31 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 90.39 20.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 93.96 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 101.37 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 101.37 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 77.16 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 137.56 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 38.51 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 38.51 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.8557 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 41.72 32 100.0 32 CRMSCA BURIED . . . . . . . . 29.12 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 38.41 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 41.67 156 100.0 156 CRMSMC BURIED . . . . . . . . 29.14 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 38.75 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 39.51 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 42.28 112 100.0 112 CRMSSC BURIED . . . . . . . . 29.98 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 38.63 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 42.01 240 100.0 240 CRMSALL BURIED . . . . . . . . 29.49 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 169.933 0.679 0.708 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 169.057 0.644 0.675 32 100.0 32 ERRCA BURIED . . . . . . . . 172.090 0.766 0.787 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 171.446 0.683 0.710 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 171.201 0.648 0.677 156 100.0 156 ERRMC BURIED . . . . . . . . 172.034 0.766 0.787 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 204.043 0.728 0.749 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 209.493 0.731 0.757 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 202.330 0.698 0.721 112 100.0 112 ERRSC BURIED . . . . . . . . 207.661 0.789 0.808 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 186.269 0.703 0.728 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 184.576 0.670 0.697 240 100.0 240 ERRALL BURIED . . . . . . . . 190.139 0.779 0.799 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 2 8 45 45 DISTCA CA (P) 0.00 0.00 2.22 4.44 17.78 45 DISTCA CA (RMS) 0.00 0.00 2.56 3.11 6.34 DISTCA ALL (N) 0 0 5 14 55 345 345 DISTALL ALL (P) 0.00 0.00 1.45 4.06 15.94 345 DISTALL ALL (RMS) 0.00 0.00 2.48 3.56 6.64 DISTALL END of the results output