####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 84 ( 674), selected 84 , name T0540TS476_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 84 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS476_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 65 - 84 4.78 22.59 LONGEST_CONTINUOUS_SEGMENT: 20 66 - 85 4.55 22.77 LONGEST_CONTINUOUS_SEGMENT: 20 67 - 86 4.81 23.08 LCS_AVERAGE: 18.70 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 27 - 35 1.96 17.15 LONGEST_CONTINUOUS_SEGMENT: 9 51 - 59 1.65 17.88 LONGEST_CONTINUOUS_SEGMENT: 9 73 - 81 1.93 17.42 LONGEST_CONTINUOUS_SEGMENT: 9 74 - 82 1.82 17.68 LCS_AVERAGE: 7.92 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 74 - 80 0.96 17.27 LCS_AVERAGE: 5.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 84 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 7 V 7 6 7 19 3 6 6 7 11 13 16 16 17 17 18 19 21 24 25 28 30 38 40 44 LCS_GDT W 8 W 8 6 7 19 4 6 6 7 11 13 16 16 17 17 18 19 25 29 32 35 39 41 44 48 LCS_GDT D 9 D 9 6 8 19 4 6 6 7 11 13 16 16 17 17 18 22 25 29 33 36 39 42 44 48 LCS_GDT V 10 V 10 6 8 19 4 6 6 7 9 13 16 16 17 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT A 11 A 11 6 8 19 4 6 6 7 11 13 16 16 17 17 20 24 26 29 33 36 39 42 44 48 LCS_GDT L 12 L 12 6 8 19 4 6 6 7 11 13 16 16 17 17 18 21 26 28 33 36 39 42 44 48 LCS_GDT S 13 S 13 5 8 19 4 4 5 7 11 13 16 16 17 17 18 21 22 25 28 35 39 41 44 48 LCS_GDT D 14 D 14 4 8 19 4 4 5 6 8 9 11 12 15 17 17 21 22 23 27 28 32 36 41 41 LCS_GDT G 15 G 15 4 8 19 4 4 5 9 10 10 11 12 15 17 17 21 22 26 32 35 39 42 44 48 LCS_GDT V 16 V 16 5 8 19 3 4 4 9 10 10 11 12 15 17 17 21 22 26 32 35 39 42 44 48 LCS_GDT H 17 H 17 6 8 19 3 4 6 9 10 10 11 12 15 17 17 21 22 26 30 35 39 42 44 48 LCS_GDT K 18 K 18 6 8 19 5 5 6 9 10 10 11 12 17 19 21 24 26 28 33 36 39 42 44 48 LCS_GDT I 19 I 19 6 8 19 5 5 6 9 10 10 11 14 18 19 21 24 26 28 33 36 39 42 44 48 LCS_GDT E 20 E 20 6 8 19 5 5 6 9 10 10 11 14 18 19 21 24 26 28 33 36 39 42 44 48 LCS_GDT F 21 F 21 6 8 19 5 5 6 9 10 10 11 14 18 19 21 24 26 28 33 36 39 42 44 48 LCS_GDT E 22 E 22 6 8 19 5 5 6 7 8 9 11 14 18 19 21 24 24 27 30 32 39 42 44 48 LCS_GDT H 23 H 23 6 8 19 3 5 6 7 7 9 11 12 18 19 21 24 24 27 30 32 36 40 44 48 LCS_GDT G 24 G 24 4 8 19 3 3 4 6 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT T 25 T 25 4 4 19 3 3 4 4 5 10 12 13 15 16 19 24 26 29 33 36 39 42 44 48 LCS_GDT T 26 T 26 4 8 19 0 3 4 6 8 11 12 13 15 16 18 20 24 29 33 36 39 42 44 48 LCS_GDT S 27 S 27 3 9 17 0 3 4 5 8 11 11 13 13 16 18 19 23 28 33 36 39 42 44 48 LCS_GDT G 28 G 28 6 9 17 3 5 7 8 8 11 16 16 17 17 18 20 24 29 33 36 39 42 44 48 LCS_GDT K 29 K 29 6 9 14 3 5 7 8 8 12 16 16 17 17 18 19 21 27 31 36 39 42 44 48 LCS_GDT R 30 R 30 6 9 14 5 6 6 8 11 13 16 16 17 17 18 20 25 29 33 36 39 42 44 48 LCS_GDT V 31 V 31 6 9 14 5 6 7 8 11 13 16 16 17 17 18 20 23 29 33 36 39 42 44 48 LCS_GDT V 32 V 32 6 9 14 5 6 7 8 11 13 16 16 17 17 18 21 25 29 33 36 39 42 44 48 LCS_GDT Y 33 Y 33 6 9 14 5 6 7 8 11 13 16 16 17 17 18 20 25 29 33 36 39 42 44 48 LCS_GDT V 34 V 34 6 9 14 5 6 7 8 11 13 16 16 17 17 18 21 26 29 33 36 39 42 44 48 LCS_GDT D 35 D 35 6 9 14 3 6 7 8 8 13 16 16 17 17 18 21 26 29 33 36 39 42 44 48 LCS_GDT G 36 G 36 4 6 14 3 4 5 5 6 8 10 13 15 15 18 20 20 23 26 29 34 38 43 48 LCS_GDT K 37 K 37 4 6 14 3 4 5 5 5 6 8 10 11 13 14 15 16 19 21 25 28 30 35 38 LCS_GDT E 38 E 38 4 6 14 3 4 5 5 5 6 8 10 10 12 12 14 16 17 19 22 23 25 27 31 LCS_GDT E 39 E 39 4 6 14 3 4 4 4 5 6 8 10 10 12 12 14 16 17 19 22 23 25 27 31 LCS_GDT I 40 I 40 4 6 14 3 4 5 5 5 6 9 9 10 12 12 14 14 17 19 22 22 24 27 28 LCS_GDT R 41 R 41 4 6 14 3 3 4 5 5 6 9 10 11 12 14 15 16 17 19 22 22 24 26 28 LCS_GDT K 42 K 42 4 5 14 3 3 4 5 7 8 9 10 11 12 14 15 16 17 18 20 22 24 27 28 LCS_GDT E 43 E 43 4 5 14 3 3 4 5 6 6 9 9 10 12 12 13 14 16 18 20 22 27 27 31 LCS_GDT W 44 W 44 4 6 14 3 3 4 5 6 7 9 9 10 12 12 13 14 15 19 21 23 27 29 31 LCS_GDT M 45 M 45 3 6 14 3 3 4 5 6 7 9 9 10 12 12 13 14 15 19 21 23 27 29 31 LCS_GDT F 46 F 46 5 6 14 4 5 6 6 7 7 9 9 10 12 12 12 14 15 18 21 22 25 29 31 LCS_GDT K 47 K 47 5 6 14 4 5 5 5 6 7 9 9 10 12 12 12 14 16 18 21 24 26 29 31 LCS_GDT L 48 L 48 5 6 14 4 5 5 5 6 7 9 9 10 12 12 12 14 15 17 22 24 26 27 31 LCS_GDT V 49 V 49 5 6 15 4 5 5 5 6 7 7 9 10 12 13 15 16 20 22 28 29 33 34 37 LCS_GDT G 50 G 50 5 6 15 3 5 5 5 6 9 11 13 14 17 18 20 20 24 25 30 35 39 42 47 LCS_GDT K 51 K 51 6 9 15 3 6 6 8 11 13 16 16 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT E 52 E 52 6 9 15 3 6 6 9 10 10 14 16 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT T 53 T 53 6 9 15 3 6 6 9 10 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT F 54 F 54 6 9 15 3 6 6 8 10 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT Y 55 Y 55 6 9 15 3 6 6 8 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT V 56 V 56 6 9 15 3 6 6 8 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT G 57 G 57 4 9 15 3 3 4 8 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT A 58 A 58 3 9 15 3 3 6 8 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT A 59 A 59 4 9 15 3 4 5 6 9 10 12 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT K 60 K 60 4 4 15 3 4 5 5 5 9 12 13 15 17 18 24 26 29 33 36 39 42 44 48 LCS_GDT T 61 T 61 4 4 15 3 4 5 6 9 10 12 13 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT K 62 K 62 4 4 15 3 4 6 7 8 11 12 13 15 16 18 21 26 29 33 36 39 42 44 48 LCS_GDT A 63 A 63 3 4 15 3 4 4 5 7 8 10 13 13 16 17 18 19 21 26 31 37 38 42 45 LCS_GDT T 64 T 64 3 4 18 3 4 4 4 4 5 5 10 11 12 14 15 18 18 20 22 27 27 30 33 LCS_GDT I 65 I 65 3 4 20 3 4 4 4 4 5 5 8 9 10 11 14 15 17 20 22 23 27 29 31 LCS_GDT N 66 N 66 3 5 20 3 3 3 4 5 6 7 11 13 14 14 16 17 17 19 22 23 27 29 31 LCS_GDT I 67 I 67 4 5 20 3 4 6 7 8 10 13 14 15 16 17 18 18 19 20 22 23 27 29 31 LCS_GDT D 68 D 68 4 5 20 3 4 6 7 9 11 13 14 15 16 17 18 18 19 20 22 23 27 29 31 LCS_GDT A 69 A 69 4 5 20 3 4 6 6 8 11 13 14 15 16 17 18 18 19 21 22 23 27 29 31 LCS_GDT I 70 I 70 4 5 20 3 4 6 6 7 11 13 14 15 16 17 18 18 18 20 22 23 27 29 31 LCS_GDT S 71 S 71 4 5 20 3 4 4 6 9 11 13 14 15 16 17 18 18 19 21 22 23 27 29 31 LCS_GDT G 72 G 72 4 5 20 3 4 4 4 5 7 13 14 15 16 17 18 18 19 21 22 23 23 29 31 LCS_GDT F 73 F 73 4 9 20 3 4 4 5 9 11 13 14 15 16 17 18 18 19 21 22 23 23 26 31 LCS_GDT A 74 A 74 7 9 20 4 6 6 7 9 11 13 14 15 16 17 18 18 19 21 22 23 27 29 31 LCS_GDT Y 75 Y 75 7 9 20 4 6 6 7 9 11 13 14 15 16 17 18 18 19 21 22 23 27 29 31 LCS_GDT E 76 E 76 7 9 20 4 6 6 7 9 11 13 14 15 16 17 18 18 19 21 22 23 27 29 31 LCS_GDT Y 77 Y 77 7 9 20 4 6 6 7 9 11 13 14 15 16 17 18 18 19 21 22 24 27 29 32 LCS_GDT T 78 T 78 7 9 20 4 6 6 7 9 11 13 14 15 16 17 18 18 21 22 25 30 34 35 41 LCS_GDT L 79 L 79 7 9 20 4 6 6 7 9 11 13 14 15 16 18 21 25 29 33 36 39 42 44 48 LCS_GDT E 80 E 80 7 9 20 4 5 6 7 9 11 13 14 18 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT I 81 I 81 6 9 20 4 5 6 7 8 11 13 14 18 19 21 24 26 27 33 36 39 42 44 48 LCS_GDT N 82 N 82 5 9 20 3 5 5 7 8 10 12 14 15 16 17 21 23 27 32 35 39 41 44 48 LCS_GDT G 83 G 83 3 8 20 3 3 5 5 7 10 12 12 15 15 17 21 22 27 32 35 39 41 44 48 LCS_GDT K 84 K 84 3 6 20 3 3 5 5 6 7 10 10 11 16 17 18 18 23 25 32 36 39 42 47 LCS_GDT S 85 S 85 3 6 20 3 3 5 5 6 9 10 10 11 13 15 19 22 27 32 35 39 41 44 48 LCS_GDT L 86 L 86 4 6 20 3 4 4 5 6 9 10 10 13 14 17 21 23 27 32 35 39 42 44 48 LCS_GDT K 87 K 87 4 5 11 3 4 4 5 6 9 11 12 15 19 21 24 26 29 33 36 39 42 44 48 LCS_GDT K 88 K 88 4 5 10 3 4 4 5 5 6 11 12 14 16 18 20 23 27 31 36 39 42 44 48 LCS_GDT Y 89 Y 89 4 5 8 3 4 4 5 5 6 8 10 11 11 16 18 19 21 22 22 29 34 35 39 LCS_GDT M 90 M 90 4 5 8 3 3 4 5 5 6 7 7 8 9 10 13 13 15 15 16 18 23 24 24 LCS_AVERAGE LCS_A: 10.69 ( 5.44 7.92 18.70 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 7 9 11 13 16 16 18 19 21 24 26 29 33 36 39 42 44 48 GDT PERCENT_AT 5.56 6.67 7.78 10.00 12.22 14.44 17.78 17.78 20.00 21.11 23.33 26.67 28.89 32.22 36.67 40.00 43.33 46.67 48.89 53.33 GDT RMS_LOCAL 0.39 0.56 1.04 1.59 2.10 2.21 2.50 2.50 3.34 3.40 3.72 4.27 4.91 5.42 5.80 6.05 6.35 6.59 6.73 7.13 GDT RMS_ALL_AT 19.36 18.79 17.71 20.46 18.93 19.00 18.77 18.77 18.98 19.13 18.96 18.72 18.23 17.25 17.67 17.48 17.83 17.82 17.82 18.17 # Checking swapping # possible swapping detected: D 14 D 14 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: D 35 D 35 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 7 V 7 3.005 0 0.283 1.068 5.782 45.476 37.279 LGA W 8 W 8 2.470 0 0.025 1.132 5.032 64.762 56.837 LGA D 9 D 9 2.294 0 0.103 0.342 3.758 57.500 64.167 LGA V 10 V 10 3.069 0 0.112 0.222 4.306 57.262 52.313 LGA A 11 A 11 2.405 0 0.031 0.037 3.267 57.262 57.238 LGA L 12 L 12 2.573 0 0.554 0.578 5.378 55.952 46.310 LGA S 13 S 13 2.281 0 0.136 0.606 6.096 46.548 43.492 LGA D 14 D 14 8.557 0 0.360 0.953 12.713 6.429 3.214 LGA G 15 G 15 9.741 0 0.653 0.653 10.091 1.429 1.429 LGA V 16 V 16 11.147 0 0.586 0.995 14.317 0.000 0.000 LGA H 17 H 17 10.653 0 0.052 1.222 15.838 0.476 0.238 LGA K 18 K 18 12.114 0 0.168 0.829 20.907 0.000 0.000 LGA I 19 I 19 10.340 0 0.043 0.699 11.515 0.000 2.976 LGA E 20 E 20 14.335 0 0.038 1.094 22.914 0.000 0.000 LGA F 21 F 21 13.691 0 0.086 1.172 15.674 0.000 1.732 LGA E 22 E 22 18.637 0 0.174 1.126 26.243 0.000 0.000 LGA H 23 H 23 18.322 0 0.345 0.959 19.282 0.000 0.000 LGA G 24 G 24 17.531 0 0.181 0.181 17.980 0.000 0.000 LGA T 25 T 25 13.126 0 0.720 0.654 15.125 0.000 0.000 LGA T 26 T 26 12.300 0 0.611 0.813 14.894 0.000 0.000 LGA S 27 S 27 10.169 0 0.699 0.603 11.008 5.000 3.333 LGA G 28 G 28 3.450 0 0.720 0.720 5.947 42.857 42.857 LGA K 29 K 29 2.636 0 0.065 1.113 10.152 67.143 42.751 LGA R 30 R 30 2.114 0 0.138 1.155 11.673 64.762 31.039 LGA V 31 V 31 1.733 0 0.104 0.169 1.980 72.857 72.857 LGA V 32 V 32 2.244 0 0.060 1.128 3.237 64.762 61.565 LGA Y 33 Y 33 2.152 0 0.056 0.095 2.528 64.762 63.492 LGA V 34 V 34 1.688 0 0.551 0.930 5.300 57.262 60.068 LGA D 35 D 35 3.031 0 0.128 1.048 7.580 37.857 33.333 LGA G 36 G 36 9.683 0 0.718 0.718 12.211 3.452 3.452 LGA K 37 K 37 14.345 0 0.232 1.267 18.339 0.000 0.000 LGA E 38 E 38 19.241 0 0.147 0.661 27.891 0.000 0.000 LGA E 39 E 39 18.160 0 0.641 1.021 21.380 0.000 0.000 LGA I 40 I 40 24.319 0 0.601 0.900 27.111 0.000 0.000 LGA R 41 R 41 26.527 0 0.241 0.592 34.794 0.000 0.000 LGA K 42 K 42 26.355 0 0.110 0.745 28.118 0.000 0.000 LGA E 43 E 43 27.628 0 0.658 1.508 29.120 0.000 0.000 LGA W 44 W 44 30.107 0 0.216 1.475 38.200 0.000 0.000 LGA M 45 M 45 26.272 0 0.144 0.947 28.029 0.000 0.000 LGA F 46 F 46 26.249 0 0.633 0.821 30.497 0.000 0.000 LGA K 47 K 47 19.987 0 0.142 0.657 22.105 0.000 0.000 LGA L 48 L 48 16.008 0 0.073 0.896 19.845 0.000 0.000 LGA V 49 V 49 10.624 0 0.096 1.094 13.317 0.357 0.204 LGA G 50 G 50 5.148 0 0.084 0.084 6.683 35.000 35.000 LGA K 51 K 51 2.167 0 0.625 0.998 9.526 65.119 37.725 LGA E 52 E 52 5.430 0 0.095 0.972 8.991 27.738 18.254 LGA T 53 T 53 7.993 0 0.051 1.027 12.489 6.190 3.810 LGA F 54 F 54 8.130 0 0.071 1.209 9.397 3.452 10.476 LGA Y 55 Y 55 10.707 0 0.090 1.306 14.532 0.238 0.079 LGA V 56 V 56 9.584 0 0.061 1.204 13.670 0.119 1.088 LGA G 57 G 57 13.272 0 0.592 0.592 14.766 0.000 0.000 LGA A 58 A 58 14.116 0 0.655 0.605 16.200 0.000 0.000 LGA A 59 A 59 19.293 0 0.278 0.281 21.384 0.000 0.000 LGA K 60 K 60 15.339 0 0.377 0.629 16.141 0.000 0.000 LGA T 61 T 61 15.262 0 0.487 1.173 18.459 0.000 0.000 LGA K 62 K 62 14.577 0 0.189 0.225 21.822 0.000 0.000 LGA A 63 A 63 15.714 0 0.151 0.178 17.870 0.000 0.000 LGA T 64 T 64 20.604 0 0.365 0.431 24.331 0.000 0.000 LGA I 65 I 65 21.276 0 0.105 1.009 21.796 0.000 0.000 LGA N 66 N 66 21.901 0 0.545 0.976 26.188 0.000 0.000 LGA I 67 I 67 22.857 0 0.490 1.032 25.153 0.000 0.000 LGA D 68 D 68 29.439 0 0.080 0.452 31.170 0.000 0.000 LGA A 69 A 69 32.516 0 0.069 0.090 35.548 0.000 0.000 LGA I 70 I 70 36.975 0 0.566 1.215 40.098 0.000 0.000 LGA S 71 S 71 40.471 0 0.581 0.967 41.043 0.000 0.000 LGA G 72 G 72 41.653 0 0.379 0.379 41.653 0.000 0.000 LGA F 73 F 73 42.297 0 0.358 1.100 47.713 0.000 0.000 LGA A 74 A 74 39.304 0 0.595 0.593 40.465 0.000 0.000 LGA Y 75 Y 75 32.176 0 0.062 1.410 34.534 0.000 0.000 LGA E 76 E 76 28.322 0 0.065 0.806 34.770 0.000 0.000 LGA Y 77 Y 77 20.992 0 0.065 0.168 24.572 0.000 0.000 LGA T 78 T 78 19.132 0 0.153 1.006 22.426 0.000 0.000 LGA L 79 L 79 13.500 0 0.056 0.095 16.861 0.000 0.595 LGA E 80 E 80 14.609 0 0.093 1.321 16.967 0.000 0.000 LGA I 81 I 81 14.096 0 0.000 1.124 18.337 0.000 0.000 LGA N 82 N 82 16.735 0 0.543 0.717 19.331 0.000 0.000 LGA G 83 G 83 17.404 0 0.674 0.674 19.594 0.000 0.000 LGA K 84 K 84 18.395 0 0.047 0.644 22.742 0.000 0.000 LGA S 85 S 85 16.459 0 0.629 0.553 17.721 0.000 0.000 LGA L 86 L 86 14.838 0 0.606 1.408 16.436 0.000 0.000 LGA K 87 K 87 16.124 0 0.116 1.128 19.346 0.000 0.000 LGA K 88 K 88 17.034 0 0.213 1.399 17.720 0.000 0.000 LGA Y 89 Y 89 21.570 0 0.125 1.210 28.593 0.000 0.000 LGA M 90 M 90 24.477 0 0.381 1.419 27.722 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 84 336 336 100.00 673 673 100.00 90 SUMMARY(RMSD_GDC): 15.537 15.449 16.177 11.245 9.880 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 84 90 4.0 16 2.50 18.611 15.611 0.615 LGA_LOCAL RMSD: 2.502 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.768 Number of assigned atoms: 84 Std_ASGN_ATOMS RMSD: 15.537 Standard rmsd on all 84 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.526455 * X + 0.803643 * Y + 0.277495 * Z + 30.423548 Y_new = -0.248680 * X + 0.166560 * Y + -0.954157 * Z + 55.492928 Z_new = -0.813021 * X + -0.571328 * Y + 0.112163 * Z + 184.818390 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.700295 0.949322 -1.376942 [DEG: -154.7155 54.3922 -78.8930 ] ZXZ: 0.283020 1.458397 -2.183347 [DEG: 16.2159 83.5600 -125.0966 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS476_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS476_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 84 90 4.0 16 2.50 15.611 15.54 REMARK ---------------------------------------------------------- MOLECULE T0540TS476_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2iou_G ATOM 1 N VAL 7 38.535 12.529 -0.694 1.00 0.00 N ATOM 2 CA VAL 7 37.637 13.638 -0.311 1.00 0.00 C ATOM 3 CB VAL 7 38.314 14.526 0.681 1.00 0.00 C ATOM 4 CG1 VAL 7 38.587 13.713 1.958 1.00 0.00 C ATOM 5 CG2 VAL 7 39.579 15.097 0.017 1.00 0.00 C ATOM 6 C VAL 7 37.278 14.453 -1.507 1.00 0.00 C ATOM 7 O VAL 7 37.068 13.917 -2.594 1.00 0.00 O ATOM 8 N TRP 8 37.197 15.786 -1.332 1.00 0.00 N ATOM 9 CA TRP 8 36.816 16.616 -2.431 1.00 0.00 C ATOM 10 CB TRP 8 36.437 18.053 -2.039 1.00 0.00 C ATOM 11 CG TRP 8 35.082 18.148 -1.388 1.00 0.00 C ATOM 12 CD2 TRP 8 33.857 18.113 -2.133 1.00 0.00 C ATOM 13 CD1 TRP 8 34.735 18.254 -0.074 1.00 0.00 C ATOM 14 NE1 TRP 8 33.364 18.297 0.045 1.00 0.00 N ATOM 15 CE2 TRP 8 32.813 18.209 -1.216 1.00 0.00 C ATOM 16 CE3 TRP 8 33.624 18.011 -3.476 1.00 0.00 C ATOM 17 CZ2 TRP 8 31.511 18.203 -1.630 1.00 0.00 C ATOM 18 CZ3 TRP 8 32.311 18.005 -3.891 1.00 0.00 C ATOM 19 CH2 TRP 8 31.275 18.100 -2.984 1.00 0.00 C ATOM 20 C TRP 8 37.920 16.684 -3.425 1.00 0.00 C ATOM 21 O TRP 8 39.086 16.866 -3.081 1.00 0.00 O ATOM 22 N ASP 9 37.552 16.513 -4.707 1.00 0.00 N ATOM 23 CA ASP 9 38.517 16.607 -5.754 1.00 0.00 C ATOM 24 CB ASP 9 38.052 15.972 -7.077 1.00 0.00 C ATOM 25 CG ASP 9 37.977 14.465 -6.877 1.00 0.00 C ATOM 26 OD1 ASP 9 38.591 13.969 -5.896 1.00 0.00 O ATOM 27 OD2 ASP 9 37.308 13.789 -7.705 1.00 0.00 O ATOM 28 C ASP 9 38.730 18.060 -5.996 1.00 0.00 C ATOM 29 O ASP 9 37.810 18.865 -5.852 1.00 0.00 O ATOM 30 N VAL 10 39.969 18.436 -6.352 1.00 0.00 N ATOM 31 CA VAL 10 40.240 19.808 -6.634 1.00 0.00 C ATOM 32 CB VAL 10 41.204 20.458 -5.685 1.00 0.00 C ATOM 33 CG1 VAL 10 40.567 20.534 -4.293 1.00 0.00 C ATOM 34 CG2 VAL 10 42.522 19.668 -5.716 1.00 0.00 C ATOM 35 C VAL 10 40.897 19.843 -7.962 1.00 0.00 C ATOM 36 O VAL 10 41.659 18.942 -8.310 1.00 0.00 O ATOM 37 N ALA 11 40.587 20.882 -8.755 1.00 0.00 N ATOM 38 CA ALA 11 41.274 21.025 -9.997 1.00 0.00 C ATOM 39 CB ALA 11 40.382 21.537 -11.140 1.00 0.00 C ATOM 40 C ALA 11 42.299 22.067 -9.712 1.00 0.00 C ATOM 41 O ALA 11 41.967 23.170 -9.280 1.00 0.00 O ATOM 42 N LEU 12 43.586 21.733 -9.909 1.00 0.00 N ATOM 43 CA LEU 12 44.597 22.690 -9.587 1.00 0.00 C ATOM 44 CB LEU 12 46.020 22.108 -9.670 1.00 0.00 C ATOM 45 CG LEU 12 46.251 20.942 -8.684 1.00 0.00 C ATOM 46 CD1 LEU 12 47.729 20.537 -8.620 1.00 0.00 C ATOM 47 CD2 LEU 12 45.675 21.245 -7.293 1.00 0.00 C ATOM 48 C LEU 12 44.484 23.848 -10.522 1.00 0.00 C ATOM 49 O LEU 12 44.479 25.001 -10.093 1.00 0.00 O ATOM 50 N SER 13 44.367 23.565 -11.832 1.00 0.00 N ATOM 51 CA SER 13 44.308 24.626 -12.790 1.00 0.00 C ATOM 52 CB SER 13 44.282 24.117 -14.242 1.00 0.00 C ATOM 53 OG SER 13 45.488 23.429 -14.543 1.00 0.00 O ATOM 54 C SER 13 43.061 25.423 -12.573 1.00 0.00 C ATOM 55 O SER 13 43.120 26.624 -12.312 1.00 0.00 O ATOM 56 N ASP 14 41.892 24.760 -12.667 1.00 0.00 N ATOM 57 CA ASP 14 40.647 25.466 -12.576 1.00 0.00 C ATOM 58 CB ASP 14 39.438 24.548 -12.838 1.00 0.00 C ATOM 59 CG ASP 14 38.190 25.408 -12.990 1.00 0.00 C ATOM 60 OD1 ASP 14 38.267 26.636 -12.718 1.00 0.00 O ATOM 61 OD2 ASP 14 37.135 24.842 -13.383 1.00 0.00 O ATOM 62 C ASP 14 40.487 26.062 -11.214 1.00 0.00 C ATOM 63 O ASP 14 40.275 27.265 -11.078 1.00 0.00 O ATOM 64 N GLY 15 40.606 25.229 -10.162 1.00 0.00 N ATOM 65 CA GLY 15 40.427 25.721 -8.827 1.00 0.00 C ATOM 66 C GLY 15 38.987 26.121 -8.694 1.00 0.00 C ATOM 67 O GLY 15 38.621 26.881 -7.798 1.00 0.00 O ATOM 68 N VAL 16 38.138 25.611 -9.605 1.00 0.00 N ATOM 69 CA VAL 16 36.752 25.981 -9.679 1.00 0.00 C ATOM 70 CB VAL 16 36.088 25.458 -10.922 1.00 0.00 C ATOM 71 CG1 VAL 16 36.116 23.922 -10.888 1.00 0.00 C ATOM 72 CG2 VAL 16 34.670 26.047 -11.008 1.00 0.00 C ATOM 73 C VAL 16 35.924 25.533 -8.506 1.00 0.00 C ATOM 74 O VAL 16 35.187 26.338 -7.940 1.00 0.00 O ATOM 75 N HIS 17 36.021 24.254 -8.084 1.00 0.00 N ATOM 76 CA HIS 17 35.077 23.799 -7.100 1.00 0.00 C ATOM 77 ND1 HIS 17 33.554 21.772 -4.913 1.00 0.00 N ATOM 78 CG HIS 17 33.697 21.868 -6.279 1.00 0.00 C ATOM 79 CB HIS 17 34.960 22.271 -6.980 1.00 0.00 C ATOM 80 NE2 HIS 17 31.577 21.258 -5.794 1.00 0.00 N ATOM 81 CD2 HIS 17 32.479 21.551 -6.801 1.00 0.00 C ATOM 82 CE1 HIS 17 32.268 21.405 -4.677 1.00 0.00 C ATOM 83 C HIS 17 35.404 24.344 -5.749 1.00 0.00 C ATOM 84 O HIS 17 36.568 24.508 -5.386 1.00 0.00 O ATOM 85 N LYS 18 34.348 24.651 -4.970 1.00 0.00 N ATOM 86 CA LYS 18 34.498 25.161 -3.639 1.00 0.00 C ATOM 87 CB LYS 18 34.240 26.672 -3.526 1.00 0.00 C ATOM 88 CG LYS 18 34.399 27.213 -2.103 1.00 0.00 C ATOM 89 CD LYS 18 34.415 28.740 -2.022 1.00 0.00 C ATOM 90 CE LYS 18 34.344 29.281 -0.592 1.00 0.00 C ATOM 91 NZ LYS 18 34.443 30.757 -0.601 1.00 0.00 N ATOM 92 C LYS 18 33.464 24.490 -2.798 1.00 0.00 C ATOM 93 O LYS 18 32.531 23.879 -3.315 1.00 0.00 O ATOM 94 N ILE 19 33.627 24.555 -1.463 1.00 0.00 N ATOM 95 CA ILE 19 32.625 23.988 -0.613 1.00 0.00 C ATOM 96 CB ILE 19 33.149 22.961 0.345 1.00 0.00 C ATOM 97 CG2 ILE 19 32.004 22.569 1.296 1.00 0.00 C ATOM 98 CG1 ILE 19 33.730 21.776 -0.441 1.00 0.00 C ATOM 99 CD1 ILE 19 32.722 21.148 -1.402 1.00 0.00 C ATOM 100 C ILE 19 32.062 25.109 0.190 1.00 0.00 C ATOM 101 O ILE 19 32.793 25.828 0.869 1.00 0.00 O ATOM 102 N GLU 20 30.731 25.306 0.109 1.00 0.00 N ATOM 103 CA GLU 20 30.140 26.370 0.858 1.00 0.00 C ATOM 104 CB GLU 20 29.771 27.596 0.007 1.00 0.00 C ATOM 105 CG GLU 20 29.144 28.729 0.822 1.00 0.00 C ATOM 106 CD GLU 20 28.824 29.882 -0.119 1.00 0.00 C ATOM 107 OE1 GLU 20 27.806 29.787 -0.856 1.00 0.00 O ATOM 108 OE2 GLU 20 29.599 30.874 -0.115 1.00 0.00 O ATOM 109 C GLU 20 28.872 25.868 1.459 1.00 0.00 C ATOM 110 O GLU 20 28.106 25.145 0.822 1.00 0.00 O ATOM 111 N PHE 21 28.625 26.234 2.729 1.00 0.00 N ATOM 112 CA PHE 21 27.390 25.853 3.341 1.00 0.00 C ATOM 113 CB PHE 21 27.538 24.961 4.583 1.00 0.00 C ATOM 114 CG PHE 21 27.992 23.628 4.095 1.00 0.00 C ATOM 115 CD1 PHE 21 29.330 23.349 3.939 1.00 0.00 C ATOM 116 CD2 PHE 21 27.072 22.655 3.781 1.00 0.00 C ATOM 117 CE1 PHE 21 29.741 22.118 3.485 1.00 0.00 C ATOM 118 CE2 PHE 21 27.476 21.422 3.327 1.00 0.00 C ATOM 119 CZ PHE 21 28.815 21.150 3.179 1.00 0.00 C ATOM 120 C PHE 21 26.694 27.116 3.726 1.00 0.00 C ATOM 121 O PHE 21 27.308 28.060 4.222 1.00 0.00 O ATOM 122 N GLU 22 25.371 27.158 3.489 1.00 0.00 N ATOM 123 CA GLU 22 24.608 28.341 3.743 1.00 0.00 C ATOM 124 CB GLU 22 23.947 28.917 2.479 1.00 0.00 C ATOM 125 CG GLU 22 22.981 27.936 1.807 1.00 0.00 C ATOM 126 CD GLU 22 22.389 28.613 0.576 1.00 0.00 C ATOM 127 OE1 GLU 22 22.735 29.800 0.334 1.00 0.00 O ATOM 128 OE2 GLU 22 21.584 27.955 -0.135 1.00 0.00 O ATOM 129 C GLU 22 23.504 27.976 4.675 1.00 0.00 C ATOM 130 O GLU 22 23.413 26.835 5.128 1.00 0.00 O ATOM 131 N HIS 23 22.642 28.963 4.994 1.00 0.00 N ATOM 132 CA HIS 23 21.536 28.725 5.871 1.00 0.00 C ATOM 133 ND1 HIS 23 18.658 29.086 4.067 1.00 0.00 N ATOM 134 CG HIS 23 19.805 28.319 4.054 1.00 0.00 C ATOM 135 CB HIS 23 20.478 27.774 5.282 1.00 0.00 C ATOM 136 NE2 HIS 23 19.250 28.865 1.933 1.00 0.00 N ATOM 137 CD2 HIS 23 20.152 28.196 2.742 1.00 0.00 C ATOM 138 CE1 HIS 23 18.370 29.383 2.773 1.00 0.00 C ATOM 139 C HIS 23 22.074 28.140 7.134 1.00 0.00 C ATOM 140 O HIS 23 21.621 27.096 7.598 1.00 0.00 O ATOM 141 N GLY 24 23.074 28.823 7.721 1.00 0.00 N ATOM 142 CA GLY 24 23.673 28.363 8.936 1.00 0.00 C ATOM 143 C GLY 24 25.018 27.821 8.593 1.00 0.00 C ATOM 144 O GLY 24 25.260 27.395 7.466 1.00 0.00 O ATOM 145 N THR 25 25.933 27.825 9.581 1.00 0.00 N ATOM 146 CA THR 25 27.265 27.359 9.348 1.00 0.00 C ATOM 147 CB THR 25 28.319 28.363 9.713 1.00 0.00 C ATOM 148 OG1 THR 25 28.250 28.668 11.099 1.00 0.00 O ATOM 149 CG2 THR 25 28.104 29.634 8.875 1.00 0.00 C ATOM 150 C THR 25 27.478 26.165 10.216 1.00 0.00 C ATOM 151 O THR 25 26.814 26.001 11.239 1.00 0.00 O ATOM 152 N THR 26 28.404 25.278 9.808 1.00 0.00 N ATOM 153 CA THR 26 28.653 24.112 10.597 1.00 0.00 C ATOM 154 CB THR 26 28.341 22.825 9.895 1.00 0.00 C ATOM 155 OG1 THR 26 28.416 21.744 10.811 1.00 0.00 O ATOM 156 CG2 THR 26 29.342 22.621 8.743 1.00 0.00 C ATOM 157 C THR 26 30.101 24.091 10.943 1.00 0.00 C ATOM 158 O THR 26 30.931 24.612 10.205 1.00 0.00 O ATOM 159 N SER 27 30.431 23.495 12.102 1.00 0.00 N ATOM 160 CA SER 27 31.796 23.417 12.521 1.00 0.00 C ATOM 161 CB SER 27 32.096 24.231 13.792 1.00 0.00 C ATOM 162 OG SER 27 31.317 23.750 14.878 1.00 0.00 O ATOM 163 C SER 27 32.081 21.983 12.820 1.00 0.00 C ATOM 164 O SER 27 31.176 21.195 13.078 1.00 0.00 O ATOM 165 N GLY 28 33.368 21.600 12.760 1.00 0.00 N ATOM 166 CA GLY 28 33.728 20.242 13.037 1.00 0.00 C ATOM 167 C GLY 28 35.123 20.057 12.541 1.00 0.00 C ATOM 168 O GLY 28 35.664 20.917 11.849 1.00 0.00 O ATOM 169 N LYS 29 35.743 18.912 12.882 1.00 0.00 N ATOM 170 CA LYS 29 37.087 18.692 12.446 1.00 0.00 C ATOM 171 CB LYS 29 37.986 18.057 13.521 1.00 0.00 C ATOM 172 CG LYS 29 38.088 18.885 14.804 1.00 0.00 C ATOM 173 CD LYS 29 36.767 18.944 15.575 1.00 0.00 C ATOM 174 CE LYS 29 36.836 19.758 16.868 1.00 0.00 C ATOM 175 NZ LYS 29 35.516 19.752 17.537 1.00 0.00 N ATOM 176 C LYS 29 37.020 17.719 11.321 1.00 0.00 C ATOM 177 O LYS 29 36.471 16.627 11.462 1.00 0.00 O ATOM 178 N ARG 30 37.573 18.100 10.156 1.00 0.00 N ATOM 179 CA ARG 30 37.552 17.199 9.045 1.00 0.00 C ATOM 180 CB ARG 30 36.412 17.470 8.054 1.00 0.00 C ATOM 181 CG ARG 30 36.357 16.464 6.903 1.00 0.00 C ATOM 182 CD ARG 30 35.064 16.538 6.091 1.00 0.00 C ATOM 183 NE ARG 30 33.953 16.177 7.013 1.00 0.00 N ATOM 184 CZ ARG 30 33.654 14.863 7.229 1.00 0.00 C ATOM 185 NH1 ARG 30 34.376 13.892 6.599 1.00 0.00 N ATOM 186 NH2 ARG 30 32.638 14.523 8.077 1.00 0.00 N ATOM 187 C ARG 30 38.854 17.340 8.325 1.00 0.00 C ATOM 188 O ARG 30 39.593 18.299 8.536 1.00 0.00 O ATOM 189 N VAL 31 39.184 16.360 7.461 1.00 0.00 N ATOM 190 CA VAL 31 40.443 16.435 6.774 1.00 0.00 C ATOM 191 CB VAL 31 41.377 15.314 7.127 1.00 0.00 C ATOM 192 CG1 VAL 31 42.643 15.447 6.269 1.00 0.00 C ATOM 193 CG2 VAL 31 41.639 15.344 8.644 1.00 0.00 C ATOM 194 C VAL 31 40.187 16.357 5.302 1.00 0.00 C ATOM 195 O VAL 31 39.234 15.719 4.860 1.00 0.00 O ATOM 196 N VAL 32 41.037 17.033 4.497 1.00 0.00 N ATOM 197 CA VAL 32 40.843 17.005 3.075 1.00 0.00 C ATOM 198 CB VAL 32 40.541 18.351 2.480 1.00 0.00 C ATOM 199 CG1 VAL 32 39.219 18.871 3.070 1.00 0.00 C ATOM 200 CG2 VAL 32 41.745 19.275 2.724 1.00 0.00 C ATOM 201 C VAL 32 42.105 16.535 2.421 1.00 0.00 C ATOM 202 O VAL 32 43.203 16.929 2.804 1.00 0.00 O ATOM 203 N TYR 33 41.968 15.681 1.389 1.00 0.00 N ATOM 204 CA TYR 33 43.088 15.189 0.639 1.00 0.00 C ATOM 205 CB TYR 33 43.011 13.686 0.319 1.00 0.00 C ATOM 206 CG TYR 33 43.039 12.937 1.607 1.00 0.00 C ATOM 207 CD1 TYR 33 41.884 12.761 2.335 1.00 0.00 C ATOM 208 CD2 TYR 33 44.216 12.407 2.087 1.00 0.00 C ATOM 209 CE1 TYR 33 41.903 12.069 3.522 1.00 0.00 C ATOM 210 CE2 TYR 33 44.240 11.714 3.275 1.00 0.00 C ATOM 211 CZ TYR 33 43.081 11.544 3.995 1.00 0.00 C ATOM 212 OH TYR 33 43.100 10.834 5.213 1.00 0.00 O ATOM 213 C TYR 33 43.021 15.927 -0.658 1.00 0.00 C ATOM 214 O TYR 33 41.957 16.023 -1.266 1.00 0.00 O ATOM 215 N VAL 34 44.160 16.495 -1.101 1.00 0.00 N ATOM 216 CA VAL 34 44.133 17.350 -2.253 1.00 0.00 C ATOM 217 CB VAL 34 45.470 17.974 -2.538 1.00 0.00 C ATOM 218 CG1 VAL 34 45.782 18.967 -1.407 1.00 0.00 C ATOM 219 CG2 VAL 34 46.524 16.860 -2.666 1.00 0.00 C ATOM 220 C VAL 34 43.652 16.665 -3.496 1.00 0.00 C ATOM 221 O VAL 34 42.593 17.025 -3.999 1.00 0.00 O ATOM 222 N ASP 35 44.358 15.626 -3.989 1.00 0.00 N ATOM 223 CA ASP 35 43.976 14.963 -5.213 1.00 0.00 C ATOM 224 CB ASP 35 42.773 14.015 -5.051 1.00 0.00 C ATOM 225 CG ASP 35 43.219 12.817 -4.225 1.00 0.00 C ATOM 226 OD1 ASP 35 44.394 12.817 -3.768 1.00 0.00 O ATOM 227 OD2 ASP 35 42.394 11.880 -4.046 1.00 0.00 O ATOM 228 C ASP 35 43.651 15.968 -6.292 1.00 0.00 C ATOM 229 O ASP 35 42.521 16.005 -6.777 1.00 0.00 O ATOM 230 N GLY 36 44.627 16.821 -6.688 1.00 0.00 N ATOM 231 CA GLY 36 44.405 17.820 -7.706 1.00 0.00 C ATOM 232 C GLY 36 44.833 17.292 -9.046 1.00 0.00 C ATOM 233 O GLY 36 45.123 16.108 -9.200 1.00 0.00 O ATOM 234 N LYS 37 44.888 18.183 -10.063 1.00 0.00 N ATOM 235 CA LYS 37 45.261 17.811 -11.404 1.00 0.00 C ATOM 236 CB LYS 37 44.193 18.125 -12.467 1.00 0.00 C ATOM 237 CG LYS 37 42.895 17.318 -12.348 1.00 0.00 C ATOM 238 CD LYS 37 42.019 17.713 -11.157 1.00 0.00 C ATOM 239 CE LYS 37 40.633 17.064 -11.179 1.00 0.00 C ATOM 240 NZ LYS 37 39.843 17.504 -10.008 1.00 0.00 N ATOM 241 C LYS 37 46.464 18.611 -11.790 1.00 0.00 C ATOM 242 O LYS 37 47.089 19.259 -10.954 1.00 0.00 O ATOM 243 N GLU 38 46.830 18.573 -13.086 1.00 0.00 N ATOM 244 CA GLU 38 47.968 19.300 -13.566 1.00 0.00 C ATOM 245 CB GLU 38 48.201 19.120 -15.073 1.00 0.00 C ATOM 246 CG GLU 38 48.564 17.695 -15.482 1.00 0.00 C ATOM 247 CD GLU 38 48.643 17.676 -17.001 1.00 0.00 C ATOM 248 OE1 GLU 38 48.292 18.716 -17.618 1.00 0.00 O ATOM 249 OE2 GLU 38 49.053 16.627 -17.564 1.00 0.00 O ATOM 250 C GLU 38 47.683 20.745 -13.349 1.00 0.00 C ATOM 251 O GLU 38 46.530 21.167 -13.397 1.00 0.00 O ATOM 252 N GLU 39 48.734 21.545 -13.088 1.00 0.00 N ATOM 253 CA GLU 39 48.508 22.933 -12.823 1.00 0.00 C ATOM 254 CB GLU 39 49.234 23.424 -11.572 1.00 0.00 C ATOM 255 CG GLU 39 48.843 22.691 -10.298 1.00 0.00 C ATOM 256 CD GLU 39 49.773 23.229 -9.230 1.00 0.00 C ATOM 257 OE1 GLU 39 50.257 24.374 -9.434 1.00 0.00 O ATOM 258 OE2 GLU 39 50.017 22.522 -8.215 1.00 0.00 O ATOM 259 C GLU 39 49.093 23.738 -13.932 1.00 0.00 C ATOM 260 O GLU 39 50.231 23.519 -14.344 1.00 0.00 O ATOM 261 N ILE 40 48.305 24.695 -14.453 1.00 0.00 N ATOM 262 CA ILE 40 48.806 25.592 -15.449 1.00 0.00 C ATOM 263 CB ILE 40 47.742 26.503 -15.985 1.00 0.00 C ATOM 264 CG2 ILE 40 48.419 27.528 -16.911 1.00 0.00 C ATOM 265 CG1 ILE 40 46.634 25.684 -16.665 1.00 0.00 C ATOM 266 CD1 ILE 40 47.129 24.835 -17.835 1.00 0.00 C ATOM 267 C ILE 40 49.832 26.451 -14.784 1.00 0.00 C ATOM 268 O ILE 40 50.929 26.651 -15.304 1.00 0.00 O ATOM 269 N ARG 41 49.488 26.975 -13.591 1.00 0.00 N ATOM 270 CA ARG 41 50.369 27.834 -12.854 1.00 0.00 C ATOM 271 CB ARG 41 50.336 29.304 -13.307 1.00 0.00 C ATOM 272 CG ARG 41 48.951 29.949 -13.217 1.00 0.00 C ATOM 273 CD ARG 41 48.965 31.460 -13.461 1.00 0.00 C ATOM 274 NE ARG 41 49.757 31.711 -14.697 1.00 0.00 N ATOM 275 CZ ARG 41 50.030 32.994 -15.081 1.00 0.00 C ATOM 276 NH1 ARG 41 49.545 34.041 -14.352 1.00 0.00 N ATOM 277 NH2 ARG 41 50.787 33.227 -16.192 1.00 0.00 N ATOM 278 C ARG 41 49.930 27.805 -11.426 1.00 0.00 C ATOM 279 O ARG 41 49.184 26.920 -11.010 1.00 0.00 O ATOM 280 N LYS 42 50.415 28.775 -10.625 1.00 0.00 N ATOM 281 CA LYS 42 50.024 28.835 -9.248 1.00 0.00 C ATOM 282 CB LYS 42 50.628 30.028 -8.486 1.00 0.00 C ATOM 283 CG LYS 42 50.224 30.094 -7.012 1.00 0.00 C ATOM 284 CD LYS 42 51.044 31.094 -6.194 1.00 0.00 C ATOM 285 CE LYS 42 52.457 30.607 -5.863 1.00 0.00 C ATOM 286 NZ LYS 42 53.205 31.673 -5.155 1.00 0.00 N ATOM 287 C LYS 42 48.545 28.983 -9.228 1.00 0.00 C ATOM 288 O LYS 42 47.970 29.670 -10.067 1.00 0.00 O ATOM 289 N GLU 43 47.888 28.323 -8.260 1.00 0.00 N ATOM 290 CA GLU 43 46.461 28.360 -8.216 1.00 0.00 C ATOM 291 CB GLU 43 45.832 27.361 -7.236 1.00 0.00 C ATOM 292 CG GLU 43 45.977 25.901 -7.658 1.00 0.00 C ATOM 293 CD GLU 43 45.301 25.065 -6.582 1.00 0.00 C ATOM 294 OE1 GLU 43 45.051 25.612 -5.474 1.00 0.00 O ATOM 295 OE2 GLU 43 45.018 23.871 -6.860 1.00 0.00 O ATOM 296 C GLU 43 46.014 29.705 -7.777 1.00 0.00 C ATOM 297 O GLU 43 46.694 30.391 -7.018 1.00 0.00 O ATOM 298 N TRP 44 44.829 30.101 -8.273 1.00 0.00 N ATOM 299 CA TRP 44 44.222 31.336 -7.896 1.00 0.00 C ATOM 300 CB TRP 44 42.985 31.692 -8.742 1.00 0.00 C ATOM 301 CG TRP 44 42.395 33.056 -8.462 1.00 0.00 C ATOM 302 CD2 TRP 44 42.797 34.250 -9.151 1.00 0.00 C ATOM 303 CD1 TRP 44 41.432 33.432 -7.571 1.00 0.00 C ATOM 304 NE1 TRP 44 41.216 34.787 -7.655 1.00 0.00 N ATOM 305 CE2 TRP 44 42.049 35.303 -8.625 1.00 0.00 C ATOM 306 CE3 TRP 44 43.716 34.451 -10.141 1.00 0.00 C ATOM 307 CZ2 TRP 44 42.213 36.580 -9.082 1.00 0.00 C ATOM 308 CZ3 TRP 44 43.878 35.738 -10.601 1.00 0.00 C ATOM 309 CH2 TRP 44 43.141 36.783 -10.080 1.00 0.00 C ATOM 310 C TRP 44 43.778 31.097 -6.495 1.00 0.00 C ATOM 311 O TRP 44 43.960 29.993 -5.981 1.00 0.00 O ATOM 312 N MET 45 43.238 32.135 -5.829 1.00 0.00 N ATOM 313 CA MET 45 42.818 31.978 -4.467 1.00 0.00 C ATOM 314 CB MET 45 42.035 33.188 -3.925 1.00 0.00 C ATOM 315 CG MET 45 42.839 34.488 -3.865 1.00 0.00 C ATOM 316 SD MET 45 41.871 35.915 -3.287 1.00 0.00 S ATOM 317 CE MET 45 43.182 37.132 -3.601 1.00 0.00 C ATOM 318 C MET 45 41.875 30.826 -4.434 1.00 0.00 C ATOM 319 O MET 45 40.818 30.848 -5.063 1.00 0.00 O ATOM 320 N PHE 46 42.263 29.762 -3.707 1.00 0.00 N ATOM 321 CA PHE 46 41.400 28.628 -3.657 1.00 0.00 C ATOM 322 CB PHE 46 42.083 27.337 -4.133 1.00 0.00 C ATOM 323 CG PHE 46 41.040 26.282 -4.210 1.00 0.00 C ATOM 324 CD1 PHE 46 40.682 25.569 -3.091 1.00 0.00 C ATOM 325 CD2 PHE 46 40.417 26.011 -5.407 1.00 0.00 C ATOM 326 CE1 PHE 46 39.717 24.595 -3.167 1.00 0.00 C ATOM 327 CE2 PHE 46 39.452 25.038 -5.489 1.00 0.00 C ATOM 328 CZ PHE 46 39.103 24.328 -4.365 1.00 0.00 C ATOM 329 C PHE 46 41.015 28.444 -2.230 1.00 0.00 C ATOM 330 O PHE 46 41.871 28.240 -1.370 1.00 0.00 O ATOM 331 N LYS 47 39.704 28.534 -1.939 1.00 0.00 N ATOM 332 CA LYS 47 39.275 28.322 -0.590 1.00 0.00 C ATOM 333 CB LYS 47 38.426 29.468 -0.012 1.00 0.00 C ATOM 334 CG LYS 47 37.222 29.860 -0.869 1.00 0.00 C ATOM 335 CD LYS 47 37.604 30.402 -2.249 1.00 0.00 C ATOM 336 CE LYS 47 36.416 30.963 -3.034 1.00 0.00 C ATOM 337 NZ LYS 47 36.038 32.288 -2.491 1.00 0.00 N ATOM 338 C LYS 47 38.466 27.069 -0.588 1.00 0.00 C ATOM 339 O LYS 47 37.417 26.989 -1.226 1.00 0.00 O ATOM 340 N LEU 48 38.975 26.037 0.110 1.00 0.00 N ATOM 341 CA LEU 48 38.335 24.756 0.146 1.00 0.00 C ATOM 342 CB LEU 48 39.159 23.690 0.899 1.00 0.00 C ATOM 343 CG LEU 48 40.521 23.350 0.274 1.00 0.00 C ATOM 344 CD1 LEU 48 40.371 22.627 -1.073 1.00 0.00 C ATOM 345 CD2 LEU 48 41.405 24.600 0.192 1.00 0.00 C ATOM 346 C LEU 48 37.038 24.811 0.884 1.00 0.00 C ATOM 347 O LEU 48 36.011 24.367 0.370 1.00 0.00 O ATOM 348 N VAL 49 37.038 25.386 2.104 1.00 0.00 N ATOM 349 CA VAL 49 35.869 25.227 2.924 1.00 0.00 C ATOM 350 CB VAL 49 36.024 24.002 3.813 1.00 0.00 C ATOM 351 CG1 VAL 49 34.801 23.764 4.715 1.00 0.00 C ATOM 352 CG2 VAL 49 36.345 22.798 2.913 1.00 0.00 C ATOM 353 C VAL 49 35.705 26.473 3.761 1.00 0.00 C ATOM 354 O VAL 49 36.534 27.380 3.715 1.00 0.00 O ATOM 355 N GLY 50 34.592 26.549 4.530 1.00 0.00 N ATOM 356 CA GLY 50 34.224 27.674 5.343 1.00 0.00 C ATOM 357 C GLY 50 34.597 27.454 6.783 1.00 0.00 C ATOM 358 O GLY 50 35.733 27.116 7.112 1.00 0.00 O ATOM 359 N LYS 51 33.600 27.652 7.672 1.00 0.00 N ATOM 360 CA LYS 51 33.705 27.681 9.108 1.00 0.00 C ATOM 361 CB LYS 51 32.370 28.039 9.789 1.00 0.00 C ATOM 362 CG LYS 51 31.177 27.194 9.338 1.00 0.00 C ATOM 363 CD LYS 51 30.801 27.371 7.865 1.00 0.00 C ATOM 364 CE LYS 51 29.650 26.474 7.408 1.00 0.00 C ATOM 365 NZ LYS 51 29.337 26.757 5.991 1.00 0.00 N ATOM 366 C LYS 51 34.228 26.410 9.704 1.00 0.00 C ATOM 367 O LYS 51 34.992 26.471 10.667 1.00 0.00 O ATOM 368 N GLU 52 33.851 25.226 9.188 1.00 0.00 N ATOM 369 CA GLU 52 34.368 24.030 9.799 1.00 0.00 C ATOM 370 CB GLU 52 33.882 22.718 9.156 1.00 0.00 C ATOM 371 CG GLU 52 32.392 22.449 9.366 1.00 0.00 C ATOM 372 CD GLU 52 32.038 21.123 8.707 1.00 0.00 C ATOM 373 OE1 GLU 52 32.432 20.915 7.528 1.00 0.00 O ATOM 374 OE2 GLU 52 31.365 20.297 9.381 1.00 0.00 O ATOM 375 C GLU 52 35.855 24.081 9.650 1.00 0.00 C ATOM 376 O GLU 52 36.371 24.830 8.822 1.00 0.00 O ATOM 377 N THR 53 36.591 23.317 10.486 1.00 0.00 N ATOM 378 CA THR 53 38.025 23.366 10.424 1.00 0.00 C ATOM 379 CB THR 53 38.679 23.410 11.772 1.00 0.00 C ATOM 380 OG1 THR 53 40.062 23.701 11.635 1.00 0.00 O ATOM 381 CG2 THR 53 38.484 22.046 12.454 1.00 0.00 C ATOM 382 C THR 53 38.517 22.137 9.728 1.00 0.00 C ATOM 383 O THR 53 37.936 21.061 9.859 1.00 0.00 O ATOM 384 N PHE 54 39.606 22.281 8.941 1.00 0.00 N ATOM 385 CA PHE 54 40.126 21.163 8.212 1.00 0.00 C ATOM 386 CB PHE 54 39.794 21.180 6.707 1.00 0.00 C ATOM 387 CG PHE 54 38.339 20.936 6.498 1.00 0.00 C ATOM 388 CD1 PHE 54 37.433 21.955 6.667 1.00 0.00 C ATOM 389 CD2 PHE 54 37.886 19.697 6.102 1.00 0.00 C ATOM 390 CE1 PHE 54 36.092 21.735 6.463 1.00 0.00 C ATOM 391 CE2 PHE 54 36.546 19.473 5.895 1.00 0.00 C ATOM 392 CZ PHE 54 35.646 20.494 6.078 1.00 0.00 C ATOM 393 C PHE 54 41.622 21.177 8.293 1.00 0.00 C ATOM 394 O PHE 54 42.240 22.202 8.582 1.00 0.00 O ATOM 395 N TYR 55 42.238 19.999 8.055 1.00 0.00 N ATOM 396 CA TYR 55 43.668 19.858 8.052 1.00 0.00 C ATOM 397 CB TYR 55 44.158 19.088 9.292 1.00 0.00 C ATOM 398 CG TYR 55 45.618 19.301 9.502 1.00 0.00 C ATOM 399 CD1 TYR 55 46.076 20.530 9.919 1.00 0.00 C ATOM 400 CD2 TYR 55 46.520 18.278 9.328 1.00 0.00 C ATOM 401 CE1 TYR 55 47.417 20.748 10.135 1.00 0.00 C ATOM 402 CE2 TYR 55 47.863 18.490 9.544 1.00 0.00 C ATOM 403 CZ TYR 55 48.312 19.725 9.946 1.00 0.00 C ATOM 404 OH TYR 55 49.688 19.944 10.171 1.00 0.00 O ATOM 405 C TYR 55 43.956 19.045 6.822 1.00 0.00 C ATOM 406 O TYR 55 43.157 18.182 6.461 1.00 0.00 O ATOM 407 N VAL 56 45.089 19.281 6.123 1.00 0.00 N ATOM 408 CA VAL 56 45.256 18.516 4.916 1.00 0.00 C ATOM 409 CB VAL 56 46.227 19.068 3.904 1.00 0.00 C ATOM 410 CG1 VAL 56 45.798 20.503 3.551 1.00 0.00 C ATOM 411 CG2 VAL 56 47.669 18.915 4.399 1.00 0.00 C ATOM 412 C VAL 56 45.636 17.108 5.261 1.00 0.00 C ATOM 413 O VAL 56 46.483 16.850 6.116 1.00 0.00 O ATOM 414 N GLY 57 44.985 16.169 4.548 1.00 0.00 N ATOM 415 CA GLY 57 45.032 14.743 4.692 1.00 0.00 C ATOM 416 C GLY 57 46.384 14.191 4.406 1.00 0.00 C ATOM 417 O GLY 57 46.760 13.191 5.016 1.00 0.00 O ATOM 418 N ALA 58 47.125 14.787 3.446 1.00 0.00 N ATOM 419 CA ALA 58 48.417 14.258 3.111 1.00 0.00 C ATOM 420 CB ALA 58 49.204 15.110 2.101 1.00 0.00 C ATOM 421 C ALA 58 49.211 14.195 4.378 1.00 0.00 C ATOM 422 O ALA 58 49.087 15.055 5.248 1.00 0.00 O ATOM 423 N ALA 59 50.048 13.151 4.518 1.00 0.00 N ATOM 424 CA ALA 59 50.706 12.927 5.772 1.00 0.00 C ATOM 425 CB ALA 59 51.637 11.701 5.743 1.00 0.00 C ATOM 426 C ALA 59 51.542 14.110 6.119 1.00 0.00 C ATOM 427 O ALA 59 51.483 14.625 7.232 1.00 0.00 O ATOM 428 N LYS 60 52.312 14.614 5.151 1.00 0.00 N ATOM 429 CA LYS 60 53.195 15.695 5.454 1.00 0.00 C ATOM 430 CB LYS 60 54.151 16.029 4.308 1.00 0.00 C ATOM 431 CG LYS 60 55.312 15.037 4.248 1.00 0.00 C ATOM 432 CD LYS 60 56.203 15.095 5.493 1.00 0.00 C ATOM 433 CE LYS 60 57.314 14.044 5.517 1.00 0.00 C ATOM 434 NZ LYS 60 56.742 12.709 5.806 1.00 0.00 N ATOM 435 C LYS 60 52.413 16.906 5.836 1.00 0.00 C ATOM 436 O LYS 60 52.930 17.739 6.576 1.00 0.00 O ATOM 437 N THR 61 51.178 17.048 5.302 1.00 0.00 N ATOM 438 CA THR 61 50.291 18.164 5.526 1.00 0.00 C ATOM 439 CB THR 61 49.790 18.334 6.950 1.00 0.00 C ATOM 440 OG1 THR 61 48.660 19.193 6.969 1.00 0.00 O ATOM 441 CG2 THR 61 50.868 18.964 7.845 1.00 0.00 C ATOM 442 C THR 61 51.032 19.377 5.095 1.00 0.00 C ATOM 443 O THR 61 50.754 20.496 5.516 1.00 0.00 O ATOM 444 N LYS 62 51.995 19.149 4.185 1.00 0.00 N ATOM 445 CA LYS 62 52.859 20.166 3.678 1.00 0.00 C ATOM 446 CB LYS 62 54.164 20.285 4.490 1.00 0.00 C ATOM 447 CG LYS 62 55.133 21.359 3.996 1.00 0.00 C ATOM 448 CD LYS 62 56.399 21.485 4.846 1.00 0.00 C ATOM 449 CE LYS 62 57.479 22.359 4.205 1.00 0.00 C ATOM 450 NZ LYS 62 58.685 22.389 5.064 1.00 0.00 N ATOM 451 C LYS 62 53.243 19.727 2.306 1.00 0.00 C ATOM 452 O LYS 62 52.915 18.616 1.898 1.00 0.00 O ATOM 453 N ALA 63 53.950 20.594 1.558 1.00 0.00 N ATOM 454 CA ALA 63 54.348 20.233 0.232 1.00 0.00 C ATOM 455 CB ALA 63 55.260 21.290 -0.415 1.00 0.00 C ATOM 456 C ALA 63 55.142 18.974 0.336 1.00 0.00 C ATOM 457 O ALA 63 56.256 18.975 0.856 1.00 0.00 O ATOM 458 N THR 64 54.571 17.870 -0.186 1.00 0.00 N ATOM 459 CA THR 64 55.209 16.589 -0.149 1.00 0.00 C ATOM 460 CB THR 64 55.170 15.941 1.208 1.00 0.00 C ATOM 461 OG1 THR 64 55.735 16.824 2.163 1.00 0.00 O ATOM 462 CG2 THR 64 56.016 14.654 1.187 1.00 0.00 C ATOM 463 C THR 64 54.459 15.732 -1.121 1.00 0.00 C ATOM 464 O THR 64 54.398 16.032 -2.312 1.00 0.00 O ATOM 465 N ILE 65 53.869 14.626 -0.628 1.00 0.00 N ATOM 466 CA ILE 65 53.136 13.715 -1.452 1.00 0.00 C ATOM 467 CB ILE 65 53.574 12.287 -1.278 1.00 0.00 C ATOM 468 CG2 ILE 65 53.284 11.872 0.173 1.00 0.00 C ATOM 469 CG1 ILE 65 52.944 11.377 -2.345 1.00 0.00 C ATOM 470 CD1 ILE 65 53.589 9.992 -2.419 1.00 0.00 C ATOM 471 C ILE 65 51.706 13.822 -1.038 1.00 0.00 C ATOM 472 O ILE 65 51.403 14.025 0.136 1.00 0.00 O ATOM 473 N ASN 66 50.782 13.705 -2.012 1.00 0.00 N ATOM 474 CA ASN 66 49.390 13.887 -1.718 1.00 0.00 C ATOM 475 CB ASN 66 48.922 13.036 -0.524 1.00 0.00 C ATOM 476 CG ASN 66 49.131 11.570 -0.882 1.00 0.00 C ATOM 477 OD1 ASN 66 49.523 10.766 -0.036 1.00 0.00 O ATOM 478 ND2 ASN 66 48.870 11.211 -2.167 1.00 0.00 N ATOM 479 C ASN 66 49.259 15.326 -1.343 1.00 0.00 C ATOM 480 O ASN 66 48.307 15.742 -0.684 1.00 0.00 O ATOM 481 N ILE 67 50.248 16.115 -1.796 1.00 0.00 N ATOM 482 CA ILE 67 50.370 17.515 -1.563 1.00 0.00 C ATOM 483 CB ILE 67 51.342 17.814 -0.469 1.00 0.00 C ATOM 484 CG2 ILE 67 51.609 19.326 -0.450 1.00 0.00 C ATOM 485 CG1 ILE 67 50.778 17.267 0.852 1.00 0.00 C ATOM 486 CD1 ILE 67 49.460 17.924 1.258 1.00 0.00 C ATOM 487 C ILE 67 50.883 18.091 -2.838 1.00 0.00 C ATOM 488 O ILE 67 50.119 18.582 -3.666 1.00 0.00 O ATOM 489 N ASP 68 52.217 18.051 -3.012 1.00 0.00 N ATOM 490 CA ASP 68 52.824 18.585 -4.195 1.00 0.00 C ATOM 491 CB ASP 68 54.326 18.273 -4.294 1.00 0.00 C ATOM 492 CG ASP 68 54.992 18.996 -3.141 1.00 0.00 C ATOM 493 OD1 ASP 68 54.280 19.808 -2.498 1.00 0.00 O ATOM 494 OD2 ASP 68 56.203 18.753 -2.886 1.00 0.00 O ATOM 495 C ASP 68 52.174 17.931 -5.362 1.00 0.00 C ATOM 496 O ASP 68 52.145 16.706 -5.469 1.00 0.00 O ATOM 497 N ALA 69 51.613 18.746 -6.273 1.00 0.00 N ATOM 498 CA ALA 69 50.999 18.157 -7.419 1.00 0.00 C ATOM 499 CB ALA 69 50.326 19.171 -8.354 1.00 0.00 C ATOM 500 C ALA 69 52.099 17.531 -8.193 1.00 0.00 C ATOM 501 O ALA 69 53.134 18.155 -8.423 1.00 0.00 O ATOM 502 N ILE 70 51.895 16.277 -8.631 1.00 0.00 N ATOM 503 CA ILE 70 52.926 15.622 -9.370 1.00 0.00 C ATOM 504 CB ILE 70 52.586 14.187 -9.706 1.00 0.00 C ATOM 505 CG2 ILE 70 51.395 14.165 -10.675 1.00 0.00 C ATOM 506 CG1 ILE 70 53.828 13.421 -10.202 1.00 0.00 C ATOM 507 CD1 ILE 70 54.414 13.937 -11.517 1.00 0.00 C ATOM 508 C ILE 70 53.116 16.424 -10.614 1.00 0.00 C ATOM 509 O ILE 70 54.240 16.678 -11.041 1.00 0.00 O ATOM 510 N SER 71 51.996 16.863 -11.213 1.00 0.00 N ATOM 511 CA SER 71 52.060 17.633 -12.411 1.00 0.00 C ATOM 512 CB SER 71 50.671 18.002 -12.952 1.00 0.00 C ATOM 513 OG SER 71 50.809 18.766 -14.140 1.00 0.00 O ATOM 514 C SER 71 52.779 18.903 -12.098 1.00 0.00 C ATOM 515 O SER 71 53.554 19.399 -12.914 1.00 0.00 O ATOM 516 N GLY 72 52.564 19.464 -10.893 1.00 0.00 N ATOM 517 CA GLY 72 53.210 20.714 -10.638 1.00 0.00 C ATOM 518 C GLY 72 54.266 20.527 -9.604 1.00 0.00 C ATOM 519 O GLY 72 54.001 20.538 -8.402 1.00 0.00 O ATOM 520 N PHE 73 55.515 20.371 -10.072 1.00 0.00 N ATOM 521 CA PHE 73 56.642 20.260 -9.200 1.00 0.00 C ATOM 522 CB PHE 73 57.947 20.005 -9.971 1.00 0.00 C ATOM 523 CG PHE 73 59.073 20.065 -8.997 1.00 0.00 C ATOM 524 CD1 PHE 73 59.469 18.944 -8.305 1.00 0.00 C ATOM 525 CD2 PHE 73 59.732 21.253 -8.778 1.00 0.00 C ATOM 526 CE1 PHE 73 60.509 19.009 -7.407 1.00 0.00 C ATOM 527 CE2 PHE 73 60.771 21.323 -7.882 1.00 0.00 C ATOM 528 CZ PHE 73 61.161 20.200 -7.193 1.00 0.00 C ATOM 529 C PHE 73 56.783 21.579 -8.520 1.00 0.00 C ATOM 530 O PHE 73 57.031 21.660 -7.318 1.00 0.00 O ATOM 531 N ALA 74 56.603 22.655 -9.307 1.00 0.00 N ATOM 532 CA ALA 74 56.789 24.000 -8.857 1.00 0.00 C ATOM 533 CB ALA 74 56.581 25.036 -9.974 1.00 0.00 C ATOM 534 C ALA 74 55.821 24.327 -7.770 1.00 0.00 C ATOM 535 O ALA 74 56.176 25.005 -6.807 1.00 0.00 O ATOM 536 N TYR 75 54.572 23.845 -7.874 1.00 0.00 N ATOM 537 CA TYR 75 53.606 24.291 -6.917 1.00 0.00 C ATOM 538 CB TYR 75 52.198 24.421 -7.509 1.00 0.00 C ATOM 539 CG TYR 75 51.373 25.240 -6.583 1.00 0.00 C ATOM 540 CD1 TYR 75 51.421 26.611 -6.681 1.00 0.00 C ATOM 541 CD2 TYR 75 50.560 24.663 -5.635 1.00 0.00 C ATOM 542 CE1 TYR 75 50.673 27.401 -5.844 1.00 0.00 C ATOM 543 CE2 TYR 75 49.807 25.449 -4.793 1.00 0.00 C ATOM 544 CZ TYR 75 49.866 26.818 -4.898 1.00 0.00 C ATOM 545 OH TYR 75 49.097 27.631 -4.039 1.00 0.00 O ATOM 546 C TYR 75 53.527 23.318 -5.787 1.00 0.00 C ATOM 547 O TYR 75 53.504 22.104 -5.983 1.00 0.00 O ATOM 548 N GLU 76 53.507 23.862 -4.554 1.00 0.00 N ATOM 549 CA GLU 76 53.397 23.075 -3.360 1.00 0.00 C ATOM 550 CB GLU 76 54.485 23.400 -2.325 1.00 0.00 C ATOM 551 CG GLU 76 55.896 23.048 -2.795 1.00 0.00 C ATOM 552 CD GLU 76 56.868 23.532 -1.730 1.00 0.00 C ATOM 553 OE1 GLU 76 56.391 23.944 -0.639 1.00 0.00 O ATOM 554 OE2 GLU 76 58.100 23.501 -1.994 1.00 0.00 O ATOM 555 C GLU 76 52.095 23.458 -2.742 1.00 0.00 C ATOM 556 O GLU 76 51.625 24.577 -2.930 1.00 0.00 O ATOM 557 N TYR 77 51.458 22.531 -1.999 1.00 0.00 N ATOM 558 CA TYR 77 50.200 22.892 -1.418 1.00 0.00 C ATOM 559 CB TYR 77 49.010 22.043 -1.895 1.00 0.00 C ATOM 560 CG TYR 77 48.698 22.395 -3.307 1.00 0.00 C ATOM 561 CD1 TYR 77 49.356 21.788 -4.351 1.00 0.00 C ATOM 562 CD2 TYR 77 47.736 23.338 -3.583 1.00 0.00 C ATOM 563 CE1 TYR 77 49.061 22.116 -5.652 1.00 0.00 C ATOM 564 CE2 TYR 77 47.435 23.671 -4.882 1.00 0.00 C ATOM 565 CZ TYR 77 48.098 23.059 -5.918 1.00 0.00 C ATOM 566 OH TYR 77 47.789 23.402 -7.250 1.00 0.00 O ATOM 567 C TYR 77 50.255 22.718 0.062 1.00 0.00 C ATOM 568 O TYR 77 50.779 21.731 0.577 1.00 0.00 O ATOM 569 N THR 78 49.723 23.722 0.781 1.00 0.00 N ATOM 570 CA THR 78 49.594 23.678 2.205 1.00 0.00 C ATOM 571 CB THR 78 50.599 24.527 2.924 1.00 0.00 C ATOM 572 OG1 THR 78 50.469 24.362 4.328 1.00 0.00 O ATOM 573 CG2 THR 78 50.373 25.998 2.535 1.00 0.00 C ATOM 574 C THR 78 48.243 24.243 2.499 1.00 0.00 C ATOM 575 O THR 78 47.748 25.086 1.753 1.00 0.00 O ATOM 576 N LEU 79 47.596 23.785 3.584 1.00 0.00 N ATOM 577 CA LEU 79 46.306 24.324 3.898 1.00 0.00 C ATOM 578 CB LEU 79 45.329 23.278 4.470 1.00 0.00 C ATOM 579 CG LEU 79 43.936 23.840 4.810 1.00 0.00 C ATOM 580 CD1 LEU 79 43.189 24.284 3.543 1.00 0.00 C ATOM 581 CD2 LEU 79 43.127 22.851 5.666 1.00 0.00 C ATOM 582 C LEU 79 46.525 25.345 4.960 1.00 0.00 C ATOM 583 O LEU 79 47.033 25.030 6.034 1.00 0.00 O ATOM 584 N GLU 80 46.157 26.609 4.677 1.00 0.00 N ATOM 585 CA GLU 80 46.337 27.632 5.663 1.00 0.00 C ATOM 586 CB GLU 80 47.406 28.669 5.273 1.00 0.00 C ATOM 587 CG GLU 80 47.755 29.654 6.392 1.00 0.00 C ATOM 588 CD GLU 80 46.705 30.755 6.425 1.00 0.00 C ATOM 589 OE1 GLU 80 45.962 30.900 5.418 1.00 0.00 O ATOM 590 OE2 GLU 80 46.635 31.471 7.459 1.00 0.00 O ATOM 591 C GLU 80 45.035 28.346 5.800 1.00 0.00 C ATOM 592 O GLU 80 44.350 28.604 4.811 1.00 0.00 O ATOM 593 N ILE 81 44.653 28.674 7.049 1.00 0.00 N ATOM 594 CA ILE 81 43.411 29.355 7.264 1.00 0.00 C ATOM 595 CB ILE 81 42.477 28.605 8.174 1.00 0.00 C ATOM 596 CG2 ILE 81 43.165 28.417 9.538 1.00 0.00 C ATOM 597 CG1 ILE 81 41.110 29.303 8.240 1.00 0.00 C ATOM 598 CD1 ILE 81 40.030 28.454 8.909 1.00 0.00 C ATOM 599 C ILE 81 43.710 30.671 7.906 1.00 0.00 C ATOM 600 O ILE 81 44.453 30.747 8.882 1.00 0.00 O ATOM 601 N ASN 82 43.148 31.761 7.351 1.00 0.00 N ATOM 602 CA ASN 82 43.403 33.042 7.931 1.00 0.00 C ATOM 603 CB ASN 82 44.543 33.799 7.232 1.00 0.00 C ATOM 604 CG ASN 82 45.074 34.858 8.186 1.00 0.00 C ATOM 605 OD1 ASN 82 44.548 35.065 9.278 1.00 0.00 O ATOM 606 ND2 ASN 82 46.164 35.550 7.760 1.00 0.00 N ATOM 607 C ASN 82 42.155 33.853 7.780 1.00 0.00 C ATOM 608 O ASN 82 41.284 33.524 6.976 1.00 0.00 O ATOM 609 N GLY 83 42.028 34.936 8.572 1.00 0.00 N ATOM 610 CA GLY 83 40.873 35.779 8.467 1.00 0.00 C ATOM 611 C GLY 83 39.694 34.991 8.925 1.00 0.00 C ATOM 612 O GLY 83 39.755 34.291 9.935 1.00 0.00 O ATOM 613 N LYS 84 38.574 35.096 8.188 1.00 0.00 N ATOM 614 CA LYS 84 37.403 34.366 8.560 1.00 0.00 C ATOM 615 CB LYS 84 36.137 34.764 7.782 1.00 0.00 C ATOM 616 CG LYS 84 35.606 36.152 8.142 1.00 0.00 C ATOM 617 CD LYS 84 36.513 37.297 7.691 1.00 0.00 C ATOM 618 CE LYS 84 35.963 38.676 8.058 1.00 0.00 C ATOM 619 NZ LYS 84 34.675 38.906 7.364 1.00 0.00 N ATOM 620 C LYS 84 37.672 32.929 8.284 1.00 0.00 C ATOM 621 O LYS 84 38.475 32.587 7.418 1.00 0.00 O ATOM 622 N SER 85 37.001 32.048 9.042 1.00 0.00 N ATOM 623 CA SER 85 37.175 30.637 8.891 1.00 0.00 C ATOM 624 CB SER 85 36.330 29.837 9.895 1.00 0.00 C ATOM 625 OG SER 85 34.952 30.104 9.684 1.00 0.00 O ATOM 626 C SER 85 36.703 30.293 7.521 1.00 0.00 C ATOM 627 O SER 85 37.075 29.268 6.955 1.00 0.00 O ATOM 628 N LEU 86 35.877 31.176 6.940 1.00 0.00 N ATOM 629 CA LEU 86 35.349 30.925 5.638 1.00 0.00 C ATOM 630 CB LEU 86 34.436 32.067 5.149 1.00 0.00 C ATOM 631 CG LEU 86 33.831 31.867 3.744 1.00 0.00 C ATOM 632 CD1 LEU 86 34.871 32.097 2.632 1.00 0.00 C ATOM 633 CD2 LEU 86 33.137 30.503 3.629 1.00 0.00 C ATOM 634 C LEU 86 36.503 30.790 4.706 1.00 0.00 C ATOM 635 O LEU 86 36.494 29.940 3.816 1.00 0.00 O ATOM 636 N LYS 87 37.550 31.613 4.893 1.00 0.00 N ATOM 637 CA LYS 87 38.644 31.548 3.972 1.00 0.00 C ATOM 638 CB LYS 87 39.454 32.856 3.915 1.00 0.00 C ATOM 639 CG LYS 87 38.644 34.065 3.440 1.00 0.00 C ATOM 640 CD LYS 87 38.128 33.935 2.006 1.00 0.00 C ATOM 641 CE LYS 87 39.163 34.329 0.951 1.00 0.00 C ATOM 642 NZ LYS 87 38.626 34.078 -0.405 1.00 0.00 N ATOM 643 C LYS 87 39.590 30.474 4.403 1.00 0.00 C ATOM 644 O LYS 87 40.308 30.620 5.389 1.00 0.00 O ATOM 645 N LYS 88 39.599 29.346 3.661 1.00 0.00 N ATOM 646 CA LYS 88 40.546 28.301 3.918 1.00 0.00 C ATOM 647 CB LYS 88 39.896 26.932 4.171 1.00 0.00 C ATOM 648 CG LYS 88 40.899 25.844 4.538 1.00 0.00 C ATOM 649 CD LYS 88 40.243 24.529 4.954 1.00 0.00 C ATOM 650 CE LYS 88 39.403 23.917 3.833 1.00 0.00 C ATOM 651 NZ LYS 88 39.037 22.525 4.167 1.00 0.00 N ATOM 652 C LYS 88 41.321 28.188 2.650 1.00 0.00 C ATOM 653 O LYS 88 40.876 27.556 1.694 1.00 0.00 O ATOM 654 N TYR 89 42.521 28.791 2.617 1.00 0.00 N ATOM 655 CA TYR 89 43.282 28.800 1.406 1.00 0.00 C ATOM 656 CB TYR 89 44.256 29.988 1.311 1.00 0.00 C ATOM 657 CG TYR 89 44.970 29.875 0.011 1.00 0.00 C ATOM 658 CD1 TYR 89 44.376 30.318 -1.147 1.00 0.00 C ATOM 659 CD2 TYR 89 46.231 29.326 -0.051 1.00 0.00 C ATOM 660 CE1 TYR 89 45.030 30.217 -2.352 1.00 0.00 C ATOM 661 CE2 TYR 89 46.890 29.223 -1.252 1.00 0.00 C ATOM 662 CZ TYR 89 46.287 29.668 -2.405 1.00 0.00 C ATOM 663 OH TYR 89 46.957 29.563 -3.642 1.00 0.00 O ATOM 664 C TYR 89 44.082 27.546 1.339 1.00 0.00 C ATOM 665 O TYR 89 44.682 27.124 2.325 1.00 0.00 O ATOM 666 N MET 90 44.077 26.896 0.161 1.00 0.00 N ATOM 667 CA MET 90 44.841 25.698 -0.006 1.00 0.00 C ATOM 668 CB MET 90 44.146 24.643 -0.880 1.00 0.00 C ATOM 669 CG MET 90 44.923 23.331 -0.989 1.00 0.00 C ATOM 670 SD MET 90 44.063 22.028 -1.922 1.00 0.00 S ATOM 671 CE MET 90 44.143 22.885 -3.521 1.00 0.00 C ATOM 672 C MET 90 46.123 26.092 -0.724 1.00 0.00 C ATOM 673 O MET 90 46.229 25.793 -1.943 1.00 0.00 O ATOM 674 OXT MET 90 47.012 26.697 -0.067 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 673 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 82.45 43.4 166 93.3 178 ARMSMC SECONDARY STRUCTURE . . 71.64 52.3 111 94.1 118 ARMSMC SURFACE . . . . . . . . 91.19 36.0 100 92.6 108 ARMSMC BURIED . . . . . . . . 67.08 54.5 66 94.3 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.67 44.3 70 93.3 75 ARMSSC1 RELIABLE SIDE CHAINS . 81.67 46.8 62 93.9 66 ARMSSC1 SECONDARY STRUCTURE . . 84.38 46.0 50 96.2 52 ARMSSC1 SURFACE . . . . . . . . 86.01 42.5 40 90.9 44 ARMSSC1 BURIED . . . . . . . . 82.84 46.7 30 96.8 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.43 46.2 52 94.5 55 ARMSSC2 RELIABLE SIDE CHAINS . 82.65 47.7 44 95.7 46 ARMSSC2 SECONDARY STRUCTURE . . 89.23 42.1 38 97.4 39 ARMSSC2 SURFACE . . . . . . . . 86.81 40.0 30 90.9 33 ARMSSC2 BURIED . . . . . . . . 85.91 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.88 30.4 23 95.8 24 ARMSSC3 RELIABLE SIDE CHAINS . 78.88 30.4 23 95.8 24 ARMSSC3 SECONDARY STRUCTURE . . 74.00 29.4 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 71.31 35.3 17 94.4 18 ARMSSC3 BURIED . . . . . . . . 97.16 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.83 30.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 82.83 30.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 81.73 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 85.22 27.3 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 68.25 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 15.54 (Number of atoms: 84) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 15.54 84 93.3 90 CRMSCA CRN = ALL/NP . . . . . 0.1850 CRMSCA SECONDARY STRUCTURE . . 14.80 56 94.9 59 CRMSCA SURFACE . . . . . . . . 17.48 51 92.7 55 CRMSCA BURIED . . . . . . . . 11.92 33 94.3 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 15.53 412 93.2 442 CRMSMC SECONDARY STRUCTURE . . 14.85 278 94.9 293 CRMSMC SURFACE . . . . . . . . 17.45 249 92.6 269 CRMSMC BURIED . . . . . . . . 12.03 163 94.2 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 16.99 337 94.7 356 CRMSSC RELIABLE SIDE CHAINS . 17.22 301 95.3 316 CRMSSC SECONDARY STRUCTURE . . 15.90 244 96.8 252 CRMSSC SURFACE . . . . . . . . 19.30 189 92.6 204 CRMSSC BURIED . . . . . . . . 13.47 148 97.4 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 16.24 673 94.0 716 CRMSALL SECONDARY STRUCTURE . . 15.37 468 95.9 488 CRMSALL SURFACE . . . . . . . . 18.30 393 92.7 424 CRMSALL BURIED . . . . . . . . 12.79 280 95.9 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.226 1.000 0.500 84 93.3 90 ERRCA SECONDARY STRUCTURE . . 13.594 1.000 0.500 56 94.9 59 ERRCA SURFACE . . . . . . . . 16.208 1.000 0.500 51 92.7 55 ERRCA BURIED . . . . . . . . 11.164 1.000 0.500 33 94.3 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.207 1.000 0.500 412 93.2 442 ERRMC SECONDARY STRUCTURE . . 13.604 1.000 0.500 278 94.9 293 ERRMC SURFACE . . . . . . . . 16.157 1.000 0.500 249 92.6 269 ERRMC BURIED . . . . . . . . 11.228 1.000 0.500 163 94.2 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.591 1.000 0.500 337 94.7 356 ERRSC RELIABLE SIDE CHAINS . 15.802 1.000 0.500 301 95.3 316 ERRSC SECONDARY STRUCTURE . . 14.671 1.000 0.500 244 96.8 252 ERRSC SURFACE . . . . . . . . 17.799 1.000 0.500 189 92.6 204 ERRSC BURIED . . . . . . . . 12.772 1.000 0.500 148 97.4 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.863 1.000 0.500 673 94.0 716 ERRALL SECONDARY STRUCTURE . . 14.124 1.000 0.500 468 95.9 488 ERRALL SURFACE . . . . . . . . 16.885 1.000 0.500 393 92.7 424 ERRALL BURIED . . . . . . . . 12.023 1.000 0.500 280 95.9 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 25 84 90 DISTCA CA (P) 0.00 0.00 0.00 1.11 27.78 90 DISTCA CA (RMS) 0.00 0.00 0.00 4.84 8.20 DISTCA ALL (N) 0 1 4 13 181 673 716 DISTALL ALL (P) 0.00 0.14 0.56 1.82 25.28 716 DISTALL ALL (RMS) 0.00 1.94 2.32 3.59 8.10 DISTALL END of the results output