####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS458_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS458_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.29 4.29 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 47 - 86 1.98 5.03 LCS_AVERAGE: 28.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 69 - 85 0.98 5.97 LCS_AVERAGE: 10.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 4 90 0 3 3 7 19 22 26 28 45 50 59 67 72 77 79 81 84 86 88 88 LCS_GDT T 2 T 2 3 4 90 3 3 3 4 10 21 31 47 56 65 71 77 78 80 82 84 86 87 88 89 LCS_GDT D 3 D 3 3 6 90 3 3 4 8 14 38 41 46 55 66 71 77 78 80 82 84 86 87 88 89 LCS_GDT L 4 L 4 3 21 90 3 3 5 7 29 46 53 63 69 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 5 V 5 8 21 90 3 16 29 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 6 A 6 8 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 7 V 7 8 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT W 8 W 8 8 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT D 9 D 9 8 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 10 V 10 8 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 11 A 11 8 21 90 5 21 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT L 12 L 12 8 21 90 4 8 20 35 44 53 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT S 13 S 13 7 21 90 4 8 20 23 32 43 53 58 66 73 79 82 82 83 83 85 86 87 88 89 LCS_GDT D 14 D 14 10 21 90 4 23 32 41 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 15 G 15 10 21 90 5 15 31 43 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 16 V 16 10 21 90 4 22 32 44 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT H 17 H 17 10 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 18 K 18 10 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 19 I 19 10 21 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 20 E 20 10 21 90 14 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT F 21 F 21 10 21 90 6 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 22 E 22 10 21 90 13 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT H 23 H 23 10 21 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 24 G 24 9 21 90 5 16 33 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT T 25 T 25 4 7 90 3 4 4 5 7 10 14 48 58 61 63 74 75 80 83 85 86 87 88 89 LCS_GDT T 26 T 26 4 7 90 3 4 4 5 7 9 14 16 18 24 52 58 75 78 81 85 86 87 88 89 LCS_GDT S 27 S 27 4 10 90 3 4 6 11 29 50 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 28 G 28 7 10 90 4 5 7 32 45 51 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 29 K 29 7 10 90 4 4 7 10 20 44 60 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT R 30 R 30 7 10 90 4 5 17 40 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 31 V 31 7 10 90 4 5 8 19 32 49 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 32 V 32 7 10 90 4 6 26 40 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT Y 33 Y 33 7 10 90 4 9 19 40 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 34 V 34 7 10 90 4 5 17 39 45 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT D 35 D 35 6 10 90 4 5 6 10 37 53 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 36 G 36 4 10 90 3 4 6 9 32 49 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 37 K 37 4 10 90 7 26 34 44 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 38 E 38 3 10 90 3 7 23 41 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 39 E 39 4 8 90 5 15 30 43 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 40 I 40 4 8 90 3 5 23 40 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT R 41 R 41 4 8 90 3 4 7 14 30 48 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 42 K 42 4 8 90 3 4 6 11 16 27 41 50 61 74 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 43 E 43 4 8 90 3 4 5 6 8 14 18 22 28 38 43 58 64 72 82 83 84 86 88 89 LCS_GDT W 44 W 44 4 8 90 3 3 6 10 16 21 30 39 50 63 71 82 82 83 83 85 86 87 88 89 LCS_GDT M 45 M 45 4 8 90 3 3 6 10 16 27 39 47 62 74 78 82 82 83 83 85 86 87 88 89 LCS_GDT F 46 F 46 4 8 90 3 4 6 10 25 36 50 61 71 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 47 K 47 4 40 90 3 9 16 26 36 49 59 67 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT L 48 L 48 4 40 90 3 4 5 8 27 41 51 56 70 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 49 V 49 9 40 90 3 18 23 34 47 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 50 G 50 10 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 51 K 51 10 40 90 8 18 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 52 E 52 10 40 90 6 17 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT T 53 T 53 10 40 90 4 16 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT F 54 F 54 10 40 90 5 16 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT Y 55 Y 55 10 40 90 5 16 28 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT V 56 V 56 10 40 90 7 18 28 41 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 57 G 57 10 40 90 5 16 28 38 49 53 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 58 A 58 10 40 90 3 16 28 38 47 53 61 68 75 76 79 82 82 83 83 85 85 87 88 89 LCS_GDT A 59 A 59 10 40 90 8 18 28 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 60 K 60 8 40 90 3 3 15 27 44 52 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT T 61 T 61 9 40 90 8 18 36 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 62 K 62 9 40 90 8 18 36 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 63 A 63 9 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT T 64 T 64 9 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 65 I 65 9 40 90 12 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT N 66 N 66 10 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 67 I 67 10 40 90 5 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT D 68 D 68 10 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 69 A 69 17 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 70 I 70 17 40 90 5 25 33 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT S 71 S 71 17 40 90 4 6 17 35 45 55 61 67 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 72 G 72 17 40 90 4 8 23 36 48 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT F 73 F 73 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT A 74 A 74 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT Y 75 Y 75 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 76 E 76 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT Y 77 Y 77 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT T 78 T 78 17 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT L 79 L 79 17 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT E 80 E 80 17 40 90 7 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT I 81 I 81 17 40 90 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT N 82 N 82 17 40 90 5 23 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT G 83 G 83 17 40 90 5 23 34 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 84 K 84 17 40 90 5 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT S 85 S 85 17 40 90 5 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT L 86 L 86 11 40 90 3 8 19 38 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 87 K 87 6 39 90 3 6 12 18 27 45 58 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT K 88 K 88 6 26 90 3 7 17 26 36 52 61 68 75 76 79 82 82 83 83 85 86 87 88 89 LCS_GDT Y 89 Y 89 6 13 90 3 5 12 18 23 29 32 41 52 61 72 75 76 83 83 85 86 87 88 89 LCS_GDT M 90 M 90 3 13 90 3 3 4 9 10 23 31 32 36 44 57 60 63 70 79 82 84 85 88 89 LCS_AVERAGE LCS_A: 46.37 ( 10.16 28.94 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 26 37 44 49 55 61 68 75 76 79 82 82 83 83 85 86 87 88 89 GDT PERCENT_AT 16.67 28.89 41.11 48.89 54.44 61.11 67.78 75.56 83.33 84.44 87.78 91.11 91.11 92.22 92.22 94.44 95.56 96.67 97.78 98.89 GDT RMS_LOCAL 0.32 0.63 0.94 1.16 1.41 1.63 1.87 2.28 2.60 2.64 2.86 3.18 3.18 3.30 3.30 3.57 3.78 3.79 3.96 4.14 GDT RMS_ALL_AT 4.65 4.64 4.54 4.55 4.53 4.53 4.54 4.42 4.37 4.37 4.36 4.36 4.36 4.34 4.34 4.34 4.31 4.30 4.30 4.30 # Checking swapping # possible swapping detected: D 9 D 9 # possible swapping detected: E 20 E 20 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 11.261 0 0.543 1.157 13.106 0.476 3.929 LGA T 2 T 2 8.563 0 0.676 1.423 9.709 3.810 3.673 LGA D 3 D 3 8.275 0 0.327 0.976 11.102 11.548 5.833 LGA L 4 L 4 5.146 0 0.616 0.868 10.329 38.690 21.845 LGA V 5 V 5 1.677 0 0.690 0.982 5.867 68.810 51.429 LGA A 6 A 6 1.162 0 0.082 0.077 1.323 85.952 85.048 LGA V 7 V 7 1.220 0 0.046 0.072 1.329 81.429 81.429 LGA W 8 W 8 1.117 0 0.054 0.213 1.513 81.429 82.109 LGA D 9 D 9 1.074 0 0.046 0.637 2.200 83.690 83.869 LGA V 10 V 10 0.898 0 0.087 1.244 3.430 81.548 77.007 LGA A 11 A 11 1.801 0 0.034 0.040 2.437 70.952 71.333 LGA L 12 L 12 3.738 0 0.094 1.465 5.792 37.738 44.524 LGA S 13 S 13 5.698 0 0.356 0.601 7.796 26.429 21.032 LGA D 14 D 14 3.490 0 0.176 1.234 8.162 50.000 33.155 LGA G 15 G 15 3.229 0 0.138 0.138 3.229 51.786 51.786 LGA V 16 V 16 2.811 0 0.169 1.193 4.898 53.571 50.408 LGA H 17 H 17 1.359 0 0.100 1.125 6.206 79.286 56.190 LGA K 18 K 18 1.250 0 0.037 0.693 2.618 81.429 78.730 LGA I 19 I 19 1.215 0 0.033 0.504 2.495 81.429 79.345 LGA E 20 E 20 1.208 0 0.028 0.547 4.459 81.429 63.810 LGA F 21 F 21 1.309 0 0.073 0.372 2.719 83.690 73.203 LGA E 22 E 22 0.206 0 0.031 0.225 2.075 92.857 85.820 LGA H 23 H 23 1.168 0 0.032 0.906 4.159 81.548 65.238 LGA G 24 G 24 1.504 0 0.572 0.572 5.464 54.405 54.405 LGA T 25 T 25 8.698 0 0.198 1.172 11.706 6.190 3.537 LGA T 26 T 26 9.788 0 0.624 0.817 13.459 4.405 2.517 LGA S 27 S 27 4.937 0 0.647 0.752 6.706 24.405 26.746 LGA G 28 G 28 3.839 0 0.675 0.675 4.115 45.119 45.119 LGA K 29 K 29 4.489 0 0.120 0.886 11.558 37.262 20.212 LGA R 30 R 30 2.864 0 0.120 0.216 12.175 47.143 24.069 LGA V 31 V 31 4.115 0 0.072 0.165 8.489 46.905 30.816 LGA V 32 V 32 3.061 0 0.082 0.113 6.685 48.571 34.626 LGA Y 33 Y 33 2.490 0 0.128 1.069 14.973 59.405 24.841 LGA V 34 V 34 3.267 0 0.273 1.116 5.941 63.333 46.735 LGA D 35 D 35 3.487 0 0.126 0.195 3.862 50.000 51.905 LGA G 36 G 36 4.094 0 0.075 0.075 4.094 52.500 52.500 LGA K 37 K 37 2.566 0 0.416 0.811 13.478 59.524 31.005 LGA E 38 E 38 2.245 0 0.142 0.550 9.217 65.119 37.407 LGA E 39 E 39 3.399 0 0.662 1.048 9.727 55.476 29.048 LGA I 40 I 40 2.744 0 0.038 0.983 4.720 65.119 52.798 LGA R 41 R 41 5.623 0 0.072 0.793 12.809 19.762 8.095 LGA K 42 K 42 7.844 0 0.246 0.897 9.479 5.833 20.688 LGA E 43 E 43 12.824 0 0.079 1.205 19.714 0.000 0.000 LGA W 44 W 44 9.821 0 0.477 0.852 13.911 2.262 0.782 LGA M 45 M 45 9.329 0 0.044 0.922 10.013 1.429 1.310 LGA F 46 F 46 7.750 0 0.630 0.606 10.115 5.119 5.541 LGA K 47 K 47 5.955 0 0.170 0.805 8.590 20.357 15.238 LGA L 48 L 48 6.963 0 0.102 1.394 12.133 18.571 10.179 LGA V 49 V 49 3.590 0 0.089 1.088 5.407 49.167 42.517 LGA G 50 G 50 0.774 0 0.300 0.300 1.108 90.595 90.595 LGA K 51 K 51 1.515 0 0.171 1.211 7.008 79.286 57.989 LGA E 52 E 52 1.505 0 0.113 1.067 4.928 79.286 63.862 LGA T 53 T 53 1.789 0 0.073 0.109 2.016 72.857 71.701 LGA F 54 F 54 1.898 0 0.106 0.227 2.039 70.833 74.459 LGA Y 55 Y 55 2.730 0 0.033 1.416 6.518 57.143 54.127 LGA V 56 V 56 2.725 0 0.111 1.141 4.784 55.357 53.537 LGA G 57 G 57 3.382 0 0.178 0.178 3.704 48.452 48.452 LGA A 58 A 58 3.858 0 0.114 0.113 4.086 45.000 43.429 LGA A 59 A 59 2.259 0 0.700 0.646 2.612 67.024 68.190 LGA K 60 K 60 4.399 0 0.350 0.903 12.715 41.905 22.698 LGA T 61 T 61 2.036 0 0.086 0.117 2.899 60.952 66.054 LGA K 62 K 62 1.662 0 0.123 0.693 3.843 70.833 63.598 LGA A 63 A 63 0.597 0 0.038 0.048 0.784 95.238 94.286 LGA T 64 T 64 0.473 0 0.107 1.118 2.459 100.000 88.435 LGA I 65 I 65 0.427 0 0.027 0.096 1.055 95.238 91.726 LGA N 66 N 66 1.158 0 0.050 0.850 2.806 85.952 76.548 LGA I 67 I 67 1.081 0 0.063 0.086 1.569 79.286 81.488 LGA D 68 D 68 0.980 0 0.104 0.536 2.599 90.476 79.762 LGA A 69 A 69 1.391 0 0.079 0.080 1.947 79.405 78.095 LGA I 70 I 70 2.430 0 0.088 1.363 5.592 57.381 48.571 LGA S 71 S 71 4.933 0 0.147 0.708 6.016 34.286 31.905 LGA G 72 G 72 4.627 0 0.697 0.697 5.688 31.905 31.905 LGA F 73 F 73 1.024 0 0.422 0.905 2.155 77.381 79.351 LGA A 74 A 74 1.144 0 0.069 0.097 1.742 83.690 81.524 LGA Y 75 Y 75 0.793 0 0.040 0.126 1.147 90.476 89.722 LGA E 76 E 76 0.711 0 0.050 0.756 2.592 90.476 78.201 LGA Y 77 Y 77 0.519 0 0.061 0.256 1.207 90.476 88.214 LGA T 78 T 78 0.715 0 0.021 1.081 2.890 92.857 83.265 LGA L 79 L 79 0.848 0 0.111 0.243 1.382 90.476 89.345 LGA E 80 E 80 0.905 0 0.048 0.160 1.883 90.476 82.593 LGA I 81 I 81 0.874 0 0.019 1.199 2.989 88.214 77.798 LGA N 82 N 82 1.745 0 0.044 0.309 2.073 72.976 73.988 LGA G 83 G 83 2.058 0 0.197 0.197 2.058 70.833 70.833 LGA K 84 K 84 1.469 0 0.036 1.270 3.575 83.810 72.698 LGA S 85 S 85 0.704 0 0.095 0.637 2.258 81.786 80.238 LGA L 86 L 86 2.616 0 0.044 1.375 8.070 67.143 45.774 LGA K 87 K 87 4.701 0 0.041 1.187 11.325 33.095 17.884 LGA K 88 K 88 4.171 0 0.053 1.206 7.431 25.357 35.503 LGA Y 89 Y 89 8.470 0 0.153 0.345 9.330 5.595 14.484 LGA M 90 M 90 12.033 0 0.232 0.741 13.735 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.293 4.262 5.329 57.119 50.958 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 68 2.28 61.944 57.010 2.858 LGA_LOCAL RMSD: 2.279 Number of atoms: 68 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.419 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.293 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.221834 * X + 0.846497 * Y + 0.483977 * Z + 55.681221 Y_new = 0.972327 * X + 0.154733 * Y + 0.175038 * Z + 11.296243 Z_new = 0.073283 * X + 0.509413 * Y + -0.857396 * Z + 4.268042 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.795105 -0.073348 2.605494 [DEG: 102.8519 -4.2025 149.2838 ] ZXZ: 1.917827 2.600985 0.142877 [DEG: 109.8834 149.0255 8.1862 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS458_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS458_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 68 2.28 57.010 4.29 REMARK ---------------------------------------------------------- MOLECULE T0540TS458_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2kd2_A ATOM 1 N MET 1 28.441 6.988 -0.424 1.00118.92 N ATOM 2 CA MET 1 29.412 6.436 0.549 1.00118.92 C ATOM 3 CB MET 1 30.785 7.107 0.361 1.00118.92 C ATOM 4 CG MET 1 31.922 6.428 1.130 1.00118.92 C ATOM 5 SD MET 1 33.564 7.144 0.813 1.00118.92 S ATOM 6 CE MET 1 34.494 5.720 1.447 1.00118.92 C ATOM 7 C MET 1 28.929 6.698 1.936 1.00118.92 C ATOM 8 O MET 1 28.142 5.927 2.482 1.00118.92 O ATOM 9 N THR 2 29.399 7.805 2.546 1.00272.03 N ATOM 10 CA THR 2 28.964 8.124 3.873 1.00272.03 C ATOM 11 CB THR 2 30.031 7.927 4.912 1.00272.03 C ATOM 12 OG1 THR 2 29.527 8.225 6.206 1.00272.03 O ATOM 13 CG2 THR 2 31.219 8.843 4.582 1.00272.03 C ATOM 14 C THR 2 28.543 9.557 3.926 1.00272.03 C ATOM 15 O THR 2 29.070 10.410 3.213 1.00272.03 O ATOM 16 N ASP 3 27.529 9.833 4.771 1.00118.19 N ATOM 17 CA ASP 3 27.047 11.161 5.017 1.00118.19 C ATOM 18 CB ASP 3 25.801 11.195 5.921 1.00118.19 C ATOM 19 CG ASP 3 25.465 12.653 6.215 1.00118.19 C ATOM 20 OD1 ASP 3 24.957 13.348 5.296 1.00118.19 O ATOM 21 OD2 ASP 3 25.719 13.092 7.370 1.00118.19 O ATOM 22 C ASP 3 28.126 11.893 5.742 1.00118.19 C ATOM 23 O ASP 3 28.348 13.083 5.525 1.00118.19 O ATOM 24 N LEU 4 28.827 11.170 6.630 1.00 91.68 N ATOM 25 CA LEU 4 29.850 11.736 7.456 1.00 91.68 C ATOM 26 CB LEU 4 30.404 10.737 8.488 1.00 91.68 C ATOM 27 CG LEU 4 29.369 10.361 9.570 1.00 91.68 C ATOM 28 CD1 LEU 4 28.132 9.688 8.956 1.00 91.68 C ATOM 29 CD2 LEU 4 29.999 9.516 10.690 1.00 91.68 C ATOM 30 C LEU 4 30.974 12.232 6.604 1.00 91.68 C ATOM 31 O LEU 4 31.582 13.251 6.925 1.00 91.68 O ATOM 32 N VAL 5 31.298 11.535 5.500 1.00 45.74 N ATOM 33 CA VAL 5 32.403 12.006 4.716 1.00 45.74 C ATOM 34 CB VAL 5 33.353 10.905 4.329 1.00 45.74 C ATOM 35 CG1 VAL 5 34.493 11.493 3.482 1.00 45.74 C ATOM 36 CG2 VAL 5 33.847 10.213 5.613 1.00 45.74 C ATOM 37 C VAL 5 31.867 12.653 3.469 1.00 45.74 C ATOM 38 O VAL 5 30.841 12.237 2.932 1.00 45.74 O ATOM 39 N ALA 6 32.544 13.724 2.997 1.00 49.88 N ATOM 40 CA ALA 6 32.127 14.433 1.816 1.00 49.88 C ATOM 41 CB ALA 6 31.780 15.908 2.079 1.00 49.88 C ATOM 42 C ALA 6 33.280 14.404 0.859 1.00 49.88 C ATOM 43 O ALA 6 34.434 14.359 1.282 1.00 49.88 O ATOM 44 N VAL 7 33.001 14.410 -0.462 1.00 54.86 N ATOM 45 CA VAL 7 34.089 14.326 -1.397 1.00 54.86 C ATOM 46 CB VAL 7 34.192 12.975 -2.051 1.00 54.86 C ATOM 47 CG1 VAL 7 35.320 13.013 -3.095 1.00 54.86 C ATOM 48 CG2 VAL 7 34.381 11.902 -0.962 1.00 54.86 C ATOM 49 C VAL 7 33.887 15.329 -2.493 1.00 54.86 C ATOM 50 O VAL 7 32.761 15.674 -2.852 1.00 54.86 O ATOM 51 N TRP 8 35.004 15.852 -3.038 1.00 86.39 N ATOM 52 CA TRP 8 34.897 16.761 -4.139 1.00 86.39 C ATOM 53 CB TRP 8 35.018 18.239 -3.733 1.00 86.39 C ATOM 54 CG TRP 8 33.963 18.660 -2.746 1.00 86.39 C ATOM 55 CD2 TRP 8 34.164 18.587 -1.330 1.00 86.39 C ATOM 56 CD1 TRP 8 32.701 19.145 -2.938 1.00 86.39 C ATOM 57 NE1 TRP 8 32.096 19.361 -1.720 1.00 86.39 N ATOM 58 CE2 TRP 8 32.989 19.024 -0.722 1.00 86.39 C ATOM 59 CE3 TRP 8 35.243 18.184 -0.596 1.00 86.39 C ATOM 60 CZ2 TRP 8 32.877 19.060 0.637 1.00 86.39 C ATOM 61 CZ3 TRP 8 35.129 18.225 0.775 1.00 86.39 C ATOM 62 CH2 TRP 8 33.965 18.654 1.379 1.00 86.39 C ATOM 63 C TRP 8 36.056 16.473 -5.032 1.00 86.39 C ATOM 64 O TRP 8 37.178 16.282 -4.560 1.00 86.39 O ATOM 65 N ASP 9 35.819 16.413 -6.355 1.00 71.29 N ATOM 66 CA ASP 9 36.924 16.189 -7.239 1.00 71.29 C ATOM 67 CB ASP 9 36.876 14.863 -8.033 1.00 71.29 C ATOM 68 CG ASP 9 37.355 13.705 -7.157 1.00 71.29 C ATOM 69 OD1 ASP 9 36.730 13.447 -6.094 1.00 71.29 O ATOM 70 OD2 ASP 9 38.367 13.063 -7.549 1.00 71.29 O ATOM 71 C ASP 9 36.968 17.297 -8.238 1.00 71.29 C ATOM 72 O ASP 9 36.029 17.496 -9.008 1.00 71.29 O ATOM 73 N VAL 10 38.066 18.076 -8.220 1.00101.25 N ATOM 74 CA VAL 10 38.252 19.081 -9.223 1.00101.25 C ATOM 75 CB VAL 10 38.069 20.497 -8.753 1.00101.25 C ATOM 76 CG1 VAL 10 39.220 20.858 -7.800 1.00101.25 C ATOM 77 CG2 VAL 10 37.994 21.415 -9.987 1.00101.25 C ATOM 78 C VAL 10 39.667 18.935 -9.669 1.00101.25 C ATOM 79 O VAL 10 40.510 18.435 -8.926 1.00101.25 O ATOM 80 N ALA 11 39.976 19.342 -10.913 1.00 41.80 N ATOM 81 CA ALA 11 41.338 19.174 -11.306 1.00 41.80 C ATOM 82 CB ALA 11 41.574 19.247 -12.824 1.00 41.80 C ATOM 83 C ALA 11 42.129 20.266 -10.668 1.00 41.80 C ATOM 84 O ALA 11 41.867 21.449 -10.872 1.00 41.80 O ATOM 85 N LEU 12 43.124 19.873 -9.854 1.00 81.67 N ATOM 86 CA LEU 12 43.995 20.820 -9.230 1.00 81.67 C ATOM 87 CB LEU 12 43.931 20.799 -7.693 1.00 81.67 C ATOM 88 CG LEU 12 44.861 21.825 -7.015 1.00 81.67 C ATOM 89 CD1 LEU 12 44.363 23.264 -7.233 1.00 81.67 C ATOM 90 CD2 LEU 12 45.090 21.484 -5.535 1.00 81.67 C ATOM 91 C LEU 12 45.365 20.373 -9.612 1.00 81.67 C ATOM 92 O LEU 12 45.594 19.180 -9.798 1.00 81.67 O ATOM 93 N SER 13 46.304 21.323 -9.769 1.00158.73 N ATOM 94 CA SER 13 47.650 20.975 -10.123 1.00158.73 C ATOM 95 CB SER 13 48.396 20.186 -9.033 1.00158.73 C ATOM 96 OG SER 13 48.640 21.019 -7.909 1.00158.73 O ATOM 97 C SER 13 47.628 20.147 -11.368 1.00158.73 C ATOM 98 O SER 13 48.445 19.242 -11.531 1.00158.73 O ATOM 99 N ASP 14 46.690 20.450 -12.287 1.00 94.04 N ATOM 100 CA ASP 14 46.588 19.745 -13.535 1.00 94.04 C ATOM 101 CB ASP 14 47.739 20.040 -14.515 1.00 94.04 C ATOM 102 CG ASP 14 47.378 19.446 -15.875 1.00 94.04 C ATOM 103 OD1 ASP 14 46.330 18.752 -15.971 1.00 94.04 O ATOM 104 OD2 ASP 14 48.151 19.681 -16.841 1.00 94.04 O ATOM 105 C ASP 14 46.556 18.274 -13.269 1.00 94.04 C ATOM 106 O ASP 14 47.210 17.490 -13.953 1.00 94.04 O ATOM 107 N GLY 15 45.781 17.858 -12.253 1.00 16.23 N ATOM 108 CA GLY 15 45.650 16.468 -11.937 1.00 16.23 C ATOM 109 C GLY 15 44.348 16.353 -11.223 1.00 16.23 C ATOM 110 O GLY 15 43.829 17.349 -10.721 1.00 16.23 O ATOM 111 N VAL 16 43.777 15.138 -11.143 1.00 37.79 N ATOM 112 CA VAL 16 42.511 15.060 -10.483 1.00 37.79 C ATOM 113 CB VAL 16 41.813 13.747 -10.694 1.00 37.79 C ATOM 114 CG1 VAL 16 40.519 13.738 -9.865 1.00 37.79 C ATOM 115 CG2 VAL 16 41.581 13.559 -12.204 1.00 37.79 C ATOM 116 C VAL 16 42.769 15.228 -9.024 1.00 37.79 C ATOM 117 O VAL 16 43.374 14.377 -8.374 1.00 37.79 O ATOM 118 N HIS 17 42.295 16.357 -8.471 1.00 51.18 N ATOM 119 CA HIS 17 42.492 16.632 -7.083 1.00 51.18 C ATOM 120 ND1 HIS 17 44.246 18.612 -4.999 1.00 51.18 N ATOM 121 CG HIS 17 42.935 18.528 -5.410 1.00 51.18 C ATOM 122 CB HIS 17 42.516 18.145 -6.799 1.00 51.18 C ATOM 123 NE2 HIS 17 42.997 19.187 -3.253 1.00 51.18 N ATOM 124 CD2 HIS 17 42.185 18.881 -4.330 1.00 51.18 C ATOM 125 CE1 HIS 17 44.225 19.011 -3.703 1.00 51.18 C ATOM 126 C HIS 17 41.329 16.040 -6.359 1.00 51.18 C ATOM 127 O HIS 17 40.178 16.283 -6.719 1.00 51.18 O ATOM 128 N LYS 18 41.601 15.226 -5.323 1.00 95.75 N ATOM 129 CA LYS 18 40.521 14.666 -4.567 1.00 95.75 C ATOM 130 CB LYS 18 40.657 13.159 -4.268 1.00 95.75 C ATOM 131 CG LYS 18 40.275 12.231 -5.424 1.00 95.75 C ATOM 132 CD LYS 18 40.720 10.782 -5.198 1.00 95.75 C ATOM 133 CE LYS 18 40.071 9.766 -6.142 1.00 95.75 C ATOM 134 NZ LYS 18 40.565 9.953 -7.523 1.00 95.75 N ATOM 135 C LYS 18 40.504 15.362 -3.249 1.00 95.75 C ATOM 136 O LYS 18 41.534 15.501 -2.590 1.00 95.75 O ATOM 137 N ILE 19 39.311 15.830 -2.835 1.00 85.80 N ATOM 138 CA ILE 19 39.209 16.500 -1.573 1.00 85.80 C ATOM 139 CB ILE 19 38.646 17.886 -1.670 1.00 85.80 C ATOM 140 CG2 ILE 19 38.596 18.463 -0.246 1.00 85.80 C ATOM 141 CG1 ILE 19 39.466 18.740 -2.647 1.00 85.80 C ATOM 142 CD1 ILE 19 39.252 18.352 -4.110 1.00 85.80 C ATOM 143 C ILE 19 38.225 15.723 -0.766 1.00 85.80 C ATOM 144 O ILE 19 37.184 15.317 -1.280 1.00 85.80 O ATOM 145 N GLU 20 38.538 15.477 0.520 1.00 53.03 N ATOM 146 CA GLU 20 37.612 14.748 1.335 1.00 53.03 C ATOM 147 CB GLU 20 38.128 13.360 1.749 1.00 53.03 C ATOM 148 CG GLU 20 37.052 12.461 2.360 1.00 53.03 C ATOM 149 CD GLU 20 37.642 11.066 2.507 1.00 53.03 C ATOM 150 OE1 GLU 20 38.864 10.910 2.243 1.00 53.03 O ATOM 151 OE2 GLU 20 36.876 10.138 2.881 1.00 53.03 O ATOM 152 C GLU 20 37.367 15.548 2.574 1.00 53.03 C ATOM 153 O GLU 20 38.266 16.199 3.102 1.00 53.03 O ATOM 154 N PHE 21 36.115 15.531 3.062 1.00 78.00 N ATOM 155 CA PHE 21 35.765 16.281 4.231 1.00 78.00 C ATOM 156 CB PHE 21 34.474 17.078 3.968 1.00 78.00 C ATOM 157 CG PHE 21 34.150 18.051 5.047 1.00 78.00 C ATOM 158 CD1 PHE 21 34.687 19.317 5.017 1.00 78.00 C ATOM 159 CD2 PHE 21 33.297 17.711 6.072 1.00 78.00 C ATOM 160 CE1 PHE 21 34.379 20.234 5.994 1.00 78.00 C ATOM 161 CE2 PHE 21 32.985 18.623 7.052 1.00 78.00 C ATOM 162 CZ PHE 21 33.531 19.885 7.016 1.00 78.00 C ATOM 163 C PHE 21 35.483 15.263 5.289 1.00 78.00 C ATOM 164 O PHE 21 34.479 14.555 5.225 1.00 78.00 O ATOM 165 N GLU 22 36.366 15.156 6.299 1.00 71.80 N ATOM 166 CA GLU 22 36.149 14.177 7.324 1.00 71.80 C ATOM 167 CB GLU 22 37.458 13.594 7.889 1.00 71.80 C ATOM 168 CG GLU 22 38.243 12.801 6.839 1.00 71.80 C ATOM 169 CD GLU 22 39.550 12.310 7.446 1.00 71.80 C ATOM 170 OE1 GLU 22 39.498 11.454 8.368 1.00 71.80 O ATOM 171 OE2 GLU 22 40.623 12.782 6.984 1.00 71.80 O ATOM 172 C GLU 22 35.415 14.849 8.435 1.00 71.80 C ATOM 173 O GLU 22 35.700 15.997 8.774 1.00 71.80 O ATOM 174 N HIS 23 34.422 14.156 9.024 1.00216.63 N ATOM 175 CA HIS 23 33.707 14.770 10.102 1.00216.63 C ATOM 176 ND1 HIS 23 31.000 15.016 12.029 1.00216.63 N ATOM 177 CG HIS 23 31.484 15.686 10.927 1.00216.63 C ATOM 178 CB HIS 23 32.220 15.026 9.795 1.00216.63 C ATOM 179 NE2 HIS 23 30.472 17.159 12.306 1.00216.63 N ATOM 180 CD2 HIS 23 31.153 16.993 11.113 1.00216.63 C ATOM 181 CE1 HIS 23 30.405 15.945 12.821 1.00216.63 C ATOM 182 C HIS 23 33.751 13.846 11.271 1.00216.63 C ATOM 183 O HIS 23 33.283 12.711 11.204 1.00216.63 O ATOM 184 N GLY 24 34.347 14.308 12.381 1.00206.99 N ATOM 185 CA GLY 24 34.343 13.523 13.576 1.00206.99 C ATOM 186 C GLY 24 35.441 12.516 13.511 1.00206.99 C ATOM 187 O GLY 24 35.701 11.817 14.490 1.00206.99 O ATOM 188 N THR 25 36.130 12.408 12.360 1.00141.41 N ATOM 189 CA THR 25 37.192 11.450 12.306 1.00141.41 C ATOM 190 CB THR 25 37.850 11.364 10.955 1.00141.41 C ATOM 191 OG1 THR 25 38.837 10.342 10.961 1.00141.41 O ATOM 192 CG2 THR 25 38.474 12.719 10.575 1.00141.41 C ATOM 193 C THR 25 38.185 11.894 13.322 1.00141.41 C ATOM 194 O THR 25 38.716 11.097 14.093 1.00141.41 O ATOM 195 N THR 26 38.434 13.212 13.346 1.00250.33 N ATOM 196 CA THR 26 39.296 13.821 14.303 1.00250.33 C ATOM 197 CB THR 26 40.561 14.370 13.714 1.00250.33 C ATOM 198 OG1 THR 26 41.427 14.818 14.745 1.00250.33 O ATOM 199 CG2 THR 26 40.201 15.531 12.772 1.00250.33 C ATOM 200 C THR 26 38.501 14.971 14.805 1.00250.33 C ATOM 201 O THR 26 37.443 15.275 14.255 1.00250.33 O ATOM 202 N SER 27 38.959 15.632 15.878 1.00182.50 N ATOM 203 CA SER 27 38.168 16.732 16.327 1.00182.50 C ATOM 204 CB SER 27 38.720 17.405 17.595 1.00182.50 C ATOM 205 OG SER 27 38.726 16.482 18.673 1.00182.50 O ATOM 206 C SER 27 38.180 17.734 15.221 1.00182.50 C ATOM 207 O SER 27 39.239 18.110 14.721 1.00182.50 O ATOM 208 N GLY 28 36.981 18.173 14.795 1.00247.86 N ATOM 209 CA GLY 28 36.880 19.151 13.755 1.00247.86 C ATOM 210 C GLY 28 36.845 18.426 12.453 1.00247.86 C ATOM 211 O GLY 28 37.401 17.338 12.321 1.00247.86 O ATOM 212 N LYS 29 36.196 19.030 11.442 1.00225.49 N ATOM 213 CA LYS 29 36.147 18.392 10.166 1.00225.49 C ATOM 214 CB LYS 29 34.896 18.748 9.355 1.00225.49 C ATOM 215 CG LYS 29 33.590 18.356 10.044 1.00225.49 C ATOM 216 CD LYS 29 33.254 19.225 11.256 1.00225.49 C ATOM 217 CE LYS 29 32.653 20.582 10.880 1.00225.49 C ATOM 218 NZ LYS 29 32.211 21.298 12.098 1.00225.49 N ATOM 219 C LYS 29 37.321 18.906 9.412 1.00225.49 C ATOM 220 O LYS 29 37.365 20.073 9.022 1.00225.49 O ATOM 221 N ARG 30 38.319 18.035 9.199 1.00 81.20 N ATOM 222 CA ARG 30 39.497 18.454 8.508 1.00 81.20 C ATOM 223 CB ARG 30 40.768 17.739 8.987 1.00 81.20 C ATOM 224 CG ARG 30 41.048 18.002 10.468 1.00 81.20 C ATOM 225 CD ARG 30 42.302 17.314 11.004 1.00 81.20 C ATOM 226 NE ARG 30 42.398 17.649 12.452 1.00 81.20 N ATOM 227 CZ ARG 30 43.327 17.028 13.235 1.00 81.20 C ATOM 228 NH1 ARG 30 44.191 16.126 12.684 1.00 81.20 N ATOM 229 NH2 ARG 30 43.392 17.308 14.570 1.00 81.20 N ATOM 230 C ARG 30 39.306 18.164 7.060 1.00 81.20 C ATOM 231 O ARG 30 38.463 17.352 6.680 1.00 81.20 O ATOM 232 N VAL 31 40.081 18.861 6.210 1.00 49.35 N ATOM 233 CA VAL 31 39.985 18.635 4.802 1.00 49.35 C ATOM 234 CB VAL 31 40.139 19.876 3.970 1.00 49.35 C ATOM 235 CG1 VAL 31 40.170 19.469 2.488 1.00 49.35 C ATOM 236 CG2 VAL 31 39.001 20.849 4.312 1.00 49.35 C ATOM 237 C VAL 31 41.099 17.720 4.434 1.00 49.35 C ATOM 238 O VAL 31 42.225 17.859 4.912 1.00 49.35 O ATOM 239 N VAL 32 40.781 16.736 3.574 1.00 42.24 N ATOM 240 CA VAL 32 41.745 15.786 3.124 1.00 42.24 C ATOM 241 CB VAL 32 41.177 14.417 2.887 1.00 42.24 C ATOM 242 CG1 VAL 32 42.281 13.520 2.299 1.00 42.24 C ATOM 243 CG2 VAL 32 40.597 13.900 4.213 1.00 42.24 C ATOM 244 C VAL 32 42.257 16.305 1.829 1.00 42.24 C ATOM 245 O VAL 32 41.509 16.827 1.003 1.00 42.24 O ATOM 246 N TYR 33 43.574 16.159 1.635 1.00127.70 N ATOM 247 CA TYR 33 44.238 16.707 0.500 1.00127.70 C ATOM 248 CB TYR 33 45.320 17.703 0.954 1.00127.70 C ATOM 249 CG TYR 33 45.790 18.551 -0.174 1.00127.70 C ATOM 250 CD1 TYR 33 46.766 18.123 -1.042 1.00127.70 C ATOM 251 CD2 TYR 33 45.249 19.804 -0.340 1.00127.70 C ATOM 252 CE1 TYR 33 47.186 18.936 -2.069 1.00127.70 C ATOM 253 CE2 TYR 33 45.664 20.621 -1.363 1.00127.70 C ATOM 254 CZ TYR 33 46.634 20.186 -2.230 1.00127.70 C ATOM 255 OH TYR 33 47.061 21.025 -3.280 1.00127.70 O ATOM 256 C TYR 33 44.910 15.538 -0.130 1.00127.70 C ATOM 257 O TYR 33 45.070 14.495 0.500 1.00127.70 O ATOM 258 N VAL 34 45.314 15.678 -1.400 1.00128.32 N ATOM 259 CA VAL 34 45.899 14.572 -2.090 1.00128.32 C ATOM 260 CB VAL 34 45.438 14.465 -3.511 1.00128.32 C ATOM 261 CG1 VAL 34 43.918 14.224 -3.507 1.00128.32 C ATOM 262 CG2 VAL 34 45.865 15.738 -4.263 1.00128.32 C ATOM 263 C VAL 34 47.369 14.788 -2.099 1.00128.32 C ATOM 264 O VAL 34 47.896 15.572 -1.310 1.00128.32 O ATOM 265 N ASP 35 48.076 14.076 -2.996 1.00187.41 N ATOM 266 CA ASP 35 49.498 14.209 -3.033 1.00187.41 C ATOM 267 CB ASP 35 49.951 15.632 -3.401 1.00187.41 C ATOM 268 CG ASP 35 49.528 15.903 -4.838 1.00187.41 C ATOM 269 OD1 ASP 35 49.102 14.934 -5.523 1.00187.41 O ATOM 270 OD2 ASP 35 49.624 17.082 -5.271 1.00187.41 O ATOM 271 C ASP 35 50.025 13.887 -1.674 1.00187.41 C ATOM 272 O ASP 35 50.684 14.708 -1.038 1.00187.41 O ATOM 273 N GLY 36 49.739 12.658 -1.199 1.00 45.39 N ATOM 274 CA GLY 36 50.218 12.247 0.085 1.00 45.39 C ATOM 275 C GLY 36 49.070 12.148 1.033 1.00 45.39 C ATOM 276 O GLY 36 49.262 11.729 2.174 1.00 45.39 O ATOM 277 N LYS 37 47.858 12.543 0.587 1.00 95.20 N ATOM 278 CA LYS 37 46.673 12.463 1.397 1.00 95.20 C ATOM 279 CB LYS 37 46.161 11.027 1.654 1.00 95.20 C ATOM 280 CG LYS 37 47.043 10.182 2.577 1.00 95.20 C ATOM 281 CD LYS 37 46.367 8.915 3.106 1.00 95.20 C ATOM 282 CE LYS 37 47.269 8.089 4.027 1.00 95.20 C ATOM 283 NZ LYS 37 46.533 6.912 4.540 1.00 95.20 N ATOM 284 C LYS 37 46.966 13.114 2.705 1.00 95.20 C ATOM 285 O LYS 37 46.589 12.615 3.764 1.00 95.20 O ATOM 286 N GLU 38 47.659 14.264 2.652 1.00 67.66 N ATOM 287 CA GLU 38 48.026 14.933 3.861 1.00 67.66 C ATOM 288 CB GLU 38 49.236 15.866 3.703 1.00 67.66 C ATOM 289 CG GLU 38 49.011 16.991 2.694 1.00 67.66 C ATOM 290 CD GLU 38 50.283 17.822 2.649 1.00 67.66 C ATOM 291 OE1 GLU 38 51.237 17.479 3.397 1.00 67.66 O ATOM 292 OE2 GLU 38 50.320 18.806 1.863 1.00 67.66 O ATOM 293 C GLU 38 46.871 15.746 4.329 1.00 67.66 C ATOM 294 O GLU 38 46.027 16.178 3.546 1.00 67.66 O ATOM 295 N GLU 39 46.809 15.952 5.656 1.00 73.53 N ATOM 296 CA GLU 39 45.769 16.733 6.240 1.00 73.53 C ATOM 297 CB GLU 39 45.746 16.641 7.776 1.00 73.53 C ATOM 298 CG GLU 39 47.051 17.108 8.429 1.00 73.53 C ATOM 299 CD GLU 39 46.950 16.856 9.926 1.00 73.53 C ATOM 300 OE1 GLU 39 46.021 16.112 10.340 1.00 73.53 O ATOM 301 OE2 GLU 39 47.806 17.398 10.675 1.00 73.53 O ATOM 302 C GLU 39 46.033 18.151 5.864 1.00 73.53 C ATOM 303 O GLU 39 47.180 18.553 5.677 1.00 73.53 O ATOM 304 N ILE 40 44.961 18.948 5.722 1.00 93.15 N ATOM 305 CA ILE 40 45.148 20.317 5.356 1.00 93.15 C ATOM 306 CB ILE 40 44.251 20.786 4.252 1.00 93.15 C ATOM 307 CG2 ILE 40 42.814 20.800 4.793 1.00 93.15 C ATOM 308 CG1 ILE 40 44.722 22.151 3.726 1.00 93.15 C ATOM 309 CD1 ILE 40 44.020 22.578 2.440 1.00 93.15 C ATOM 310 C ILE 40 44.798 21.129 6.555 1.00 93.15 C ATOM 311 O ILE 40 43.901 20.768 7.315 1.00 93.15 O ATOM 312 N ARG 41 45.543 22.227 6.790 1.00115.57 N ATOM 313 CA ARG 41 45.229 23.050 7.918 1.00115.57 C ATOM 314 CB ARG 41 46.400 23.913 8.424 1.00115.57 C ATOM 315 CG ARG 41 46.928 24.920 7.401 1.00115.57 C ATOM 316 CD ARG 41 48.095 25.760 7.925 1.00115.57 C ATOM 317 NE ARG 41 49.307 24.893 7.922 1.00115.57 N ATOM 318 CZ ARG 41 49.587 24.103 9.000 1.00115.57 C ATOM 319 NH1 ARG 41 48.753 24.100 10.081 1.00115.57 N ATOM 320 NH2 ARG 41 50.699 23.311 8.997 1.00115.57 N ATOM 321 C ARG 41 44.131 23.972 7.504 1.00115.57 C ATOM 322 O ARG 41 44.102 24.457 6.375 1.00115.57 O ATOM 323 N LYS 42 43.185 24.225 8.427 1.00 90.13 N ATOM 324 CA LYS 42 42.078 25.076 8.113 1.00 90.13 C ATOM 325 CB LYS 42 40.733 24.344 8.101 1.00 90.13 C ATOM 326 CG LYS 42 40.297 23.830 9.473 1.00 90.13 C ATOM 327 CD LYS 42 38.829 23.401 9.513 1.00 90.13 C ATOM 328 CE LYS 42 38.367 22.889 10.878 1.00 90.13 C ATOM 329 NZ LYS 42 36.935 22.521 10.820 1.00 90.13 N ATOM 330 C LYS 42 41.985 26.132 9.167 1.00 90.13 C ATOM 331 O LYS 42 42.794 26.185 10.093 1.00 90.13 O ATOM 332 N GLU 43 40.993 27.032 9.009 1.00 71.66 N ATOM 333 CA GLU 43 40.739 28.108 9.925 1.00 71.66 C ATOM 334 CB GLU 43 39.609 29.037 9.452 1.00 71.66 C ATOM 335 CG GLU 43 39.325 30.192 10.415 1.00 71.66 C ATOM 336 CD GLU 43 38.166 31.005 9.855 1.00 71.66 C ATOM 337 OE1 GLU 43 37.447 30.475 8.967 1.00 71.66 O ATOM 338 OE2 GLU 43 37.980 32.165 10.312 1.00 71.66 O ATOM 339 C GLU 43 40.301 27.526 11.228 1.00 71.66 C ATOM 340 O GLU 43 40.697 27.996 12.294 1.00 71.66 O ATOM 341 N TRP 44 39.477 26.462 11.167 1.00 59.38 N ATOM 342 CA TRP 44 38.973 25.849 12.357 1.00 59.38 C ATOM 343 CB TRP 44 40.088 25.418 13.328 1.00 59.38 C ATOM 344 CG TRP 44 40.979 24.315 12.808 1.00 59.38 C ATOM 345 CD2 TRP 44 40.710 22.917 12.966 1.00 59.38 C ATOM 346 CD1 TRP 44 42.161 24.406 12.127 1.00 59.38 C ATOM 347 NE1 TRP 44 42.642 23.148 11.855 1.00 59.38 N ATOM 348 CE2 TRP 44 41.757 22.218 12.365 1.00 59.38 C ATOM 349 CE3 TRP 44 39.668 22.262 13.564 1.00 59.38 C ATOM 350 CZ2 TRP 44 41.781 20.856 12.352 1.00 59.38 C ATOM 351 CZ3 TRP 44 39.697 20.886 13.550 1.00 59.38 C ATOM 352 CH2 TRP 44 40.734 20.196 12.957 1.00 59.38 C ATOM 353 C TRP 44 38.117 26.846 13.068 1.00 59.38 C ATOM 354 O TRP 44 38.017 26.832 14.294 1.00 59.38 O ATOM 355 N MET 45 37.467 27.743 12.304 1.00131.08 N ATOM 356 CA MET 45 36.607 28.720 12.904 1.00131.08 C ATOM 357 CB MET 45 36.198 29.842 11.933 1.00131.08 C ATOM 358 CG MET 45 35.340 30.937 12.567 1.00131.08 C ATOM 359 SD MET 45 36.228 32.005 13.739 1.00131.08 S ATOM 360 CE MET 45 34.790 33.046 14.122 1.00131.08 C ATOM 361 C MET 45 35.363 28.010 13.329 1.00131.08 C ATOM 362 O MET 45 34.904 27.087 12.658 1.00131.08 O ATOM 363 N PHE 46 34.792 28.419 14.481 1.00116.71 N ATOM 364 CA PHE 46 33.602 27.773 14.950 1.00116.71 C ATOM 365 CB PHE 46 33.769 27.068 16.305 1.00116.71 C ATOM 366 CG PHE 46 34.665 25.899 16.091 1.00116.71 C ATOM 367 CD1 PHE 46 34.162 24.725 15.580 1.00116.71 C ATOM 368 CD2 PHE 46 36.003 25.973 16.404 1.00116.71 C ATOM 369 CE1 PHE 46 34.982 23.640 15.379 1.00116.71 C ATOM 370 CE2 PHE 46 36.827 24.890 16.205 1.00116.71 C ATOM 371 CZ PHE 46 36.317 23.721 15.692 1.00116.71 C ATOM 372 C PHE 46 32.530 28.798 15.114 1.00116.71 C ATOM 373 O PHE 46 32.781 29.930 15.525 1.00116.71 O ATOM 374 N LYS 47 31.293 28.401 14.764 1.00256.95 N ATOM 375 CA LYS 47 30.142 29.246 14.854 1.00256.95 C ATOM 376 CB LYS 47 30.186 30.419 13.860 1.00256.95 C ATOM 377 CG LYS 47 29.101 31.475 14.067 1.00256.95 C ATOM 378 CD LYS 47 29.380 32.762 13.286 1.00256.95 C ATOM 379 CE LYS 47 28.308 33.839 13.453 1.00256.95 C ATOM 380 NZ LYS 47 28.702 35.059 12.712 1.00256.95 N ATOM 381 C LYS 47 29.001 28.358 14.477 1.00256.95 C ATOM 382 O LYS 47 29.178 27.149 14.342 1.00256.95 O ATOM 383 N LEU 48 27.786 28.916 14.330 1.00203.39 N ATOM 384 CA LEU 48 26.723 28.058 13.905 1.00203.39 C ATOM 385 CB LEU 48 25.381 28.791 13.749 1.00203.39 C ATOM 386 CG LEU 48 24.237 27.868 13.295 1.00203.39 C ATOM 387 CD1 LEU 48 23.967 26.774 14.339 1.00203.39 C ATOM 388 CD2 LEU 48 22.977 28.673 12.940 1.00203.39 C ATOM 389 C LEU 48 27.135 27.578 12.555 1.00203.39 C ATOM 390 O LEU 48 27.085 26.386 12.257 1.00203.39 O ATOM 391 N VAL 49 27.581 28.525 11.711 1.00 67.58 N ATOM 392 CA VAL 49 28.098 28.206 10.417 1.00 67.58 C ATOM 393 CB VAL 49 27.967 29.334 9.435 1.00 67.58 C ATOM 394 CG1 VAL 49 28.651 28.930 8.118 1.00 67.58 C ATOM 395 CG2 VAL 49 26.477 29.682 9.288 1.00 67.58 C ATOM 396 C VAL 49 29.556 27.981 10.637 1.00 67.58 C ATOM 397 O VAL 49 30.151 28.593 11.521 1.00 67.58 O ATOM 398 N GLY 50 30.174 27.075 9.858 1.00114.22 N ATOM 399 CA GLY 50 31.571 26.853 10.072 1.00114.22 C ATOM 400 C GLY 50 32.272 27.188 8.804 1.00114.22 C ATOM 401 O GLY 50 31.911 26.709 7.730 1.00114.22 O ATOM 402 N LYS 51 33.316 28.030 8.902 1.00103.28 N ATOM 403 CA LYS 51 34.034 28.369 7.715 1.00103.28 C ATOM 404 CB LYS 51 34.211 29.883 7.510 1.00103.28 C ATOM 405 CG LYS 51 32.898 30.608 7.205 1.00103.28 C ATOM 406 CD LYS 51 32.192 30.079 5.954 1.00103.28 C ATOM 407 CE LYS 51 30.878 30.794 5.638 1.00103.28 C ATOM 408 NZ LYS 51 30.266 30.211 4.424 1.00103.28 N ATOM 409 C LYS 51 35.384 27.758 7.841 1.00103.28 C ATOM 410 O LYS 51 36.158 28.097 8.735 1.00103.28 O ATOM 411 N GLU 52 35.696 26.824 6.928 1.00 88.39 N ATOM 412 CA GLU 52 36.965 26.172 6.963 1.00 88.39 C ATOM 413 CB GLU 52 36.872 24.682 6.594 1.00 88.39 C ATOM 414 CG GLU 52 38.219 23.968 6.627 1.00 88.39 C ATOM 415 CD GLU 52 37.977 22.469 6.699 1.00 88.39 C ATOM 416 OE1 GLU 52 36.800 22.048 6.552 1.00 88.39 O ATOM 417 OE2 GLU 52 38.972 21.726 6.911 1.00 88.39 O ATOM 418 C GLU 52 37.828 26.854 5.960 1.00 88.39 C ATOM 419 O GLU 52 37.569 26.796 4.759 1.00 88.39 O ATOM 420 N THR 53 38.890 27.531 6.434 1.00 36.64 N ATOM 421 CA THR 53 39.731 28.221 5.507 1.00 36.64 C ATOM 422 CB THR 53 40.025 29.637 5.901 1.00 36.64 C ATOM 423 OG1 THR 53 38.815 30.363 6.049 1.00 36.64 O ATOM 424 CG2 THR 53 40.885 30.279 4.801 1.00 36.64 C ATOM 425 C THR 53 41.029 27.491 5.450 1.00 36.64 C ATOM 426 O THR 53 41.726 27.349 6.453 1.00 36.64 O ATOM 427 N PHE 54 41.377 26.996 4.251 1.00 64.54 N ATOM 428 CA PHE 54 42.607 26.288 4.075 1.00 64.54 C ATOM 429 CB PHE 54 42.409 24.766 3.935 1.00 64.54 C ATOM 430 CG PHE 54 41.384 24.512 2.881 1.00 64.54 C ATOM 431 CD1 PHE 54 41.730 24.412 1.553 1.00 64.54 C ATOM 432 CD2 PHE 54 40.061 24.371 3.234 1.00 64.54 C ATOM 433 CE1 PHE 54 40.768 24.176 0.597 1.00 64.54 C ATOM 434 CE2 PHE 54 39.095 24.134 2.285 1.00 64.54 C ATOM 435 CZ PHE 54 39.449 24.036 0.960 1.00 64.54 C ATOM 436 C PHE 54 43.290 26.837 2.863 1.00 64.54 C ATOM 437 O PHE 54 42.647 27.303 1.927 1.00 64.54 O ATOM 438 N TYR 55 44.638 26.809 2.870 1.00144.97 N ATOM 439 CA TYR 55 45.417 27.351 1.794 1.00144.97 C ATOM 440 CB TYR 55 46.653 28.104 2.328 1.00144.97 C ATOM 441 CG TYR 55 47.470 28.711 1.235 1.00144.97 C ATOM 442 CD1 TYR 55 48.373 27.962 0.515 1.00144.97 C ATOM 443 CD2 TYR 55 47.346 30.052 0.951 1.00144.97 C ATOM 444 CE1 TYR 55 49.130 28.541 -0.478 1.00144.97 C ATOM 445 CE2 TYR 55 48.099 30.637 -0.041 1.00144.97 C ATOM 446 CZ TYR 55 48.993 29.880 -0.758 1.00144.97 C ATOM 447 OH TYR 55 49.768 30.478 -1.775 1.00144.97 O ATOM 448 C TYR 55 45.883 26.184 0.983 1.00144.97 C ATOM 449 O TYR 55 46.411 25.218 1.529 1.00144.97 O ATOM 450 N VAL 56 45.666 26.225 -0.347 1.00103.98 N ATOM 451 CA VAL 56 46.098 25.117 -1.148 1.00103.98 C ATOM 452 CB VAL 56 44.988 24.200 -1.571 1.00103.98 C ATOM 453 CG1 VAL 56 44.407 23.505 -0.332 1.00103.98 C ATOM 454 CG2 VAL 56 43.955 25.027 -2.355 1.00103.98 C ATOM 455 C VAL 56 46.705 25.627 -2.410 1.00103.98 C ATOM 456 O VAL 56 46.308 26.661 -2.946 1.00103.98 O ATOM 457 N GLY 57 47.719 24.896 -2.905 1.00 28.92 N ATOM 458 CA GLY 57 48.318 25.218 -4.162 1.00 28.92 C ATOM 459 C GLY 57 49.454 26.145 -3.930 1.00 28.92 C ATOM 460 O GLY 57 49.364 27.073 -3.126 1.00 28.92 O ATOM 461 N ALA 58 50.567 25.906 -4.644 1.00 66.71 N ATOM 462 CA ALA 58 51.675 26.797 -4.527 1.00 66.71 C ATOM 463 CB ALA 58 52.881 26.362 -5.374 1.00 66.71 C ATOM 464 C ALA 58 51.195 28.100 -5.060 1.00 66.71 C ATOM 465 O ALA 58 51.375 29.149 -4.444 1.00 66.71 O ATOM 466 N ALA 59 50.515 28.052 -6.218 1.00208.97 N ATOM 467 CA ALA 59 49.996 29.271 -6.748 1.00208.97 C ATOM 468 CB ALA 59 49.264 29.102 -8.091 1.00208.97 C ATOM 469 C ALA 59 49.006 29.707 -5.734 1.00208.97 C ATOM 470 O ALA 59 48.364 28.875 -5.094 1.00208.97 O ATOM 471 N LYS 60 48.863 31.027 -5.528 1.00216.54 N ATOM 472 CA LYS 60 47.944 31.391 -4.501 1.00216.54 C ATOM 473 CB LYS 60 47.866 32.895 -4.197 1.00216.54 C ATOM 474 CG LYS 60 46.855 33.201 -3.090 1.00216.54 C ATOM 475 CD LYS 60 46.970 34.605 -2.498 1.00216.54 C ATOM 476 CE LYS 60 47.964 34.692 -1.339 1.00216.54 C ATOM 477 NZ LYS 60 47.966 36.060 -0.778 1.00216.54 N ATOM 478 C LYS 60 46.585 30.956 -4.911 1.00216.54 C ATOM 479 O LYS 60 46.052 31.388 -5.931 1.00216.54 O ATOM 480 N THR 61 46.004 30.046 -4.113 1.00 67.16 N ATOM 481 CA THR 61 44.655 29.641 -4.336 1.00 67.16 C ATOM 482 CB THR 61 44.500 28.222 -4.796 1.00 67.16 C ATOM 483 OG1 THR 61 45.196 28.018 -6.017 1.00 67.16 O ATOM 484 CG2 THR 61 42.999 27.935 -4.982 1.00 67.16 C ATOM 485 C THR 61 44.005 29.729 -3.001 1.00 67.16 C ATOM 486 O THR 61 44.581 29.314 -1.998 1.00 67.16 O ATOM 487 N LYS 62 42.795 30.308 -2.941 1.00 51.61 N ATOM 488 CA LYS 62 42.143 30.344 -1.671 1.00 51.61 C ATOM 489 CB LYS 62 41.605 31.732 -1.285 1.00 51.61 C ATOM 490 CG LYS 62 42.712 32.751 -1.010 1.00 51.61 C ATOM 491 CD LYS 62 42.219 34.196 -0.919 1.00 51.61 C ATOM 492 CE LYS 62 43.336 35.201 -0.629 1.00 51.61 C ATOM 493 NZ LYS 62 42.781 36.571 -0.559 1.00 51.61 N ATOM 494 C LYS 62 40.975 29.433 -1.787 1.00 51.61 C ATOM 495 O LYS 62 39.964 29.779 -2.393 1.00 51.61 O ATOM 496 N ALA 63 41.089 28.225 -1.208 1.00 62.75 N ATOM 497 CA ALA 63 39.986 27.320 -1.290 1.00 62.75 C ATOM 498 CB ALA 63 40.353 25.952 -1.887 1.00 62.75 C ATOM 499 C ALA 63 39.518 27.081 0.102 1.00 62.75 C ATOM 500 O ALA 63 40.321 26.879 1.009 1.00 62.75 O ATOM 501 N THR 64 38.191 27.122 0.317 1.00 37.23 N ATOM 502 CA THR 64 37.681 26.877 1.630 1.00 37.23 C ATOM 503 CB THR 64 37.320 28.130 2.373 1.00 37.23 C ATOM 504 OG1 THR 64 36.298 28.837 1.687 1.00 37.23 O ATOM 505 CG2 THR 64 38.582 29.002 2.496 1.00 37.23 C ATOM 506 C THR 64 36.440 26.062 1.484 1.00 37.23 C ATOM 507 O THR 64 35.830 26.029 0.417 1.00 37.23 O ATOM 508 N ILE 65 36.040 25.368 2.568 1.00 53.32 N ATOM 509 CA ILE 65 34.849 24.576 2.508 1.00 53.32 C ATOM 510 CB ILE 65 34.982 23.222 3.150 1.00 53.32 C ATOM 511 CG2 ILE 65 33.577 22.605 3.258 1.00 53.32 C ATOM 512 CG1 ILE 65 35.992 22.342 2.395 1.00 53.32 C ATOM 513 CD1 ILE 65 36.310 21.033 3.117 1.00 53.32 C ATOM 514 C ILE 65 33.806 25.301 3.287 1.00 53.32 C ATOM 515 O ILE 65 33.942 25.504 4.493 1.00 53.32 O ATOM 516 N ASN 66 32.724 25.720 2.607 1.00 49.03 N ATOM 517 CA ASN 66 31.696 26.406 3.321 1.00 49.03 C ATOM 518 CB ASN 66 30.777 27.271 2.438 1.00 49.03 C ATOM 519 CG ASN 66 31.536 28.529 2.047 1.00 49.03 C ATOM 520 OD1 ASN 66 32.734 28.647 2.296 1.00 49.03 O ATOM 521 ND2 ASN 66 30.813 29.504 1.434 1.00 49.03 N ATOM 522 C ASN 66 30.846 25.370 3.968 1.00 49.03 C ATOM 523 O ASN 66 30.415 24.413 3.329 1.00 49.03 O ATOM 524 N ILE 67 30.595 25.530 5.279 1.00 49.53 N ATOM 525 CA ILE 67 29.745 24.598 5.953 1.00 49.53 C ATOM 526 CB ILE 67 30.293 24.086 7.258 1.00 49.53 C ATOM 527 CG2 ILE 67 29.185 23.269 7.943 1.00 49.53 C ATOM 528 CG1 ILE 67 31.599 23.304 7.047 1.00 49.53 C ATOM 529 CD1 ILE 67 32.341 23.006 8.350 1.00 49.53 C ATOM 530 C ILE 67 28.512 25.363 6.294 1.00 49.53 C ATOM 531 O ILE 67 28.591 26.481 6.801 1.00 49.53 O ATOM 532 N ASP 68 27.330 24.799 5.981 1.00 39.77 N ATOM 533 CA ASP 68 26.121 25.495 6.301 1.00 39.77 C ATOM 534 CB ASP 68 25.184 25.706 5.098 1.00 39.77 C ATOM 535 CG ASP 68 25.833 26.693 4.136 1.00 39.77 C ATOM 536 OD1 ASP 68 26.989 27.114 4.407 1.00 39.77 O ATOM 537 OD2 ASP 68 25.178 27.042 3.118 1.00 39.77 O ATOM 538 C ASP 68 25.370 24.662 7.285 1.00 39.77 C ATOM 539 O ASP 68 24.994 23.527 6.994 1.00 39.77 O ATOM 540 N ALA 69 25.153 25.203 8.496 1.00 37.96 N ATOM 541 CA ALA 69 24.393 24.484 9.472 1.00 37.96 C ATOM 542 CB ALA 69 24.538 25.034 10.900 1.00 37.96 C ATOM 543 C ALA 69 22.964 24.619 9.071 1.00 37.96 C ATOM 544 O ALA 69 22.571 25.610 8.460 1.00 37.96 O ATOM 545 N ILE 70 22.142 23.608 9.405 1.00123.87 N ATOM 546 CA ILE 70 20.766 23.673 9.028 1.00123.87 C ATOM 547 CB ILE 70 20.353 22.579 8.089 1.00123.87 C ATOM 548 CG2 ILE 70 20.365 21.260 8.875 1.00123.87 C ATOM 549 CG1 ILE 70 18.997 22.903 7.446 1.00123.87 C ATOM 550 CD1 ILE 70 19.061 24.077 6.471 1.00123.87 C ATOM 551 C ILE 70 19.963 23.507 10.271 1.00123.87 C ATOM 552 O ILE 70 20.405 22.866 11.225 1.00123.87 O ATOM 553 N SER 71 18.755 24.098 10.296 1.00101.64 N ATOM 554 CA SER 71 17.943 23.955 11.462 1.00101.64 C ATOM 555 CB SER 71 16.579 24.661 11.365 1.00101.64 C ATOM 556 OG SER 71 15.803 24.092 10.320 1.00101.64 O ATOM 557 C SER 71 17.706 22.495 11.600 1.00101.64 C ATOM 558 O SER 71 17.875 21.741 10.643 1.00101.64 O ATOM 559 N GLY 72 17.330 22.046 12.809 1.00 98.70 N ATOM 560 CA GLY 72 17.183 20.637 12.980 1.00 98.70 C ATOM 561 C GLY 72 18.578 20.126 13.081 1.00 98.70 C ATOM 562 O GLY 72 19.492 20.877 13.419 1.00 98.70 O ATOM 563 N PHE 73 18.791 18.831 12.797 1.00213.98 N ATOM 564 CA PHE 73 20.132 18.350 12.905 1.00213.98 C ATOM 565 CB PHE 73 20.233 17.119 13.819 1.00213.98 C ATOM 566 CG PHE 73 19.789 17.569 15.171 1.00213.98 C ATOM 567 CD1 PHE 73 18.448 17.655 15.472 1.00213.98 C ATOM 568 CD2 PHE 73 20.708 17.905 16.138 1.00213.98 C ATOM 569 CE1 PHE 73 18.029 18.072 16.713 1.00213.98 C ATOM 570 CE2 PHE 73 20.296 18.323 17.382 1.00213.98 C ATOM 571 CZ PHE 73 18.954 18.406 17.672 1.00213.98 C ATOM 572 C PHE 73 20.589 17.959 11.537 1.00213.98 C ATOM 573 O PHE 73 20.084 16.998 10.959 1.00213.98 O ATOM 574 N ALA 74 21.554 18.713 10.974 1.00 56.57 N ATOM 575 CA ALA 74 22.076 18.363 9.685 1.00 56.57 C ATOM 576 CB ALA 74 21.025 18.400 8.563 1.00 56.57 C ATOM 577 C ALA 74 23.124 19.366 9.340 1.00 56.57 C ATOM 578 O ALA 74 23.086 20.501 9.810 1.00 56.57 O ATOM 579 N TYR 75 24.107 18.964 8.511 1.00101.47 N ATOM 580 CA TYR 75 25.125 19.898 8.130 1.00101.47 C ATOM 581 CB TYR 75 26.451 19.709 8.884 1.00101.47 C ATOM 582 CG TYR 75 26.209 19.954 10.335 1.00101.47 C ATOM 583 CD1 TYR 75 25.801 18.932 11.162 1.00101.47 C ATOM 584 CD2 TYR 75 26.390 21.208 10.871 1.00101.47 C ATOM 585 CE1 TYR 75 25.577 19.156 12.502 1.00101.47 C ATOM 586 CE2 TYR 75 26.167 21.438 12.208 1.00101.47 C ATOM 587 CZ TYR 75 25.761 20.413 13.028 1.00101.47 C ATOM 588 OH TYR 75 25.535 20.657 14.400 1.00101.47 O ATOM 589 C TYR 75 25.423 19.675 6.684 1.00101.47 C ATOM 590 O TYR 75 25.291 18.562 6.178 1.00101.47 O ATOM 591 N GLU 76 25.826 20.745 5.972 1.00 79.28 N ATOM 592 CA GLU 76 26.193 20.579 4.597 1.00 79.28 C ATOM 593 CB GLU 76 25.256 21.278 3.600 1.00 79.28 C ATOM 594 CG GLU 76 25.595 20.945 2.146 1.00 79.28 C ATOM 595 CD GLU 76 24.455 21.439 1.273 1.00 79.28 C ATOM 596 OE1 GLU 76 23.630 22.250 1.773 1.00 79.28 O ATOM 597 OE2 GLU 76 24.394 21.008 0.091 1.00 79.28 O ATOM 598 C GLU 76 27.549 21.178 4.428 1.00 79.28 C ATOM 599 O GLU 76 27.922 22.110 5.139 1.00 79.28 O ATOM 600 N TYR 77 28.348 20.627 3.496 1.00118.58 N ATOM 601 CA TYR 77 29.649 21.188 3.305 1.00118.58 C ATOM 602 CB TYR 77 30.764 20.225 3.731 1.00118.58 C ATOM 603 CG TYR 77 30.328 19.712 5.058 1.00118.58 C ATOM 604 CD1 TYR 77 29.523 18.598 5.099 1.00118.58 C ATOM 605 CD2 TYR 77 30.676 20.327 6.239 1.00118.58 C ATOM 606 CE1 TYR 77 29.086 18.085 6.294 1.00118.58 C ATOM 607 CE2 TYR 77 30.241 19.816 7.442 1.00118.58 C ATOM 608 CZ TYR 77 29.446 18.694 7.470 1.00118.58 C ATOM 609 OH TYR 77 28.997 18.168 8.700 1.00118.58 O ATOM 610 C TYR 77 29.789 21.412 1.834 1.00118.58 C ATOM 611 O TYR 77 29.466 20.534 1.034 1.00118.58 O ATOM 612 N THR 78 30.255 22.611 1.436 1.00118.53 N ATOM 613 CA THR 78 30.425 22.885 0.040 1.00118.53 C ATOM 614 CB THR 78 29.563 24.009 -0.456 1.00118.53 C ATOM 615 OG1 THR 78 29.874 25.203 0.246 1.00118.53 O ATOM 616 CG2 THR 78 28.086 23.647 -0.243 1.00118.53 C ATOM 617 C THR 78 31.839 23.313 -0.171 1.00118.53 C ATOM 618 O THR 78 32.291 24.302 0.403 1.00118.53 O ATOM 619 N LEU 79 32.585 22.581 -1.015 1.00 68.08 N ATOM 620 CA LEU 79 33.936 22.998 -1.241 1.00 68.08 C ATOM 621 CB LEU 79 34.844 21.881 -1.796 1.00 68.08 C ATOM 622 CG LEU 79 36.314 22.300 -1.980 1.00 68.08 C ATOM 623 CD1 LEU 79 36.880 22.899 -0.686 1.00 68.08 C ATOM 624 CD2 LEU 79 37.165 21.112 -2.459 1.00 68.08 C ATOM 625 C LEU 79 33.875 24.159 -2.183 1.00 68.08 C ATOM 626 O LEU 79 32.956 24.263 -2.993 1.00 68.08 O ATOM 627 N GLU 80 34.841 25.094 -2.063 1.00 89.05 N ATOM 628 CA GLU 80 34.799 26.270 -2.883 1.00 89.05 C ATOM 629 CB GLU 80 34.160 27.447 -2.120 1.00 89.05 C ATOM 630 CG GLU 80 33.875 28.699 -2.948 1.00 89.05 C ATOM 631 CD GLU 80 33.229 29.712 -2.008 1.00 89.05 C ATOM 632 OE1 GLU 80 33.322 29.503 -0.770 1.00 89.05 O ATOM 633 OE2 GLU 80 32.634 30.703 -2.510 1.00 89.05 O ATOM 634 C GLU 80 36.206 26.655 -3.226 1.00 89.05 C ATOM 635 O GLU 80 37.046 26.795 -2.339 1.00 89.05 O ATOM 636 N ILE 81 36.512 26.838 -4.529 1.00110.88 N ATOM 637 CA ILE 81 37.856 27.239 -4.842 1.00110.88 C ATOM 638 CB ILE 81 38.670 26.223 -5.586 1.00110.88 C ATOM 639 CG2 ILE 81 38.738 24.958 -4.719 1.00110.88 C ATOM 640 CG1 ILE 81 38.103 25.982 -6.995 1.00110.88 C ATOM 641 CD1 ILE 81 39.079 25.255 -7.921 1.00110.88 C ATOM 642 C ILE 81 37.814 28.444 -5.723 1.00110.88 C ATOM 643 O ILE 81 37.047 28.504 -6.682 1.00110.88 O ATOM 644 N ASN 82 38.672 29.434 -5.409 1.00 83.51 N ATOM 645 CA ASN 82 38.801 30.631 -6.188 1.00 83.51 C ATOM 646 CB ASN 82 39.421 30.387 -7.579 1.00 83.51 C ATOM 647 CG ASN 82 40.863 29.922 -7.395 1.00 83.51 C ATOM 648 OD1 ASN 82 41.718 30.640 -6.879 1.00 83.51 O ATOM 649 ND2 ASN 82 41.139 28.664 -7.830 1.00 83.51 N ATOM 650 C ASN 82 37.459 31.274 -6.361 1.00 83.51 C ATOM 651 O ASN 82 37.132 31.743 -7.448 1.00 83.51 O ATOM 652 N GLY 83 36.640 31.314 -5.293 1.00 24.14 N ATOM 653 CA GLY 83 35.384 32.000 -5.402 1.00 24.14 C ATOM 654 C GLY 83 34.543 31.286 -6.409 1.00 24.14 C ATOM 655 O GLY 83 33.770 31.909 -7.137 1.00 24.14 O ATOM 656 N LYS 84 34.703 29.950 -6.491 1.00125.48 N ATOM 657 CA LYS 84 33.926 29.140 -7.385 1.00125.48 C ATOM 658 CB LYS 84 34.744 28.474 -8.506 1.00125.48 C ATOM 659 CG LYS 84 34.956 29.348 -9.749 1.00125.48 C ATOM 660 CD LYS 84 33.710 29.517 -10.632 1.00125.48 C ATOM 661 CE LYS 84 32.425 29.846 -9.866 1.00125.48 C ATOM 662 NZ LYS 84 31.253 29.791 -10.774 1.00125.48 N ATOM 663 C LYS 84 33.307 28.050 -6.577 1.00125.48 C ATOM 664 O LYS 84 33.857 27.611 -5.567 1.00125.48 O ATOM 665 N SER 85 32.106 27.615 -6.993 1.00 76.27 N ATOM 666 CA SER 85 31.445 26.563 -6.284 1.00 76.27 C ATOM 667 CB SER 85 29.916 26.616 -6.433 1.00 76.27 C ATOM 668 OG SER 85 29.432 27.872 -5.994 1.00 76.27 O ATOM 669 C SER 85 31.906 25.262 -6.857 1.00 76.27 C ATOM 670 O SER 85 32.072 25.128 -8.067 1.00 76.27 O ATOM 671 N LEU 86 32.136 24.264 -5.975 1.00 64.61 N ATOM 672 CA LEU 86 32.505 22.961 -6.442 1.00 64.61 C ATOM 673 CB LEU 86 33.857 22.446 -5.915 1.00 64.61 C ATOM 674 CG LEU 86 35.052 23.206 -6.521 1.00 64.61 C ATOM 675 CD1 LEU 86 36.377 22.523 -6.144 1.00 64.61 C ATOM 676 CD2 LEU 86 34.865 23.436 -8.036 1.00 64.61 C ATOM 677 C LEU 86 31.408 22.041 -6.018 1.00 64.61 C ATOM 678 O LEU 86 31.130 21.897 -4.830 1.00 64.61 O ATOM 679 N LYS 87 30.744 21.426 -7.020 1.00196.15 N ATOM 680 CA LYS 87 29.613 20.562 -6.789 1.00196.15 C ATOM 681 CB LYS 87 28.681 20.471 -8.030 1.00196.15 C ATOM 682 CG LYS 87 27.439 19.567 -7.962 1.00196.15 C ATOM 683 CD LYS 87 27.687 18.173 -8.531 1.00196.15 C ATOM 684 CE LYS 87 27.770 18.209 -10.063 1.00196.15 C ATOM 685 NZ LYS 87 28.993 18.933 -10.487 1.00196.15 N ATOM 686 C LYS 87 30.089 19.228 -6.293 1.00196.15 C ATOM 687 O LYS 87 31.015 18.639 -6.846 1.00196.15 O ATOM 688 N LYS 88 29.440 18.731 -5.212 1.00143.98 N ATOM 689 CA LYS 88 29.830 17.547 -4.489 1.00143.98 C ATOM 690 CB LYS 88 29.526 17.648 -2.976 1.00143.98 C ATOM 691 CG LYS 88 28.043 17.632 -2.583 1.00143.98 C ATOM 692 CD LYS 88 27.874 17.421 -1.071 1.00143.98 C ATOM 693 CE LYS 88 26.435 17.293 -0.559 1.00143.98 C ATOM 694 NZ LYS 88 26.146 18.321 0.468 1.00143.98 N ATOM 695 C LYS 88 29.206 16.281 -5.013 1.00143.98 C ATOM 696 O LYS 88 28.124 16.286 -5.601 1.00143.98 O ATOM 697 N TYR 89 29.930 15.167 -4.773 1.00330.76 N ATOM 698 CA TYR 89 29.638 13.795 -5.084 1.00330.76 C ATOM 699 CB TYR 89 28.598 13.067 -4.195 1.00330.76 C ATOM 700 CG TYR 89 27.288 13.732 -3.893 1.00330.76 C ATOM 701 CD1 TYR 89 26.190 13.746 -4.744 1.00330.76 C ATOM 702 CD2 TYR 89 27.182 14.340 -2.666 1.00330.76 C ATOM 703 CE1 TYR 89 25.013 14.353 -4.350 1.00330.76 C ATOM 704 CE2 TYR 89 26.016 14.939 -2.275 1.00330.76 C ATOM 705 CZ TYR 89 24.927 14.950 -3.110 1.00330.76 C ATOM 706 OH TYR 89 23.739 15.573 -2.671 1.00330.76 O ATOM 707 C TYR 89 29.422 13.445 -6.518 1.00330.76 C ATOM 708 O TYR 89 28.866 14.206 -7.310 1.00330.76 O ATOM 709 N MET 90 29.940 12.241 -6.837 1.00176.27 N ATOM 710 CA MET 90 29.869 11.496 -8.064 1.00176.27 C ATOM 711 CB MET 90 28.918 10.289 -7.809 1.00176.27 C ATOM 712 CG MET 90 28.580 9.250 -8.895 1.00176.27 C ATOM 713 SD MET 90 27.483 7.879 -8.332 1.00176.27 S ATOM 714 CE MET 90 28.700 6.658 -7.738 1.00176.27 C ATOM 715 C MET 90 29.459 12.350 -9.285 1.00176.27 C ATOM 716 O MET 90 28.279 12.779 -9.315 1.00176.27 O ATOM 717 OXT MET 90 30.310 12.559 -10.201 1.00176.27 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.78 64.6 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 42.04 77.1 118 100.0 118 ARMSMC SURFACE . . . . . . . . 69.72 54.6 108 100.0 108 ARMSMC BURIED . . . . . . . . 43.52 80.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.19 36.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 92.02 36.4 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 89.67 42.3 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 98.94 27.3 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 84.36 48.4 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.47 58.2 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 62.35 63.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 65.21 61.5 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 68.79 54.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 65.45 63.6 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.35 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 72.35 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 66.64 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 73.91 50.0 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 67.48 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.30 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 69.30 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 78.98 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 75.29 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 6.03 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.29 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.29 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0477 CRMSCA SECONDARY STRUCTURE . . 2.55 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.03 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.78 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.39 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 2.75 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.09 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.98 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.25 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.33 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.98 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.12 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.85 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.34 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.02 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.09 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.02 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 102.968 0.925 0.929 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 80.308 0.937 0.940 59 100.0 59 ERRCA SURFACE . . . . . . . . 106.325 0.912 0.917 55 100.0 55 ERRCA BURIED . . . . . . . . 97.692 0.947 0.948 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 103.060 0.925 0.929 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 80.315 0.935 0.938 293 100.0 293 ERRMC SURFACE . . . . . . . . 107.549 0.914 0.919 269 100.0 269 ERRMC BURIED . . . . . . . . 96.080 0.943 0.945 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 107.089 0.902 0.909 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 109.820 0.906 0.912 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 86.170 0.910 0.916 252 100.0 252 ERRSC SURFACE . . . . . . . . 117.610 0.891 0.899 204 100.0 204 ERRSC BURIED . . . . . . . . 92.968 0.917 0.922 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 105.035 0.914 0.920 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 83.325 0.923 0.928 488 100.0 488 ERRALL SURFACE . . . . . . . . 111.799 0.903 0.910 424 100.0 424 ERRALL BURIED . . . . . . . . 95.213 0.931 0.934 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 31 51 75 87 90 90 DISTCA CA (P) 5.56 34.44 56.67 83.33 96.67 90 DISTCA CA (RMS) 0.69 1.46 1.94 2.73 3.80 DISTCA ALL (N) 27 217 356 500 658 716 716 DISTALL ALL (P) 3.77 30.31 49.72 69.83 91.90 716 DISTALL ALL (RMS) 0.70 1.47 1.95 2.64 4.25 DISTALL END of the results output