####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS457_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS457_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 87 3 - 89 4.96 5.55 LONGEST_CONTINUOUS_SEGMENT: 87 4 - 90 4.97 5.58 LCS_AVERAGE: 95.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 5 - 28 1.95 6.11 LCS_AVERAGE: 16.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 0.89 6.28 LCS_AVERAGE: 10.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 6 6 45 3 3 5 6 6 7 8 8 9 11 11 11 11 26 31 33 38 45 50 59 LCS_GDT T 2 T 2 6 6 56 3 4 5 6 6 10 12 15 30 37 46 52 58 61 69 77 77 77 78 82 LCS_GDT D 3 D 3 6 23 87 4 4 5 15 27 34 37 44 50 58 62 68 75 76 79 83 83 85 86 88 LCS_GDT L 4 L 4 6 23 87 4 4 5 17 27 32 37 40 50 59 65 73 75 77 80 83 84 85 86 88 LCS_GDT V 5 V 5 19 24 87 4 16 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 6 A 6 19 24 87 8 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 7 V 7 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT W 8 W 8 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT D 9 D 9 19 24 87 5 18 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 10 V 10 19 24 87 4 12 22 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 11 A 11 19 24 87 5 15 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT L 12 L 12 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT S 13 S 13 19 24 87 6 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT D 14 D 14 19 24 87 6 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 15 G 15 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 16 V 16 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT H 17 H 17 19 24 87 5 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 18 K 18 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT I 19 I 19 19 24 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 20 E 20 19 24 87 7 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT F 21 F 21 19 24 87 9 19 25 29 37 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 22 E 22 19 24 87 4 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT H 23 H 23 19 24 87 3 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 24 G 24 4 24 87 3 4 9 22 31 36 46 51 56 61 68 73 75 78 80 83 84 85 86 88 LCS_GDT T 25 T 25 4 24 87 3 6 17 27 35 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT T 26 T 26 3 24 87 3 3 3 4 9 22 44 50 55 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT S 27 S 27 3 24 87 3 4 7 28 35 42 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 28 G 28 4 24 87 3 4 5 15 32 40 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 29 K 29 4 6 87 3 4 5 6 9 22 33 47 55 60 65 73 75 78 80 83 84 85 86 88 LCS_GDT R 30 R 30 4 8 87 3 4 11 18 32 40 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 31 V 31 6 8 87 3 4 6 7 10 18 26 41 51 59 66 73 75 78 80 83 84 85 86 88 LCS_GDT V 32 V 32 6 8 87 3 5 13 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT Y 33 Y 33 6 8 87 3 7 18 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 34 V 34 6 8 87 3 11 19 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT D 35 D 35 6 8 87 3 5 14 20 28 37 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 36 G 36 6 8 87 3 5 14 20 32 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 37 K 37 6 8 87 3 10 21 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 38 E 38 5 8 87 3 6 8 21 27 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 39 E 39 5 7 87 3 5 5 5 7 13 18 38 48 60 68 73 75 78 80 83 84 85 86 88 LCS_GDT I 40 I 40 4 4 87 3 5 9 19 24 39 47 53 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT R 41 R 41 4 4 87 3 3 9 16 21 39 45 52 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 42 K 42 3 4 87 3 4 10 17 21 32 43 50 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 43 E 43 3 4 87 3 4 4 7 9 11 15 22 37 51 63 68 72 77 80 83 84 85 86 88 LCS_GDT W 44 W 44 3 4 87 3 4 4 4 4 9 10 12 17 21 35 39 46 50 60 66 77 85 86 88 LCS_GDT M 45 M 45 4 4 87 3 3 5 5 7 8 11 18 27 38 42 52 64 72 79 83 84 85 86 88 LCS_GDT F 46 F 46 4 4 87 3 3 5 5 6 8 10 20 25 30 41 54 61 69 77 83 84 85 86 88 LCS_GDT K 47 K 47 4 4 87 3 3 5 5 6 8 14 20 25 33 45 54 61 70 77 83 84 85 86 88 LCS_GDT L 48 L 48 4 4 87 3 3 5 5 6 9 20 24 35 44 55 62 68 75 79 83 84 85 86 88 LCS_GDT V 49 V 49 4 5 87 3 3 4 5 6 15 21 32 48 53 63 68 74 78 80 83 84 85 86 88 LCS_GDT G 50 G 50 4 11 87 3 4 5 8 14 18 30 40 52 60 67 73 75 78 80 83 84 85 86 88 LCS_GDT K 51 K 51 5 11 87 3 4 5 8 12 16 24 38 48 59 67 73 75 78 80 83 84 85 86 88 LCS_GDT E 52 E 52 5 12 87 3 4 6 14 22 34 45 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT T 53 T 53 5 12 87 3 4 7 14 30 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT F 54 F 54 6 15 87 3 11 24 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT Y 55 Y 55 6 15 87 3 11 18 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT V 56 V 56 6 15 87 4 6 18 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 57 G 57 6 15 87 4 5 14 20 28 35 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 58 A 58 6 15 87 4 5 10 11 18 22 35 43 53 60 68 71 75 78 80 83 84 85 86 88 LCS_GDT A 59 A 59 9 15 87 4 6 10 11 18 29 36 50 55 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 60 K 60 9 15 87 3 6 10 11 18 21 35 41 50 59 67 71 74 78 80 83 84 85 86 88 LCS_GDT T 61 T 61 9 15 87 3 6 10 11 18 21 35 43 55 60 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 62 K 62 9 15 87 3 5 10 11 18 21 35 43 55 60 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 63 A 63 9 15 87 3 5 10 11 18 29 36 50 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT T 64 T 64 9 15 87 3 6 10 11 18 32 42 51 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT I 65 I 65 9 15 87 3 6 10 11 18 28 42 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT N 66 N 66 9 15 87 3 6 10 11 18 29 38 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT I 67 I 67 9 15 87 3 6 10 11 18 28 41 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT D 68 D 68 8 15 87 3 5 10 11 17 22 35 47 57 61 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 69 A 69 6 15 87 3 4 7 11 16 23 33 46 52 60 67 73 75 78 80 83 84 85 86 88 LCS_GDT I 70 I 70 5 15 87 3 4 5 9 9 16 24 33 46 52 58 66 71 78 80 83 84 85 86 88 LCS_GDT S 71 S 71 3 15 87 3 4 4 7 13 19 26 37 46 53 63 68 72 78 80 83 84 85 86 88 LCS_GDT G 72 G 72 3 15 87 3 3 6 8 11 11 21 38 50 56 63 70 74 78 80 83 84 85 86 88 LCS_GDT F 73 F 73 13 16 87 4 9 18 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT A 74 A 74 13 16 87 5 14 21 27 35 42 46 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT Y 75 Y 75 13 16 87 4 10 21 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 76 E 76 13 16 87 5 14 21 27 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT Y 77 Y 77 13 16 87 5 14 24 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT T 78 T 78 13 16 87 5 15 24 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT L 79 L 79 13 16 87 7 14 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT E 80 E 80 13 16 87 7 18 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT I 81 I 81 13 16 87 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT N 82 N 82 13 16 87 7 18 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT G 83 G 83 13 16 87 7 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 84 K 84 13 16 87 7 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT S 85 S 85 13 16 87 7 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT L 86 L 86 13 16 87 1 6 16 26 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 87 K 87 6 16 87 3 5 8 19 30 40 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT K 88 K 88 4 16 87 3 5 11 29 35 40 47 54 57 62 68 73 75 78 80 83 84 85 86 88 LCS_GDT Y 89 Y 89 4 4 87 3 3 4 5 6 7 20 30 44 55 60 66 68 73 74 79 82 84 85 88 LCS_GDT M 90 M 90 4 4 87 3 3 4 5 12 22 33 43 52 58 60 66 70 74 76 79 84 85 86 88 LCS_AVERAGE LCS_A: 41.02 ( 10.56 16.73 95.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 19 25 29 38 43 47 54 57 62 68 73 75 78 80 83 84 85 86 88 GDT PERCENT_AT 10.00 21.11 27.78 32.22 42.22 47.78 52.22 60.00 63.33 68.89 75.56 81.11 83.33 86.67 88.89 92.22 93.33 94.44 95.56 97.78 GDT RMS_LOCAL 0.29 0.74 0.91 1.12 1.69 1.92 2.07 2.48 2.63 2.97 3.31 3.63 3.75 4.13 4.26 4.50 4.71 4.76 4.82 5.02 GDT RMS_ALL_AT 6.98 6.43 6.33 6.20 5.86 5.84 5.87 5.79 5.83 5.72 5.76 5.66 5.68 5.60 5.59 5.55 5.59 5.57 5.55 5.56 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: D 35 D 35 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 17.857 0 0.449 1.298 23.027 0.000 0.000 LGA T 2 T 2 12.236 0 0.035 0.078 14.705 1.310 0.748 LGA D 3 D 3 7.066 0 0.521 1.170 9.355 7.143 8.214 LGA L 4 L 4 6.638 0 0.156 1.355 11.882 28.333 14.524 LGA V 5 V 5 1.411 0 0.604 0.979 5.346 67.262 52.857 LGA A 6 A 6 1.778 0 0.054 0.066 1.930 72.857 72.857 LGA V 7 V 7 1.990 0 0.055 0.050 2.552 72.857 68.299 LGA W 8 W 8 1.125 0 0.095 0.198 1.747 77.143 84.728 LGA D 9 D 9 0.452 0 0.286 0.999 4.380 92.976 74.940 LGA V 10 V 10 1.502 0 0.227 1.120 3.327 81.548 72.245 LGA A 11 A 11 1.094 0 0.112 0.104 1.167 81.429 81.429 LGA L 12 L 12 1.545 0 0.024 1.010 5.490 77.143 66.190 LGA S 13 S 13 2.119 0 0.092 0.178 2.488 66.786 66.111 LGA D 14 D 14 1.692 0 0.325 1.246 4.200 72.857 66.369 LGA G 15 G 15 1.975 0 0.024 0.024 1.975 77.143 77.143 LGA V 16 V 16 1.146 0 0.035 1.114 2.615 75.119 73.265 LGA H 17 H 17 1.976 0 0.063 1.140 5.173 75.000 60.952 LGA K 18 K 18 1.838 0 0.028 0.825 2.904 70.833 64.921 LGA I 19 I 19 2.004 0 0.112 0.146 2.561 70.833 66.845 LGA E 20 E 20 1.646 0 0.219 0.689 3.443 70.833 62.751 LGA F 21 F 21 2.579 0 0.222 0.429 4.639 62.857 47.749 LGA E 22 E 22 1.940 0 0.295 0.713 4.307 66.786 61.905 LGA H 23 H 23 2.511 0 0.600 1.297 5.063 62.976 57.762 LGA G 24 G 24 5.395 0 0.039 0.039 5.395 28.810 28.810 LGA T 25 T 25 3.515 0 0.056 0.087 4.498 43.333 42.449 LGA T 26 T 26 5.688 0 0.598 0.657 8.912 23.095 15.034 LGA S 27 S 27 3.318 0 0.173 0.201 3.318 50.000 55.000 LGA G 28 G 28 3.660 0 0.635 0.635 4.722 42.024 42.024 LGA K 29 K 29 5.763 0 0.144 1.203 13.264 28.929 14.180 LGA R 30 R 30 4.142 0 0.476 0.398 14.138 27.024 13.593 LGA V 31 V 31 6.074 0 0.450 1.403 10.541 26.548 16.054 LGA V 32 V 32 2.428 0 0.293 0.308 3.542 59.405 68.844 LGA Y 33 Y 33 2.025 0 0.489 0.471 5.625 68.929 48.175 LGA V 34 V 34 2.378 0 0.355 1.050 4.536 57.500 54.762 LGA D 35 D 35 3.596 0 0.303 0.257 5.107 48.333 42.143 LGA G 36 G 36 3.045 0 0.217 0.217 3.405 51.786 51.786 LGA K 37 K 37 1.671 0 0.055 0.846 3.515 70.833 65.238 LGA E 38 E 38 2.909 0 0.610 0.892 6.586 57.262 40.529 LGA E 39 E 39 5.229 0 0.099 0.923 9.161 34.524 17.778 LGA I 40 I 40 4.932 0 0.622 0.938 8.462 34.286 21.905 LGA R 41 R 41 5.254 0 0.592 1.315 7.390 27.500 20.390 LGA K 42 K 42 6.655 0 0.596 1.070 13.903 15.238 7.407 LGA E 43 E 43 9.520 0 0.190 1.522 15.412 1.310 0.582 LGA W 44 W 44 12.578 0 0.593 0.909 23.587 0.000 0.000 LGA M 45 M 45 10.212 0 0.648 1.097 11.141 0.119 1.607 LGA F 46 F 46 12.651 0 0.054 1.283 17.525 0.000 0.000 LGA K 47 K 47 12.834 0 0.516 1.107 15.491 0.119 0.053 LGA L 48 L 48 9.940 0 0.089 1.346 11.825 2.619 1.369 LGA V 49 V 49 9.345 0 0.607 1.436 12.991 3.690 2.109 LGA G 50 G 50 7.266 0 0.662 0.662 9.378 5.833 5.833 LGA K 51 K 51 6.842 0 0.192 1.068 13.012 31.667 14.921 LGA E 52 E 52 3.864 0 0.184 1.057 8.364 30.952 19.735 LGA T 53 T 53 2.633 0 0.061 0.539 4.819 73.452 58.912 LGA F 54 F 54 1.293 0 0.458 0.525 6.060 81.548 51.472 LGA Y 55 Y 55 1.933 0 0.106 0.296 2.479 70.833 69.484 LGA V 56 V 56 1.781 0 0.320 0.299 2.066 72.976 72.925 LGA G 57 G 57 4.275 0 0.162 0.162 5.608 32.024 32.024 LGA A 58 A 58 7.044 0 0.189 0.196 7.870 12.976 11.810 LGA A 59 A 59 6.167 0 0.705 0.662 6.167 22.857 22.571 LGA K 60 K 60 7.463 0 0.271 1.061 15.903 10.000 4.762 LGA T 61 T 61 6.400 0 0.090 1.006 8.468 17.262 16.735 LGA K 62 K 62 6.280 0 0.103 0.162 7.545 16.190 13.175 LGA A 63 A 63 5.017 0 0.360 0.377 5.825 25.000 25.238 LGA T 64 T 64 4.912 0 0.232 0.249 5.582 30.119 27.755 LGA I 65 I 65 4.182 0 0.094 0.153 4.342 37.143 38.690 LGA N 66 N 66 4.516 0 0.038 0.406 4.852 32.857 34.345 LGA I 67 I 67 4.494 0 0.168 1.252 5.638 31.667 32.500 LGA D 68 D 68 5.991 0 0.200 0.267 7.100 17.738 16.012 LGA A 69 A 69 7.936 0 0.383 0.488 9.543 5.595 5.429 LGA I 70 I 70 11.676 0 0.575 1.393 13.049 0.000 0.000 LGA S 71 S 71 12.186 0 0.464 0.866 13.410 0.000 0.000 LGA G 72 G 72 9.665 0 0.072 0.072 10.372 8.810 8.810 LGA F 73 F 73 2.294 0 0.169 1.008 5.957 53.214 49.004 LGA A 74 A 74 3.592 0 0.025 0.043 6.033 48.452 42.190 LGA Y 75 Y 75 2.468 0 0.457 0.606 4.250 59.048 56.389 LGA E 76 E 76 2.328 0 0.102 0.553 3.294 68.810 61.693 LGA Y 77 Y 77 1.040 0 0.088 0.323 3.748 81.548 70.873 LGA T 78 T 78 0.910 0 0.095 0.565 2.227 90.476 85.510 LGA L 79 L 79 0.887 0 0.024 0.172 1.145 90.595 88.274 LGA E 80 E 80 0.637 0 0.117 0.648 2.042 88.214 84.603 LGA I 81 I 81 1.004 0 0.068 0.118 1.489 83.690 83.690 LGA N 82 N 82 2.287 0 0.097 0.097 2.699 66.786 62.917 LGA G 83 G 83 2.194 0 0.287 0.287 3.268 61.071 61.071 LGA K 84 K 84 1.550 0 0.228 1.132 6.313 70.833 52.434 LGA S 85 S 85 0.715 0 0.178 0.539 2.473 85.952 81.667 LGA L 86 L 86 2.536 0 0.480 1.415 6.941 57.619 46.964 LGA K 87 K 87 3.276 0 0.601 1.080 5.523 55.476 41.746 LGA K 88 K 88 3.771 0 0.152 1.169 8.936 28.810 21.111 LGA Y 89 Y 89 8.870 0 0.490 1.215 15.895 7.381 2.460 LGA M 90 M 90 7.918 0 0.564 1.440 11.290 3.095 12.083 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 5.523 5.394 6.663 44.487 39.583 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 54 2.48 51.389 44.816 2.089 LGA_LOCAL RMSD: 2.485 Number of atoms: 54 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.793 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 5.523 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.882284 * X + 0.018247 * Y + 0.470364 * Z + 21.543068 Y_new = -0.383064 * X + 0.608560 * Y + 0.694922 * Z + 12.975611 Z_new = -0.273564 * X + -0.793298 * Y + 0.543913 * Z + 8.077374 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.409615 0.277097 -0.969777 [DEG: -23.4692 15.8765 -55.5641 ] ZXZ: 2.546567 0.995704 -2.809518 [DEG: 145.9075 57.0496 -160.9735 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS457_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS457_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 54 2.48 44.816 5.52 REMARK ---------------------------------------------------------- MOLECULE T0540TS457_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2kd2_A ATOM 1 N MET 1 21.875 10.958 7.509 1.00 0.50 N ATOM 2 CA MET 1 21.398 11.790 8.608 1.00 0.50 C ATOM 3 C MET 1 22.457 11.925 9.695 1.00 0.50 C ATOM 4 O MET 1 22.439 12.876 10.478 1.00 0.50 O ATOM 5 CB MET 1 20.112 11.208 9.203 1.00 0.50 C ATOM 6 CG MET 1 19.501 12.076 10.294 1.00 0.50 C ATOM 7 SD MET 1 18.960 13.684 9.667 1.00 0.50 S ATOM 8 CE MET 1 17.513 13.204 8.731 1.00 0.50 C ATOM 20 N THR 2 23.378 10.969 9.740 1.00 0.50 N ATOM 21 CA THR 2 24.437 10.971 10.742 1.00 0.50 C ATOM 22 C THR 2 25.810 11.084 10.092 1.00 0.50 C ATOM 23 O THR 2 26.744 11.629 10.681 1.00 0.50 O ATOM 24 CB THR 2 24.386 9.693 11.609 1.00 0.50 C ATOM 25 OG1 THR 2 24.587 8.554 10.763 1.00 0.50 O ATOM 26 CG2 THR 2 23.044 9.561 12.316 1.00 0.50 C ATOM 34 N ASP 3 25.927 10.563 8.875 1.00 0.50 N ATOM 35 CA ASP 3 27.197 10.569 8.159 1.00 0.50 C ATOM 36 C ASP 3 27.136 11.476 6.936 1.00 0.50 C ATOM 37 O ASP 3 26.136 11.500 6.219 1.00 0.50 O ATOM 38 CB ASP 3 27.579 9.147 7.738 1.00 0.50 C ATOM 39 CG ASP 3 27.911 8.246 8.912 1.00 0.50 C ATOM 40 OD1 ASP 3 28.544 8.713 9.883 1.00 0.50 O ATOM 41 OD2 ASP 3 27.536 7.054 8.862 1.00 0.50 O ATOM 46 N LEU 4 28.210 12.224 6.706 1.00 0.50 N ATOM 47 CA LEU 4 28.226 13.241 5.662 1.00 0.50 C ATOM 48 C LEU 4 29.616 13.391 5.060 1.00 0.50 C ATOM 49 O LEU 4 30.440 14.159 5.558 1.00 0.50 O ATOM 50 CB LEU 4 27.759 14.588 6.225 1.00 0.50 C ATOM 51 CG LEU 4 26.293 14.668 6.661 1.00 0.50 C ATOM 52 CD1 LEU 4 26.061 15.922 7.495 1.00 0.50 C ATOM 53 CD2 LEU 4 25.382 14.662 5.441 1.00 0.50 C ATOM 65 N VAL 5 29.873 12.653 3.985 1.00 0.50 N ATOM 66 CA VAL 5 31.155 12.727 3.294 1.00 0.50 C ATOM 67 C VAL 5 30.966 13.059 1.819 1.00 0.50 C ATOM 68 O VAL 5 30.382 12.279 1.067 1.00 0.50 O ATOM 69 CB VAL 5 31.940 11.403 3.425 1.00 0.50 C ATOM 70 CG1 VAL 5 33.269 11.487 2.683 1.00 0.50 C ATOM 71 CG2 VAL 5 32.176 11.068 4.893 1.00 0.50 C ATOM 81 N ALA 6 31.464 14.222 1.412 1.00 0.50 N ATOM 82 CA ALA 6 31.338 14.667 0.029 1.00 0.50 C ATOM 83 C ALA 6 32.611 14.384 -0.759 1.00 0.50 C ATOM 84 O ALA 6 33.699 14.296 -0.188 1.00 0.50 O ATOM 85 CB ALA 6 31.016 16.158 -0.017 1.00 0.50 C ATOM 91 N VAL 7 32.469 14.243 -2.071 1.00 0.50 N ATOM 92 CA VAL 7 33.607 13.965 -2.940 1.00 0.50 C ATOM 93 C VAL 7 33.715 14.997 -4.054 1.00 0.50 C ATOM 94 O VAL 7 32.712 15.387 -4.651 1.00 0.50 O ATOM 95 CB VAL 7 33.510 12.552 -3.558 1.00 0.50 C ATOM 96 CG1 VAL 7 34.687 12.288 -4.490 1.00 0.50 C ATOM 97 CG2 VAL 7 33.459 11.495 -2.461 1.00 0.50 C ATOM 107 N TRP 8 34.938 15.438 -4.329 1.00 0.50 N ATOM 108 CA TRP 8 35.182 16.407 -5.392 1.00 0.50 C ATOM 109 C TRP 8 36.399 16.019 -6.221 1.00 0.50 C ATOM 110 O TRP 8 37.242 15.240 -5.777 1.00 0.50 O ATOM 111 CB TRP 8 35.378 17.810 -4.802 1.00 0.50 C ATOM 112 CG TRP 8 34.206 18.304 -4.006 1.00 0.50 C ATOM 113 CD1 TRP 8 33.038 18.820 -4.498 1.00 0.50 C ATOM 114 CD2 TRP 8 34.092 18.331 -2.579 1.00 0.50 C ATOM 115 NE1 TRP 8 32.204 19.164 -3.460 1.00 0.50 N ATOM 116 CE2 TRP 8 32.826 18.875 -2.275 1.00 0.50 C ATOM 117 CE3 TRP 8 34.938 17.946 -1.532 1.00 0.50 C ATOM 118 CZ2 TRP 8 32.383 19.046 -0.960 1.00 0.50 C ATOM 119 CZ3 TRP 8 34.498 18.116 -0.224 1.00 0.50 C ATOM 120 CH2 TRP 8 33.233 18.661 0.049 1.00 0.50 H ATOM 131 N ASP 9 36.484 16.566 -7.429 1.00 0.50 N ATOM 132 CA ASP 9 37.613 16.299 -8.313 1.00 0.50 C ATOM 133 C ASP 9 38.295 17.593 -8.742 1.00 0.50 C ATOM 134 O ASP 9 38.189 18.008 -9.896 1.00 0.50 O ATOM 135 CB ASP 9 37.151 15.516 -9.547 1.00 0.50 C ATOM 136 CG ASP 9 38.299 15.051 -10.421 1.00 0.50 C ATOM 137 OD1 ASP 9 39.457 15.022 -9.951 1.00 0.50 O ATOM 138 OD2 ASP 9 38.040 14.714 -11.599 1.00 0.50 O ATOM 143 N VAL 10 38.993 18.226 -7.805 1.00 0.50 N ATOM 144 CA VAL 10 39.640 19.505 -8.067 1.00 0.50 C ATOM 145 C VAL 10 40.663 19.386 -9.188 1.00 0.50 C ATOM 146 O VAL 10 41.650 18.659 -9.068 1.00 0.50 O ATOM 147 CB VAL 10 40.333 20.054 -6.799 1.00 0.50 C ATOM 148 CG1 VAL 10 41.037 21.373 -7.095 1.00 0.50 C ATOM 149 CG2 VAL 10 39.316 20.240 -5.677 1.00 0.50 C ATOM 159 N ALA 11 40.422 20.102 -10.282 1.00 0.50 N ATOM 160 CA ALA 11 41.323 20.078 -11.428 1.00 0.50 C ATOM 161 C ALA 11 42.167 21.345 -11.491 1.00 0.50 C ATOM 162 O ALA 11 41.657 22.427 -11.783 1.00 0.50 O ATOM 163 CB ALA 11 40.529 19.915 -12.721 1.00 0.50 C ATOM 169 N LEU 12 43.458 21.204 -11.215 1.00 0.50 N ATOM 170 CA LEU 12 44.399 22.309 -11.362 1.00 0.50 C ATOM 171 C LEU 12 45.162 22.212 -12.677 1.00 0.50 C ATOM 172 O LEU 12 45.029 21.233 -13.412 1.00 0.50 O ATOM 173 CB LEU 12 45.388 22.323 -10.191 1.00 0.50 C ATOM 174 CG LEU 12 45.866 23.701 -9.725 1.00 0.50 C ATOM 175 CD1 LEU 12 45.929 23.748 -8.203 1.00 0.50 C ATOM 176 CD2 LEU 12 47.230 24.014 -10.326 1.00 0.50 C ATOM 188 N SER 13 45.960 23.233 -12.969 1.00 0.50 N ATOM 189 CA SER 13 46.779 23.244 -14.176 1.00 0.50 C ATOM 190 C SER 13 47.919 22.240 -14.077 1.00 0.50 C ATOM 191 O SER 13 48.508 21.853 -15.086 1.00 0.50 O ATOM 192 CB SER 13 47.343 24.645 -14.424 1.00 0.50 C ATOM 193 OG SER 13 48.262 24.999 -13.403 1.00 0.50 O ATOM 199 N ASP 14 48.227 21.820 -12.854 1.00 0.50 N ATOM 200 CA ASP 14 49.275 20.833 -12.624 1.00 0.50 C ATOM 201 C ASP 14 48.745 19.416 -12.802 1.00 0.50 C ATOM 202 O ASP 14 49.347 18.602 -13.503 1.00 0.50 O ATOM 203 CB ASP 14 49.867 20.999 -11.220 1.00 0.50 C ATOM 204 CG ASP 14 50.766 22.213 -11.092 1.00 0.50 C ATOM 205 OD1 ASP 14 51.150 22.804 -12.124 1.00 0.50 O ATOM 206 OD2 ASP 14 51.097 22.580 -9.943 1.00 0.50 O ATOM 211 N GLY 15 47.618 19.126 -12.162 1.00 0.50 N ATOM 212 CA GLY 15 47.065 17.777 -12.156 1.00 0.50 C ATOM 213 C GLY 15 45.653 17.763 -11.584 1.00 0.50 C ATOM 214 O GLY 15 45.053 18.814 -11.360 1.00 0.50 O ATOM 218 N VAL 16 45.125 16.565 -11.353 1.00 0.50 N ATOM 219 CA VAL 16 43.797 16.412 -10.775 1.00 0.50 C ATOM 220 C VAL 16 43.865 15.745 -9.407 1.00 0.50 C ATOM 221 O VAL 16 44.725 14.901 -9.160 1.00 0.50 O ATOM 222 CB VAL 16 42.873 15.589 -11.701 1.00 0.50 C ATOM 223 CG1 VAL 16 41.450 15.558 -11.157 1.00 0.50 C ATOM 224 CG2 VAL 16 42.885 16.166 -13.113 1.00 0.50 C ATOM 234 N HIS 17 42.954 16.132 -8.520 1.00 0.50 N ATOM 235 CA HIS 17 42.881 15.540 -7.189 1.00 0.50 C ATOM 236 C HIS 17 41.434 15.343 -6.753 1.00 0.50 C ATOM 237 O HIS 17 40.510 15.853 -7.386 1.00 0.50 O ATOM 238 CB HIS 17 43.614 16.424 -6.171 1.00 0.50 C ATOM 239 CG HIS 17 45.073 16.582 -6.469 1.00 0.50 C ATOM 240 ND1 HIS 17 46.002 15.602 -6.197 1.00 0.50 N ATOM 241 CD2 HIS 17 45.754 17.618 -7.024 1.00 0.50 C ATOM 242 CE1 HIS 17 47.200 16.030 -6.573 1.00 0.50 C ATOM 243 NE2 HIS 17 47.076 17.248 -7.076 1.00 0.50 N ATOM 251 N LYS 18 41.246 14.599 -5.669 1.00 0.50 N ATOM 252 CA LYS 18 39.911 14.335 -5.144 1.00 0.50 C ATOM 253 C LYS 18 39.773 14.838 -3.713 1.00 0.50 C ATOM 254 O LYS 18 40.611 14.547 -2.859 1.00 0.50 O ATOM 255 CB LYS 18 39.601 12.836 -5.200 1.00 0.50 C ATOM 256 CG LYS 18 39.522 12.279 -6.613 1.00 0.50 C ATOM 257 CD LYS 18 39.173 10.797 -6.607 1.00 0.50 C ATOM 258 CE LYS 18 39.173 10.211 -8.014 1.00 0.50 C ATOM 259 NZ LYS 18 38.839 8.758 -8.009 1.00 0.50 N ATOM 273 N ILE 19 38.711 15.595 -3.456 1.00 0.50 N ATOM 274 CA ILE 19 38.461 16.140 -2.128 1.00 0.50 C ATOM 275 C ILE 19 37.614 15.189 -1.292 1.00 0.50 C ATOM 276 O ILE 19 36.451 14.940 -1.608 1.00 0.50 O ATOM 277 CB ILE 19 37.758 17.516 -2.211 1.00 0.50 C ATOM 278 CG1 ILE 19 38.530 18.450 -3.151 1.00 0.50 C ATOM 279 CG2 ILE 19 37.622 18.138 -0.821 1.00 0.50 C ATOM 280 CD1 ILE 19 37.784 19.732 -3.489 1.00 0.50 C ATOM 292 N GLU 20 38.204 14.659 -0.227 1.00 0.50 N ATOM 293 CA GLU 20 37.504 13.733 0.656 1.00 0.50 C ATOM 294 C GLU 20 36.878 14.464 1.836 1.00 0.50 C ATOM 295 O GLU 20 37.545 14.733 2.835 1.00 0.50 O ATOM 296 CB GLU 20 38.462 12.650 1.163 1.00 0.50 C ATOM 297 CG GLU 20 37.780 11.568 1.990 1.00 0.50 C ATOM 298 CD GLU 20 38.527 10.246 1.980 1.00 0.50 C ATOM 299 OE1 GLU 20 39.735 10.223 2.301 1.00 0.50 O ATOM 300 OE2 GLU 20 37.894 9.217 1.636 1.00 0.50 O ATOM 307 N PHE 21 35.595 14.785 1.715 1.00 0.50 N ATOM 308 CA PHE 21 34.877 15.486 2.771 1.00 0.50 C ATOM 309 C PHE 21 34.493 14.537 3.900 1.00 0.50 C ATOM 310 O PHE 21 33.355 14.073 3.975 1.00 0.50 O ATOM 311 CB PHE 21 33.617 16.160 2.209 1.00 0.50 C ATOM 312 CG PHE 21 32.941 17.089 3.185 1.00 0.50 C ATOM 313 CD1 PHE 21 33.612 17.538 4.318 1.00 0.50 C ATOM 314 CD2 PHE 21 31.635 17.513 2.966 1.00 0.50 C ATOM 315 CE1 PHE 21 32.989 18.396 5.221 1.00 0.50 C ATOM 316 CE2 PHE 21 31.004 18.371 3.864 1.00 0.50 C ATOM 317 CZ PHE 21 31.685 18.812 4.992 1.00 0.50 C ATOM 327 N GLU 22 35.450 14.250 4.776 1.00 0.50 N ATOM 328 CA GLU 22 35.214 13.355 5.903 1.00 0.50 C ATOM 329 C GLU 22 34.525 14.083 7.050 1.00 0.50 C ATOM 330 O GLU 22 35.161 14.442 8.041 1.00 0.50 O ATOM 331 CB GLU 22 36.534 12.749 6.390 1.00 0.50 C ATOM 332 CG GLU 22 36.579 11.228 6.306 1.00 0.50 C ATOM 333 CD GLU 22 37.781 10.705 5.542 1.00 0.50 C ATOM 334 OE1 GLU 22 38.137 11.281 4.491 1.00 0.50 O ATOM 335 OE2 GLU 22 38.372 9.696 5.998 1.00 0.50 O ATOM 342 N HIS 23 33.222 14.300 6.909 1.00 0.50 N ATOM 343 CA HIS 23 32.444 14.987 7.934 1.00 0.50 C ATOM 344 C HIS 23 31.523 14.020 8.667 1.00 0.50 C ATOM 345 O HIS 23 30.817 14.405 9.598 1.00 0.50 O ATOM 346 CB HIS 23 31.616 16.118 7.307 1.00 0.50 C ATOM 347 CG HIS 23 30.629 16.722 8.259 1.00 0.50 C ATOM 348 ND1 HIS 23 29.303 16.349 8.295 1.00 0.50 N ATOM 349 CD2 HIS 23 30.790 17.676 9.211 1.00 0.50 C ATOM 350 CE1 HIS 23 28.686 17.053 9.234 1.00 0.50 C ATOM 351 NE2 HIS 23 29.566 17.864 9.803 1.00 0.50 N ATOM 359 N GLY 24 31.535 12.761 8.240 1.00 0.50 N ATOM 360 CA GLY 24 30.700 11.736 8.855 1.00 0.50 C ATOM 361 C GLY 24 30.528 11.988 10.348 1.00 0.50 C ATOM 362 O GLY 24 31.471 11.842 11.125 1.00 0.50 O ATOM 366 N THR 25 29.318 12.371 10.742 1.00 0.50 N ATOM 367 CA THR 25 29.020 12.645 12.143 1.00 0.50 C ATOM 368 C THR 25 30.274 13.057 12.903 1.00 0.50 C ATOM 369 O THR 25 30.211 13.408 14.081 1.00 0.50 O ATOM 370 CB THR 25 28.391 11.413 12.831 1.00 0.50 C ATOM 371 OG1 THR 25 29.162 10.253 12.493 1.00 0.50 O ATOM 372 CG2 THR 25 26.951 11.208 12.379 1.00 0.50 C ATOM 380 N THR 26 31.414 13.011 12.222 1.00 0.50 N ATOM 381 CA THR 26 32.687 13.378 12.831 1.00 0.50 C ATOM 382 C THR 26 32.660 14.815 13.337 1.00 0.50 C ATOM 383 O THR 26 32.373 15.744 12.582 1.00 0.50 O ATOM 384 CB THR 26 33.852 13.212 11.830 1.00 0.50 C ATOM 385 OG1 THR 26 33.890 11.849 11.390 1.00 0.50 O ATOM 386 CG2 THR 26 35.185 13.567 12.476 1.00 0.50 C ATOM 394 N SER 27 32.960 14.991 14.620 1.00 0.50 N ATOM 395 CA SER 27 32.970 16.315 15.230 1.00 0.50 C ATOM 396 C SER 27 34.052 17.196 14.615 1.00 0.50 C ATOM 397 O SER 27 34.508 18.157 15.235 1.00 0.50 O ATOM 398 CB SER 27 33.188 16.204 16.741 1.00 0.50 C ATOM 399 OG SER 27 34.474 15.675 17.020 1.00 0.50 O ATOM 405 N GLY 28 34.458 16.860 13.396 1.00 0.50 N ATOM 406 CA GLY 28 35.488 17.619 12.695 1.00 0.50 C ATOM 407 C GLY 28 35.306 17.532 11.186 1.00 0.50 C ATOM 408 O GLY 28 34.904 16.494 10.659 1.00 0.50 O ATOM 412 N LYS 29 35.601 18.627 10.495 1.00 0.50 N ATOM 413 CA LYS 29 35.471 18.676 9.043 1.00 0.50 C ATOM 414 C LYS 29 36.763 18.250 8.359 1.00 0.50 C ATOM 415 O LYS 29 37.750 18.986 8.363 1.00 0.50 O ATOM 416 CB LYS 29 35.083 20.086 8.588 1.00 0.50 C ATOM 417 CG LYS 29 33.981 20.719 9.424 1.00 0.50 C ATOM 418 CD LYS 29 32.974 21.456 8.551 1.00 0.50 C ATOM 419 CE LYS 29 32.105 20.490 7.754 1.00 0.50 C ATOM 420 NZ LYS 29 31.213 21.208 6.799 1.00 0.50 N ATOM 434 N ARG 30 36.752 17.057 7.774 1.00 0.50 N ATOM 435 CA ARG 30 37.924 16.531 7.085 1.00 0.50 C ATOM 436 C ARG 30 37.757 16.614 5.572 1.00 0.50 C ATOM 437 O ARG 30 38.215 15.738 4.839 1.00 0.50 O ATOM 438 CB ARG 30 38.183 15.080 7.499 1.00 0.50 C ATOM 439 CG ARG 30 38.515 14.917 8.975 1.00 0.50 C ATOM 440 CD ARG 30 38.966 13.498 9.294 1.00 0.50 C ATOM 441 NE ARG 30 39.391 13.366 10.684 1.00 0.50 N ATOM 442 CZ ARG 30 39.828 12.240 11.244 1.00 0.50 C ATOM 443 NH1 ARG 30 40.090 11.165 10.502 1.00 0.50 H ATOM 444 NH2 ARG 30 39.994 12.183 12.563 1.00 0.50 H ATOM 458 N VAL 31 37.096 17.671 5.113 1.00 0.50 N ATOM 459 CA VAL 31 36.867 17.869 3.686 1.00 0.50 C ATOM 460 C VAL 31 37.952 18.745 3.071 1.00 0.50 C ATOM 461 O VAL 31 37.684 19.542 2.172 1.00 0.50 O ATOM 462 CB VAL 31 35.484 18.505 3.424 1.00 0.50 C ATOM 463 CG1 VAL 31 35.430 19.927 3.973 1.00 0.50 C ATOM 464 CG2 VAL 31 35.174 18.505 1.931 1.00 0.50 C ATOM 474 N VAL 32 39.177 18.592 3.562 1.00 0.50 N ATOM 475 CA VAL 32 40.305 19.368 3.060 1.00 0.50 C ATOM 476 C VAL 32 41.461 18.462 2.656 1.00 0.50 C ATOM 477 O VAL 32 42.517 18.468 3.288 1.00 0.50 O ATOM 478 CB VAL 32 40.796 20.388 4.112 1.00 0.50 C ATOM 479 CG1 VAL 32 42.012 21.152 3.598 1.00 0.50 C ATOM 480 CG2 VAL 32 39.677 21.359 4.473 1.00 0.50 C ATOM 490 N TYR 33 41.253 17.682 1.601 1.00 0.50 N ATOM 491 CA TYR 33 42.279 16.768 1.110 1.00 0.50 C ATOM 492 C TYR 33 43.289 17.494 0.231 1.00 0.50 C ATOM 493 O TYR 33 43.760 16.952 -0.769 1.00 0.50 O ATOM 494 CB TYR 33 41.637 15.619 0.319 1.00 0.50 C ATOM 495 CG TYR 33 40.751 14.726 1.159 1.00 0.50 C ATOM 496 CD1 TYR 33 39.375 14.933 1.216 1.00 0.50 C ATOM 497 CD2 TYR 33 41.294 13.675 1.896 1.00 0.50 C ATOM 498 CE1 TYR 33 38.557 14.115 1.990 1.00 0.50 C ATOM 499 CE2 TYR 33 40.485 12.851 2.672 1.00 0.50 C ATOM 500 CZ TYR 33 39.120 13.079 2.713 1.00 0.50 C ATOM 501 OH TYR 33 38.317 12.264 3.480 1.00 0.50 H ATOM 511 N VAL 34 43.620 18.725 0.611 1.00 0.50 N ATOM 512 CA VAL 34 44.576 19.527 -0.142 1.00 0.50 C ATOM 513 C VAL 34 45.000 18.821 -1.423 1.00 0.50 C ATOM 514 O VAL 34 44.160 18.383 -2.209 1.00 0.50 O ATOM 515 CB VAL 34 45.828 19.849 0.704 1.00 0.50 C ATOM 516 CG1 VAL 34 45.452 20.665 1.936 1.00 0.50 C ATOM 517 CG2 VAL 34 46.533 18.562 1.120 1.00 0.50 C ATOM 527 N ASP 35 46.308 18.717 -1.629 1.00 0.50 N ATOM 528 CA ASP 35 46.847 18.064 -2.816 1.00 0.50 C ATOM 529 C ASP 35 47.017 16.567 -2.593 1.00 0.50 C ATOM 530 O ASP 35 47.039 15.786 -3.545 1.00 0.50 O ATOM 531 CB ASP 35 48.189 18.691 -3.207 1.00 0.50 C ATOM 532 CG ASP 35 48.064 20.132 -3.662 1.00 0.50 C ATOM 533 OD1 ASP 35 49.096 20.819 -3.816 1.00 0.50 O ATOM 534 OD2 ASP 35 46.915 20.584 -3.866 1.00 0.50 O ATOM 539 N GLY 36 47.137 16.173 -1.329 1.00 0.50 N ATOM 540 CA GLY 36 47.306 14.768 -0.978 1.00 0.50 C ATOM 541 C GLY 36 48.409 14.587 0.056 1.00 0.50 C ATOM 542 O GLY 36 49.206 13.653 -0.029 1.00 0.50 O ATOM 546 N LYS 37 48.450 15.487 1.033 1.00 0.50 N ATOM 547 CA LYS 37 49.457 15.429 2.086 1.00 0.50 C ATOM 548 C LYS 37 48.813 15.228 3.453 1.00 0.50 C ATOM 549 O LYS 37 47.730 15.748 3.721 1.00 0.50 O ATOM 550 CB LYS 37 50.299 16.707 2.093 1.00 0.50 C ATOM 551 CG LYS 37 51.161 16.881 0.851 1.00 0.50 C ATOM 552 CD LYS 37 52.006 18.145 0.933 1.00 0.50 C ATOM 553 CE LYS 37 52.871 18.325 -0.309 1.00 0.50 C ATOM 554 NZ LYS 37 53.706 19.558 -0.226 1.00 0.50 N ATOM 568 N GLU 38 49.485 14.470 4.312 1.00 0.50 N ATOM 569 CA GLU 38 48.979 14.199 5.652 1.00 0.50 C ATOM 570 C GLU 38 49.168 15.403 6.567 1.00 0.50 C ATOM 571 O GLU 38 48.336 15.672 7.433 1.00 0.50 O ATOM 572 CB GLU 38 49.681 12.976 6.252 1.00 0.50 C ATOM 573 CG GLU 38 49.766 13.002 7.773 1.00 0.50 C ATOM 574 CD GLU 38 50.584 11.860 8.347 1.00 0.50 C ATOM 575 OE1 GLU 38 51.760 11.692 7.958 1.00 0.50 O ATOM 576 OE2 GLU 38 50.035 11.114 9.194 1.00 0.50 O ATOM 583 N GLU 39 50.266 16.124 6.368 1.00 0.50 N ATOM 584 CA GLU 39 50.565 17.302 7.174 1.00 0.50 C ATOM 585 C GLU 39 49.558 18.415 6.919 1.00 0.50 C ATOM 586 O GLU 39 49.014 18.999 7.857 1.00 0.50 O ATOM 587 CB GLU 39 51.982 17.805 6.878 1.00 0.50 C ATOM 588 CG GLU 39 53.081 16.884 7.391 1.00 0.50 C ATOM 589 CD GLU 39 54.473 17.318 6.970 1.00 0.50 C ATOM 590 OE1 GLU 39 54.604 18.304 6.213 1.00 0.50 O ATOM 591 OE2 GLU 39 55.448 16.654 7.397 1.00 0.50 O ATOM 598 N ILE 40 49.314 18.705 5.646 1.00 0.50 N ATOM 599 CA ILE 40 48.364 19.744 5.266 1.00 0.50 C ATOM 600 C ILE 40 46.984 19.470 5.849 1.00 0.50 C ATOM 601 O ILE 40 46.346 20.364 6.405 1.00 0.50 O ATOM 602 CB ILE 40 48.257 19.867 3.727 1.00 0.50 C ATOM 603 CG1 ILE 40 49.598 20.314 3.134 1.00 0.50 C ATOM 604 CG2 ILE 40 47.142 20.840 3.339 1.00 0.50 C ATOM 605 CD1 ILE 40 50.055 21.683 3.614 1.00 0.50 C ATOM 617 N ARG 41 46.528 18.229 5.719 1.00 0.50 N ATOM 618 CA ARG 41 45.214 17.840 6.217 1.00 0.50 C ATOM 619 C ARG 41 45.110 18.055 7.721 1.00 0.50 C ATOM 620 O ARG 41 44.140 18.635 8.208 1.00 0.50 O ATOM 621 CB ARG 41 44.928 16.373 5.882 1.00 0.50 C ATOM 622 CG ARG 41 43.558 15.897 6.345 1.00 0.50 C ATOM 623 CD ARG 41 43.293 14.461 5.919 1.00 0.50 C ATOM 624 NE ARG 41 41.987 13.994 6.378 1.00 0.50 N ATOM 625 CZ ARG 41 41.482 12.786 6.138 1.00 0.50 C ATOM 626 NH1 ARG 41 42.232 11.825 5.603 1.00 0.50 H ATOM 627 NH2 ARG 41 40.206 12.539 6.426 1.00 0.50 H ATOM 641 N LYS 42 46.113 17.582 8.453 1.00 0.50 N ATOM 642 CA LYS 42 46.113 17.679 9.908 1.00 0.50 C ATOM 643 C LYS 42 46.028 19.131 10.362 1.00 0.50 C ATOM 644 O LYS 42 45.111 19.512 11.090 1.00 0.50 O ATOM 645 CB LYS 42 47.370 17.027 10.487 1.00 0.50 C ATOM 646 CG LYS 42 47.448 17.082 12.005 1.00 0.50 C ATOM 647 CD LYS 42 48.699 16.387 12.524 1.00 0.50 C ATOM 648 CE LYS 42 48.792 16.455 14.044 1.00 0.50 C ATOM 649 NZ LYS 42 50.032 15.801 14.552 1.00 0.50 N ATOM 663 N GLU 43 46.992 19.938 9.931 1.00 0.50 N ATOM 664 CA GLU 43 47.029 21.350 10.293 1.00 0.50 C ATOM 665 C GLU 43 45.690 22.023 10.021 1.00 0.50 C ATOM 666 O GLU 43 45.002 22.456 10.945 1.00 0.50 O ATOM 667 CB GLU 43 48.140 22.070 9.521 1.00 0.50 C ATOM 668 CG GLU 43 49.544 21.712 9.989 1.00 0.50 C ATOM 669 CD GLU 43 50.636 22.333 9.138 1.00 0.50 C ATOM 670 OE1 GLU 43 50.636 23.568 8.947 1.00 0.50 O ATOM 671 OE2 GLU 43 51.503 21.569 8.646 1.00 0.50 O ATOM 678 N TRP 44 45.325 22.109 8.746 1.00 0.50 N ATOM 679 CA TRP 44 44.067 22.731 8.349 1.00 0.50 C ATOM 680 C TRP 44 42.920 22.268 9.240 1.00 0.50 C ATOM 681 O TRP 44 42.183 23.086 9.792 1.00 0.50 O ATOM 682 CB TRP 44 43.750 22.409 6.882 1.00 0.50 C ATOM 683 CG TRP 44 44.848 22.780 5.928 1.00 0.50 C ATOM 684 CD1 TRP 44 45.808 21.948 5.419 1.00 0.50 C ATOM 685 CD2 TRP 44 45.095 24.075 5.371 1.00 0.50 C ATOM 686 NE1 TRP 44 46.639 22.652 4.578 1.00 0.50 N ATOM 687 CE2 TRP 44 46.224 23.956 4.532 1.00 0.50 C ATOM 688 CE3 TRP 44 44.472 25.321 5.501 1.00 0.50 C ATOM 689 CZ2 TRP 44 46.744 25.043 3.822 1.00 0.50 C ATOM 690 CZ3 TRP 44 44.990 26.402 4.797 1.00 0.50 C ATOM 691 CH2 TRP 44 46.114 26.254 3.968 1.00 0.50 H ATOM 702 N MET 45 42.774 20.955 9.375 1.00 0.50 N ATOM 703 CA MET 45 41.717 20.383 10.199 1.00 0.50 C ATOM 704 C MET 45 41.785 20.908 11.627 1.00 0.50 C ATOM 705 O MET 45 40.757 21.120 12.270 1.00 0.50 O ATOM 706 CB MET 45 41.808 18.854 10.203 1.00 0.50 C ATOM 707 CG MET 45 40.717 18.183 11.026 1.00 0.50 C ATOM 708 SD MET 45 40.867 16.380 11.019 1.00 0.50 S ATOM 709 CE MET 45 42.288 16.161 12.082 1.00 0.50 C ATOM 719 N PHE 46 43.002 21.113 12.118 1.00 0.50 N ATOM 720 CA PHE 46 43.207 21.656 13.456 1.00 0.50 C ATOM 721 C PHE 46 42.794 23.120 13.526 1.00 0.50 C ATOM 722 O PHE 46 42.041 23.522 14.413 1.00 0.50 O ATOM 723 CB PHE 46 44.675 21.510 13.875 1.00 0.50 C ATOM 724 CG PHE 46 45.023 20.141 14.403 1.00 0.50 C ATOM 725 CD1 PHE 46 45.158 19.062 13.536 1.00 0.50 C ATOM 726 CD2 PHE 46 45.213 19.937 15.765 1.00 0.50 C ATOM 727 CE1 PHE 46 45.477 17.796 14.021 1.00 0.50 C ATOM 728 CE2 PHE 46 45.533 18.676 16.259 1.00 0.50 C ATOM 729 CZ PHE 46 45.663 17.604 15.384 1.00 0.50 C ATOM 739 N LYS 47 43.295 23.916 12.586 1.00 0.50 N ATOM 740 CA LYS 47 42.963 25.335 12.527 1.00 0.50 C ATOM 741 C LYS 47 41.457 25.546 12.471 1.00 0.50 C ATOM 742 O LYS 47 40.869 26.139 13.376 1.00 0.50 O ATOM 743 CB LYS 47 43.625 25.988 11.311 1.00 0.50 C ATOM 744 CG LYS 47 45.142 26.051 11.396 1.00 0.50 C ATOM 745 CD LYS 47 45.756 26.500 10.077 1.00 0.50 C ATOM 746 CE LYS 47 47.277 26.418 10.107 1.00 0.50 C ATOM 747 NZ LYS 47 47.875 26.764 8.785 1.00 0.50 N ATOM 761 N LEU 48 40.835 25.062 11.401 1.00 0.50 N ATOM 762 CA LEU 48 39.394 25.198 11.223 1.00 0.50 C ATOM 763 C LEU 48 38.652 24.933 12.527 1.00 0.50 C ATOM 764 O LEU 48 37.896 25.778 13.005 1.00 0.50 O ATOM 765 CB LEU 48 38.898 24.232 10.141 1.00 0.50 C ATOM 766 CG LEU 48 37.381 24.126 9.971 1.00 0.50 C ATOM 767 CD1 LEU 48 36.806 25.468 9.540 1.00 0.50 C ATOM 768 CD2 LEU 48 37.042 23.048 8.949 1.00 0.50 C ATOM 780 N VAL 49 38.871 23.752 13.097 1.00 0.50 N ATOM 781 CA VAL 49 38.223 23.373 14.347 1.00 0.50 C ATOM 782 C VAL 49 37.813 24.601 15.150 1.00 0.50 C ATOM 783 O VAL 49 37.562 24.514 16.352 1.00 0.50 O ATOM 784 CB VAL 49 39.144 22.481 15.209 1.00 0.50 C ATOM 785 CG1 VAL 49 38.579 22.322 16.617 1.00 0.50 C ATOM 786 CG2 VAL 49 39.323 21.115 14.556 1.00 0.50 C ATOM 796 N GLY 50 37.748 25.746 14.478 1.00 0.50 N ATOM 797 CA GLY 50 37.368 26.995 15.128 1.00 0.50 C ATOM 798 C GLY 50 37.926 28.197 14.378 1.00 0.50 C ATOM 799 O GLY 50 37.776 29.338 14.815 1.00 0.50 O ATOM 803 N LYS 51 38.573 27.936 13.247 1.00 0.50 N ATOM 804 CA LYS 51 39.155 28.997 12.434 1.00 0.50 C ATOM 805 C LYS 51 38.855 28.785 10.955 1.00 0.50 C ATOM 806 O LYS 51 37.792 28.281 10.594 1.00 0.50 O ATOM 807 CB LYS 51 40.669 29.067 12.651 1.00 0.50 C ATOM 808 CG LYS 51 41.070 29.325 14.096 1.00 0.50 C ATOM 809 CD LYS 51 42.574 29.536 14.227 1.00 0.50 C ATOM 810 CE LYS 51 42.979 29.824 15.667 1.00 0.50 C ATOM 811 NZ LYS 51 44.449 30.038 15.795 1.00 0.50 N ATOM 825 N GLU 52 39.799 29.174 10.104 1.00 0.50 N ATOM 826 CA GLU 52 39.637 29.028 8.662 1.00 0.50 C ATOM 827 C GLU 52 40.986 29.008 7.956 1.00 0.50 C ATOM 828 O GLU 52 42.033 28.943 8.599 1.00 0.50 O ATOM 829 CB GLU 52 38.774 30.164 8.103 1.00 0.50 C ATOM 830 CG GLU 52 37.551 30.481 8.954 1.00 0.50 C ATOM 831 CD GLU 52 36.715 31.621 8.401 1.00 0.50 C ATOM 832 OE1 GLU 52 36.984 32.795 8.733 1.00 0.50 O ATOM 833 OE2 GLU 52 35.767 31.333 7.630 1.00 0.50 O ATOM 840 N THR 53 40.955 29.064 6.629 1.00 0.50 N ATOM 841 CA THR 53 42.176 29.052 5.832 1.00 0.50 C ATOM 842 C THR 53 42.377 27.704 5.153 1.00 0.50 C ATOM 843 O THR 53 42.390 26.663 5.811 1.00 0.50 O ATOM 844 CB THR 53 43.412 29.373 6.703 1.00 0.50 C ATOM 845 OG1 THR 53 43.001 29.457 8.073 1.00 0.50 O ATOM 846 CG2 THR 53 44.048 30.693 6.289 1.00 0.50 C ATOM 854 N PHE 54 42.535 27.728 3.834 1.00 0.50 N ATOM 855 CA PHE 54 42.737 26.507 3.063 1.00 0.50 C ATOM 856 C PHE 54 43.313 26.813 1.687 1.00 0.50 C ATOM 857 O PHE 54 42.616 26.720 0.677 1.00 0.50 O ATOM 858 CB PHE 54 41.415 25.742 2.914 1.00 0.50 C ATOM 859 CG PHE 54 40.254 26.613 2.504 1.00 0.50 C ATOM 860 CD1 PHE 54 40.038 26.922 1.166 1.00 0.50 C ATOM 861 CD2 PHE 54 39.381 27.120 3.460 1.00 0.50 C ATOM 862 CE1 PHE 54 38.967 27.728 0.785 1.00 0.50 C ATOM 863 CE2 PHE 54 38.308 27.925 3.089 1.00 0.50 C ATOM 864 CZ PHE 54 38.102 28.229 1.749 1.00 0.50 C ATOM 874 N TYR 55 44.590 27.182 1.655 1.00 0.50 N ATOM 875 CA TYR 55 45.262 27.503 0.401 1.00 0.50 C ATOM 876 C TYR 55 45.729 26.240 -0.312 1.00 0.50 C ATOM 877 O TYR 55 46.615 25.535 0.170 1.00 0.50 O ATOM 878 CB TYR 55 46.462 28.427 0.659 1.00 0.50 C ATOM 879 CG TYR 55 46.070 29.820 1.097 1.00 0.50 C ATOM 880 CD1 TYR 55 45.956 30.140 2.449 1.00 0.50 C ATOM 881 CD2 TYR 55 45.814 30.816 0.157 1.00 0.50 C ATOM 882 CE1 TYR 55 45.594 31.420 2.855 1.00 0.50 C ATOM 883 CE2 TYR 55 45.453 32.099 0.553 1.00 0.50 C ATOM 884 CZ TYR 55 45.345 32.392 1.903 1.00 0.50 C ATOM 885 OH TYR 55 44.988 33.662 2.297 1.00 0.50 H ATOM 895 N VAL 56 45.126 25.960 -1.462 1.00 0.50 N ATOM 896 CA VAL 56 45.479 24.781 -2.245 1.00 0.50 C ATOM 897 C VAL 56 46.214 25.167 -3.522 1.00 0.50 C ATOM 898 O VAL 56 45.769 24.852 -4.625 1.00 0.50 O ATOM 899 CB VAL 56 44.226 23.952 -2.606 1.00 0.50 C ATOM 900 CG1 VAL 56 44.621 22.628 -3.251 1.00 0.50 C ATOM 901 CG2 VAL 56 43.379 23.701 -1.364 1.00 0.50 C ATOM 911 N GLY 57 47.340 25.855 -3.365 1.00 0.50 N ATOM 912 CA GLY 57 48.139 26.286 -4.506 1.00 0.50 C ATOM 913 C GLY 57 47.883 27.751 -4.837 1.00 0.50 C ATOM 914 O GLY 57 46.756 28.234 -4.728 1.00 0.50 O ATOM 918 N ALA 58 48.936 28.455 -5.238 1.00 0.50 N ATOM 919 CA ALA 58 48.827 29.866 -5.585 1.00 0.50 C ATOM 920 C ALA 58 47.381 30.341 -5.515 1.00 0.50 C ATOM 921 O ALA 58 47.023 31.149 -4.658 1.00 0.50 O ATOM 922 CB ALA 58 49.389 30.112 -6.982 1.00 0.50 C ATOM 928 N ALA 59 46.554 29.834 -6.422 1.00 0.50 N ATOM 929 CA ALA 59 45.144 30.205 -6.466 1.00 0.50 C ATOM 930 C ALA 59 44.634 30.595 -5.083 1.00 0.50 C ATOM 931 O ALA 59 45.342 30.450 -4.087 1.00 0.50 O ATOM 932 CB ALA 59 44.313 29.053 -7.024 1.00 0.50 C ATOM 938 N LYS 60 43.403 31.091 -5.031 1.00 0.50 N ATOM 939 CA LYS 60 42.796 31.503 -3.771 1.00 0.50 C ATOM 940 C LYS 60 41.329 31.097 -3.707 1.00 0.50 C ATOM 941 O LYS 60 40.477 31.711 -4.350 1.00 0.50 O ATOM 942 CB LYS 60 42.923 33.017 -3.586 1.00 0.50 C ATOM 943 CG LYS 60 42.408 33.517 -2.245 1.00 0.50 C ATOM 944 CD LYS 60 42.697 35.000 -2.056 1.00 0.50 C ATOM 945 CE LYS 60 42.298 35.480 -0.665 1.00 0.50 C ATOM 946 NZ LYS 60 42.656 36.911 -0.450 1.00 0.50 N ATOM 960 N THR 61 41.040 30.059 -2.930 1.00 0.50 N ATOM 961 CA THR 61 39.675 29.569 -2.782 1.00 0.50 C ATOM 962 C THR 61 39.230 29.611 -1.326 1.00 0.50 C ATOM 963 O THR 61 40.048 29.500 -0.413 1.00 0.50 O ATOM 964 CB THR 61 39.541 28.125 -3.315 1.00 0.50 C ATOM 965 OG1 THR 61 38.163 27.738 -3.257 1.00 0.50 O ATOM 966 CG2 THR 61 40.370 27.154 -2.484 1.00 0.50 C ATOM 974 N LYS 62 37.928 29.773 -1.114 1.00 0.50 N ATOM 975 CA LYS 62 37.371 29.830 0.231 1.00 0.50 C ATOM 976 C LYS 62 36.571 28.574 0.550 1.00 0.50 C ATOM 977 O LYS 62 35.496 28.352 -0.008 1.00 0.50 O ATOM 978 CB LYS 62 36.482 31.066 0.390 1.00 0.50 C ATOM 979 CG LYS 62 35.906 31.233 1.788 1.00 0.50 C ATOM 980 CD LYS 62 35.054 32.491 1.893 1.00 0.50 C ATOM 981 CE LYS 62 34.444 32.644 3.281 1.00 0.50 C ATOM 982 NZ LYS 62 33.576 33.854 3.373 1.00 0.50 N ATOM 996 N ALA 63 37.102 27.752 1.450 1.00 0.50 N ATOM 997 CA ALA 63 36.438 26.516 1.845 1.00 0.50 C ATOM 998 C ALA 63 35.296 26.789 2.815 1.00 0.50 C ATOM 999 O ALA 63 35.396 26.493 4.006 1.00 0.50 O ATOM 1000 CB ALA 63 37.442 25.558 2.479 1.00 0.50 C ATOM 1006 N THR 64 34.211 27.359 2.299 1.00 0.50 N ATOM 1007 CA THR 64 33.048 27.674 3.120 1.00 0.50 C ATOM 1008 C THR 64 32.574 26.452 3.897 1.00 0.50 C ATOM 1009 O THR 64 31.735 25.688 3.420 1.00 0.50 O ATOM 1010 CB THR 64 31.884 28.208 2.256 1.00 0.50 C ATOM 1011 OG1 THR 64 32.353 29.328 1.493 1.00 0.50 O ATOM 1012 CG2 THR 64 30.712 28.649 3.122 1.00 0.50 C ATOM 1020 N ILE 65 33.119 26.272 5.096 1.00 0.50 N ATOM 1021 CA ILE 65 32.754 25.142 5.941 1.00 0.50 C ATOM 1022 C ILE 65 31.850 25.580 7.086 1.00 0.50 C ATOM 1023 O ILE 65 32.301 26.225 8.033 1.00 0.50 O ATOM 1024 CB ILE 65 34.010 24.445 6.516 1.00 0.50 C ATOM 1025 CG1 ILE 65 35.000 24.122 5.391 1.00 0.50 C ATOM 1026 CG2 ILE 65 33.623 23.176 7.277 1.00 0.50 C ATOM 1027 CD1 ILE 65 36.224 23.346 5.855 1.00 0.50 C ATOM 1039 N ASN 66 30.573 25.228 6.993 1.00 0.50 N ATOM 1040 CA ASN 66 29.603 25.585 8.021 1.00 0.50 C ATOM 1041 C ASN 66 29.115 24.352 8.771 1.00 0.50 C ATOM 1042 O ASN 66 28.838 23.315 8.166 1.00 0.50 O ATOM 1043 CB ASN 66 28.417 26.332 7.401 1.00 0.50 C ATOM 1044 CG ASN 66 28.830 27.636 6.745 1.00 0.50 C ATOM 1045 OD1 ASN 66 29.258 28.576 7.421 1.00 0.50 O ATOM 1046 ND2 ASN 66 28.708 27.706 5.425 1.00 0.50 N ATOM 1053 N ILE 67 29.014 24.469 10.091 1.00 0.50 N ATOM 1054 CA ILE 67 28.560 23.362 10.925 1.00 0.50 C ATOM 1055 C ILE 67 27.754 23.866 12.116 1.00 0.50 C ATOM 1056 O ILE 67 28.313 24.184 13.166 1.00 0.50 O ATOM 1057 CB ILE 67 29.753 22.518 11.431 1.00 0.50 C ATOM 1058 CG1 ILE 67 29.249 21.251 12.131 1.00 0.50 C ATOM 1059 CG2 ILE 67 30.636 23.341 12.370 1.00 0.50 C ATOM 1060 CD1 ILE 67 30.337 20.220 12.391 1.00 0.50 C ATOM 1072 N ASP 68 26.438 23.938 11.945 1.00 0.50 N ATOM 1073 CA ASP 68 25.553 24.403 13.006 1.00 0.50 C ATOM 1074 C ASP 68 25.514 23.415 14.164 1.00 0.50 C ATOM 1075 O ASP 68 24.812 22.404 14.108 1.00 0.50 O ATOM 1076 CB ASP 68 24.138 24.628 12.461 1.00 0.50 C ATOM 1077 CG ASP 68 24.057 25.777 11.473 1.00 0.50 C ATOM 1078 OD1 ASP 68 24.031 26.950 11.899 1.00 0.50 O ATOM 1079 OD2 ASP 68 24.012 25.498 10.253 1.00 0.50 O ATOM 1084 N ALA 69 26.270 23.711 15.214 1.00 0.50 N ATOM 1085 CA ALA 69 26.325 22.849 16.389 1.00 0.50 C ATOM 1086 C ALA 69 24.930 22.403 16.809 1.00 0.50 C ATOM 1087 O ALA 69 24.323 21.544 16.169 1.00 0.50 O ATOM 1088 CB ALA 69 27.012 23.573 17.543 1.00 0.50 C ATOM 1094 N ILE 70 24.426 22.991 17.889 1.00 0.50 N ATOM 1095 CA ILE 70 23.102 22.655 18.398 1.00 0.50 C ATOM 1096 C ILE 70 23.023 21.190 18.804 1.00 0.50 C ATOM 1097 O ILE 70 22.522 20.860 19.880 1.00 0.50 O ATOM 1098 CB ILE 70 22.008 22.956 17.347 1.00 0.50 C ATOM 1099 CG1 ILE 70 21.997 24.450 17.003 1.00 0.50 C ATOM 1100 CG2 ILE 70 20.635 22.507 17.852 1.00 0.50 C ATOM 1101 CD1 ILE 70 21.108 24.801 15.819 1.00 0.50 C ATOM 1113 N SER 71 23.520 20.312 17.939 1.00 0.50 N ATOM 1114 CA SER 71 23.507 18.879 18.207 1.00 0.50 C ATOM 1115 C SER 71 23.833 18.082 16.951 1.00 0.50 C ATOM 1116 O SER 71 23.235 17.036 16.696 1.00 0.50 O ATOM 1117 CB SER 71 22.142 18.452 18.754 1.00 0.50 C ATOM 1118 OG SER 71 21.136 18.630 17.771 1.00 0.50 O ATOM 1124 N GLY 72 24.784 18.581 16.168 1.00 0.50 N ATOM 1125 CA GLY 72 25.191 17.916 14.937 1.00 0.50 C ATOM 1126 C GLY 72 24.039 17.841 13.943 1.00 0.50 C ATOM 1127 O GLY 72 24.149 17.202 12.897 1.00 0.50 O ATOM 1131 N PHE 73 22.933 18.498 14.277 1.00 0.50 N ATOM 1132 CA PHE 73 21.758 18.509 13.415 1.00 0.50 C ATOM 1133 C PHE 73 22.062 19.171 12.077 1.00 0.50 C ATOM 1134 O PHE 73 21.210 19.221 11.190 1.00 0.50 O ATOM 1135 CB PHE 73 20.594 19.237 14.101 1.00 0.50 C ATOM 1136 CG PHE 73 19.261 19.011 13.434 1.00 0.50 C ATOM 1137 CD1 PHE 73 18.622 17.780 13.523 1.00 0.50 C ATOM 1138 CD2 PHE 73 18.651 20.035 12.716 1.00 0.50 C ATOM 1139 CE1 PHE 73 17.391 17.569 12.907 1.00 0.50 C ATOM 1140 CE2 PHE 73 17.420 19.833 12.096 1.00 0.50 C ATOM 1141 CZ PHE 73 16.791 18.598 12.193 1.00 0.50 C ATOM 1151 N ALA 74 23.281 19.681 11.939 1.00 0.50 N ATOM 1152 CA ALA 74 23.699 20.343 10.709 1.00 0.50 C ATOM 1153 C ALA 74 25.164 20.058 10.400 1.00 0.50 C ATOM 1154 O ALA 74 25.857 19.409 11.183 1.00 0.50 O ATOM 1155 CB ALA 74 23.471 21.848 10.816 1.00 0.50 C ATOM 1161 N TYR 75 25.628 20.545 9.255 1.00 0.50 N ATOM 1162 CA TYR 75 27.011 20.343 8.841 1.00 0.50 C ATOM 1163 C TYR 75 27.192 20.644 7.359 1.00 0.50 C ATOM 1164 O TYR 75 27.722 19.823 6.610 1.00 0.50 O ATOM 1165 CB TYR 75 27.452 18.903 9.134 1.00 0.50 C ATOM 1166 CG TYR 75 27.558 18.589 10.610 1.00 0.50 C ATOM 1167 CD1 TYR 75 28.073 19.525 11.505 1.00 0.50 C ATOM 1168 CD2 TYR 75 27.142 17.357 11.107 1.00 0.50 C ATOM 1169 CE1 TYR 75 28.174 19.239 12.863 1.00 0.50 C ATOM 1170 CE2 TYR 75 27.239 17.060 12.463 1.00 0.50 C ATOM 1171 CZ TYR 75 27.756 18.007 13.333 1.00 0.50 C ATOM 1172 OH TYR 75 27.851 17.716 14.675 1.00 0.50 H ATOM 1182 N GLU 76 26.746 21.824 6.940 1.00 0.50 N ATOM 1183 CA GLU 76 26.857 22.234 5.545 1.00 0.50 C ATOM 1184 C GLU 76 28.315 22.378 5.128 1.00 0.50 C ATOM 1185 O GLU 76 29.084 23.101 5.762 1.00 0.50 O ATOM 1186 CB GLU 76 26.118 23.556 5.316 1.00 0.50 C ATOM 1187 CG GLU 76 26.113 24.012 3.863 1.00 0.50 C ATOM 1188 CD GLU 76 25.468 25.371 3.663 1.00 0.50 C ATOM 1189 OE1 GLU 76 25.966 26.374 4.220 1.00 0.50 O ATOM 1190 OE2 GLU 76 24.441 25.434 2.944 1.00 0.50 O ATOM 1197 N TYR 77 28.691 21.683 4.060 1.00 0.50 N ATOM 1198 CA TYR 77 30.058 21.732 3.556 1.00 0.50 C ATOM 1199 C TYR 77 30.105 22.303 2.145 1.00 0.50 C ATOM 1200 O TYR 77 29.647 21.670 1.193 1.00 0.50 O ATOM 1201 CB TYR 77 30.683 20.330 3.569 1.00 0.50 C ATOM 1202 CG TYR 77 31.280 19.944 4.905 1.00 0.50 C ATOM 1203 CD1 TYR 77 32.473 20.512 5.347 1.00 0.50 C ATOM 1204 CD2 TYR 77 30.648 19.010 5.722 1.00 0.50 C ATOM 1205 CE1 TYR 77 33.026 20.158 6.573 1.00 0.50 C ATOM 1206 CE2 TYR 77 31.192 18.647 6.950 1.00 0.50 C ATOM 1207 CZ TYR 77 32.380 19.226 7.367 1.00 0.50 C ATOM 1208 OH TYR 77 32.919 18.870 8.583 1.00 0.50 H ATOM 1218 N THR 78 30.660 23.503 2.016 1.00 0.50 N ATOM 1219 CA THR 78 30.768 24.162 0.718 1.00 0.50 C ATOM 1220 C THR 78 32.219 24.470 0.377 1.00 0.50 C ATOM 1221 O THR 78 33.009 24.834 1.248 1.00 0.50 O ATOM 1222 CB THR 78 29.949 25.471 0.689 1.00 0.50 C ATOM 1223 OG1 THR 78 29.316 25.649 1.963 1.00 0.50 O ATOM 1224 CG2 THR 78 28.884 25.430 -0.400 1.00 0.50 C ATOM 1232 N LEU 79 32.566 24.323 -0.897 1.00 0.50 N ATOM 1233 CA LEU 79 33.922 24.595 -1.359 1.00 0.50 C ATOM 1234 C LEU 79 33.913 25.424 -2.637 1.00 0.50 C ATOM 1235 O LEU 79 33.243 25.076 -3.609 1.00 0.50 O ATOM 1236 CB LEU 79 34.674 23.282 -1.600 1.00 0.50 C ATOM 1237 CG LEU 79 36.021 23.395 -2.321 1.00 0.50 C ATOM 1238 CD1 LEU 79 36.952 24.323 -1.551 1.00 0.50 C ATOM 1239 CD2 LEU 79 36.650 22.017 -2.476 1.00 0.50 C ATOM 1251 N GLU 80 34.660 26.523 -2.629 1.00 0.50 N ATOM 1252 CA GLU 80 34.713 27.422 -3.776 1.00 0.50 C ATOM 1253 C GLU 80 36.134 27.554 -4.308 1.00 0.50 C ATOM 1254 O GLU 80 36.955 28.273 -3.740 1.00 0.50 O ATOM 1255 CB GLU 80 34.170 28.805 -3.397 1.00 0.50 C ATOM 1256 CG GLU 80 34.105 29.780 -4.565 1.00 0.50 C ATOM 1257 CD GLU 80 33.692 31.180 -4.155 1.00 0.50 C ATOM 1258 OE1 GLU 80 32.540 31.373 -3.707 1.00 0.50 O ATOM 1259 OE2 GLU 80 34.530 32.104 -4.293 1.00 0.50 O ATOM 1266 N ILE 81 36.417 26.854 -5.402 1.00 0.50 N ATOM 1267 CA ILE 81 37.741 26.891 -6.013 1.00 0.50 C ATOM 1268 C ILE 81 37.706 27.603 -7.359 1.00 0.50 C ATOM 1269 O ILE 81 36.702 27.558 -8.070 1.00 0.50 O ATOM 1270 CB ILE 81 38.309 25.465 -6.200 1.00 0.50 C ATOM 1271 CG1 ILE 81 38.459 24.769 -4.842 1.00 0.50 C ATOM 1272 CG2 ILE 81 39.651 25.510 -6.934 1.00 0.50 C ATOM 1273 CD1 ILE 81 38.770 23.285 -4.944 1.00 0.50 C ATOM 1285 N ASN 82 38.808 28.261 -7.703 1.00 0.50 N ATOM 1286 CA ASN 82 38.906 28.981 -8.967 1.00 0.50 C ATOM 1287 C ASN 82 37.562 29.574 -9.369 1.00 0.50 C ATOM 1288 O ASN 82 37.288 29.766 -10.555 1.00 0.50 O ATOM 1289 CB ASN 82 39.429 28.054 -10.071 1.00 0.50 C ATOM 1290 CG ASN 82 40.881 27.668 -9.864 1.00 0.50 C ATOM 1291 OD1 ASN 82 41.641 28.387 -9.208 1.00 0.50 O ATOM 1292 ND2 ASN 82 41.282 26.533 -10.423 1.00 0.50 N ATOM 1299 N GLY 83 36.727 29.861 -8.378 1.00 0.50 N ATOM 1300 CA GLY 83 35.405 30.425 -8.628 1.00 0.50 C ATOM 1301 C GLY 83 34.453 29.371 -9.177 1.00 0.50 C ATOM 1302 O GLY 83 33.863 29.549 -10.243 1.00 0.50 O ATOM 1306 N LYS 84 34.307 28.272 -8.445 1.00 0.50 N ATOM 1307 CA LYS 84 33.421 27.190 -8.855 1.00 0.50 C ATOM 1308 C LYS 84 33.229 26.179 -7.731 1.00 0.50 C ATOM 1309 O LYS 84 34.112 25.368 -7.454 1.00 0.50 O ATOM 1310 CB LYS 84 33.975 26.485 -10.096 1.00 0.50 C ATOM 1311 CG LYS 84 33.043 25.430 -10.671 1.00 0.50 C ATOM 1312 CD LYS 84 33.647 24.764 -11.900 1.00 0.50 C ATOM 1313 CE LYS 84 32.631 23.891 -12.626 1.00 0.50 C ATOM 1314 NZ LYS 84 33.178 23.351 -13.903 1.00 0.50 N ATOM 1328 N SER 85 32.069 26.234 -7.085 1.00 0.50 N ATOM 1329 CA SER 85 31.758 25.324 -5.989 1.00 0.50 C ATOM 1330 C SER 85 31.530 23.906 -6.499 1.00 0.50 C ATOM 1331 O SER 85 30.626 23.662 -7.297 1.00 0.50 O ATOM 1332 CB SER 85 30.519 25.808 -5.230 1.00 0.50 C ATOM 1333 OG SER 85 30.152 24.871 -4.230 1.00 0.50 O ATOM 1339 N LEU 86 32.356 22.976 -6.034 1.00 0.50 N ATOM 1340 CA LEU 86 32.241 21.579 -6.435 1.00 0.50 C ATOM 1341 C LEU 86 31.960 20.684 -5.234 1.00 0.50 C ATOM 1342 O LEU 86 32.341 19.513 -5.220 1.00 0.50 O ATOM 1343 CB LEU 86 33.526 21.119 -7.133 1.00 0.50 C ATOM 1344 CG LEU 86 33.852 21.798 -8.466 1.00 0.50 C ATOM 1345 CD1 LEU 86 35.207 21.327 -8.977 1.00 0.50 C ATOM 1346 CD2 LEU 86 32.763 21.495 -9.488 1.00 0.50 C ATOM 1358 N LYS 87 31.296 21.242 -4.229 1.00 0.50 N ATOM 1359 CA LYS 87 30.959 20.492 -3.024 1.00 0.50 C ATOM 1360 C LYS 87 29.999 19.351 -3.336 1.00 0.50 C ATOM 1361 O LYS 87 30.147 18.245 -2.817 1.00 0.50 O ATOM 1362 CB LYS 87 30.340 21.418 -1.974 1.00 0.50 C ATOM 1363 CG LYS 87 29.995 20.721 -0.667 1.00 0.50 C ATOM 1364 CD LYS 87 29.483 21.709 0.373 1.00 0.50 C ATOM 1365 CE LYS 87 28.089 22.220 0.026 1.00 0.50 C ATOM 1366 NZ LYS 87 27.585 23.186 1.044 1.00 0.50 N ATOM 1380 N LYS 88 29.016 19.627 -4.185 1.00 0.50 N ATOM 1381 CA LYS 88 28.038 18.619 -4.579 1.00 0.50 C ATOM 1382 C LYS 88 28.613 17.671 -5.623 1.00 0.50 C ATOM 1383 O LYS 88 28.973 18.090 -6.724 1.00 0.50 O ATOM 1384 CB LYS 88 26.772 19.286 -5.125 1.00 0.50 C ATOM 1385 CG LYS 88 25.666 18.305 -5.478 1.00 0.50 C ATOM 1386 CD LYS 88 24.409 19.029 -5.945 1.00 0.50 C ATOM 1387 CE LYS 88 23.287 18.052 -6.278 1.00 0.50 C ATOM 1388 NZ LYS 88 22.055 18.760 -6.729 1.00 0.50 N ATOM 1402 N TYR 89 28.700 16.393 -5.271 1.00 0.50 N ATOM 1403 CA TYR 89 29.233 15.383 -6.179 1.00 0.50 C ATOM 1404 C TYR 89 29.344 14.029 -5.491 1.00 0.50 C ATOM 1405 O TYR 89 30.433 13.466 -5.380 1.00 0.50 O ATOM 1406 CB TYR 89 30.609 15.811 -6.707 1.00 0.50 C ATOM 1407 CG TYR 89 31.226 14.816 -7.666 1.00 0.50 C ATOM 1408 CD1 TYR 89 30.798 14.739 -8.989 1.00 0.50 C ATOM 1409 CD2 TYR 89 32.237 13.955 -7.244 1.00 0.50 C ATOM 1410 CE1 TYR 89 31.362 13.824 -9.874 1.00 0.50 C ATOM 1411 CE2 TYR 89 32.808 13.037 -8.120 1.00 0.50 C ATOM 1412 CZ TYR 89 32.364 12.978 -9.431 1.00 0.50 C ATOM 1413 OH TYR 89 32.928 12.071 -10.300 1.00 0.50 H ATOM 1423 N MET 90 28.211 13.511 -5.028 1.00 0.50 N ATOM 1424 CA MET 90 28.180 12.221 -4.349 1.00 0.50 C ATOM 1425 C MET 90 28.462 11.081 -5.320 1.00 0.50 C ATOM 1426 O MET 90 29.156 10.122 -4.981 1.00 0.50 O ATOM 1427 CB MET 90 26.823 12.004 -3.673 1.00 0.50 C ATOM 1428 CG MET 90 26.576 12.935 -2.495 1.00 0.50 C ATOM 1429 SD MET 90 27.790 12.706 -1.174 1.00 0.50 S ATOM 1430 CE MET 90 27.322 11.090 -0.570 1.00 0.50 C ATOM 1440 OXT MET 90 27.997 11.102 -6.463 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.19 43.3 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 65.82 49.2 118 100.0 118 ARMSMC SURFACE . . . . . . . . 76.09 41.7 108 100.0 108 ARMSMC BURIED . . . . . . . . 65.71 45.7 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.72 48.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 77.66 50.0 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 76.41 50.0 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 86.58 40.9 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 71.56 58.1 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.67 60.0 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 58.97 65.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 65.34 61.5 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 67.60 63.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 67.79 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.15 41.7 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 61.15 41.7 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 61.25 41.2 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 65.75 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 44.62 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.56 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 73.56 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 83.80 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.90 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 7.71 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.52 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.52 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0614 CRMSCA SECONDARY STRUCTURE . . 3.80 59 100.0 59 CRMSCA SURFACE . . . . . . . . 6.34 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.91 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.57 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.95 293 100.0 293 CRMSMC SURFACE . . . . . . . . 6.38 269 100.0 269 CRMSMC BURIED . . . . . . . . 4.00 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.76 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 7.94 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.28 252 100.0 252 CRMSSC SURFACE . . . . . . . . 9.18 204 100.0 204 CRMSSC BURIED . . . . . . . . 5.29 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.68 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.64 488 100.0 488 CRMSALL SURFACE . . . . . . . . 7.76 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.68 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.122 0.728 0.372 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.871 0.678 0.351 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.934 0.768 0.384 55 100.0 55 ERRCA BURIED . . . . . . . . 2.845 0.664 0.352 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.179 0.734 0.371 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.978 0.682 0.348 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.974 0.774 0.387 269 100.0 269 ERRMC BURIED . . . . . . . . 2.942 0.670 0.347 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.793 0.774 0.388 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.925 0.777 0.389 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.021 0.728 0.366 252 100.0 252 ERRSC SURFACE . . . . . . . . 7.186 0.820 0.410 204 100.0 204 ERRSC BURIED . . . . . . . . 3.924 0.712 0.358 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.919 0.752 0.379 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.476 0.703 0.356 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.953 0.793 0.397 424 100.0 424 ERRALL BURIED . . . . . . . . 3.419 0.691 0.352 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 6 16 26 59 84 90 90 DISTCA CA (P) 6.67 17.78 28.89 65.56 93.33 90 DISTCA CA (RMS) 0.53 1.40 1.82 3.15 4.63 DISTCA ALL (N) 26 112 197 420 634 716 716 DISTALL ALL (P) 3.63 15.64 27.51 58.66 88.55 716 DISTALL ALL (RMS) 0.53 1.47 1.95 3.19 4.92 DISTALL END of the results output