####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS436_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS436_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 59 - 75 4.91 17.76 LCS_AVERAGE: 15.84 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 61 - 70 1.82 17.76 LCS_AVERAGE: 7.07 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 64 - 70 0.43 17.96 LCS_AVERAGE: 4.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 11 3 4 4 5 5 5 15 15 17 17 17 19 20 22 23 24 25 26 29 30 LCS_GDT T 2 T 2 4 7 11 3 4 5 6 7 10 15 15 17 17 17 19 20 22 23 24 25 26 29 30 LCS_GDT D 3 D 3 4 7 11 3 4 5 6 7 10 15 15 17 17 17 19 20 22 23 24 25 26 29 31 LCS_GDT L 4 L 4 4 7 11 3 4 4 6 8 9 15 15 17 17 17 19 20 22 23 24 25 27 30 32 LCS_GDT V 5 V 5 3 7 11 3 3 4 5 7 7 8 8 9 13 14 19 20 22 23 24 25 26 29 30 LCS_GDT A 6 A 6 3 7 13 3 3 4 5 8 10 15 15 17 17 17 19 20 22 23 24 25 27 30 32 LCS_GDT V 7 V 7 4 7 13 3 4 5 6 8 10 15 15 17 17 17 19 20 22 23 24 25 27 30 32 LCS_GDT W 8 W 8 5 7 13 3 4 5 6 7 9 15 15 17 17 17 19 20 22 23 26 27 28 30 32 LCS_GDT D 9 D 9 5 7 13 3 4 8 8 8 11 12 13 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT V 10 V 10 5 7 13 3 4 5 6 6 7 9 10 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT A 11 A 11 5 7 13 3 4 5 6 6 7 7 7 9 10 11 13 19 20 24 26 27 30 33 35 LCS_GDT L 12 L 12 5 7 13 4 4 5 6 6 7 7 7 9 10 10 13 14 16 18 21 23 26 29 33 LCS_GDT S 13 S 13 4 7 13 4 4 4 4 5 7 7 7 9 10 10 11 12 15 17 18 20 22 26 29 LCS_GDT D 14 D 14 4 4 13 4 4 4 4 5 7 7 7 8 10 10 11 12 15 17 18 23 26 27 29 LCS_GDT G 15 G 15 4 4 13 4 4 4 4 5 7 7 7 9 10 10 11 13 15 18 21 23 26 27 29 LCS_GDT V 16 V 16 3 4 13 0 3 3 3 4 6 6 7 9 10 10 11 13 15 18 21 23 26 27 29 LCS_GDT H 17 H 17 3 4 13 0 3 3 3 4 4 5 7 8 10 10 13 15 18 19 21 23 26 28 33 LCS_GDT K 18 K 18 3 3 13 1 3 4 5 6 8 10 11 13 14 15 16 19 20 24 26 27 30 33 35 LCS_GDT I 19 I 19 3 4 11 1 3 4 4 6 8 10 11 14 14 15 16 19 21 24 26 27 30 33 35 LCS_GDT E 20 E 20 3 4 11 0 3 4 4 5 8 10 11 14 14 15 17 20 21 24 26 27 30 33 35 LCS_GDT F 21 F 21 3 5 11 1 2 3 4 5 5 5 8 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT E 22 E 22 4 5 11 1 4 4 4 5 6 6 6 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT H 23 H 23 4 5 12 3 4 4 4 5 6 6 10 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT G 24 G 24 4 5 15 3 4 4 4 5 9 12 13 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT T 25 T 25 4 5 15 3 4 4 5 8 11 12 13 14 14 17 18 20 22 24 26 27 30 33 35 LCS_GDT T 26 T 26 3 7 15 3 3 4 6 8 9 10 11 14 14 16 18 19 22 23 26 27 29 33 35 LCS_GDT S 27 S 27 3 7 15 3 4 4 6 6 7 8 11 13 14 15 17 18 22 23 26 26 28 30 32 LCS_GDT G 28 G 28 5 7 15 3 5 5 6 6 7 10 11 13 14 17 18 19 22 23 24 26 28 30 32 LCS_GDT K 29 K 29 5 7 15 4 5 5 5 6 7 8 9 11 13 17 18 19 21 23 24 26 28 30 32 LCS_GDT R 30 R 30 5 7 15 4 5 5 6 6 7 8 9 11 12 14 17 19 21 23 24 26 28 30 32 LCS_GDT V 31 V 31 5 7 15 4 5 5 6 6 7 8 9 11 12 14 15 17 19 20 21 26 28 28 31 LCS_GDT V 32 V 32 5 7 15 4 5 5 6 6 7 8 9 11 12 14 15 17 19 20 21 26 28 28 31 LCS_GDT Y 33 Y 33 3 6 15 3 3 3 4 6 6 8 9 10 12 14 15 17 19 20 21 26 28 28 31 LCS_GDT V 34 V 34 5 6 15 3 3 4 5 7 9 10 11 11 12 14 15 17 19 20 21 26 28 28 31 LCS_GDT D 35 D 35 5 6 15 4 4 4 6 7 9 10 11 11 12 14 15 16 18 20 21 26 28 28 31 LCS_GDT G 36 G 36 5 6 15 4 4 4 6 7 9 10 11 11 12 13 14 15 16 18 19 21 23 26 31 LCS_GDT K 37 K 37 5 7 15 4 4 5 6 7 9 10 11 11 12 13 14 15 16 18 19 21 23 26 31 LCS_GDT E 38 E 38 5 7 15 4 4 5 6 7 9 10 11 11 12 13 14 15 16 18 19 22 23 26 31 LCS_GDT E 39 E 39 4 7 14 4 4 5 5 7 7 9 11 11 12 13 14 15 16 18 19 22 23 26 31 LCS_GDT I 40 I 40 4 7 15 4 5 5 5 7 7 9 11 11 12 13 14 17 19 22 23 25 27 30 32 LCS_GDT R 41 R 41 4 7 16 3 5 5 5 7 9 10 11 11 12 15 16 17 19 23 23 25 27 30 33 LCS_GDT K 42 K 42 4 7 16 3 5 5 6 8 9 11 12 14 14 15 19 20 22 23 24 25 27 30 33 LCS_GDT E 43 E 43 4 8 16 3 5 5 6 7 10 15 15 17 17 17 19 20 22 23 24 25 26 29 31 LCS_GDT W 44 W 44 4 8 16 3 4 5 6 7 10 15 15 17 17 17 19 20 20 20 24 25 26 29 30 LCS_GDT M 45 M 45 4 8 16 3 4 5 6 7 10 15 15 17 17 17 19 20 20 20 24 27 27 30 32 LCS_GDT F 46 F 46 4 8 16 3 4 5 6 7 10 15 15 17 17 17 19 20 20 21 24 27 27 30 33 LCS_GDT K 47 K 47 4 8 16 3 4 5 6 7 9 15 15 17 17 17 19 21 21 22 24 27 29 30 33 LCS_GDT L 48 L 48 4 8 16 3 3 4 6 6 9 13 13 17 17 17 19 21 21 22 24 27 29 30 33 LCS_GDT V 49 V 49 4 8 16 3 3 4 5 7 10 15 15 17 17 17 19 21 22 23 24 27 29 30 33 LCS_GDT G 50 G 50 3 8 16 0 3 4 6 8 9 15 15 17 17 17 19 21 22 23 24 27 29 30 33 LCS_GDT K 51 K 51 4 5 16 3 5 5 6 8 10 15 15 17 17 17 19 20 22 23 24 27 29 30 33 LCS_GDT E 52 E 52 4 5 16 3 4 4 6 8 9 11 12 17 17 17 19 21 22 23 24 27 29 30 33 LCS_GDT T 53 T 53 4 5 16 3 4 4 5 6 8 11 12 14 14 17 18 21 22 23 24 27 29 30 33 LCS_GDT F 54 F 54 4 5 16 3 4 4 5 6 6 8 12 14 14 17 18 21 22 23 24 27 29 33 35 LCS_GDT Y 55 Y 55 3 5 16 1 3 3 5 6 6 7 9 11 14 17 18 21 22 23 26 27 30 33 35 LCS_GDT V 56 V 56 3 4 16 1 4 4 4 6 6 7 8 9 13 17 18 19 22 23 26 27 30 33 35 LCS_GDT G 57 G 57 3 4 12 3 4 5 6 6 6 6 7 7 9 11 17 17 21 22 23 25 29 33 35 LCS_GDT A 58 A 58 4 4 13 3 4 4 4 4 5 6 6 7 9 10 14 17 19 22 23 27 30 33 35 LCS_GDT A 59 A 59 4 4 17 3 4 4 4 4 6 6 8 9 9 13 17 19 21 24 25 27 30 33 35 LCS_GDT K 60 K 60 4 4 17 3 4 4 4 4 5 9 11 12 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT T 61 T 61 4 10 17 1 4 4 4 6 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT K 62 K 62 4 10 17 3 4 4 7 9 11 12 13 14 14 17 18 20 21 24 26 27 30 33 35 LCS_GDT A 63 A 63 4 10 17 3 4 4 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT T 64 T 64 7 10 17 4 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT I 65 I 65 7 10 17 6 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT N 66 N 66 7 10 17 6 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT I 67 I 67 7 10 17 6 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT D 68 D 68 7 10 17 6 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT A 69 A 69 7 10 17 6 7 8 8 9 11 12 13 14 14 17 18 21 21 24 26 27 30 33 35 LCS_GDT I 70 I 70 7 10 17 6 7 8 8 9 9 12 13 14 14 17 18 21 21 23 26 27 30 33 35 LCS_GDT S 71 S 71 4 9 17 4 4 5 5 7 8 10 11 13 14 15 16 17 21 23 26 27 28 30 32 LCS_GDT G 72 G 72 4 7 17 4 4 5 5 6 8 8 10 13 14 17 18 21 21 23 24 27 29 30 33 LCS_GDT F 73 F 73 5 7 17 4 4 5 6 6 8 10 11 13 14 17 18 21 21 23 26 27 29 31 33 LCS_GDT A 74 A 74 5 7 17 3 4 5 5 6 8 8 10 11 14 17 18 21 21 23 26 27 30 33 35 LCS_GDT Y 75 Y 75 5 7 17 3 4 5 5 6 8 8 10 11 13 17 18 20 21 24 26 27 30 33 35 LCS_GDT E 76 E 76 5 7 14 3 4 5 5 5 8 8 10 11 11 13 13 15 20 24 26 27 30 33 35 LCS_GDT Y 77 Y 77 5 7 14 3 4 5 5 6 8 8 10 11 11 13 13 15 18 19 22 27 30 33 35 LCS_GDT T 78 T 78 3 5 14 3 3 3 4 5 6 7 10 11 11 11 13 14 18 21 24 27 29 33 35 LCS_GDT L 79 L 79 4 5 14 3 4 4 6 6 6 7 9 9 10 10 13 14 17 19 21 24 29 33 35 LCS_GDT E 80 E 80 4 5 13 3 4 5 6 6 6 7 9 9 10 11 13 15 17 17 18 23 24 26 31 LCS_GDT I 81 I 81 4 5 11 3 4 5 6 6 6 7 9 9 10 11 12 15 17 17 18 21 22 26 31 LCS_GDT N 82 N 82 4 5 11 3 4 5 6 6 6 6 9 9 10 11 12 12 17 17 17 21 22 26 31 LCS_GDT G 83 G 83 4 5 11 3 4 4 5 6 6 6 9 9 10 10 11 12 12 15 17 21 22 26 31 LCS_GDT K 84 K 84 4 4 11 3 4 4 4 4 5 6 8 9 9 13 13 15 17 17 18 21 22 26 31 LCS_GDT S 85 S 85 4 4 11 2 4 4 4 4 5 6 8 9 9 13 13 15 17 17 18 21 22 26 31 LCS_GDT L 86 L 86 3 3 11 2 3 3 3 3 5 6 8 9 11 14 15 16 17 19 21 23 28 28 30 LCS_GDT K 87 K 87 3 4 11 3 3 4 4 4 5 6 8 9 9 11 15 17 18 19 21 26 28 28 28 LCS_GDT K 88 K 88 3 4 11 3 3 4 4 5 5 6 8 9 9 10 12 15 17 19 20 26 28 28 28 LCS_GDT Y 89 Y 89 3 4 11 3 3 4 4 5 5 5 8 9 9 10 12 15 17 17 19 21 23 26 27 LCS_GDT M 90 M 90 3 4 11 3 3 4 4 4 4 5 8 9 9 10 12 15 17 17 21 21 23 26 28 LCS_AVERAGE LCS_A: 9.20 ( 4.69 7.07 15.84 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 7 8 8 9 11 15 15 17 17 17 19 21 22 24 26 27 30 33 35 GDT PERCENT_AT 6.67 7.78 8.89 8.89 10.00 12.22 16.67 16.67 18.89 18.89 18.89 21.11 23.33 24.44 26.67 28.89 30.00 33.33 36.67 38.89 GDT RMS_LOCAL 0.32 0.43 1.07 1.07 1.48 2.27 2.78 2.78 3.00 3.00 3.00 3.46 4.86 4.57 5.80 5.75 5.83 6.67 6.97 7.22 GDT RMS_ALL_AT 17.91 17.96 17.36 17.36 17.93 17.73 20.59 20.59 20.46 20.46 20.46 20.60 20.46 20.44 16.46 17.04 16.86 15.92 15.89 15.73 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: D 9 D 9 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: D 35 D 35 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 3.083 0 0.457 1.129 4.952 56.905 52.024 LGA T 2 T 2 1.970 0 0.467 0.418 3.960 70.952 60.068 LGA D 3 D 3 2.968 0 0.138 1.005 4.940 49.167 47.440 LGA L 4 L 4 3.224 0 0.087 0.160 6.338 50.119 40.774 LGA V 5 V 5 5.988 0 0.366 1.386 10.486 27.619 16.395 LGA A 6 A 6 2.892 0 0.120 0.145 3.738 55.357 52.952 LGA V 7 V 7 2.232 0 0.676 0.911 4.795 54.524 56.871 LGA W 8 W 8 3.309 0 0.078 1.231 6.714 37.381 52.993 LGA D 9 D 9 9.229 0 0.289 1.393 13.824 3.690 1.845 LGA V 10 V 10 12.617 0 0.036 1.354 16.022 0.000 0.000 LGA A 11 A 11 19.703 0 0.100 0.140 21.477 0.000 0.000 LGA L 12 L 12 23.256 0 0.566 1.536 26.200 0.000 0.000 LGA S 13 S 13 28.206 0 0.026 0.689 30.119 0.000 0.000 LGA D 14 D 14 26.230 0 0.341 1.442 26.770 0.000 0.000 LGA G 15 G 15 25.022 0 0.464 0.464 25.022 0.000 0.000 LGA V 16 V 16 25.495 0 0.569 0.711 28.311 0.000 0.000 LGA H 17 H 17 23.090 0 0.514 1.380 27.871 0.000 0.000 LGA K 18 K 18 17.719 0 0.580 0.906 19.537 0.000 0.000 LGA I 19 I 19 17.387 0 0.678 0.589 17.604 0.000 0.000 LGA E 20 E 20 17.667 0 0.395 0.691 23.840 0.000 0.000 LGA F 21 F 21 14.676 0 0.648 0.673 15.687 0.000 0.000 LGA E 22 E 22 16.432 0 0.500 0.676 19.509 0.000 0.000 LGA H 23 H 23 15.161 0 0.330 0.305 18.171 0.000 0.000 LGA G 24 G 24 15.928 0 0.299 0.299 17.318 0.000 0.000 LGA T 25 T 25 12.746 0 0.065 0.136 13.374 0.000 0.068 LGA T 26 T 26 10.454 0 0.563 0.615 12.121 0.000 0.204 LGA S 27 S 27 14.255 0 0.558 0.774 17.312 0.000 0.000 LGA G 28 G 28 11.746 0 0.702 0.702 15.266 0.000 0.000 LGA K 29 K 29 16.638 0 0.079 0.968 25.107 0.000 0.000 LGA R 30 R 30 16.796 0 0.200 1.322 21.485 0.000 0.000 LGA V 31 V 31 22.777 0 0.588 1.412 26.470 0.000 0.000 LGA V 32 V 32 22.345 0 0.660 1.312 24.377 0.000 0.000 LGA Y 33 Y 33 22.171 0 0.453 1.346 26.374 0.000 0.000 LGA V 34 V 34 25.787 0 0.614 1.151 28.911 0.000 0.000 LGA D 35 D 35 32.474 0 0.099 1.388 35.947 0.000 0.000 LGA G 36 G 36 31.887 0 0.337 0.337 31.887 0.000 0.000 LGA K 37 K 37 30.756 0 0.600 1.343 31.637 0.000 0.000 LGA E 38 E 38 24.188 0 0.344 0.843 26.562 0.000 0.000 LGA E 39 E 39 22.526 0 0.647 1.409 29.121 0.000 0.000 LGA I 40 I 40 17.494 0 0.094 0.266 18.788 0.000 0.000 LGA R 41 R 41 13.257 0 0.093 1.132 18.861 0.000 0.000 LGA K 42 K 42 6.638 0 0.030 1.105 8.581 22.738 17.513 LGA E 43 E 43 2.877 0 0.481 1.431 6.217 50.833 43.862 LGA W 44 W 44 2.399 0 0.699 1.550 9.205 61.071 40.408 LGA M 45 M 45 2.524 0 0.115 0.939 5.103 57.262 48.155 LGA F 46 F 46 2.789 0 0.630 1.106 6.353 45.595 60.087 LGA K 47 K 47 3.235 0 0.088 1.127 3.940 59.167 55.820 LGA L 48 L 48 4.194 0 0.612 0.558 11.327 49.048 26.726 LGA V 49 V 49 2.151 0 0.637 1.025 6.518 62.381 51.020 LGA G 50 G 50 3.353 0 0.692 0.692 3.353 65.238 65.238 LGA K 51 K 51 2.168 0 0.688 0.766 3.654 66.786 59.259 LGA E 52 E 52 4.510 0 0.132 1.453 6.335 27.976 30.159 LGA T 53 T 53 6.454 0 0.069 1.086 7.719 14.405 14.014 LGA F 54 F 54 10.119 0 0.567 1.216 11.799 0.714 0.476 LGA Y 55 Y 55 10.370 0 0.682 1.446 10.680 0.476 0.516 LGA V 56 V 56 12.803 0 0.593 0.628 17.335 0.000 0.000 LGA G 57 G 57 18.685 0 0.642 0.642 19.780 0.000 0.000 LGA A 58 A 58 20.187 0 0.500 0.466 20.377 0.000 0.000 LGA A 59 A 59 22.575 0 0.724 0.696 24.528 0.000 0.000 LGA K 60 K 60 20.683 0 0.356 1.064 23.455 0.000 0.000 LGA T 61 T 61 25.421 0 0.544 0.555 28.232 0.000 0.000 LGA K 62 K 62 25.180 0 0.301 0.617 30.216 0.000 0.000 LGA A 63 A 63 22.250 0 0.217 0.214 22.931 0.000 0.000 LGA T 64 T 64 20.457 0 0.041 1.111 24.392 0.000 0.000 LGA I 65 I 65 15.042 0 0.130 0.141 16.434 0.000 0.357 LGA N 66 N 66 17.759 0 0.140 1.074 22.556 0.000 0.000 LGA I 67 I 67 13.099 0 0.027 0.109 15.192 0.000 1.012 LGA D 68 D 68 16.214 0 0.052 1.091 21.894 0.000 0.000 LGA A 69 A 69 14.044 0 0.124 0.189 17.787 0.000 0.000 LGA I 70 I 70 17.974 0 0.188 0.951 19.967 0.000 0.000 LGA S 71 S 71 22.577 0 0.098 0.622 26.906 0.000 0.000 LGA G 72 G 72 23.379 0 0.372 0.372 23.379 0.000 0.000 LGA F 73 F 73 17.563 0 0.561 1.526 19.259 0.000 0.000 LGA A 74 A 74 19.544 0 0.219 0.295 21.591 0.000 0.000 LGA Y 75 Y 75 18.220 0 0.101 1.426 21.465 0.000 0.000 LGA E 76 E 76 21.566 0 0.555 1.059 23.046 0.000 0.000 LGA Y 77 Y 77 21.639 0 0.070 1.209 21.675 0.000 0.000 LGA T 78 T 78 22.625 0 0.538 1.352 23.951 0.000 0.000 LGA L 79 L 79 23.214 0 0.634 1.392 25.131 0.000 0.000 LGA E 80 E 80 27.523 0 0.028 1.012 30.717 0.000 0.000 LGA I 81 I 81 33.373 0 0.045 0.792 35.208 0.000 0.000 LGA N 82 N 82 38.973 0 0.099 1.363 43.953 0.000 0.000 LGA G 83 G 83 35.842 0 0.326 0.326 36.556 0.000 0.000 LGA K 84 K 84 38.916 0 0.551 0.863 46.229 0.000 0.000 LGA S 85 S 85 37.957 0 0.456 0.763 38.491 0.000 0.000 LGA L 86 L 86 35.095 0 0.573 0.500 36.002 0.000 0.000 LGA K 87 K 87 32.634 0 0.283 0.765 36.445 0.000 0.000 LGA K 88 K 88 35.733 0 0.562 1.230 43.927 0.000 0.000 LGA Y 89 Y 89 34.756 0 0.064 1.153 40.016 0.000 0.000 LGA M 90 M 90 36.599 0 0.458 1.296 36.813 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 14.336 14.319 14.848 10.993 9.958 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 15 2.78 15.556 13.430 0.520 LGA_LOCAL RMSD: 2.782 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.588 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 14.336 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.749935 * X + 0.359301 * Y + 0.555427 * Z + 26.937853 Y_new = -0.026936 * X + -0.822352 * Y + 0.568341 * Z + 40.133965 Z_new = 0.660962 * X + -0.441180 * Y + -0.607033 * Z + -20.451834 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.035902 -0.722101 -2.513119 [DEG: -2.0570 -41.3733 -143.9911 ] ZXZ: 2.367685 2.223118 2.159362 [DEG: 135.6584 127.3753 123.7223 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS436_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS436_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 15 2.78 13.430 14.34 REMARK ---------------------------------------------------------- MOLECULE T0540TS436_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REFINED REMARK PARENT 2WDQ_B ATOM 1 N MET 1 36.978 8.986 3.124 1.00 5.70 N ATOM 2 CA MET 1 37.444 9.376 4.387 1.00 5.67 C ATOM 3 C MET 1 36.551 8.811 5.504 1.00 5.69 C ATOM 4 O MET 1 35.515 8.180 5.196 1.00 5.71 O ATOM 5 CB MET 1 37.484 10.930 4.484 1.00 5.76 C ATOM 6 CG MET 1 38.582 11.472 3.510 1.00 3.72 C ATOM 7 SD MET 1 38.711 13.299 3.545 1.00 2.97 S ATOM 8 CE MET 1 40.098 13.641 2.398 1.00 1.95 C ATOM 18 N THR 2 36.956 9.020 6.730 1.00 0.85 N ATOM 19 CA THR 2 36.407 8.395 7.877 1.00 0.71 C ATOM 20 C THR 2 34.930 8.840 8.130 1.00 2.02 C ATOM 21 O THR 2 34.679 9.559 9.111 1.00 2.40 O ATOM 22 CB THR 2 37.399 8.627 9.066 1.00 0.92 C ATOM 26 OG1 THR 2 37.600 10.106 9.272 1.00 1.30 O ATOM 28 CG2 THR 2 38.779 7.939 8.804 1.00 1.30 C ATOM 32 N ASP 3 34.029 8.393 7.280 1.00 25.15 N ATOM 33 CA ASP 3 32.612 8.495 7.346 1.00 24.78 C ATOM 34 C ASP 3 31.995 8.973 5.975 1.00 24.65 C ATOM 35 O ASP 3 30.760 9.129 5.949 1.00 24.33 O ATOM 36 CB ASP 3 31.954 9.248 8.580 1.00 23.83 C ATOM 37 CG ASP 3 32.154 8.520 9.930 1.00 24.07 C ATOM 38 OD1 ASP 3 32.798 7.439 9.990 1.00 25.54 O ATOM 39 OD2 ASP 3 31.657 9.008 10.978 1.00 22.92 O ATOM 44 N LEU 4 32.731 9.127 4.883 1.00 0.68 N ATOM 45 CA LEU 4 32.153 9.666 3.677 1.00 0.41 C ATOM 46 C LEU 4 33.131 9.611 2.479 1.00 0.28 C ATOM 47 O LEU 4 34.352 9.787 2.692 1.00 0.15 O ATOM 48 CB LEU 4 31.757 11.177 3.879 1.00 0.48 C ATOM 49 CG LEU 4 31.149 11.956 2.660 1.00 0.45 C ATOM 50 CD1 LEU 4 29.840 11.300 2.123 1.00 0.35 C ATOM 51 CD2 LEU 4 30.832 13.419 3.102 1.00 0.91 C ATOM 63 N VAL 5 32.634 9.444 1.280 1.00 0.45 N ATOM 64 CA VAL 5 33.414 9.648 0.111 1.00 0.52 C ATOM 65 C VAL 5 33.817 11.139 -0.061 1.00 0.65 C ATOM 66 O VAL 5 33.485 11.759 -1.096 1.00 1.16 O ATOM 67 CB VAL 5 32.666 9.068 -1.147 1.00 0.92 C ATOM 71 CG1 VAL 5 31.320 9.781 -1.517 1.00 1.30 C ATOM 72 CG2 VAL 5 33.599 8.942 -2.398 1.00 1.30 C ATOM 79 N ALA 6 34.519 11.694 0.885 1.00 1.57 N ATOM 80 CA ALA 6 34.920 13.037 0.752 1.00 1.75 C ATOM 81 C ALA 6 36.283 13.067 0.076 1.00 2.44 C ATOM 82 O ALA 6 37.284 12.620 0.669 1.00 3.45 O ATOM 83 CB ALA 6 34.929 13.778 2.093 1.00 2.00 C ATOM 89 N VAL 7 36.287 13.570 -1.115 1.00 3.96 N ATOM 90 CA VAL 7 37.410 14.270 -1.584 1.00 3.49 C ATOM 91 C VAL 7 37.149 15.791 -1.489 1.00 4.14 C ATOM 92 O VAL 7 38.095 16.570 -1.722 1.00 3.34 O ATOM 93 CB VAL 7 37.713 13.848 -3.069 1.00 3.56 C ATOM 97 CG1 VAL 7 36.659 14.392 -4.092 1.00 1.30 C ATOM 98 CG2 VAL 7 37.843 12.296 -3.213 1.00 1.30 C ATOM 105 N TRP 8 35.928 16.205 -1.251 1.00 4.51 N ATOM 106 CA TRP 8 35.593 17.559 -1.435 1.00 3.51 C ATOM 107 C TRP 8 36.179 18.396 -0.258 1.00 2.47 C ATOM 108 O TRP 8 35.786 18.156 0.906 1.00 2.84 O ATOM 109 CB TRP 8 34.038 17.685 -1.644 1.00 3.60 C ATOM 110 CG TRP 8 33.560 18.939 -2.404 1.00 2.08 C ATOM 115 CD1 TRP 8 32.206 19.129 -2.671 1.00 1.30 C ATOM 116 CD2 TRP 8 34.191 20.112 -2.868 1.00 1.30 C ATOM 117 NE1 TRP 8 32.002 20.364 -3.173 1.00 1.30 N ATOM 118 CE2 TRP 8 33.188 20.977 -3.280 1.00 1.30 C ATOM 119 CE3 TRP 8 35.531 20.532 -2.952 1.00 1.30 C ATOM 120 CZ2 TRP 8 33.445 22.281 -3.709 1.00 1.30 C ATOM 121 CZ3 TRP 8 35.816 21.840 -3.377 1.00 1.30 C ATOM 122 CH2 TRP 8 34.779 22.716 -3.740 1.00 1.30 H ATOM 129 N ASP 9 37.094 19.292 -0.531 1.00 1.76 N ATOM 130 CA ASP 9 37.471 20.306 0.389 1.00 0.60 C ATOM 131 C ASP 9 36.282 21.178 0.843 1.00 0.21 C ATOM 132 O ASP 9 36.184 22.350 0.431 1.00 0.47 O ATOM 133 CB ASP 9 38.590 21.184 -0.258 1.00 1.09 C ATOM 134 CG ASP 9 39.298 22.142 0.725 1.00 1.55 C ATOM 135 OD1 ASP 9 38.985 22.158 1.943 1.00 1.81 O ATOM 136 OD2 ASP 9 40.205 22.908 0.305 1.00 2.46 O ATOM 141 N VAL 10 35.449 20.637 1.674 1.00 0.49 N ATOM 142 CA VAL 10 34.305 21.315 2.134 1.00 0.64 C ATOM 143 C VAL 10 34.317 21.506 3.661 1.00 0.46 C ATOM 144 O VAL 10 35.266 21.065 4.345 1.00 0.40 O ATOM 145 CB VAL 10 33.027 20.501 1.786 1.00 0.82 C ATOM 149 CG1 VAL 10 32.963 19.058 2.399 1.00 1.30 C ATOM 150 CG2 VAL 10 32.814 20.475 0.257 1.00 1.30 C ATOM 157 N ALA 11 33.294 22.142 4.153 1.00 0.54 N ATOM 158 CA ALA 11 33.085 22.274 5.532 1.00 0.44 C ATOM 159 C ALA 11 32.530 21.015 6.205 1.00 0.34 C ATOM 160 O ALA 11 31.782 20.253 5.559 1.00 0.23 O ATOM 161 CB ALA 11 32.097 23.431 5.775 1.00 0.54 C ATOM 167 N LEU 12 32.772 20.871 7.474 1.00 0.34 N ATOM 168 CA LEU 12 32.210 19.797 8.196 1.00 0.24 C ATOM 169 C LEU 12 30.661 19.757 8.016 1.00 0.17 C ATOM 170 O LEU 12 30.152 18.666 7.692 1.00 0.19 O ATOM 171 CB LEU 12 32.791 19.709 9.655 1.00 0.48 C ATOM 172 CG LEU 12 32.476 18.305 10.299 1.00 0.91 C ATOM 173 CD1 LEU 12 33.193 17.110 9.574 1.00 1.02 C ATOM 174 CD2 LEU 12 32.892 18.313 11.794 1.00 1.42 C ATOM 186 N SER 13 29.978 20.878 8.041 1.00 0.25 N ATOM 187 CA SER 13 28.570 20.893 7.825 1.00 0.19 C ATOM 188 C SER 13 28.150 20.259 6.459 1.00 0.14 C ATOM 189 O SER 13 27.109 19.565 6.441 1.00 0.14 O ATOM 190 CB SER 13 27.978 22.327 7.948 1.00 0.21 C ATOM 195 OG SER 13 26.473 22.277 7.924 1.00 1.30 O ATOM 197 N ASP 14 28.937 20.381 5.410 1.00 0.21 N ATOM 198 CA ASP 14 28.628 19.730 4.193 1.00 0.19 C ATOM 199 C ASP 14 28.730 18.195 4.383 1.00 0.21 C ATOM 200 O ASP 14 27.769 17.487 4.015 1.00 0.16 O ATOM 201 CB ASP 14 29.593 20.211 3.080 1.00 0.26 C ATOM 202 CG ASP 14 29.328 21.687 2.712 1.00 0.30 C ATOM 203 OD1 ASP 14 28.223 22.020 2.209 1.00 0.22 O ATOM 204 OD2 ASP 14 30.211 22.561 2.915 1.00 0.89 O ATOM 209 N GLY 15 29.764 17.742 5.040 1.00 0.23 N ATOM 210 CA GLY 15 29.871 16.377 5.392 1.00 0.11 C ATOM 211 C GLY 15 28.662 15.901 6.234 1.00 0.13 C ATOM 212 O GLY 15 27.966 14.983 5.770 1.00 0.36 O ATOM 216 N VAL 16 28.362 16.530 7.344 1.00 0.20 N ATOM 217 CA VAL 16 27.209 16.180 8.106 1.00 0.10 C ATOM 218 C VAL 16 25.933 16.123 7.244 1.00 0.24 C ATOM 219 O VAL 16 25.279 15.064 7.280 1.00 0.27 O ATOM 220 CB VAL 16 26.958 17.163 9.290 1.00 0.12 C ATOM 224 CG1 VAL 16 28.182 17.167 10.266 1.00 1.30 C ATOM 225 CG2 VAL 16 25.677 16.788 10.114 1.00 1.30 C ATOM 232 N HIS 17 25.603 17.118 6.464 1.00 0.24 N ATOM 233 CA HIS 17 24.509 16.977 5.571 1.00 0.17 C ATOM 234 C HIS 17 24.653 15.663 4.759 1.00 0.25 C ATOM 235 O HIS 17 23.863 14.754 5.068 1.00 0.76 O ATOM 236 CB HIS 17 24.360 18.272 4.713 1.00 0.19 C ATOM 241 CG HIS 17 23.160 18.154 3.752 1.00 1.30 C ATOM 242 ND1 HIS 17 21.911 18.863 3.881 1.00 1.30 N ATOM 243 CD2 HIS 17 23.073 17.364 2.631 1.00 1.30 C ATOM 244 CE1 HIS 17 21.128 18.475 2.892 1.00 1.30 C ATOM 245 NE2 HIS 17 21.765 17.508 1.994 1.00 1.30 N ATOM 249 N LYS 18 25.666 15.474 3.961 1.00 0.38 N ATOM 250 CA LYS 18 25.850 14.239 3.270 1.00 0.33 C ATOM 251 C LYS 18 26.120 12.973 4.163 1.00 0.60 C ATOM 252 O LYS 18 26.536 11.950 3.588 1.00 1.49 O ATOM 253 CB LYS 18 27.117 14.395 2.368 1.00 0.51 C ATOM 254 CG LYS 18 27.024 15.561 1.337 1.00 0.59 C ATOM 255 CD LYS 18 28.420 15.763 0.678 1.00 0.73 C ATOM 264 CE LYS 18 28.385 16.923 -0.349 1.00 1.30 C ATOM 267 NZ LYS 18 29.764 17.061 -0.983 1.00 1.30 N ATOM 271 N ILE 19 25.875 12.992 5.456 1.00 0.32 N ATOM 272 CA ILE 19 25.802 11.815 6.254 1.00 0.31 C ATOM 273 C ILE 19 24.480 11.818 7.057 1.00 0.66 C ATOM 274 O ILE 19 24.122 10.743 7.583 1.00 1.09 O ATOM 275 CB ILE 19 26.961 11.778 7.295 1.00 0.34 C ATOM 276 CG1 ILE 19 28.364 11.744 6.568 1.00 0.81 C ATOM 277 CD1 ILE 19 29.539 12.243 7.469 1.00 1.33 C ATOM 283 CG2 ILE 19 26.878 10.572 8.302 1.00 1.30 C ATOM 290 N GLU 20 23.724 12.885 7.063 1.00 0.55 N ATOM 291 CA GLU 20 22.313 12.773 7.090 1.00 0.46 C ATOM 292 C GLU 20 21.917 12.114 5.771 1.00 0.50 C ATOM 293 O GLU 20 21.111 12.685 5.002 1.00 1.94 O ATOM 294 CB GLU 20 21.727 14.212 7.303 1.00 0.60 C ATOM 295 CG GLU 20 20.289 14.197 7.900 1.00 0.56 C ATOM 296 CD GLU 20 19.755 15.610 8.208 1.00 0.77 C ATOM 303 OE1 GLU 20 20.433 16.647 7.954 1.00 1.30 O ATOM 304 OE2 GLU 20 18.589 15.758 8.700 1.00 1.30 O ATOM 305 CA PHE 21 23.373 10.850 4.399 1.00 1.30 C ATOM 306 N PHE 21 22.529 10.986 5.535 1.00 1.30 N ATOM 309 C PHE 21 22.618 11.102 3.100 1.00 1.30 C ATOM 310 O PHE 21 23.261 11.347 2.035 1.00 1.30 O ATOM 311 CB PHE 21 24.168 9.463 4.523 1.00 1.30 C ATOM 314 CG PHE 21 25.482 9.198 3.763 1.00 1.30 C ATOM 315 CD1 PHE 21 26.597 8.713 4.484 1.00 1.30 C ATOM 316 CD2 PHE 21 25.604 9.317 2.364 1.00 1.30 C ATOM 317 CE1 PHE 21 27.792 8.383 3.836 1.00 1.30 C ATOM 318 CE2 PHE 21 26.800 8.986 1.715 1.00 1.30 C ATOM 319 CZ PHE 21 27.891 8.512 2.449 1.00 1.30 C ATOM 325 N GLU 22 21.320 10.875 3.199 1.00 1.95 N ATOM 326 CA GLU 22 21.044 9.518 3.413 1.00 1.84 C ATOM 327 C GLU 22 20.612 9.021 4.903 1.00 1.76 C ATOM 328 O GLU 22 19.379 8.921 5.092 1.00 2.32 O ATOM 329 CB GLU 22 21.785 8.565 2.369 1.00 3.19 C ATOM 330 CG GLU 22 21.330 8.855 0.894 1.00 4.52 C ATOM 331 CD GLU 22 22.031 7.929 -0.115 1.00 5.86 C ATOM 332 OE1 GLU 22 23.286 7.940 -0.217 1.00 4.95 O ATOM 333 OE2 GLU 22 21.350 7.164 -0.848 1.00 7.90 O ATOM 340 N HIS 23 21.448 8.709 5.910 1.00 1.31 N ATOM 341 CA HIS 23 21.005 8.400 7.255 1.00 1.15 C ATOM 342 C HIS 23 20.225 9.547 7.977 1.00 0.85 C ATOM 343 O HIS 23 20.717 10.066 9.008 1.00 0.36 O ATOM 344 CB HIS 23 22.216 7.985 8.213 1.00 1.08 C ATOM 345 CG HIS 23 21.755 7.094 9.387 1.00 1.19 C ATOM 350 ND1 HIS 23 20.822 5.996 9.293 1.00 1.30 N ATOM 351 CD2 HIS 23 22.169 7.164 10.695 1.00 1.30 C ATOM 352 CE1 HIS 23 20.690 5.474 10.497 1.00 1.30 C ATOM 353 NE2 HIS 23 21.519 6.134 11.506 1.00 1.30 N ATOM 357 N GLY 24 19.056 9.884 7.527 1.00 1.19 N ATOM 358 CA GLY 24 18.284 10.878 8.170 1.00 1.01 C ATOM 359 C GLY 24 17.710 10.472 9.568 1.00 0.61 C ATOM 360 O GLY 24 16.475 10.482 9.728 1.00 1.49 O ATOM 364 N THR 25 18.552 10.168 10.525 1.00 0.90 N ATOM 365 CA THR 25 18.248 10.274 11.911 1.00 0.79 C ATOM 366 C THR 25 19.306 11.253 12.534 1.00 0.81 C ATOM 367 O THR 25 19.134 11.670 13.701 1.00 0.82 O ATOM 368 CB THR 25 18.363 8.879 12.623 1.00 0.70 C ATOM 369 OG1 THR 25 19.788 8.391 12.563 1.00 0.75 O ATOM 374 CG2 THR 25 17.437 7.802 11.983 1.00 1.30 C ATOM 378 N THR 26 20.377 11.549 11.842 1.00 0.71 N ATOM 379 CA THR 26 21.509 12.152 12.445 1.00 0.46 C ATOM 380 C THR 26 21.328 13.674 12.738 1.00 0.58 C ATOM 381 O THR 26 21.820 14.530 11.969 1.00 1.25 O ATOM 382 CB THR 26 22.722 11.896 11.480 1.00 0.35 C ATOM 386 OG1 THR 26 22.808 10.433 11.141 1.00 1.30 O ATOM 388 CG2 THR 26 24.087 12.316 12.111 1.00 1.30 C ATOM 392 N SER 27 20.648 13.978 13.802 1.00 0.42 N ATOM 393 CA SER 27 20.234 15.308 14.068 1.00 0.34 C ATOM 394 C SER 27 21.237 16.324 14.707 1.00 0.26 C ATOM 395 O SER 27 21.641 16.147 15.881 1.00 0.65 O ATOM 396 CB SER 27 19.007 15.152 14.991 1.00 0.40 C ATOM 397 OG SER 27 17.831 14.648 14.197 1.00 0.95 O ATOM 403 N GLY 28 21.555 17.414 13.959 1.00 0.41 N ATOM 404 CA GLY 28 22.141 18.598 14.485 1.00 0.25 C ATOM 405 C GLY 28 21.362 19.899 14.137 1.00 0.31 C ATOM 406 O GLY 28 20.327 19.809 13.447 1.00 0.40 O ATOM 410 N LYS 29 21.838 21.049 14.568 1.00 0.28 N ATOM 411 CA LYS 29 21.268 22.304 14.194 1.00 0.30 C ATOM 412 C LYS 29 22.203 23.003 13.204 1.00 0.43 C ATOM 413 O LYS 29 23.375 23.278 13.535 1.00 0.93 O ATOM 414 CB LYS 29 21.027 23.284 15.392 1.00 0.31 C ATOM 415 CG LYS 29 20.150 22.653 16.521 1.00 0.12 C ATOM 416 CD LYS 29 19.837 23.675 17.665 1.00 0.32 C ATOM 425 CE LYS 29 18.746 24.716 17.271 1.00 1.30 C ATOM 428 NZ LYS 29 18.424 25.604 18.475 1.00 1.30 N ATOM 432 N ARG 30 21.683 23.283 12.055 1.00 0.41 N ATOM 433 CA ARG 30 22.183 24.303 11.225 1.00 0.21 C ATOM 434 C ARG 30 20.997 25.251 10.941 1.00 0.51 C ATOM 435 O ARG 30 19.893 25.014 11.473 1.00 1.05 O ATOM 436 CB ARG 30 22.735 23.620 9.917 1.00 0.25 C ATOM 437 CG ARG 30 21.685 23.018 8.919 1.00 0.29 C ATOM 438 CD ARG 30 21.025 21.683 9.399 1.00 0.56 C ATOM 439 NE ARG 30 20.316 21.061 8.351 1.00 0.79 N ATOM 440 CZ ARG 30 19.120 21.557 7.828 1.00 0.61 C ATOM 441 NH1 ARG 30 18.529 22.620 8.324 1.00 0.51 H ATOM 442 NH2 ARG 30 18.568 20.938 6.814 1.00 0.77 H ATOM 456 N VAL 31 21.197 26.244 10.128 1.00 0.35 N ATOM 457 CA VAL 31 20.107 26.967 9.597 1.00 0.68 C ATOM 458 C VAL 31 20.581 27.697 8.329 1.00 0.80 C ATOM 459 O VAL 31 19.947 27.507 7.273 1.00 1.31 O ATOM 460 CB VAL 31 19.322 27.917 10.611 1.00 0.77 C ATOM 464 CG1 VAL 31 20.057 29.158 11.204 1.00 1.30 C ATOM 465 CG2 VAL 31 17.960 28.353 9.968 1.00 1.30 C ATOM 472 N VAL 32 21.645 28.449 8.404 1.00 0.61 N ATOM 473 CA VAL 32 21.981 29.357 7.376 1.00 0.81 C ATOM 474 C VAL 32 23.341 29.076 6.724 1.00 0.49 C ATOM 475 O VAL 32 23.579 29.663 5.653 1.00 0.43 O ATOM 476 CB VAL 32 21.943 30.813 7.964 1.00 1.21 C ATOM 480 CG1 VAL 32 20.470 31.219 8.308 1.00 1.30 C ATOM 481 CG2 VAL 32 22.419 31.886 6.922 1.00 1.30 C ATOM 488 N TYR 33 24.203 28.305 7.328 1.00 0.33 N ATOM 489 CA TYR 33 25.588 28.514 7.146 1.00 1.07 C ATOM 490 C TYR 33 25.930 30.025 7.550 1.00 2.15 C ATOM 491 O TYR 33 26.660 30.688 6.794 1.00 2.93 O ATOM 492 CB TYR 33 26.123 27.863 5.799 1.00 1.56 C ATOM 493 CG TYR 33 25.561 28.331 4.466 1.00 1.61 C ATOM 494 CZ TYR 33 24.542 29.151 1.976 1.00 0.62 C ATOM 499 CD1 TYR 33 26.065 29.483 3.840 1.00 1.30 C ATOM 500 CD2 TYR 33 24.546 27.590 3.834 1.00 1.30 C ATOM 503 CE1 TYR 33 25.548 29.952 2.587 1.00 1.30 C ATOM 504 CE2 TYR 33 24.033 28.059 2.580 1.00 1.30 C ATOM 507 OH TYR 33 24.068 29.591 0.806 1.00 1.30 H ATOM 509 N VAL 34 25.409 30.591 8.669 1.00 3.18 N ATOM 510 CA VAL 34 25.835 31.834 9.270 1.00 2.78 C ATOM 511 C VAL 34 25.370 31.938 10.779 1.00 2.12 C ATOM 512 O VAL 34 26.218 32.238 11.650 1.00 2.93 O ATOM 513 CB VAL 34 25.497 33.179 8.486 1.00 2.21 C ATOM 514 CG1 VAL 34 24.251 33.966 9.016 1.00 2.61 C ATOM 515 CG2 VAL 34 26.726 34.151 8.505 1.00 1.49 C ATOM 525 N ASP 35 24.108 31.721 11.073 1.00 1.16 N ATOM 526 CA ASP 35 23.472 32.265 12.230 1.00 0.33 C ATOM 527 C ASP 35 23.792 31.595 13.594 1.00 0.39 C ATOM 528 O ASP 35 22.850 31.149 14.285 1.00 1.01 O ATOM 529 CB ASP 35 21.935 32.124 11.933 1.00 0.78 C ATOM 534 CG ASP 35 21.060 32.926 12.918 1.00 1.30 C ATOM 535 OD1 ASP 35 21.199 34.173 13.013 1.00 1.30 O ATOM 536 OD2 ASP 35 20.200 32.335 13.622 1.00 1.30 O ATOM 537 N GLY 36 25.029 31.519 13.979 1.00 0.53 N ATOM 538 CA GLY 36 25.364 30.874 15.192 1.00 0.46 C ATOM 539 C GLY 36 25.123 29.346 15.215 1.00 0.79 C ATOM 540 O GLY 36 26.133 28.632 15.330 1.00 2.06 O ATOM 544 N LYS 37 23.899 28.876 15.106 1.00 0.54 N ATOM 545 CA LYS 37 23.504 27.499 15.108 1.00 0.49 C ATOM 546 C LYS 37 24.550 26.382 15.450 1.00 0.62 C ATOM 547 O LYS 37 24.311 25.617 16.425 1.00 0.73 O ATOM 548 CB LYS 37 22.620 27.134 13.848 1.00 0.44 C ATOM 553 CG LYS 37 22.801 28.003 12.551 1.00 1.30 C ATOM 556 CD LYS 37 24.040 27.890 11.589 1.00 1.30 C ATOM 559 CE LYS 37 25.279 28.687 12.077 1.00 1.30 C ATOM 562 NZ LYS 37 26.321 28.957 10.995 1.00 1.30 N ATOM 566 N GLU 38 25.640 26.269 14.721 1.00 0.65 N ATOM 567 CA GLU 38 26.174 24.997 14.435 1.00 0.50 C ATOM 568 C GLU 38 27.459 24.783 15.243 1.00 0.38 C ATOM 569 O GLU 38 28.511 24.425 14.673 1.00 0.50 O ATOM 570 CB GLU 38 26.248 24.893 12.905 1.00 0.81 C ATOM 571 CG GLU 38 27.296 25.659 12.066 1.00 0.82 C ATOM 578 CD GLU 38 26.822 25.604 10.587 1.00 1.30 C ATOM 579 OE1 GLU 38 26.807 26.646 9.890 1.00 1.30 O ATOM 580 OE2 GLU 38 26.403 24.530 10.085 1.00 1.30 O ATOM 581 N GLU 39 27.351 24.980 16.522 1.00 0.32 N ATOM 582 CA GLU 39 28.478 24.999 17.369 1.00 0.21 C ATOM 583 C GLU 39 28.696 23.567 17.897 1.00 0.35 C ATOM 584 O GLU 39 27.757 23.024 18.508 1.00 0.57 O ATOM 587 CB GLU 39 28.221 26.048 18.502 1.00 1.30 C ATOM 590 CG GLU 39 29.499 26.248 19.382 1.00 1.30 C ATOM 593 CD GLU 39 29.280 27.351 20.433 1.00 1.30 C ATOM 594 OE1 GLU 39 29.999 28.385 20.420 1.00 1.30 O ATOM 595 OE2 GLU 39 28.385 27.221 21.308 1.00 1.30 O ATOM 596 N ILE 40 29.819 22.956 17.608 1.00 0.15 N ATOM 597 CA ILE 40 30.040 21.595 17.990 1.00 0.21 C ATOM 598 C ILE 40 31.544 21.414 18.318 1.00 0.16 C ATOM 599 O ILE 40 32.356 22.274 17.918 1.00 0.25 O ATOM 600 CB ILE 40 29.634 20.641 16.808 1.00 0.56 C ATOM 601 CG1 ILE 40 28.201 21.046 16.179 1.00 0.86 C ATOM 602 CD1 ILE 40 27.728 20.217 14.948 1.00 1.40 C ATOM 608 CG2 ILE 40 29.625 19.154 17.140 1.00 1.30 C ATOM 615 N ARG 41 31.873 20.378 18.981 1.00 0.17 N ATOM 616 CA ARG 41 33.215 20.107 19.326 1.00 0.24 C ATOM 617 C ARG 41 33.832 19.202 18.260 1.00 0.27 C ATOM 618 O ARG 41 33.432 18.023 18.163 1.00 0.22 O ATOM 619 CB ARG 41 33.230 19.421 20.719 1.00 0.24 C ATOM 620 CG ARG 41 34.645 19.172 21.326 1.00 0.32 C ATOM 627 CD ARG 41 34.631 17.983 22.341 1.00 1.30 C ATOM 630 NE ARG 41 33.564 18.075 23.256 1.00 1.30 N ATOM 632 CZ ARG 41 33.216 17.025 24.105 1.00 1.30 C ATOM 633 NH1 ARG 41 33.676 15.807 23.930 1.00 1.30 H ATOM 634 NH2 ARG 41 32.403 17.256 25.102 1.00 1.30 H ATOM 639 N LYS 42 34.740 19.727 17.502 1.00 0.30 N ATOM 640 CA LYS 42 35.299 19.042 16.402 1.00 0.24 C ATOM 641 C LYS 42 36.767 18.814 16.760 1.00 0.14 C ATOM 642 O LYS 42 37.515 19.800 16.923 1.00 0.18 O ATOM 643 CB LYS 42 35.155 19.914 15.138 1.00 0.21 C ATOM 644 CG LYS 42 33.643 20.220 14.855 1.00 0.19 C ATOM 651 CD LYS 42 33.401 21.317 13.775 1.00 1.30 C ATOM 654 CE LYS 42 33.874 22.722 14.223 1.00 1.30 C ATOM 657 NZ LYS 42 35.394 22.850 14.119 1.00 1.30 N ATOM 661 N GLU 43 37.141 17.582 16.960 1.00 0.10 N ATOM 662 CA GLU 43 38.449 17.274 17.408 1.00 0.15 C ATOM 663 C GLU 43 38.736 18.116 18.668 1.00 0.32 C ATOM 664 O GLU 43 39.581 19.033 18.608 1.00 0.92 O ATOM 665 CB GLU 43 39.473 17.461 16.236 1.00 0.14 C ATOM 666 CG GLU 43 39.278 16.290 15.221 1.00 0.29 C ATOM 673 CD GLU 43 40.032 16.549 13.918 1.00 1.30 C ATOM 674 OE1 GLU 43 41.284 16.673 13.917 1.00 1.30 O ATOM 675 OE2 GLU 43 39.388 16.634 12.842 1.00 1.30 O ATOM 676 N TRP 44 37.989 17.889 19.708 1.00 0.19 N ATOM 677 CA TRP 44 38.138 18.589 20.930 1.00 0.14 C ATOM 678 C TRP 44 37.880 20.127 20.898 1.00 0.17 C ATOM 679 O TRP 44 37.672 20.682 21.995 1.00 0.32 O ATOM 682 CB TRP 44 39.457 18.214 21.680 1.00 1.30 C ATOM 685 CG TRP 44 39.470 16.717 21.941 1.00 1.30 C ATOM 686 CD1 TRP 44 38.885 16.078 23.033 1.00 1.30 C ATOM 687 CD2 TRP 44 39.927 15.708 21.104 1.00 1.30 C ATOM 688 NE1 TRP 44 38.972 14.739 22.858 1.00 1.30 N ATOM 689 CE2 TRP 44 39.590 14.502 21.686 1.00 1.30 C ATOM 690 CE3 TRP 44 40.585 15.761 19.871 1.00 1.30 C ATOM 691 CZ2 TRP 44 39.868 13.284 21.063 1.00 1.30 C ATOM 692 CZ3 TRP 44 40.867 14.546 19.219 1.00 1.30 C ATOM 693 CH2 TRP 44 40.507 13.316 19.810 1.00 1.30 H ATOM 700 N MET 45 37.903 20.791 19.771 1.00 0.19 N ATOM 701 CA MET 45 37.817 22.222 19.740 1.00 0.24 C ATOM 702 C MET 45 36.393 22.686 19.319 1.00 0.09 C ATOM 703 O MET 45 35.878 22.215 18.282 1.00 0.20 O ATOM 704 CB MET 45 38.927 22.712 18.761 1.00 0.37 C ATOM 705 CG MET 45 39.156 24.259 18.773 1.00 0.45 C ATOM 712 SD MET 45 38.156 25.122 17.503 1.00 1.30 S ATOM 713 CE MET 45 38.679 26.870 17.686 1.00 1.30 C ATOM 717 N PHE 46 35.783 23.551 20.092 1.00 0.13 N ATOM 718 CA PHE 46 34.495 24.057 19.774 1.00 0.11 C ATOM 719 C PHE 46 34.537 24.974 18.517 1.00 0.12 C ATOM 720 O PHE 46 35.287 25.966 18.550 1.00 0.55 O ATOM 721 CB PHE 46 33.869 24.930 20.925 1.00 0.15 C ATOM 722 CG PHE 46 33.684 24.370 22.323 1.00 0.58 C ATOM 727 CD1 PHE 46 33.085 25.222 23.268 1.00 1.30 C ATOM 728 CD2 PHE 46 34.103 23.090 22.718 1.00 1.30 C ATOM 729 CE1 PHE 46 32.952 24.824 24.600 1.00 1.30 C ATOM 730 CE2 PHE 46 33.981 22.696 24.057 1.00 1.30 C ATOM 731 CZ PHE 46 33.422 23.572 24.998 1.00 1.30 C ATOM 737 N LYS 47 33.755 24.712 17.501 1.00 0.38 N ATOM 738 CA LYS 47 33.631 25.639 16.422 1.00 0.33 C ATOM 739 C LYS 47 32.344 25.435 15.574 1.00 0.33 C ATOM 740 O LYS 47 31.559 24.497 15.838 1.00 0.55 O ATOM 743 CB LYS 47 34.862 25.547 15.451 1.00 1.30 C ATOM 746 CG LYS 47 35.707 26.864 15.411 1.00 1.30 C ATOM 749 CD LYS 47 34.988 28.050 14.689 1.00 1.30 C ATOM 752 CE LYS 47 35.919 29.297 14.622 1.00 1.30 C ATOM 755 NZ LYS 47 35.194 30.455 13.933 1.00 1.30 N ATOM 759 N LEU 48 32.151 26.296 14.603 1.00 0.09 N ATOM 760 CA LEU 48 31.054 26.206 13.721 1.00 0.12 C ATOM 761 C LEU 48 31.309 25.179 12.585 1.00 0.12 C ATOM 762 O LEU 48 32.193 25.393 11.721 1.00 0.15 O ATOM 763 CB LEU 48 30.665 27.581 13.095 1.00 0.27 C ATOM 764 CG LEU 48 30.320 28.711 14.125 1.00 0.19 C ATOM 765 CD1 LEU 48 29.932 30.013 13.352 1.00 0.13 C ATOM 766 CD2 LEU 48 29.156 28.301 15.084 1.00 0.18 C ATOM 778 N VAL 49 30.521 24.148 12.558 1.00 0.26 N ATOM 779 CA VAL 49 30.569 23.193 11.505 1.00 0.15 C ATOM 780 C VAL 49 30.415 23.831 10.086 1.00 0.19 C ATOM 781 O VAL 49 31.073 23.321 9.158 1.00 0.17 O ATOM 782 CB VAL 49 29.554 22.025 11.800 1.00 0.39 C ATOM 786 CG1 VAL 49 28.076 22.393 11.973 1.00 1.30 C ATOM 787 CG2 VAL 49 29.655 20.704 11.004 1.00 1.30 C ATOM 794 N GLY 50 29.703 24.924 9.929 1.00 0.13 N ATOM 795 CA GLY 50 29.632 25.623 8.699 1.00 0.21 C ATOM 796 C GLY 50 30.881 26.436 8.285 1.00 0.41 C ATOM 797 O GLY 50 30.787 27.071 7.222 1.00 0.84 O ATOM 801 N LYS 51 31.961 26.493 9.016 1.00 0.37 N ATOM 802 CA LYS 51 33.124 27.200 8.605 1.00 0.45 C ATOM 803 C LYS 51 34.388 26.349 8.839 1.00 0.40 C ATOM 804 O LYS 51 35.433 26.662 8.231 1.00 0.68 O ATOM 805 CB LYS 51 33.198 28.591 9.319 1.00 0.71 C ATOM 810 CG LYS 51 34.179 29.599 8.639 1.00 1.30 C ATOM 813 CD LYS 51 33.961 31.038 9.209 1.00 1.30 C ATOM 816 CE LYS 51 34.886 32.080 8.514 1.00 1.30 C ATOM 819 NZ LYS 51 34.553 33.482 9.029 1.00 1.30 N ATOM 823 N GLU 52 34.337 25.355 9.680 1.00 0.65 N ATOM 824 CA GLU 52 35.441 24.485 9.787 1.00 0.47 C ATOM 825 C GLU 52 35.595 23.616 8.518 1.00 0.30 C ATOM 826 O GLU 52 34.685 22.799 8.253 1.00 0.36 O ATOM 827 CB GLU 52 35.289 23.529 10.998 1.00 0.50 C ATOM 832 CG GLU 52 36.672 22.812 11.282 1.00 1.30 C ATOM 835 CD GLU 52 36.646 21.270 11.329 1.00 1.30 C ATOM 836 OE1 GLU 52 37.696 20.645 11.635 1.00 1.30 O ATOM 837 OE2 GLU 52 35.602 20.629 11.049 1.00 1.30 O ATOM 838 N THR 53 36.657 23.802 7.779 1.00 0.31 N ATOM 839 CA THR 53 36.937 22.980 6.659 1.00 0.29 C ATOM 840 C THR 53 37.416 21.549 7.025 1.00 0.24 C ATOM 841 O THR 53 38.344 21.373 7.843 1.00 0.39 O ATOM 842 CB THR 53 37.879 23.691 5.640 1.00 0.28 C ATOM 846 OG1 THR 53 37.906 22.909 4.354 1.00 1.30 O ATOM 848 CG2 THR 53 39.334 23.861 6.150 1.00 1.30 C ATOM 852 N PHE 54 36.862 20.585 6.353 1.00 0.28 N ATOM 853 CA PHE 54 37.171 19.216 6.543 1.00 0.27 C ATOM 854 C PHE 54 38.685 18.908 6.546 1.00 0.35 C ATOM 855 O PHE 54 39.185 18.292 7.514 1.00 0.40 O ATOM 856 CB PHE 54 36.536 18.445 5.330 1.00 0.24 C ATOM 861 CG PHE 54 36.052 17.041 5.676 1.00 1.30 C ATOM 862 CD1 PHE 54 36.965 15.980 5.788 1.00 1.30 C ATOM 863 CD2 PHE 54 34.675 16.786 5.844 1.00 1.30 C ATOM 864 CE1 PHE 54 36.507 14.683 6.056 1.00 1.30 C ATOM 865 CE2 PHE 54 34.221 15.489 6.110 1.00 1.30 C ATOM 866 CZ PHE 54 35.137 14.435 6.211 1.00 1.30 C ATOM 872 N TYR 55 39.390 19.374 5.564 1.00 0.58 N ATOM 873 CA TYR 55 40.789 19.193 5.494 1.00 0.71 C ATOM 874 C TYR 55 41.648 19.843 6.608 1.00 0.56 C ATOM 875 O TYR 55 42.859 19.559 6.623 1.00 0.74 O ATOM 876 CB TYR 55 41.177 19.842 4.123 1.00 0.98 C ATOM 881 CG TYR 55 42.664 20.066 3.867 1.00 1.30 C ATOM 882 CD1 TYR 55 43.163 21.375 3.730 1.00 1.30 C ATOM 883 CD2 TYR 55 43.546 18.977 3.760 1.00 1.30 C ATOM 886 CE1 TYR 55 44.525 21.592 3.487 1.00 1.30 C ATOM 887 CE2 TYR 55 44.910 19.197 3.520 1.00 1.30 C ATOM 890 CZ TYR 55 45.399 20.503 3.381 1.00 1.30 C ATOM 891 OH TYR 55 46.666 20.706 3.150 1.00 1.30 H ATOM 893 N VAL 56 41.093 20.612 7.502 1.00 0.56 N ATOM 894 CA VAL 56 41.831 21.098 8.601 1.00 0.73 C ATOM 895 C VAL 56 41.531 20.158 9.816 1.00 0.51 C ATOM 896 O VAL 56 42.126 20.371 10.888 1.00 0.48 O ATOM 897 CB VAL 56 41.458 22.619 8.773 1.00 1.00 C ATOM 901 CG1 VAL 56 41.749 23.184 10.201 1.00 1.30 C ATOM 902 CG2 VAL 56 42.221 23.482 7.719 1.00 1.30 C ATOM 909 N GLY 57 40.687 19.159 9.658 1.00 0.48 N ATOM 910 CA GLY 57 40.451 18.161 10.618 1.00 0.52 C ATOM 911 C GLY 57 40.870 16.743 10.153 1.00 0.44 C ATOM 912 O GLY 57 41.122 15.894 11.039 1.00 0.45 O ATOM 916 N ALA 58 40.939 16.466 8.873 1.00 0.48 N ATOM 917 CA ALA 58 41.650 15.316 8.417 1.00 0.45 C ATOM 918 C ALA 58 43.129 15.385 8.872 1.00 0.37 C ATOM 919 O ALA 58 44.010 15.689 8.043 1.00 0.40 O ATOM 920 CB ALA 58 41.619 15.245 6.855 1.00 0.68 C ATOM 926 N ALA 59 43.394 15.067 10.107 1.00 0.86 N ATOM 927 CA ALA 59 44.569 14.341 10.373 1.00 0.57 C ATOM 928 C ALA 59 44.288 12.863 10.022 1.00 0.70 C ATOM 929 O ALA 59 43.114 12.491 9.802 1.00 1.10 O ATOM 930 CB ALA 59 45.050 14.601 11.826 1.00 0.61 C ATOM 936 N LYS 60 45.325 12.106 9.824 1.00 1.10 N ATOM 937 CA LYS 60 45.282 11.129 8.804 1.00 0.89 C ATOM 938 C LYS 60 45.809 9.800 9.376 1.00 0.15 C ATOM 939 O LYS 60 46.970 9.745 9.837 1.00 0.99 O ATOM 940 CB LYS 60 46.007 11.642 7.512 1.00 1.62 C ATOM 941 CG LYS 60 47.525 12.037 7.636 1.00 0.88 C ATOM 942 CD LYS 60 47.849 13.447 8.244 1.00 1.09 C ATOM 951 CE LYS 60 47.320 14.657 7.411 1.00 1.30 C ATOM 954 NZ LYS 60 47.964 14.702 6.024 1.00 1.30 N ATOM 958 N THR 61 44.974 8.796 9.392 1.00 0.41 N ATOM 959 CA THR 61 45.164 7.646 10.196 1.00 0.08 C ATOM 960 C THR 61 45.142 8.066 11.686 1.00 0.91 C ATOM 961 O THR 61 44.201 7.665 12.405 1.00 0.56 O ATOM 964 CB THR 61 46.425 6.801 9.798 1.00 1.30 C ATOM 966 OG1 THR 61 46.458 6.614 8.303 1.00 1.30 O ATOM 968 CG2 THR 61 46.404 5.399 10.476 1.00 1.30 C ATOM 972 CA LYS 62 45.915 9.608 13.313 1.00 1.30 C ATOM 973 N LYS 62 46.071 8.868 12.119 1.00 1.30 N ATOM 976 C LYS 62 44.724 10.604 13.205 1.00 1.30 C ATOM 977 O LYS 62 44.964 11.825 13.155 1.00 1.30 O ATOM 978 CB LYS 62 47.232 10.393 13.640 1.00 1.30 C ATOM 981 CG LYS 62 48.377 9.472 14.166 1.00 1.30 C ATOM 984 CD LYS 62 49.515 10.336 14.798 1.00 1.30 C ATOM 987 CE LYS 62 50.607 9.454 15.469 1.00 1.30 C ATOM 990 NZ LYS 62 51.616 10.352 16.188 1.00 1.30 N ATOM 994 N ALA 63 43.519 10.104 13.246 1.00 2.02 N ATOM 995 CA ALA 63 42.396 10.776 13.793 1.00 1.84 C ATOM 996 C ALA 63 41.213 10.815 12.808 1.00 1.32 C ATOM 997 O ALA 63 41.210 11.618 11.851 1.00 1.80 O ATOM 998 CB ALA 63 42.581 12.197 14.409 1.00 2.07 C ATOM 1004 N THR 64 40.244 9.995 13.105 1.00 0.59 N ATOM 1005 CA THR 64 38.936 10.172 12.621 1.00 0.48 C ATOM 1006 C THR 64 38.347 11.518 13.109 1.00 0.51 C ATOM 1007 O THR 64 38.584 11.893 14.280 1.00 0.73 O ATOM 1008 CB THR 64 38.100 9.006 13.262 1.00 0.42 C ATOM 1012 OG1 THR 64 38.138 9.087 14.769 1.00 1.30 O ATOM 1014 CG2 THR 64 38.563 7.580 12.830 1.00 1.30 C ATOM 1018 N ILE 65 37.610 12.207 12.286 1.00 0.47 N ATOM 1019 CA ILE 65 37.035 13.427 12.710 1.00 0.44 C ATOM 1020 C ILE 65 35.982 13.155 13.807 1.00 0.33 C ATOM 1021 O ILE 65 34.825 12.791 13.497 1.00 0.58 O ATOM 1022 CB ILE 65 36.470 14.279 11.520 1.00 0.57 C ATOM 1023 CG1 ILE 65 37.591 14.530 10.445 1.00 0.57 C ATOM 1024 CG2 ILE 65 35.881 15.636 12.048 1.00 0.56 C ATOM 1025 CD1 ILE 65 37.153 15.469 9.282 1.00 1.10 C ATOM 1037 N ASN 66 36.419 13.254 15.027 1.00 0.41 N ATOM 1038 CA ASN 66 35.556 13.165 16.135 1.00 0.25 C ATOM 1039 C ASN 66 34.649 14.409 16.287 1.00 0.14 C ATOM 1040 O ASN 66 35.177 15.508 16.562 1.00 0.21 O ATOM 1041 CB ASN 66 36.453 12.974 17.398 1.00 0.15 C ATOM 1046 CG ASN 66 35.694 13.079 18.731 1.00 1.30 C ATOM 1047 OD1 ASN 66 34.795 12.309 18.983 1.00 1.30 O ATOM 1048 ND2 ASN 66 36.054 14.055 19.648 1.00 1.30 N ATOM 1051 N ILE 67 33.365 14.230 16.151 1.00 0.15 N ATOM 1052 CA ILE 67 32.413 15.268 16.287 1.00 0.12 C ATOM 1053 C ILE 67 31.548 14.978 17.538 1.00 0.08 C ATOM 1054 O ILE 67 30.892 13.920 17.572 1.00 0.15 O ATOM 1055 CB ILE 67 31.473 15.308 15.017 1.00 0.13 C ATOM 1056 CG1 ILE 67 32.266 15.215 13.673 1.00 0.48 C ATOM 1057 CG2 ILE 67 30.557 16.569 15.060 1.00 0.13 C ATOM 1058 CD1 ILE 67 31.355 15.107 12.410 1.00 0.58 C ATOM 1070 N ASP 68 31.537 15.856 18.501 1.00 0.14 N ATOM 1071 CA ASP 68 30.716 15.697 19.653 1.00 0.11 C ATOM 1072 C ASP 68 29.945 16.979 19.977 1.00 0.10 C ATOM 1073 O ASP 68 30.400 18.069 19.584 1.00 0.18 O ATOM 1074 CB ASP 68 31.622 15.407 20.883 1.00 0.10 C ATOM 1075 CG ASP 68 32.225 13.993 20.848 1.00 0.25 C ATOM 1080 OD1 ASP 68 33.471 13.841 20.931 1.00 1.30 O ATOM 1081 OD2 ASP 68 31.475 12.985 20.761 1.00 1.30 O ATOM 1082 N ALA 69 28.870 16.875 20.703 1.00 0.28 N ATOM 1083 CA ALA 69 28.114 18.015 21.060 1.00 0.27 C ATOM 1084 C ALA 69 28.935 19.069 21.854 1.00 0.26 C ATOM 1085 O ALA 69 30.120 18.820 22.160 1.00 0.57 O ATOM 1086 CB ALA 69 26.883 17.543 21.880 1.00 0.33 C ATOM 1092 N ILE 70 28.363 20.214 22.096 1.00 0.34 N ATOM 1093 CA ILE 70 29.052 21.242 22.783 1.00 0.31 C ATOM 1094 C ILE 70 29.166 20.828 24.271 1.00 0.16 C ATOM 1095 O ILE 70 28.130 20.492 24.882 1.00 0.20 O ATOM 1096 CB ILE 70 28.263 22.590 22.729 1.00 0.30 C ATOM 1097 CG1 ILE 70 27.754 22.990 21.306 1.00 0.82 C ATOM 1098 CD1 ILE 70 26.599 24.041 21.359 1.00 1.20 C ATOM 1104 CG2 ILE 70 29.114 23.751 23.354 1.00 1.30 C ATOM 1111 N SER 71 30.339 20.884 24.832 1.00 0.25 N ATOM 1112 CA SER 71 30.582 20.312 26.103 1.00 0.31 C ATOM 1113 C SER 71 29.724 20.859 27.279 1.00 0.39 C ATOM 1114 O SER 71 28.995 21.853 27.083 1.00 0.74 O ATOM 1115 CB SER 71 32.097 20.507 26.405 1.00 0.35 C ATOM 1120 OG SER 71 32.540 19.564 27.492 1.00 1.30 O ATOM 1122 N GLY 72 29.770 20.220 28.420 1.00 0.56 N ATOM 1123 CA GLY 72 29.037 20.644 29.555 1.00 0.61 C ATOM 1124 C GLY 72 27.511 20.397 29.447 1.00 0.98 C ATOM 1125 O GLY 72 26.949 19.752 30.351 1.00 1.84 O ATOM 1129 N PHE 73 26.874 20.903 28.435 1.00 0.45 N ATOM 1130 CA PHE 73 25.464 20.982 28.387 1.00 0.56 C ATOM 1131 C PHE 73 24.707 19.628 28.303 1.00 0.55 C ATOM 1132 O PHE 73 25.319 18.574 28.029 1.00 0.66 O ATOM 1133 CB PHE 73 25.122 21.798 27.114 1.00 0.74 C ATOM 1134 CG PHE 73 25.275 23.289 27.336 1.00 0.53 C ATOM 1135 CD1 PHE 73 26.344 24.007 26.773 1.00 1.70 C ATOM 1136 CD2 PHE 73 24.317 23.957 28.109 1.00 0.92 C ATOM 1141 CE1 PHE 73 26.474 25.379 27.024 1.00 1.30 C ATOM 1142 CE2 PHE 73 24.436 25.326 28.339 1.00 1.30 C ATOM 1143 CZ PHE 73 25.527 26.036 27.820 1.00 1.30 C ATOM 1149 N ALA 74 23.421 19.673 28.548 1.00 0.49 N ATOM 1150 CA ALA 74 22.596 18.540 28.392 1.00 0.30 C ATOM 1151 C ALA 74 22.290 18.288 26.910 1.00 0.20 C ATOM 1152 O ALA 74 21.646 19.148 26.263 1.00 0.45 O ATOM 1153 CB ALA 74 21.238 18.760 29.106 1.00 0.29 C ATOM 1159 N TYR 75 22.739 17.179 26.406 1.00 0.42 N ATOM 1160 CA TYR 75 22.337 16.739 25.131 1.00 0.22 C ATOM 1161 C TYR 75 20.812 16.485 25.098 1.00 0.20 C ATOM 1162 O TYR 75 20.292 15.761 25.968 1.00 0.34 O ATOM 1163 CB TYR 75 23.143 15.473 24.686 1.00 0.37 C ATOM 1168 CG TYR 75 22.559 14.143 25.144 1.00 1.30 C ATOM 1169 CD1 TYR 75 21.831 13.350 24.240 1.00 1.30 C ATOM 1170 CD2 TYR 75 22.733 13.703 26.467 1.00 1.30 C ATOM 1173 CE1 TYR 75 21.283 12.131 24.654 1.00 1.30 C ATOM 1174 CE2 TYR 75 22.193 12.477 26.877 1.00 1.30 C ATOM 1177 CZ TYR 75 21.467 11.692 25.971 1.00 1.30 C ATOM 1178 OH TYR 75 20.962 10.552 26.355 1.00 1.30 H ATOM 1180 N GLU 76 20.155 17.040 24.128 1.00 0.17 N ATOM 1181 CA GLU 76 18.854 16.631 23.792 1.00 0.17 C ATOM 1182 C GLU 76 18.989 15.412 22.846 1.00 0.31 C ATOM 1183 O GLU 76 18.405 14.363 23.172 1.00 0.36 O ATOM 1184 CB GLU 76 18.080 17.807 23.108 1.00 0.13 C ATOM 1189 CG GLU 76 18.047 19.105 23.974 1.00 1.30 C ATOM 1192 CD GLU 76 17.260 20.214 23.248 1.00 1.30 C ATOM 1193 OE1 GLU 76 16.035 20.059 23.001 1.00 1.30 O ATOM 1194 OE2 GLU 76 17.841 21.274 22.895 1.00 1.30 O ATOM 1195 N TYR 77 19.737 15.505 21.766 1.00 0.34 N ATOM 1196 CA TYR 77 19.767 14.437 20.817 1.00 0.32 C ATOM 1197 C TYR 77 20.971 14.601 19.825 1.00 0.36 C ATOM 1198 O TYR 77 21.077 15.629 19.110 1.00 0.48 O ATOM 1199 CB TYR 77 18.381 14.388 20.064 1.00 0.11 C ATOM 1200 CG TYR 77 18.173 13.258 19.065 1.00 0.65 C ATOM 1201 CZ TYR 77 17.675 11.260 17.136 1.00 0.71 C ATOM 1206 CD1 TYR 77 17.648 13.608 17.739 1.00 1.30 C ATOM 1207 CD2 TYR 77 18.417 11.959 19.342 1.00 1.30 C ATOM 1210 CE1 TYR 77 17.402 12.593 16.808 1.00 1.30 C ATOM 1211 CE2 TYR 77 18.177 10.943 18.406 1.00 1.30 C ATOM 1214 OH TYR 77 17.454 10.318 16.261 1.00 1.30 H ATOM 1216 N THR 78 21.826 13.634 19.724 1.00 0.41 N ATOM 1217 CA THR 78 22.917 13.541 18.809 1.00 0.33 C ATOM 1218 C THR 78 23.947 14.690 18.949 1.00 0.43 C ATOM 1219 O THR 78 25.017 14.454 19.536 1.00 1.10 O ATOM 1220 CB THR 78 22.534 13.200 17.298 1.00 0.36 C ATOM 1224 OG1 THR 78 23.147 14.137 16.296 1.00 1.30 O ATOM 1226 CG2 THR 78 21.017 13.084 17.033 1.00 1.30 C ATOM 1230 N LEU 79 23.661 15.840 18.411 1.00 0.36 N ATOM 1231 CA LEU 79 24.553 16.946 18.460 1.00 0.30 C ATOM 1232 C LEU 79 23.809 18.193 19.029 1.00 0.31 C ATOM 1233 O LEU 79 24.471 19.226 19.255 1.00 0.49 O ATOM 1234 CB LEU 79 25.220 17.197 17.048 1.00 0.30 C ATOM 1235 CG LEU 79 26.156 16.014 16.593 1.00 0.25 C ATOM 1236 CD1 LEU 79 26.569 16.170 15.094 1.00 0.28 C ATOM 1237 CD2 LEU 79 27.441 15.881 17.479 1.00 0.31 C ATOM 1249 N GLU 80 22.523 18.112 19.250 1.00 0.41 N ATOM 1250 CA GLU 80 21.759 19.210 19.716 1.00 0.32 C ATOM 1251 C GLU 80 21.722 19.316 21.272 1.00 0.24 C ATOM 1252 O GLU 80 21.390 18.304 21.928 1.00 0.14 O ATOM 1253 CB GLU 80 20.310 18.968 19.168 1.00 0.28 C ATOM 1258 CG GLU 80 19.315 20.098 19.581 1.00 1.30 C ATOM 1261 CD GLU 80 17.906 19.914 18.976 1.00 1.30 C ATOM 1262 OE1 GLU 80 17.647 18.925 18.241 1.00 1.30 O ATOM 1263 OE2 GLU 80 17.008 20.760 19.225 1.00 1.30 O ATOM 1264 N ILE 81 21.978 20.486 21.808 1.00 0.39 N ATOM 1265 CA ILE 81 22.215 20.717 23.198 1.00 0.23 C ATOM 1266 C ILE 81 21.242 21.778 23.785 1.00 0.41 C ATOM 1267 O ILE 81 21.023 22.832 23.151 1.00 0.82 O ATOM 1268 CB ILE 81 23.696 21.232 23.338 1.00 0.39 C ATOM 1269 CG1 ILE 81 24.733 20.063 23.428 1.00 0.09 C ATOM 1270 CG2 ILE 81 23.953 22.495 24.231 1.00 1.19 C ATOM 1279 CD1 ILE 81 24.838 19.304 24.779 1.00 1.30 C ATOM 1283 N ASN 82 20.771 21.558 24.978 1.00 0.24 N ATOM 1284 CA ASN 82 19.846 22.449 25.584 1.00 0.26 C ATOM 1285 C ASN 82 20.406 23.847 26.036 1.00 0.38 C ATOM 1286 O ASN 82 20.453 24.123 27.258 1.00 1.22 O ATOM 1287 CB ASN 82 19.165 21.718 26.786 1.00 0.17 C ATOM 1288 CG ASN 82 17.958 22.509 27.339 1.00 0.12 C ATOM 1293 OD1 ASN 82 17.961 22.902 28.482 1.00 1.30 O ATOM 1294 ND2 ASN 82 16.867 22.775 26.528 1.00 1.30 N ATOM 1297 N GLY 83 20.740 24.711 25.117 1.00 0.58 N ATOM 1298 CA GLY 83 21.124 26.046 25.444 1.00 0.32 C ATOM 1299 C GLY 83 20.017 26.940 26.009 1.00 0.49 C ATOM 1300 O GLY 83 19.638 27.925 25.347 1.00 1.61 O ATOM 1304 N LYS 84 19.603 26.640 27.193 1.00 0.59 N ATOM 1305 CA LYS 84 18.918 27.600 27.969 1.00 0.84 C ATOM 1306 C LYS 84 19.937 28.125 28.996 1.00 0.79 C ATOM 1307 O LYS 84 20.153 29.356 28.995 1.00 1.32 O ATOM 1310 CB LYS 84 17.648 26.945 28.592 1.00 1.30 C ATOM 1313 CG LYS 84 16.520 26.801 27.517 1.00 1.30 C ATOM 1316 CD LYS 84 15.226 26.163 28.110 1.00 1.30 C ATOM 1319 CE LYS 84 14.056 26.231 27.083 1.00 1.30 C ATOM 1322 NZ LYS 84 12.805 25.569 27.665 1.00 1.30 N ATOM 1326 N SER 85 20.574 27.276 29.762 1.00 0.36 N ATOM 1327 CA SER 85 21.565 27.678 30.703 1.00 0.46 C ATOM 1328 C SER 85 22.852 28.236 30.018 1.00 1.13 C ATOM 1329 O SER 85 23.958 27.688 30.205 1.00 2.88 O ATOM 1330 CB SER 85 21.905 26.472 31.628 1.00 0.43 C ATOM 1335 OG SER 85 20.669 26.011 32.353 1.00 1.30 O ATOM 1337 N LEU 86 22.690 29.297 29.291 1.00 0.84 N ATOM 1338 CA LEU 86 23.588 29.715 28.287 1.00 0.51 C ATOM 1339 C LEU 86 23.152 31.139 27.977 1.00 0.95 C ATOM 1340 O LEU 86 23.983 32.071 28.024 1.00 1.34 O ATOM 1341 CB LEU 86 23.425 28.893 26.954 1.00 0.38 C ATOM 1342 CG LEU 86 24.270 29.445 25.746 1.00 0.76 C ATOM 1343 CD1 LEU 86 25.811 29.395 26.006 1.00 1.13 C ATOM 1344 CD2 LEU 86 23.931 28.647 24.447 1.00 2.13 C ATOM 1356 N LYS 87 21.894 31.286 27.705 1.00 1.09 N ATOM 1357 CA LYS 87 21.298 32.520 27.473 1.00 1.42 C ATOM 1358 C LYS 87 21.302 33.296 28.849 1.00 1.83 C ATOM 1359 O LYS 87 20.221 33.443 29.444 1.00 1.10 O ATOM 1360 CB LYS 87 19.888 32.201 26.851 1.00 1.38 C ATOM 1361 CG LYS 87 19.977 31.524 25.447 1.00 1.22 C ATOM 1368 CD LYS 87 18.550 31.144 24.944 1.00 1.30 C ATOM 1371 CE LYS 87 18.591 30.570 23.498 1.00 1.30 C ATOM 1374 NZ LYS 87 17.196 30.080 23.108 1.00 1.30 N ATOM 1378 N LYS 88 22.457 33.704 29.353 1.00 2.27 N ATOM 1379 CA LYS 88 22.670 33.846 30.760 1.00 0.95 C ATOM 1380 C LYS 88 23.876 34.797 31.055 1.00 1.46 C ATOM 1381 O LYS 88 23.633 35.834 31.698 1.00 0.97 O ATOM 1382 CB LYS 88 22.946 32.417 31.357 1.00 1.20 C ATOM 1383 CG LYS 88 23.444 32.325 32.839 1.00 0.65 C ATOM 1384 CD LYS 88 22.315 32.549 33.892 1.00 1.21 C ATOM 1393 CE LYS 88 22.808 32.215 35.337 1.00 1.30 C ATOM 1396 NZ LYS 88 23.096 30.718 35.496 1.00 1.30 N ATOM 1400 N TYR 89 25.099 34.463 30.680 1.00 7.63 N ATOM 1401 CA TYR 89 26.262 35.182 31.126 1.00 6.41 C ATOM 1402 C TYR 89 27.130 35.688 29.925 1.00 5.98 C ATOM 1403 O TYR 89 26.895 35.248 28.783 1.00 6.59 O ATOM 1404 CB TYR 89 26.998 34.392 32.282 1.00 5.49 C ATOM 1405 CG TYR 89 28.520 34.459 32.283 1.00 4.28 C ATOM 1406 CD1 TYR 89 29.208 35.216 33.248 1.00 3.34 C ATOM 1407 CD2 TYR 89 29.252 33.704 31.351 1.00 4.08 C ATOM 1408 CE1 TYR 89 30.609 35.207 33.285 1.00 2.22 C ATOM 1409 CE2 TYR 89 30.652 33.691 31.392 1.00 2.94 C ATOM 1410 CZ TYR 89 31.332 34.439 32.364 1.00 2.00 C ATOM 1419 OH TYR 89 32.636 34.412 32.415 1.00 1.30 H ATOM 1421 N MET 90 28.016 36.630 30.173 1.00 4.38 N ATOM 1422 CA MET 90 28.559 37.501 29.180 1.00 4.34 C ATOM 1423 C MET 90 27.427 38.200 28.398 1.00 4.13 C ATOM 1424 O MET 90 27.280 39.422 28.468 1.00 4.43 O ATOM 1425 CB MET 90 29.575 36.818 28.202 1.00 4.09 C ATOM 1426 CG MET 90 30.431 37.874 27.433 1.00 1.30 C ATOM 1433 SD MET 90 31.530 37.066 26.208 1.00 1.30 S ATOM 1434 CE MET 90 30.445 36.790 24.757 1.00 1.30 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 91.63 32.6 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 89.69 29.7 118 100.0 118 ARMSMC SURFACE . . . . . . . . 91.52 33.3 108 100.0 108 ARMSMC BURIED . . . . . . . . 91.80 31.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 95.38 34.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 94.63 36.4 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 95.14 36.5 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 93.29 34.1 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 98.26 35.5 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.52 54.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 65.38 54.3 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 64.02 56.4 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 73.22 51.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 57.93 59.1 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.47 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 68.47 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 51.22 58.8 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 68.53 50.0 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 68.29 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.71 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 90.71 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 96.06 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 92.94 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 77.31 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 14.34 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 14.34 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.1593 CRMSCA SECONDARY STRUCTURE . . 13.40 59 100.0 59 CRMSCA SURFACE . . . . . . . . 14.93 55 100.0 55 CRMSCA BURIED . . . . . . . . 13.35 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 14.38 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 13.45 293 100.0 293 CRMSMC SURFACE . . . . . . . . 14.97 269 100.0 269 CRMSMC BURIED . . . . . . . . 13.40 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 15.49 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 15.38 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 14.44 252 100.0 252 CRMSSC SURFACE . . . . . . . . 16.47 204 100.0 204 CRMSSC BURIED . . . . . . . . 14.07 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.91 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 13.95 488 100.0 488 CRMSALL SURFACE . . . . . . . . 15.68 424 100.0 424 CRMSALL BURIED . . . . . . . . 13.72 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.890 0.894 0.449 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 12.016 0.899 0.450 59 100.0 59 ERRCA SURFACE . . . . . . . . 13.488 0.896 0.451 55 100.0 55 ERRCA BURIED . . . . . . . . 11.950 0.891 0.445 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.796 0.878 0.442 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 11.933 0.884 0.442 293 100.0 293 ERRMC SURFACE . . . . . . . . 13.372 0.878 0.443 269 100.0 269 ERRMC BURIED . . . . . . . . 11.899 0.878 0.439 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.370 0.827 0.417 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 13.245 0.825 0.416 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 12.292 0.821 0.410 252 100.0 252 ERRSC SURFACE . . . . . . . . 14.425 0.839 0.426 204 100.0 204 ERRSC BURIED . . . . . . . . 11.955 0.811 0.406 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.067 0.853 0.430 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 12.121 0.852 0.426 488 100.0 488 ERRALL SURFACE . . . . . . . . 13.856 0.860 0.435 424 100.0 424 ERRALL BURIED . . . . . . . . 11.923 0.844 0.422 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 3 16 90 90 DISTCA CA (P) 0.00 0.00 1.11 3.33 17.78 90 DISTCA CA (RMS) 0.00 0.00 2.77 3.92 7.67 DISTCA ALL (N) 1 1 7 22 157 716 716 DISTALL ALL (P) 0.14 0.14 0.98 3.07 21.93 716 DISTALL ALL (RMS) 0.98 0.98 2.55 3.56 7.93 DISTALL END of the results output