####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS428_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS428_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.63 4.63 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 1.88 7.39 LCS_AVERAGE: 18.54 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 74 - 85 0.76 4.90 LONGEST_CONTINUOUS_SEGMENT: 12 75 - 86 0.87 4.91 LCS_AVERAGE: 8.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 90 3 3 4 6 8 8 13 18 20 24 24 50 55 56 69 71 72 75 81 84 LCS_GDT T 2 T 2 3 3 90 3 3 3 9 10 12 22 26 51 53 63 69 73 75 79 80 84 87 89 89 LCS_GDT D 3 D 3 4 22 90 3 4 7 14 17 36 46 59 62 67 72 74 75 79 81 84 87 88 89 89 LCS_GDT L 4 L 4 4 22 90 3 4 7 13 30 44 54 59 64 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 5 V 5 9 22 90 5 20 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 6 A 6 9 22 90 6 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 7 V 7 9 22 90 6 17 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT W 8 W 8 9 22 90 6 14 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT D 9 D 9 9 22 90 6 13 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 10 V 10 9 22 90 6 13 33 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 11 A 11 9 22 90 6 13 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT L 12 L 12 9 22 90 6 13 20 33 46 54 58 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT S 13 S 13 9 22 90 4 8 11 17 22 40 50 59 62 67 72 74 76 79 82 85 87 88 89 89 LCS_GDT D 14 D 14 10 22 90 3 17 29 41 48 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 15 G 15 10 22 90 6 13 29 41 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 16 V 16 10 22 90 6 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT H 17 H 17 10 22 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 18 K 18 10 22 90 6 19 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT I 19 I 19 10 22 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 20 E 20 10 22 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT F 21 F 21 10 22 90 9 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 22 E 22 10 22 90 6 15 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT H 23 H 23 10 22 90 4 13 21 42 48 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 24 G 24 9 22 90 3 8 19 28 47 50 55 62 66 68 71 74 77 80 82 85 87 88 89 89 LCS_GDT T 25 T 25 4 21 90 3 3 4 6 7 13 20 24 49 62 71 74 77 80 82 85 87 88 89 89 LCS_GDT T 26 T 26 4 4 90 3 4 4 4 5 5 7 17 25 35 53 69 75 80 82 85 87 88 89 89 LCS_GDT S 27 S 27 4 15 90 3 4 4 8 22 46 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 28 G 28 3 15 90 3 7 24 39 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 29 K 29 9 15 90 6 7 11 15 20 27 44 59 63 67 72 74 77 80 82 85 87 88 89 89 LCS_GDT R 30 R 30 9 15 90 6 7 11 15 20 34 50 60 65 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 31 V 31 9 15 90 6 7 11 16 34 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 32 V 32 9 15 90 6 7 15 36 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT Y 33 Y 33 9 15 90 6 15 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 34 V 34 9 15 90 6 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT D 35 D 35 9 15 90 5 16 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 36 G 36 9 15 90 5 18 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 37 K 37 9 15 90 9 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 38 E 38 8 15 90 9 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 39 E 39 8 15 90 6 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT I 40 I 40 8 15 90 3 9 29 41 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT R 41 R 41 7 15 90 3 7 29 41 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 42 K 42 4 15 90 3 4 7 29 44 52 58 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 43 E 43 4 4 90 3 4 4 4 5 7 11 20 26 40 57 67 73 80 82 85 87 88 89 89 LCS_GDT W 44 W 44 4 4 90 3 3 4 4 5 5 8 15 20 34 35 53 57 74 81 83 87 88 89 89 LCS_GDT M 45 M 45 4 6 90 3 3 6 6 7 13 29 47 54 66 70 74 77 80 82 85 87 88 89 89 LCS_GDT F 46 F 46 4 6 90 3 3 6 6 7 13 14 17 28 42 56 69 76 79 81 85 87 88 89 89 LCS_GDT K 47 K 47 4 6 90 3 4 6 6 7 8 21 36 40 49 61 71 76 79 81 85 87 88 89 89 LCS_GDT L 48 L 48 4 6 90 3 4 6 11 19 32 40 54 63 67 71 74 77 80 82 85 87 88 89 89 LCS_GDT V 49 V 49 4 7 90 3 4 6 6 13 25 40 53 63 66 71 74 77 80 82 85 87 88 89 89 LCS_GDT G 50 G 50 4 19 90 1 5 10 32 46 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 51 K 51 4 19 90 5 5 6 11 23 45 55 61 65 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 52 E 52 5 19 90 3 11 20 36 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT T 53 T 53 5 19 90 4 12 33 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT F 54 F 54 5 19 90 3 8 33 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT Y 55 Y 55 5 19 90 4 12 29 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT V 56 V 56 5 19 90 5 13 33 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 57 G 57 5 19 90 3 5 16 24 35 46 55 59 65 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 58 A 58 5 19 90 3 12 18 22 38 52 55 62 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 59 A 59 9 19 90 5 13 26 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 60 K 60 9 19 90 5 5 10 19 29 46 55 62 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT T 61 T 61 9 19 90 5 15 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 62 K 62 9 19 90 5 16 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 63 A 63 9 19 90 9 21 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT T 64 T 64 9 19 90 9 21 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT I 65 I 65 9 19 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT N 66 N 66 9 19 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT I 67 I 67 9 19 90 3 11 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT D 68 D 68 8 19 90 3 5 21 39 48 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 69 A 69 7 18 90 3 5 7 17 30 46 52 60 65 68 71 74 77 80 82 85 87 88 89 89 LCS_GDT I 70 I 70 7 15 90 3 5 11 17 22 32 46 59 63 67 71 74 77 80 82 85 87 88 89 89 LCS_GDT S 71 S 71 7 15 90 3 5 7 11 18 28 44 57 63 67 71 74 77 80 82 85 87 88 89 89 LCS_GDT G 72 G 72 7 15 90 3 5 8 18 28 38 50 60 63 67 71 74 77 80 82 85 87 88 89 89 LCS_GDT F 73 F 73 6 16 90 3 5 12 29 45 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT A 74 A 74 12 16 90 5 14 29 40 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT Y 75 Y 75 12 16 90 4 18 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 76 E 76 12 16 90 6 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT Y 77 Y 77 12 16 90 9 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT T 78 T 78 12 16 90 7 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT L 79 L 79 12 16 90 7 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT E 80 E 80 12 16 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT I 81 I 81 12 16 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT N 82 N 82 12 16 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT G 83 G 83 12 16 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 84 K 84 12 16 90 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT S 85 S 85 12 16 90 3 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT L 86 L 86 12 16 90 3 8 19 33 46 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 87 K 87 5 16 90 3 4 13 29 35 48 56 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT K 88 K 88 5 16 90 3 4 19 33 44 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 LCS_GDT Y 89 Y 89 3 14 90 3 3 7 7 7 25 42 47 55 62 67 71 74 76 78 83 87 88 89 89 LCS_GDT M 90 M 90 3 14 90 0 3 4 5 31 42 53 60 65 68 71 74 76 80 82 85 87 88 89 89 LCS_AVERAGE LCS_A: 42.40 ( 8.65 18.54 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 22 35 42 49 55 60 63 66 68 72 74 77 80 82 85 87 88 89 89 GDT PERCENT_AT 11.11 24.44 38.89 46.67 54.44 61.11 66.67 70.00 73.33 75.56 80.00 82.22 85.56 88.89 91.11 94.44 96.67 97.78 98.89 98.89 GDT RMS_LOCAL 0.33 0.69 1.03 1.20 1.50 1.69 1.94 2.11 2.27 2.39 2.73 2.84 3.21 3.47 3.62 3.95 4.15 4.24 4.37 4.37 GDT RMS_ALL_AT 5.28 4.91 4.91 5.02 4.87 4.86 4.80 4.79 4.82 4.83 4.88 4.89 4.68 4.69 4.68 4.68 4.66 4.66 4.64 4.64 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: D 68 D 68 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 14.646 0 0.398 0.975 16.366 0.119 0.060 LGA T 2 T 2 9.988 0 0.658 0.650 13.193 1.548 0.884 LGA D 3 D 3 7.104 0 0.494 0.472 8.068 11.310 10.357 LGA L 4 L 4 5.561 0 0.556 0.729 11.389 34.048 18.452 LGA V 5 V 5 1.378 0 0.649 1.004 6.250 81.786 57.551 LGA A 6 A 6 0.864 0 0.065 0.064 1.249 90.476 88.667 LGA V 7 V 7 1.264 0 0.026 0.050 1.692 79.286 77.755 LGA W 8 W 8 1.553 0 0.074 0.311 2.307 75.000 74.218 LGA D 9 D 9 1.625 0 0.131 0.256 2.352 75.000 73.988 LGA V 10 V 10 1.859 0 0.127 1.218 3.364 70.833 67.279 LGA A 11 A 11 1.861 0 0.055 0.057 2.640 66.905 68.095 LGA L 12 L 12 3.364 0 0.054 0.153 4.928 43.929 52.500 LGA S 13 S 13 5.809 0 0.405 0.491 7.959 26.429 20.000 LGA D 14 D 14 2.327 0 0.173 1.267 5.607 62.857 46.726 LGA G 15 G 15 2.263 0 0.098 0.098 2.263 70.952 70.952 LGA V 16 V 16 1.458 0 0.209 1.120 3.746 69.286 65.578 LGA H 17 H 17 0.913 0 0.212 0.557 3.223 88.214 75.190 LGA K 18 K 18 1.468 0 0.131 1.093 2.890 81.429 72.275 LGA I 19 I 19 1.009 0 0.044 0.486 1.861 85.952 84.881 LGA E 20 E 20 1.029 0 0.099 0.835 3.438 85.952 75.291 LGA F 21 F 21 1.287 0 0.087 0.238 3.261 79.286 67.489 LGA E 22 E 22 2.112 0 0.088 1.007 3.038 61.190 61.481 LGA H 23 H 23 3.008 0 0.658 1.299 7.031 55.357 37.190 LGA G 24 G 24 4.632 0 0.599 0.599 6.207 26.786 26.786 LGA T 25 T 25 8.619 0 0.059 0.064 12.016 5.595 3.197 LGA T 26 T 26 8.776 0 0.219 0.882 12.182 6.190 3.537 LGA S 27 S 27 3.808 0 0.524 0.496 5.098 36.071 37.460 LGA G 28 G 28 2.506 0 0.158 0.158 4.275 48.690 48.690 LGA K 29 K 29 6.231 0 0.299 1.558 14.955 27.976 13.016 LGA R 30 R 30 5.191 0 0.711 1.262 7.002 20.952 26.840 LGA V 31 V 31 3.775 0 0.148 0.759 4.950 52.143 46.667 LGA V 32 V 32 2.543 0 0.078 0.115 3.689 63.214 59.728 LGA Y 33 Y 33 1.127 0 0.082 0.370 4.143 83.810 66.786 LGA V 34 V 34 0.447 0 0.118 1.175 2.375 95.238 87.007 LGA D 35 D 35 1.004 0 0.044 0.968 4.048 88.214 73.214 LGA G 36 G 36 1.017 0 0.132 0.132 1.267 85.952 85.952 LGA K 37 K 37 0.913 0 0.108 1.156 6.070 83.810 68.624 LGA E 38 E 38 1.390 0 0.518 0.852 3.213 71.429 67.937 LGA E 39 E 39 1.483 0 0.205 1.354 4.983 79.286 65.926 LGA I 40 I 40 1.965 0 0.685 1.486 3.614 65.595 64.464 LGA R 41 R 41 2.012 0 0.594 1.361 4.734 64.762 54.632 LGA K 42 K 42 4.607 0 0.600 1.195 10.045 26.310 17.672 LGA E 43 E 43 10.253 0 0.090 1.241 16.755 1.190 0.529 LGA W 44 W 44 11.303 0 0.584 1.523 19.253 1.071 0.306 LGA M 45 M 45 7.385 0 0.665 1.106 8.837 6.190 14.524 LGA F 46 F 46 10.903 0 0.072 1.204 14.238 0.119 0.043 LGA K 47 K 47 10.509 0 0.527 1.168 10.509 1.071 0.476 LGA L 48 L 48 7.878 0 0.078 1.445 9.992 9.286 4.881 LGA V 49 V 49 8.030 0 0.639 1.442 11.283 15.595 8.980 LGA G 50 G 50 3.176 0 0.656 0.656 5.067 34.881 34.881 LGA K 51 K 51 4.818 0 0.656 1.011 8.147 42.143 27.037 LGA E 52 E 52 2.973 0 0.248 0.434 4.682 51.905 43.757 LGA T 53 T 53 2.140 0 0.040 0.072 2.267 64.762 68.231 LGA F 54 F 54 2.485 0 0.101 1.128 3.701 64.762 67.186 LGA Y 55 Y 55 2.699 0 0.086 0.223 3.551 57.143 51.825 LGA V 56 V 56 2.495 0 0.618 0.621 4.583 50.833 61.633 LGA G 57 G 57 5.372 0 0.544 0.544 5.372 32.976 32.976 LGA A 58 A 58 4.482 0 0.638 0.608 5.203 34.524 35.048 LGA A 59 A 59 2.754 0 0.126 0.127 3.347 51.786 56.000 LGA K 60 K 60 4.657 0 0.097 1.032 14.456 40.476 20.688 LGA T 61 T 61 1.604 0 0.099 1.090 3.529 72.976 69.932 LGA K 62 K 62 1.465 0 0.154 0.831 2.550 81.548 75.979 LGA A 63 A 63 0.912 0 0.137 0.152 1.445 83.690 85.048 LGA T 64 T 64 1.086 0 0.153 1.122 4.029 85.952 76.463 LGA I 65 I 65 0.996 0 0.653 0.746 3.852 72.024 81.250 LGA N 66 N 66 0.776 0 0.608 0.635 2.000 84.048 82.798 LGA I 67 I 67 1.765 0 0.072 0.152 4.492 65.119 57.738 LGA D 68 D 68 3.093 0 0.061 1.195 6.634 50.357 38.810 LGA A 69 A 69 6.007 0 0.680 0.637 8.731 15.357 14.286 LGA I 70 I 70 8.215 0 0.175 1.430 12.554 11.667 6.310 LGA S 71 S 71 9.657 0 0.222 0.693 10.339 0.595 0.476 LGA G 72 G 72 8.290 0 0.343 0.343 8.384 9.048 9.048 LGA F 73 F 73 3.576 0 0.544 1.026 8.160 57.262 32.727 LGA A 74 A 74 2.268 0 0.215 0.297 4.425 64.881 59.333 LGA Y 75 Y 75 0.973 0 0.165 1.548 9.678 90.476 48.651 LGA E 76 E 76 0.852 0 0.149 1.121 3.358 85.952 74.444 LGA Y 77 Y 77 0.693 0 0.055 1.050 7.999 92.857 56.071 LGA T 78 T 78 1.017 0 0.026 0.049 1.561 88.214 82.857 LGA L 79 L 79 0.800 0 0.083 0.973 2.386 90.476 82.917 LGA E 80 E 80 0.717 0 0.094 0.773 3.064 90.476 74.074 LGA I 81 I 81 1.019 0 0.025 0.998 2.163 83.690 77.321 LGA N 82 N 82 1.408 0 0.034 0.118 2.069 79.286 75.060 LGA G 83 G 83 1.096 0 0.139 0.139 1.793 79.286 79.286 LGA K 84 K 84 1.168 0 0.111 0.823 3.935 85.952 68.836 LGA S 85 S 85 0.584 0 0.257 0.649 1.583 88.214 84.524 LGA L 86 L 86 2.980 0 0.035 1.250 8.125 65.000 43.155 LGA K 87 K 87 4.634 0 0.062 1.020 10.252 34.286 19.153 LGA K 88 K 88 3.455 0 0.063 1.130 7.885 32.024 33.810 LGA Y 89 Y 89 8.404 0 0.368 1.281 14.547 11.310 3.770 LGA M 90 M 90 6.252 0 0.657 0.853 9.643 10.357 10.655 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.631 4.542 5.734 53.914 47.986 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 63 2.11 58.889 51.639 2.844 LGA_LOCAL RMSD: 2.115 Number of atoms: 63 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.787 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.631 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.207592 * X + 0.957504 * Y + 0.200227 * Z + -6.424319 Y_new = 0.365157 * X + -0.114039 * Y + 0.923935 * Z + -41.172562 Z_new = 0.907505 * X + 0.264916 * Y + -0.325966 * Z + -43.997517 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.087732 -1.137306 2.459150 [DEG: 119.6182 -65.1628 140.8989 ] ZXZ: 2.928182 1.902830 1.286772 [DEG: 167.7725 109.0241 73.7266 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS428_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS428_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 63 2.11 51.639 4.63 REMARK ---------------------------------------------------------- MOLECULE T0540TS428_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 23.736 9.307 3.122 1.00 0.00 N ATOM 2 CA MET 1 24.389 8.105 3.695 1.00 0.00 C ATOM 3 CB MET 1 24.458 6.990 2.644 1.00 0.00 C ATOM 4 CG MET 1 25.352 7.328 1.454 1.00 0.00 C ATOM 5 SD MET 1 25.422 6.015 0.200 1.00 0.00 S ATOM 6 CE MET 1 26.306 4.838 1.261 1.00 0.00 C ATOM 7 C MET 1 25.770 8.431 4.156 1.00 0.00 C ATOM 8 O MET 1 26.414 7.633 4.838 1.00 0.00 O ATOM 9 N THR 2 26.262 9.626 3.785 1.00 0.00 N ATOM 10 CA THR 2 27.546 10.046 4.255 1.00 0.00 C ATOM 11 CB THR 2 28.322 10.841 3.236 1.00 0.00 C ATOM 12 OG1 THR 2 27.633 12.031 2.876 1.00 0.00 O ATOM 13 CG2 THR 2 28.505 9.961 1.989 1.00 0.00 C ATOM 14 C THR 2 27.235 10.901 5.422 1.00 0.00 C ATOM 15 O THR 2 26.644 11.967 5.252 1.00 0.00 O ATOM 16 N ASP 3 27.589 10.414 6.636 1.00 0.00 N ATOM 17 CA ASP 3 27.260 11.149 7.818 1.00 0.00 C ATOM 18 CB ASP 3 27.938 10.545 9.056 1.00 0.00 C ATOM 19 CG ASP 3 27.489 9.096 9.186 1.00 0.00 C ATOM 20 OD1 ASP 3 26.348 8.780 8.755 1.00 0.00 O ATOM 21 OD2 ASP 3 28.299 8.282 9.704 1.00 0.00 O ATOM 22 C ASP 3 27.877 12.484 7.593 1.00 0.00 C ATOM 23 O ASP 3 27.178 13.464 7.360 1.00 0.00 O ATOM 24 N LEU 4 29.205 12.580 7.722 1.00 0.00 N ATOM 25 CA LEU 4 29.939 13.691 7.198 1.00 0.00 C ATOM 26 CB LEU 4 30.570 14.749 8.110 1.00 0.00 C ATOM 27 CG LEU 4 29.551 15.839 8.482 1.00 0.00 C ATOM 28 CD1 LEU 4 28.599 15.394 9.600 1.00 0.00 C ATOM 29 CD2 LEU 4 30.247 17.189 8.695 1.00 0.00 C ATOM 30 C LEU 4 30.755 13.467 5.960 1.00 0.00 C ATOM 31 O LEU 4 31.562 14.340 5.648 1.00 0.00 O ATOM 32 N VAL 5 30.757 12.275 5.326 1.00 0.00 N ATOM 33 CA VAL 5 31.653 12.109 4.199 1.00 0.00 C ATOM 34 CB VAL 5 31.506 10.787 3.496 1.00 0.00 C ATOM 35 CG1 VAL 5 32.409 10.786 2.251 1.00 0.00 C ATOM 36 CG2 VAL 5 31.822 9.658 4.491 1.00 0.00 C ATOM 37 C VAL 5 31.412 13.186 3.178 1.00 0.00 C ATOM 38 O VAL 5 30.279 13.434 2.771 1.00 0.00 O ATOM 39 N ALA 6 32.497 13.869 2.743 1.00 0.00 N ATOM 40 CA ALA 6 32.360 14.920 1.772 1.00 0.00 C ATOM 41 CB ALA 6 32.436 16.331 2.382 1.00 0.00 C ATOM 42 C ALA 6 33.461 14.797 0.758 1.00 0.00 C ATOM 43 O ALA 6 34.549 14.308 1.066 1.00 0.00 O ATOM 44 N VAL 7 33.183 15.215 -0.497 1.00 0.00 N ATOM 45 CA VAL 7 34.171 15.118 -1.537 1.00 0.00 C ATOM 46 CB VAL 7 34.087 13.829 -2.300 1.00 0.00 C ATOM 47 CG1 VAL 7 35.152 13.844 -3.407 1.00 0.00 C ATOM 48 CG2 VAL 7 34.249 12.664 -1.307 1.00 0.00 C ATOM 49 C VAL 7 33.958 16.243 -2.510 1.00 0.00 C ATOM 50 O VAL 7 32.821 16.550 -2.871 1.00 0.00 O ATOM 51 N TRP 8 35.061 16.895 -2.949 1.00 0.00 N ATOM 52 CA TRP 8 34.987 17.981 -3.892 1.00 0.00 C ATOM 53 CB TRP 8 35.136 19.352 -3.221 1.00 0.00 C ATOM 54 CG TRP 8 34.176 19.547 -2.080 1.00 0.00 C ATOM 55 CD2 TRP 8 34.474 19.113 -0.748 1.00 0.00 C ATOM 56 CD1 TRP 8 32.937 20.113 -2.041 1.00 0.00 C ATOM 57 NE1 TRP 8 32.441 20.057 -0.758 1.00 0.00 N ATOM 58 CE2 TRP 8 33.380 19.445 0.048 1.00 0.00 C ATOM 59 CE3 TRP 8 35.572 18.487 -0.232 1.00 0.00 C ATOM 60 CZ2 TRP 8 33.370 19.159 1.381 1.00 0.00 C ATOM 61 CZ3 TRP 8 35.561 18.200 1.114 1.00 0.00 C ATOM 62 CH2 TRP 8 34.480 18.531 1.903 1.00 0.00 H ATOM 63 C TRP 8 36.201 17.837 -4.751 1.00 0.00 C ATOM 64 O TRP 8 37.318 17.915 -4.241 1.00 0.00 O ATOM 65 N ASP 9 36.031 17.691 -6.078 1.00 0.00 N ATOM 66 CA ASP 9 37.175 17.374 -6.888 1.00 0.00 C ATOM 67 CB ASP 9 36.857 16.263 -7.903 1.00 0.00 C ATOM 68 CG ASP 9 36.477 15.023 -7.099 1.00 0.00 C ATOM 69 OD1 ASP 9 36.896 14.946 -5.913 1.00 0.00 O ATOM 70 OD2 ASP 9 35.759 14.146 -7.648 1.00 0.00 O ATOM 71 C ASP 9 37.635 18.584 -7.643 1.00 0.00 C ATOM 72 O ASP 9 37.045 18.954 -8.659 1.00 0.00 O ATOM 73 N VAL 10 38.742 19.210 -7.189 1.00 0.00 N ATOM 74 CA VAL 10 39.217 20.411 -7.819 1.00 0.00 C ATOM 75 CB VAL 10 39.563 21.491 -6.832 1.00 0.00 C ATOM 76 CG1 VAL 10 40.743 21.008 -5.970 1.00 0.00 C ATOM 77 CG2 VAL 10 39.854 22.792 -7.598 1.00 0.00 C ATOM 78 C VAL 10 40.454 20.116 -8.606 1.00 0.00 C ATOM 79 O VAL 10 41.317 19.349 -8.180 1.00 0.00 O ATOM 80 N ALA 11 40.571 20.733 -9.801 1.00 0.00 N ATOM 81 CA ALA 11 41.738 20.513 -10.598 1.00 0.00 C ATOM 82 CB ALA 11 41.497 20.695 -12.107 1.00 0.00 C ATOM 83 C ALA 11 42.755 21.524 -10.182 1.00 0.00 C ATOM 84 O ALA 11 42.561 22.729 -10.354 1.00 0.00 O ATOM 85 N LEU 12 43.867 21.041 -9.596 1.00 0.00 N ATOM 86 CA LEU 12 44.946 21.894 -9.194 1.00 0.00 C ATOM 87 CB LEU 12 44.971 22.241 -7.695 1.00 0.00 C ATOM 88 CG LEU 12 43.855 23.196 -7.238 1.00 0.00 C ATOM 89 CD1 LEU 12 44.006 23.534 -5.745 1.00 0.00 C ATOM 90 CD2 LEU 12 43.784 24.447 -8.132 1.00 0.00 C ATOM 91 C LEU 12 46.221 21.178 -9.486 1.00 0.00 C ATOM 92 O LEU 12 46.256 19.953 -9.597 1.00 0.00 O ATOM 93 N SER 13 47.308 21.961 -9.613 1.00 0.00 N ATOM 94 CA SER 13 48.621 21.467 -9.888 1.00 0.00 C ATOM 95 CB SER 13 49.262 20.706 -8.713 1.00 0.00 C ATOM 96 OG SER 13 48.548 19.510 -8.446 1.00 0.00 O ATOM 97 C SER 13 48.603 20.595 -11.106 1.00 0.00 C ATOM 98 O SER 13 49.185 19.515 -11.111 1.00 0.00 O ATOM 99 N ASP 14 47.919 21.056 -12.175 1.00 0.00 N ATOM 100 CA ASP 14 47.915 20.365 -13.433 1.00 0.00 C ATOM 101 CB ASP 14 49.262 20.434 -14.164 1.00 0.00 C ATOM 102 CG ASP 14 49.415 21.861 -14.657 1.00 0.00 C ATOM 103 OD1 ASP 14 48.534 22.308 -15.441 1.00 0.00 O ATOM 104 OD2 ASP 14 50.410 22.520 -14.259 1.00 0.00 O ATOM 105 C ASP 14 47.562 18.932 -13.238 1.00 0.00 C ATOM 106 O ASP 14 48.179 18.042 -13.823 1.00 0.00 O ATOM 107 N GLY 15 46.541 18.676 -12.409 1.00 0.00 N ATOM 108 CA GLY 15 46.088 17.337 -12.189 1.00 0.00 C ATOM 109 C GLY 15 44.731 17.491 -11.598 1.00 0.00 C ATOM 110 O GLY 15 44.291 18.611 -11.352 1.00 0.00 O ATOM 111 N VAL 16 44.011 16.377 -11.373 1.00 0.00 N ATOM 112 CA VAL 16 42.730 16.550 -10.764 1.00 0.00 C ATOM 113 CB VAL 16 41.626 15.801 -11.473 1.00 0.00 C ATOM 114 CG1 VAL 16 41.904 14.287 -11.470 1.00 0.00 C ATOM 115 CG2 VAL 16 40.291 16.204 -10.834 1.00 0.00 C ATOM 116 C VAL 16 42.846 16.120 -9.331 1.00 0.00 C ATOM 117 O VAL 16 42.885 14.934 -9.008 1.00 0.00 O ATOM 118 N HIS 17 42.896 17.101 -8.409 1.00 0.00 N ATOM 119 CA HIS 17 43.051 16.755 -7.030 1.00 0.00 C ATOM 120 ND1 HIS 17 45.924 19.010 -5.732 1.00 0.00 N ATOM 121 CG HIS 17 45.209 17.958 -6.261 1.00 0.00 C ATOM 122 CB HIS 17 43.717 17.842 -6.162 1.00 0.00 C ATOM 123 NE2 HIS 17 47.411 17.618 -6.620 1.00 0.00 N ATOM 124 CD2 HIS 17 46.134 17.117 -6.801 1.00 0.00 C ATOM 125 CE1 HIS 17 47.234 18.756 -5.974 1.00 0.00 C ATOM 126 C HIS 17 41.700 16.585 -6.441 1.00 0.00 C ATOM 127 O HIS 17 40.999 17.562 -6.181 1.00 0.00 O ATOM 128 N LYS 18 41.296 15.326 -6.222 1.00 0.00 N ATOM 129 CA LYS 18 40.070 15.124 -5.528 1.00 0.00 C ATOM 130 CB LYS 18 39.593 13.664 -5.529 1.00 0.00 C ATOM 131 CG LYS 18 39.175 13.156 -6.910 1.00 0.00 C ATOM 132 CD LYS 18 39.008 11.637 -6.977 1.00 0.00 C ATOM 133 CE LYS 18 38.388 11.034 -5.715 1.00 0.00 C ATOM 134 NZ LYS 18 37.232 11.847 -5.279 1.00 0.00 N ATOM 135 C LYS 18 40.380 15.486 -4.119 1.00 0.00 C ATOM 136 O LYS 18 41.521 15.350 -3.678 1.00 0.00 O ATOM 137 N ILE 19 39.381 16.017 -3.395 1.00 0.00 N ATOM 138 CA ILE 19 39.575 16.312 -2.011 1.00 0.00 C ATOM 139 CB ILE 19 39.412 17.763 -1.646 1.00 0.00 C ATOM 140 CG2 ILE 19 39.340 17.843 -0.115 1.00 0.00 C ATOM 141 CG1 ILE 19 40.527 18.626 -2.258 1.00 0.00 C ATOM 142 CD1 ILE 19 40.421 18.749 -3.775 1.00 0.00 C ATOM 143 C ILE 19 38.507 15.574 -1.284 1.00 0.00 C ATOM 144 O ILE 19 37.361 15.524 -1.726 1.00 0.00 O ATOM 145 N GLU 20 38.870 14.949 -0.151 1.00 0.00 N ATOM 146 CA GLU 20 37.891 14.245 0.616 1.00 0.00 C ATOM 147 CB GLU 20 38.140 12.733 0.749 1.00 0.00 C ATOM 148 CG GLU 20 37.757 11.932 -0.498 1.00 0.00 C ATOM 149 CD GLU 20 38.823 12.139 -1.563 1.00 0.00 C ATOM 150 OE1 GLU 20 40.020 12.259 -1.190 1.00 0.00 O ATOM 151 OE2 GLU 20 38.455 12.179 -2.767 1.00 0.00 O ATOM 152 C GLU 20 37.903 14.818 1.993 1.00 0.00 C ATOM 153 O GLU 20 38.827 15.529 2.385 1.00 0.00 O ATOM 154 N PHE 21 36.810 14.553 2.729 1.00 0.00 N ATOM 155 CA PHE 21 36.606 14.964 4.085 1.00 0.00 C ATOM 156 CB PHE 21 35.549 16.081 4.141 1.00 0.00 C ATOM 157 CG PHE 21 35.085 16.390 5.521 1.00 0.00 C ATOM 158 CD1 PHE 21 35.852 17.152 6.367 1.00 0.00 C ATOM 159 CD2 PHE 21 33.854 15.938 5.944 1.00 0.00 C ATOM 160 CE1 PHE 21 35.402 17.450 7.629 1.00 0.00 C ATOM 161 CE2 PHE 21 33.394 16.230 7.202 1.00 0.00 C ATOM 162 CZ PHE 21 34.173 16.991 8.035 1.00 0.00 C ATOM 163 C PHE 21 36.058 13.757 4.772 1.00 0.00 C ATOM 164 O PHE 21 35.144 13.117 4.254 1.00 0.00 O ATOM 165 N GLU 22 36.609 13.405 5.951 1.00 0.00 N ATOM 166 CA GLU 22 36.173 12.231 6.650 1.00 0.00 C ATOM 167 CB GLU 22 37.332 11.239 6.865 1.00 0.00 C ATOM 168 CG GLU 22 36.909 9.825 7.270 1.00 0.00 C ATOM 169 CD GLU 22 36.851 9.750 8.789 1.00 0.00 C ATOM 170 OE1 GLU 22 37.386 10.680 9.448 1.00 0.00 O ATOM 171 OE2 GLU 22 36.276 8.757 9.310 1.00 0.00 O ATOM 172 C GLU 22 35.674 12.686 7.988 1.00 0.00 C ATOM 173 O GLU 22 36.422 13.230 8.797 1.00 0.00 O ATOM 174 N HIS 23 34.367 12.476 8.229 1.00 0.00 N ATOM 175 CA HIS 23 33.643 12.871 9.403 1.00 0.00 C ATOM 176 ND1 HIS 23 30.952 12.021 11.435 1.00 0.00 N ATOM 177 CG HIS 23 31.398 12.960 10.532 1.00 0.00 C ATOM 178 CB HIS 23 32.148 12.608 9.279 1.00 0.00 C ATOM 179 NE2 HIS 23 30.378 14.006 12.254 1.00 0.00 N ATOM 180 CD2 HIS 23 31.040 14.168 11.047 1.00 0.00 C ATOM 181 CE1 HIS 23 30.351 12.700 12.444 1.00 0.00 C ATOM 182 C HIS 23 33.984 12.103 10.629 1.00 0.00 C ATOM 183 O HIS 23 33.916 12.668 11.718 1.00 0.00 O ATOM 184 N GLY 24 34.330 10.807 10.491 1.00 0.00 N ATOM 185 CA GLY 24 34.420 9.948 11.642 1.00 0.00 C ATOM 186 C GLY 24 35.318 10.555 12.679 1.00 0.00 C ATOM 187 O GLY 24 35.010 10.501 13.869 1.00 0.00 O ATOM 188 N THR 25 36.484 11.072 12.261 1.00 0.00 N ATOM 189 CA THR 25 37.415 11.757 13.121 1.00 0.00 C ATOM 190 CB THR 25 38.832 11.531 12.696 1.00 0.00 C ATOM 191 OG1 THR 25 39.041 12.033 11.384 1.00 0.00 O ATOM 192 CG2 THR 25 39.105 10.017 12.743 1.00 0.00 C ATOM 193 C THR 25 37.201 13.254 13.231 1.00 0.00 C ATOM 194 O THR 25 37.607 13.873 14.212 1.00 0.00 O ATOM 195 N THR 26 36.563 13.866 12.218 1.00 0.00 N ATOM 196 CA THR 26 36.584 15.282 11.928 1.00 0.00 C ATOM 197 CB THR 26 36.129 15.581 10.545 1.00 0.00 C ATOM 198 OG1 THR 26 36.618 16.849 10.137 1.00 0.00 O ATOM 199 CG2 THR 26 34.604 15.582 10.570 1.00 0.00 C ATOM 200 C THR 26 35.917 16.250 12.873 1.00 0.00 C ATOM 201 O THR 26 36.083 17.447 12.657 1.00 0.00 O ATOM 202 N SER 27 35.021 15.847 13.795 1.00 0.00 N ATOM 203 CA SER 27 34.566 16.764 14.818 1.00 0.00 C ATOM 204 CB SER 27 35.668 17.305 15.765 1.00 0.00 C ATOM 205 OG SER 27 36.588 18.143 15.081 1.00 0.00 O ATOM 206 C SER 27 33.726 17.902 14.304 1.00 0.00 C ATOM 207 O SER 27 32.715 17.708 13.635 1.00 0.00 O ATOM 208 N GLY 28 34.117 19.124 14.728 1.00 0.00 N ATOM 209 CA GLY 28 33.503 20.417 14.599 1.00 0.00 C ATOM 210 C GLY 28 33.431 21.022 13.228 1.00 0.00 C ATOM 211 O GLY 28 32.568 21.871 13.017 1.00 0.00 O ATOM 212 N LYS 29 34.343 20.700 12.291 1.00 0.00 N ATOM 213 CA LYS 29 34.383 21.492 11.095 1.00 0.00 C ATOM 214 CB LYS 29 35.456 22.597 11.144 1.00 0.00 C ATOM 215 CG LYS 29 34.899 23.962 11.564 1.00 0.00 C ATOM 216 CD LYS 29 34.266 24.028 12.950 1.00 0.00 C ATOM 217 CE LYS 29 33.437 25.297 13.165 1.00 0.00 C ATOM 218 NZ LYS 29 32.546 25.130 14.335 1.00 0.00 N ATOM 219 C LYS 29 34.521 20.763 9.780 1.00 0.00 C ATOM 220 O LYS 29 33.860 19.767 9.482 1.00 0.00 O ATOM 221 N ARG 30 35.245 21.477 8.901 1.00 0.00 N ATOM 222 CA ARG 30 35.444 21.396 7.475 1.00 0.00 C ATOM 223 CB ARG 30 35.441 22.801 6.861 1.00 0.00 C ATOM 224 CG ARG 30 34.078 23.511 6.865 1.00 0.00 C ATOM 225 CD ARG 30 33.547 23.954 8.237 1.00 0.00 C ATOM 226 NE ARG 30 32.458 24.943 7.969 1.00 0.00 N ATOM 227 CZ ARG 30 31.522 25.281 8.907 1.00 0.00 C ATOM 228 NH1 ARG 30 31.523 24.700 10.143 1.00 0.00 H ATOM 229 NH2 ARG 30 30.575 26.217 8.603 1.00 0.00 H ATOM 230 C ARG 30 36.514 20.602 6.740 1.00 0.00 C ATOM 231 O ARG 30 36.380 20.500 5.525 1.00 0.00 O ATOM 232 N VAL 31 37.595 20.083 7.343 1.00 0.00 N ATOM 233 CA VAL 31 38.811 19.682 6.643 1.00 0.00 C ATOM 234 CB VAL 31 39.758 18.862 7.461 1.00 0.00 C ATOM 235 CG1 VAL 31 40.519 19.795 8.401 1.00 0.00 C ATOM 236 CG2 VAL 31 38.955 17.788 8.207 1.00 0.00 C ATOM 237 C VAL 31 38.807 19.072 5.270 1.00 0.00 C ATOM 238 O VAL 31 38.231 18.024 4.985 1.00 0.00 O ATOM 239 N VAL 32 39.586 19.754 4.390 1.00 0.00 N ATOM 240 CA VAL 32 39.964 19.328 3.067 1.00 0.00 C ATOM 241 CB VAL 32 40.462 20.453 2.199 1.00 0.00 C ATOM 242 CG1 VAL 32 41.171 19.874 0.968 1.00 0.00 C ATOM 243 CG2 VAL 32 39.316 21.408 1.845 1.00 0.00 C ATOM 244 C VAL 32 41.154 18.434 3.225 1.00 0.00 C ATOM 245 O VAL 32 42.037 18.695 4.043 1.00 0.00 O ATOM 246 N TYR 33 41.178 17.328 2.456 1.00 0.00 N ATOM 247 CA TYR 33 42.334 16.480 2.384 1.00 0.00 C ATOM 248 CB TYR 33 42.077 15.010 2.793 1.00 0.00 C ATOM 249 CG TYR 33 41.450 14.987 4.153 1.00 0.00 C ATOM 250 CD1 TYR 33 42.051 15.597 5.231 1.00 0.00 C ATOM 251 CD2 TYR 33 40.270 14.306 4.359 1.00 0.00 C ATOM 252 CE1 TYR 33 41.461 15.561 6.473 1.00 0.00 C ATOM 253 CE2 TYR 33 39.676 14.265 5.600 1.00 0.00 C ATOM 254 CZ TYR 33 40.267 14.906 6.659 1.00 0.00 C ATOM 255 OH TYR 33 39.663 14.874 7.935 1.00 0.00 H ATOM 256 C TYR 33 42.686 16.505 0.927 1.00 0.00 C ATOM 257 O TYR 33 41.852 16.149 0.093 1.00 0.00 O ATOM 258 N VAL 34 43.918 16.938 0.572 1.00 0.00 N ATOM 259 CA VAL 34 44.232 17.066 -0.829 1.00 0.00 C ATOM 260 CB VAL 34 44.534 18.465 -1.292 1.00 0.00 C ATOM 261 CG1 VAL 34 43.359 19.383 -0.946 1.00 0.00 C ATOM 262 CG2 VAL 34 45.881 18.915 -0.709 1.00 0.00 C ATOM 263 C VAL 34 45.472 16.301 -1.165 1.00 0.00 C ATOM 264 O VAL 34 46.324 16.032 -0.322 1.00 0.00 O ATOM 265 N ASP 35 45.578 15.934 -2.457 1.00 0.00 N ATOM 266 CA ASP 35 46.729 15.288 -3.020 1.00 0.00 C ATOM 267 CB ASP 35 47.945 16.226 -3.124 1.00 0.00 C ATOM 268 CG ASP 35 48.976 15.630 -4.073 1.00 0.00 C ATOM 269 OD1 ASP 35 48.960 14.389 -4.297 1.00 0.00 O ATOM 270 OD2 ASP 35 49.797 16.429 -4.597 1.00 0.00 O ATOM 271 C ASP 35 47.096 14.090 -2.198 1.00 0.00 C ATOM 272 O ASP 35 48.269 13.852 -1.913 1.00 0.00 O ATOM 273 N GLY 36 46.087 13.310 -1.775 1.00 0.00 N ATOM 274 CA GLY 36 46.343 12.084 -1.076 1.00 0.00 C ATOM 275 C GLY 36 46.974 12.372 0.249 1.00 0.00 C ATOM 276 O GLY 36 47.630 11.503 0.819 1.00 0.00 O ATOM 277 N LYS 37 46.800 13.596 0.782 1.00 0.00 N ATOM 278 CA LYS 37 47.406 13.898 2.048 1.00 0.00 C ATOM 279 CB LYS 37 48.566 14.893 1.946 1.00 0.00 C ATOM 280 CG LYS 37 49.708 14.433 1.044 1.00 0.00 C ATOM 281 CD LYS 37 50.662 15.576 0.693 1.00 0.00 C ATOM 282 CE LYS 37 51.627 15.248 -0.442 1.00 0.00 C ATOM 283 NZ LYS 37 50.851 14.904 -1.649 1.00 0.00 N ATOM 284 C LYS 37 46.367 14.556 2.914 1.00 0.00 C ATOM 285 O LYS 37 45.411 15.152 2.427 1.00 0.00 O ATOM 286 N GLU 38 46.570 14.453 4.239 1.00 0.00 N ATOM 287 CA GLU 38 45.759 14.919 5.336 1.00 0.00 C ATOM 288 CB GLU 38 46.008 14.187 6.674 1.00 0.00 C ATOM 289 CG GLU 38 44.868 14.410 7.680 1.00 0.00 C ATOM 290 CD GLU 38 45.116 13.593 8.944 1.00 0.00 C ATOM 291 OE1 GLU 38 46.280 13.161 9.152 1.00 0.00 O ATOM 292 OE2 GLU 38 44.143 13.392 9.720 1.00 0.00 O ATOM 293 C GLU 38 45.906 16.403 5.582 1.00 0.00 C ATOM 294 O GLU 38 45.514 16.877 6.645 1.00 0.00 O ATOM 295 N GLU 39 46.473 17.171 4.626 1.00 0.00 N ATOM 296 CA GLU 39 47.144 18.436 4.847 1.00 0.00 C ATOM 297 CB GLU 39 47.369 19.247 3.556 1.00 0.00 C ATOM 298 CG GLU 39 48.483 18.740 2.642 1.00 0.00 C ATOM 299 CD GLU 39 47.857 17.873 1.566 1.00 0.00 C ATOM 300 OE1 GLU 39 46.710 17.405 1.788 1.00 0.00 O ATOM 301 OE2 GLU 39 48.512 17.671 0.509 1.00 0.00 O ATOM 302 C GLU 39 46.609 19.483 5.804 1.00 0.00 C ATOM 303 O GLU 39 47.220 19.686 6.851 1.00 0.00 O ATOM 304 N ILE 40 45.481 20.152 5.524 1.00 0.00 N ATOM 305 CA ILE 40 45.032 21.341 6.227 1.00 0.00 C ATOM 306 CB ILE 40 43.901 22.061 5.584 1.00 0.00 C ATOM 307 CG2 ILE 40 42.616 21.342 6.025 1.00 0.00 C ATOM 308 CG1 ILE 40 43.902 23.536 6.013 1.00 0.00 C ATOM 309 CD1 ILE 40 45.131 24.315 5.544 1.00 0.00 C ATOM 310 C ILE 40 44.581 21.134 7.641 1.00 0.00 C ATOM 311 O ILE 40 44.278 22.109 8.327 1.00 0.00 O ATOM 312 N ARG 41 44.417 19.884 8.094 1.00 0.00 N ATOM 313 CA ARG 41 43.666 19.564 9.278 1.00 0.00 C ATOM 314 CB ARG 41 43.926 18.128 9.754 1.00 0.00 C ATOM 315 CG ARG 41 43.385 17.085 8.785 1.00 0.00 C ATOM 316 CD ARG 41 42.014 16.552 9.192 1.00 0.00 C ATOM 317 NE ARG 41 42.241 15.551 10.267 1.00 0.00 N ATOM 318 CZ ARG 41 41.198 15.032 10.974 1.00 0.00 C ATOM 319 NH1 ARG 41 39.926 15.484 10.777 1.00 0.00 H ATOM 320 NH2 ARG 41 41.446 14.042 11.879 1.00 0.00 H ATOM 321 C ARG 41 43.915 20.432 10.484 1.00 0.00 C ATOM 322 O ARG 41 42.942 20.925 11.056 1.00 0.00 O ATOM 323 N LYS 42 45.170 20.647 10.922 1.00 0.00 N ATOM 324 CA LYS 42 45.407 21.353 12.161 1.00 0.00 C ATOM 325 CB LYS 42 46.911 21.412 12.497 1.00 0.00 C ATOM 326 CG LYS 42 47.277 22.276 13.709 1.00 0.00 C ATOM 327 CD LYS 42 46.867 21.704 15.067 1.00 0.00 C ATOM 328 CE LYS 42 47.409 22.518 16.246 1.00 0.00 C ATOM 329 NZ LYS 42 48.867 22.303 16.396 1.00 0.00 N ATOM 330 C LYS 42 44.918 22.774 12.158 1.00 0.00 C ATOM 331 O LYS 42 44.097 23.150 12.995 1.00 0.00 O ATOM 332 N GLU 43 45.377 23.600 11.196 1.00 0.00 N ATOM 333 CA GLU 43 45.070 25.001 11.258 1.00 0.00 C ATOM 334 CB GLU 43 45.810 25.854 10.200 1.00 0.00 C ATOM 335 CG GLU 43 45.260 25.788 8.771 1.00 0.00 C ATOM 336 CD GLU 43 44.308 26.967 8.579 1.00 0.00 C ATOM 337 OE1 GLU 43 44.234 27.825 9.499 1.00 0.00 O ATOM 338 OE2 GLU 43 43.650 27.029 7.505 1.00 0.00 O ATOM 339 C GLU 43 43.598 25.202 11.094 1.00 0.00 C ATOM 340 O GLU 43 42.992 25.986 11.820 1.00 0.00 O ATOM 341 N TRP 44 42.977 24.475 10.148 1.00 0.00 N ATOM 342 CA TRP 44 41.585 24.635 9.843 1.00 0.00 C ATOM 343 CB TRP 44 41.177 23.737 8.661 1.00 0.00 C ATOM 344 CG TRP 44 39.840 24.062 8.044 1.00 0.00 C ATOM 345 CD2 TRP 44 39.454 23.631 6.731 1.00 0.00 C ATOM 346 CD1 TRP 44 38.821 24.836 8.512 1.00 0.00 C ATOM 347 NE1 TRP 44 37.833 24.934 7.559 1.00 0.00 N ATOM 348 CE2 TRP 44 38.212 24.199 6.457 1.00 0.00 C ATOM 349 CE3 TRP 44 40.094 22.851 5.815 1.00 0.00 C ATOM 350 CZ2 TRP 44 37.593 23.989 5.256 1.00 0.00 C ATOM 351 CZ3 TRP 44 39.455 22.622 4.616 1.00 0.00 C ATOM 352 CH2 TRP 44 38.227 23.183 4.339 1.00 0.00 H ATOM 353 C TRP 44 40.748 24.251 11.029 1.00 0.00 C ATOM 354 O TRP 44 39.889 25.009 11.473 1.00 0.00 O ATOM 355 N MET 45 41.025 23.081 11.623 1.00 0.00 N ATOM 356 CA MET 45 40.210 22.539 12.680 1.00 0.00 C ATOM 357 CB MET 45 40.630 21.104 13.055 1.00 0.00 C ATOM 358 CG MET 45 39.588 20.324 13.859 1.00 0.00 C ATOM 359 SD MET 45 39.757 18.518 13.712 1.00 0.00 S ATOM 360 CE MET 45 41.451 18.456 14.362 1.00 0.00 C ATOM 361 C MET 45 40.262 23.460 13.866 1.00 0.00 C ATOM 362 O MET 45 39.338 23.490 14.680 1.00 0.00 O ATOM 363 N PHE 46 41.395 24.171 14.026 1.00 0.00 N ATOM 364 CA PHE 46 41.632 25.164 15.038 1.00 0.00 C ATOM 365 CB PHE 46 43.127 25.454 15.255 1.00 0.00 C ATOM 366 CG PHE 46 43.577 24.350 16.147 1.00 0.00 C ATOM 367 CD1 PHE 46 43.431 23.041 15.755 1.00 0.00 C ATOM 368 CD2 PHE 46 44.158 24.621 17.366 1.00 0.00 C ATOM 369 CE1 PHE 46 43.836 22.013 16.572 1.00 0.00 C ATOM 370 CE2 PHE 46 44.569 23.598 18.186 1.00 0.00 C ATOM 371 CZ PHE 46 44.405 22.291 17.791 1.00 0.00 C ATOM 372 C PHE 46 40.874 26.438 14.791 1.00 0.00 C ATOM 373 O PHE 46 40.570 27.128 15.765 1.00 0.00 O ATOM 374 N LYS 47 40.587 26.811 13.511 1.00 0.00 N ATOM 375 CA LYS 47 39.877 28.043 13.248 1.00 0.00 C ATOM 376 CB LYS 47 39.442 28.183 11.773 1.00 0.00 C ATOM 377 CG LYS 47 40.565 28.428 10.757 1.00 0.00 C ATOM 378 CD LYS 47 41.220 29.810 10.837 1.00 0.00 C ATOM 379 CE LYS 47 42.349 30.022 9.820 1.00 0.00 C ATOM 380 NZ LYS 47 41.814 30.070 8.442 1.00 0.00 N ATOM 381 C LYS 47 38.625 27.972 14.068 1.00 0.00 C ATOM 382 O LYS 47 38.388 28.855 14.885 1.00 0.00 O ATOM 383 N LEU 48 37.786 26.939 13.833 1.00 0.00 N ATOM 384 CA LEU 48 36.754 26.475 14.733 1.00 0.00 C ATOM 385 CB LEU 48 37.350 26.158 16.114 1.00 0.00 C ATOM 386 CG LEU 48 36.332 25.651 17.147 1.00 0.00 C ATOM 387 CD1 LEU 48 35.794 24.263 16.769 1.00 0.00 C ATOM 388 CD2 LEU 48 36.921 25.710 18.566 1.00 0.00 C ATOM 389 C LEU 48 35.585 27.406 14.956 1.00 0.00 C ATOM 390 O LEU 48 34.485 26.939 15.251 1.00 0.00 O ATOM 391 N VAL 49 35.793 28.731 14.817 1.00 0.00 N ATOM 392 CA VAL 49 34.860 29.797 15.092 1.00 0.00 C ATOM 393 CB VAL 49 35.547 31.128 15.219 1.00 0.00 C ATOM 394 CG1 VAL 49 34.489 32.218 15.454 1.00 0.00 C ATOM 395 CG2 VAL 49 36.585 31.025 16.349 1.00 0.00 C ATOM 396 C VAL 49 33.799 29.926 14.043 1.00 0.00 C ATOM 397 O VAL 49 32.679 30.336 14.352 1.00 0.00 O ATOM 398 N GLY 50 34.096 29.547 12.782 1.00 0.00 N ATOM 399 CA GLY 50 33.164 29.846 11.727 1.00 0.00 C ATOM 400 C GLY 50 33.885 30.603 10.639 1.00 0.00 C ATOM 401 O GLY 50 33.267 31.296 9.831 1.00 0.00 O ATOM 402 N LYS 51 35.232 30.586 10.723 1.00 0.00 N ATOM 403 CA LYS 51 36.276 31.085 9.855 1.00 0.00 C ATOM 404 CB LYS 51 37.524 31.552 10.628 1.00 0.00 C ATOM 405 CG LYS 51 37.297 32.910 11.296 1.00 0.00 C ATOM 406 CD LYS 51 38.415 33.377 12.231 1.00 0.00 C ATOM 407 CE LYS 51 39.628 32.448 12.285 1.00 0.00 C ATOM 408 NZ LYS 51 39.461 31.455 13.371 1.00 0.00 N ATOM 409 C LYS 51 36.713 30.102 8.794 1.00 0.00 C ATOM 410 O LYS 51 37.742 30.310 8.162 1.00 0.00 O ATOM 411 N GLU 52 36.034 28.950 8.662 1.00 0.00 N ATOM 412 CA GLU 52 36.465 27.798 7.922 1.00 0.00 C ATOM 413 CB GLU 52 35.330 26.774 7.835 1.00 0.00 C ATOM 414 CG GLU 52 34.693 26.531 9.210 1.00 0.00 C ATOM 415 CD GLU 52 35.766 26.618 10.289 1.00 0.00 C ATOM 416 OE1 GLU 52 36.735 25.815 10.233 1.00 0.00 O ATOM 417 OE2 GLU 52 35.628 27.492 11.186 1.00 0.00 O ATOM 418 C GLU 52 37.025 28.071 6.552 1.00 0.00 C ATOM 419 O GLU 52 36.299 28.197 5.563 1.00 0.00 O ATOM 420 N THR 53 38.378 28.102 6.459 1.00 0.00 N ATOM 421 CA THR 53 39.007 28.305 5.183 1.00 0.00 C ATOM 422 CB THR 53 39.374 29.740 4.935 1.00 0.00 C ATOM 423 OG1 THR 53 38.213 30.555 5.019 1.00 0.00 O ATOM 424 CG2 THR 53 39.982 29.857 3.528 1.00 0.00 C ATOM 425 C THR 53 40.253 27.462 5.083 1.00 0.00 C ATOM 426 O THR 53 41.113 27.467 5.965 1.00 0.00 O ATOM 427 N PHE 54 40.368 26.720 3.960 1.00 0.00 N ATOM 428 CA PHE 54 41.462 25.857 3.597 1.00 0.00 C ATOM 429 CB PHE 54 40.909 24.595 2.894 1.00 0.00 C ATOM 430 CG PHE 54 41.921 23.608 2.419 1.00 0.00 C ATOM 431 CD1 PHE 54 42.509 23.733 1.183 1.00 0.00 C ATOM 432 CD2 PHE 54 42.262 22.535 3.201 1.00 0.00 C ATOM 433 CE1 PHE 54 43.423 22.802 0.750 1.00 0.00 C ATOM 434 CE2 PHE 54 43.175 21.597 2.772 1.00 0.00 C ATOM 435 CZ PHE 54 43.760 21.731 1.541 1.00 0.00 C ATOM 436 C PHE 54 42.272 26.591 2.571 1.00 0.00 C ATOM 437 O PHE 54 41.734 27.404 1.819 1.00 0.00 O ATOM 438 N TYR 55 43.601 26.354 2.552 1.00 0.00 N ATOM 439 CA TYR 55 44.448 26.917 1.538 1.00 0.00 C ATOM 440 CB TYR 55 45.539 27.842 2.108 1.00 0.00 C ATOM 441 CG TYR 55 44.850 28.862 2.955 1.00 0.00 C ATOM 442 CD1 TYR 55 44.203 29.934 2.383 1.00 0.00 C ATOM 443 CD2 TYR 55 44.823 28.730 4.326 1.00 0.00 C ATOM 444 CE1 TYR 55 43.561 30.865 3.166 1.00 0.00 C ATOM 445 CE2 TYR 55 44.182 29.659 5.114 1.00 0.00 C ATOM 446 CZ TYR 55 43.552 30.731 4.533 1.00 0.00 C ATOM 447 OH TYR 55 42.892 31.687 5.335 1.00 0.00 H ATOM 448 C TYR 55 45.122 25.725 0.913 1.00 0.00 C ATOM 449 O TYR 55 45.926 25.058 1.561 1.00 0.00 O ATOM 450 N VAL 56 44.838 25.445 -0.379 1.00 0.00 N ATOM 451 CA VAL 56 45.308 24.241 -1.024 1.00 0.00 C ATOM 452 CB VAL 56 44.787 24.048 -2.417 1.00 0.00 C ATOM 453 CG1 VAL 56 45.534 22.863 -3.059 1.00 0.00 C ATOM 454 CG2 VAL 56 43.269 23.813 -2.320 1.00 0.00 C ATOM 455 C VAL 56 46.807 24.179 -1.059 1.00 0.00 C ATOM 456 O VAL 56 47.373 23.099 -0.875 1.00 0.00 O ATOM 457 N GLY 57 47.502 25.315 -1.273 1.00 0.00 N ATOM 458 CA GLY 57 48.935 25.223 -1.214 1.00 0.00 C ATOM 459 C GLY 57 49.642 26.075 -2.226 1.00 0.00 C ATOM 460 O GLY 57 50.611 26.738 -1.867 1.00 0.00 O ATOM 461 N ALA 58 49.210 26.125 -3.499 1.00 0.00 N ATOM 462 CA ALA 58 49.977 26.922 -4.416 1.00 0.00 C ATOM 463 CB ALA 58 50.888 26.095 -5.339 1.00 0.00 C ATOM 464 C ALA 58 49.023 27.665 -5.293 1.00 0.00 C ATOM 465 O ALA 58 47.812 27.459 -5.233 1.00 0.00 O ATOM 466 N ALA 59 49.568 28.594 -6.099 1.00 0.00 N ATOM 467 CA ALA 59 48.807 29.340 -7.055 1.00 0.00 C ATOM 468 CB ALA 59 48.157 28.446 -8.129 1.00 0.00 C ATOM 469 C ALA 59 47.734 30.136 -6.376 1.00 0.00 C ATOM 470 O ALA 59 46.720 30.456 -6.994 1.00 0.00 O ATOM 471 N LYS 60 47.931 30.507 -5.095 1.00 0.00 N ATOM 472 CA LYS 60 46.983 31.362 -4.433 1.00 0.00 C ATOM 473 CB LYS 60 46.805 32.694 -5.191 1.00 0.00 C ATOM 474 CG LYS 60 48.092 33.507 -5.366 1.00 0.00 C ATOM 475 CD LYS 60 48.040 34.470 -6.558 1.00 0.00 C ATOM 476 CE LYS 60 46.856 35.435 -6.528 1.00 0.00 C ATOM 477 NZ LYS 60 47.194 36.610 -5.697 1.00 0.00 N ATOM 478 C LYS 60 45.632 30.704 -4.407 1.00 0.00 C ATOM 479 O LYS 60 44.612 31.388 -4.436 1.00 0.00 O ATOM 480 N THR 61 45.567 29.362 -4.322 1.00 0.00 N ATOM 481 CA THR 61 44.267 28.752 -4.355 1.00 0.00 C ATOM 482 CB THR 61 44.293 27.333 -4.860 1.00 0.00 C ATOM 483 OG1 THR 61 45.087 26.527 -4.003 1.00 0.00 O ATOM 484 CG2 THR 61 44.863 27.305 -6.290 1.00 0.00 C ATOM 485 C THR 61 43.641 28.725 -2.992 1.00 0.00 C ATOM 486 O THR 61 44.045 27.966 -2.113 1.00 0.00 O ATOM 487 N LYS 62 42.610 29.566 -2.781 1.00 0.00 N ATOM 488 CA LYS 62 41.864 29.472 -1.562 1.00 0.00 C ATOM 489 CB LYS 62 41.119 30.764 -1.175 1.00 0.00 C ATOM 490 CG LYS 62 42.085 31.873 -0.745 1.00 0.00 C ATOM 491 CD LYS 62 41.453 33.261 -0.629 1.00 0.00 C ATOM 492 CE LYS 62 42.457 34.337 -0.208 1.00 0.00 C ATOM 493 NZ LYS 62 41.802 35.663 -0.170 1.00 0.00 N ATOM 494 C LYS 62 40.885 28.373 -1.819 1.00 0.00 C ATOM 495 O LYS 62 40.580 28.091 -2.976 1.00 0.00 O ATOM 496 N ALA 63 40.442 27.658 -0.763 1.00 0.00 N ATOM 497 CA ALA 63 39.468 26.623 -0.940 1.00 0.00 C ATOM 498 CB ALA 63 40.098 25.252 -1.242 1.00 0.00 C ATOM 499 C ALA 63 38.684 26.502 0.341 1.00 0.00 C ATOM 500 O ALA 63 39.226 26.131 1.378 1.00 0.00 O ATOM 501 N THR 64 37.365 26.771 0.309 1.00 0.00 N ATOM 502 CA THR 64 36.600 26.680 1.530 1.00 0.00 C ATOM 503 CB THR 64 35.493 27.691 1.626 1.00 0.00 C ATOM 504 OG1 THR 64 34.548 27.481 0.587 1.00 0.00 O ATOM 505 CG2 THR 64 36.089 29.105 1.524 1.00 0.00 C ATOM 506 C THR 64 35.947 25.322 1.577 1.00 0.00 C ATOM 507 O THR 64 36.016 24.594 0.595 1.00 0.00 O ATOM 508 N ILE 65 35.562 24.802 2.767 1.00 0.00 N ATOM 509 CA ILE 65 34.646 23.684 2.850 1.00 0.00 C ATOM 510 CB ILE 65 35.176 22.431 3.485 1.00 0.00 C ATOM 511 CG2 ILE 65 34.008 21.489 3.813 1.00 0.00 C ATOM 512 CG1 ILE 65 36.162 21.818 2.466 1.00 0.00 C ATOM 513 CD1 ILE 65 36.722 20.444 2.827 1.00 0.00 C ATOM 514 C ILE 65 33.212 24.000 3.247 1.00 0.00 C ATOM 515 O ILE 65 32.270 23.365 2.782 1.00 0.00 O ATOM 516 N ASN 66 33.015 24.928 4.209 1.00 0.00 N ATOM 517 CA ASN 66 31.733 25.408 4.690 1.00 0.00 C ATOM 518 CB ASN 66 30.924 26.172 3.624 1.00 0.00 C ATOM 519 CG ASN 66 31.545 27.551 3.430 1.00 0.00 C ATOM 520 OD1 ASN 66 31.898 28.233 4.391 1.00 0.00 O ATOM 521 ND2 ASN 66 31.679 27.981 2.148 1.00 0.00 N ATOM 522 C ASN 66 30.823 24.360 5.305 1.00 0.00 C ATOM 523 O ASN 66 29.631 24.625 5.458 1.00 0.00 O ATOM 524 N ILE 67 31.326 23.193 5.769 1.00 0.00 N ATOM 525 CA ILE 67 30.411 22.212 6.313 1.00 0.00 C ATOM 526 CB ILE 67 31.037 20.857 6.493 1.00 0.00 C ATOM 527 CG2 ILE 67 30.044 19.973 7.264 1.00 0.00 C ATOM 528 CG1 ILE 67 31.478 20.276 5.138 1.00 0.00 C ATOM 529 CD1 ILE 67 32.395 19.059 5.258 1.00 0.00 C ATOM 530 C ILE 67 29.936 22.633 7.672 1.00 0.00 C ATOM 531 O ILE 67 30.698 22.663 8.635 1.00 0.00 O ATOM 532 N ASP 68 28.627 22.934 7.794 1.00 0.00 N ATOM 533 CA ASP 68 28.094 23.325 9.072 1.00 0.00 C ATOM 534 CB ASP 68 26.787 24.122 8.979 1.00 0.00 C ATOM 535 CG ASP 68 26.701 24.919 10.266 1.00 0.00 C ATOM 536 OD1 ASP 68 27.784 25.206 10.844 1.00 0.00 O ATOM 537 OD2 ASP 68 25.564 25.264 10.682 1.00 0.00 O ATOM 538 C ASP 68 27.846 22.079 9.889 1.00 0.00 C ATOM 539 O ASP 68 27.639 21.004 9.333 1.00 0.00 O ATOM 540 N ALA 69 28.100 22.187 11.215 1.00 0.00 N ATOM 541 CA ALA 69 27.932 21.284 12.338 1.00 0.00 C ATOM 542 CB ALA 69 29.021 21.513 13.397 1.00 0.00 C ATOM 543 C ALA 69 26.616 21.256 13.073 1.00 0.00 C ATOM 544 O ALA 69 26.268 20.236 13.660 1.00 0.00 O ATOM 545 N ILE 70 25.930 22.414 13.141 1.00 0.00 N ATOM 546 CA ILE 70 24.809 22.760 13.990 1.00 0.00 C ATOM 547 CB ILE 70 24.014 23.911 13.457 1.00 0.00 C ATOM 548 CG2 ILE 70 22.785 24.095 14.359 1.00 0.00 C ATOM 549 CG1 ILE 70 24.902 25.159 13.366 1.00 0.00 C ATOM 550 CD1 ILE 70 25.508 25.565 14.708 1.00 0.00 C ATOM 551 C ILE 70 23.834 21.660 14.303 1.00 0.00 C ATOM 552 O ILE 70 23.460 20.856 13.454 1.00 0.00 O ATOM 553 N SER 71 23.412 21.613 15.592 1.00 0.00 N ATOM 554 CA SER 71 22.377 20.732 16.072 1.00 0.00 C ATOM 555 CB SER 71 21.081 20.789 15.235 1.00 0.00 C ATOM 556 OG SER 71 20.022 20.106 15.895 1.00 0.00 O ATOM 557 C SER 71 22.905 19.335 16.100 1.00 0.00 C ATOM 558 O SER 71 24.114 19.130 16.195 1.00 0.00 O ATOM 559 N GLY 72 21.995 18.334 16.069 1.00 0.00 N ATOM 560 CA GLY 72 22.462 16.983 16.031 1.00 0.00 C ATOM 561 C GLY 72 23.289 16.929 14.797 1.00 0.00 C ATOM 562 O GLY 72 24.404 16.411 14.811 1.00 0.00 O ATOM 563 N PHE 73 22.741 17.458 13.684 1.00 0.00 N ATOM 564 CA PHE 73 23.577 17.674 12.545 1.00 0.00 C ATOM 565 CB PHE 73 24.359 16.441 12.040 1.00 0.00 C ATOM 566 CG PHE 73 23.414 15.355 11.662 1.00 0.00 C ATOM 567 CD1 PHE 73 22.710 15.407 10.481 1.00 0.00 C ATOM 568 CD2 PHE 73 23.253 14.270 12.492 1.00 0.00 C ATOM 569 CE1 PHE 73 21.844 14.393 10.142 1.00 0.00 C ATOM 570 CE2 PHE 73 22.389 13.254 12.158 1.00 0.00 C ATOM 571 CZ PHE 73 21.680 13.318 10.983 1.00 0.00 C ATOM 572 C PHE 73 22.786 18.244 11.414 1.00 0.00 C ATOM 573 O PHE 73 21.589 18.004 11.268 1.00 0.00 O ATOM 574 N ALA 74 23.477 19.087 10.630 1.00 0.00 N ATOM 575 CA ALA 74 23.063 19.663 9.390 1.00 0.00 C ATOM 576 CB ALA 74 22.320 20.999 9.553 1.00 0.00 C ATOM 577 C ALA 74 24.389 19.960 8.792 1.00 0.00 C ATOM 578 O ALA 74 25.120 20.790 9.328 1.00 0.00 O ATOM 579 N TYR 75 24.740 19.305 7.672 1.00 0.00 N ATOM 580 CA TYR 75 26.087 19.464 7.224 1.00 0.00 C ATOM 581 CB TYR 75 26.941 18.219 7.544 1.00 0.00 C ATOM 582 CG TYR 75 26.109 16.992 7.330 1.00 0.00 C ATOM 583 CD1 TYR 75 25.831 16.497 6.078 1.00 0.00 C ATOM 584 CD2 TYR 75 25.605 16.313 8.419 1.00 0.00 C ATOM 585 CE1 TYR 75 25.063 15.366 5.915 1.00 0.00 C ATOM 586 CE2 TYR 75 24.838 15.182 8.267 1.00 0.00 C ATOM 587 CZ TYR 75 24.562 14.707 7.010 1.00 0.00 C ATOM 588 OH TYR 75 23.774 13.548 6.845 1.00 0.00 H ATOM 589 C TYR 75 26.148 19.783 5.768 1.00 0.00 C ATOM 590 O TYR 75 25.799 18.968 4.918 1.00 0.00 O ATOM 591 N GLU 76 26.657 20.985 5.439 1.00 0.00 N ATOM 592 CA GLU 76 26.692 21.365 4.063 1.00 0.00 C ATOM 593 CB GLU 76 26.009 22.713 3.778 1.00 0.00 C ATOM 594 CG GLU 76 26.335 23.282 2.394 1.00 0.00 C ATOM 595 CD GLU 76 25.787 22.342 1.333 1.00 0.00 C ATOM 596 OE1 GLU 76 24.540 22.192 1.264 1.00 0.00 O ATOM 597 OE2 GLU 76 26.611 21.764 0.575 1.00 0.00 O ATOM 598 C GLU 76 28.107 21.484 3.633 1.00 0.00 C ATOM 599 O GLU 76 28.836 22.369 4.074 1.00 0.00 O ATOM 600 N TYR 77 28.521 20.614 2.697 1.00 0.00 N ATOM 601 CA TYR 77 29.897 20.641 2.323 1.00 0.00 C ATOM 602 CB TYR 77 30.604 19.278 2.494 1.00 0.00 C ATOM 603 CG TYR 77 29.722 18.182 1.997 1.00 0.00 C ATOM 604 CD1 TYR 77 29.623 17.869 0.660 1.00 0.00 C ATOM 605 CD2 TYR 77 28.991 17.454 2.907 1.00 0.00 C ATOM 606 CE1 TYR 77 28.801 16.843 0.251 1.00 0.00 C ATOM 607 CE2 TYR 77 28.168 16.430 2.506 1.00 0.00 C ATOM 608 CZ TYR 77 28.077 16.124 1.172 1.00 0.00 C ATOM 609 OH TYR 77 27.236 15.072 0.754 1.00 0.00 H ATOM 610 C TYR 77 30.081 21.162 0.937 1.00 0.00 C ATOM 611 O TYR 77 29.569 20.603 -0.034 1.00 0.00 O ATOM 612 N THR 78 30.805 22.300 0.833 1.00 0.00 N ATOM 613 CA THR 78 31.117 22.865 -0.446 1.00 0.00 C ATOM 614 CB THR 78 30.214 23.995 -0.834 1.00 0.00 C ATOM 615 OG1 THR 78 28.863 23.554 -0.863 1.00 0.00 O ATOM 616 CG2 THR 78 30.641 24.501 -2.224 1.00 0.00 C ATOM 617 C THR 78 32.522 23.395 -0.430 1.00 0.00 C ATOM 618 O THR 78 32.884 24.233 0.397 1.00 0.00 O ATOM 619 N LEU 79 33.366 22.900 -1.358 1.00 0.00 N ATOM 620 CA LEU 79 34.706 23.396 -1.499 1.00 0.00 C ATOM 621 CB LEU 79 35.645 22.354 -2.147 1.00 0.00 C ATOM 622 CG LEU 79 37.139 22.730 -2.248 1.00 0.00 C ATOM 623 CD1 LEU 79 37.961 21.539 -2.754 1.00 0.00 C ATOM 624 CD2 LEU 79 37.385 23.958 -3.130 1.00 0.00 C ATOM 625 C LEU 79 34.612 24.601 -2.380 1.00 0.00 C ATOM 626 O LEU 79 33.828 24.613 -3.327 1.00 0.00 O ATOM 627 N GLU 80 35.391 25.663 -2.079 1.00 0.00 N ATOM 628 CA GLU 80 35.339 26.821 -2.923 1.00 0.00 C ATOM 629 CB GLU 80 34.731 28.041 -2.224 1.00 0.00 C ATOM 630 CG GLU 80 33.240 27.858 -1.958 1.00 0.00 C ATOM 631 CD GLU 80 32.761 29.065 -1.177 1.00 0.00 C ATOM 632 OE1 GLU 80 33.314 30.176 -1.396 1.00 0.00 O ATOM 633 OE2 GLU 80 31.834 28.889 -0.345 1.00 0.00 O ATOM 634 C GLU 80 36.728 27.171 -3.317 1.00 0.00 C ATOM 635 O GLU 80 37.498 27.710 -2.522 1.00 0.00 O ATOM 636 N ILE 81 37.073 26.889 -4.584 1.00 0.00 N ATOM 637 CA ILE 81 38.387 27.203 -5.035 1.00 0.00 C ATOM 638 CB ILE 81 39.121 25.996 -5.556 1.00 0.00 C ATOM 639 CG2 ILE 81 38.557 25.596 -6.927 1.00 0.00 C ATOM 640 CG1 ILE 81 40.628 26.249 -5.574 1.00 0.00 C ATOM 641 CD1 ILE 81 41.431 24.962 -5.732 1.00 0.00 C ATOM 642 C ILE 81 38.269 28.237 -6.112 1.00 0.00 C ATOM 643 O ILE 81 37.493 28.110 -7.059 1.00 0.00 O ATOM 644 N ASN 82 38.996 29.348 -5.914 1.00 0.00 N ATOM 645 CA ASN 82 39.140 30.396 -6.880 1.00 0.00 C ATOM 646 CB ASN 82 40.076 30.007 -8.040 1.00 0.00 C ATOM 647 CG ASN 82 41.479 29.850 -7.465 1.00 0.00 C ATOM 648 OD1 ASN 82 41.749 30.291 -6.351 1.00 0.00 O ATOM 649 ND2 ASN 82 42.396 29.208 -8.239 1.00 0.00 N ATOM 650 C ASN 82 37.827 30.833 -7.455 1.00 0.00 C ATOM 651 O ASN 82 37.728 31.059 -8.660 1.00 0.00 O ATOM 652 N GLY 83 36.785 30.986 -6.614 1.00 0.00 N ATOM 653 CA GLY 83 35.543 31.534 -7.085 1.00 0.00 C ATOM 654 C GLY 83 34.721 30.533 -7.845 1.00 0.00 C ATOM 655 O GLY 83 33.914 30.926 -8.687 1.00 0.00 O ATOM 656 N LYS 84 34.906 29.219 -7.601 1.00 0.00 N ATOM 657 CA LYS 84 34.069 28.243 -8.251 1.00 0.00 C ATOM 658 CB LYS 84 34.832 27.244 -9.140 1.00 0.00 C ATOM 659 CG LYS 84 35.173 27.790 -10.521 1.00 0.00 C ATOM 660 CD LYS 84 36.120 28.982 -10.468 1.00 0.00 C ATOM 661 CE LYS 84 36.254 29.704 -11.804 1.00 0.00 C ATOM 662 NZ LYS 84 36.783 31.064 -11.578 1.00 0.00 N ATOM 663 C LYS 84 33.423 27.420 -7.183 1.00 0.00 C ATOM 664 O LYS 84 34.105 26.884 -6.314 1.00 0.00 O ATOM 665 N SER 85 32.078 27.295 -7.210 1.00 0.00 N ATOM 666 CA SER 85 31.466 26.470 -6.211 1.00 0.00 C ATOM 667 CB SER 85 29.966 26.757 -5.999 1.00 0.00 C ATOM 668 OG SER 85 29.782 28.078 -5.509 1.00 0.00 O ATOM 669 C SER 85 31.605 25.066 -6.695 1.00 0.00 C ATOM 670 O SER 85 30.824 24.596 -7.523 1.00 0.00 O ATOM 671 N LEU 86 32.608 24.340 -6.168 1.00 0.00 N ATOM 672 CA LEU 86 32.807 23.010 -6.651 1.00 0.00 C ATOM 673 CB LEU 86 34.155 22.402 -6.242 1.00 0.00 C ATOM 674 CG LEU 86 35.333 23.271 -6.717 1.00 0.00 C ATOM 675 CD1 LEU 86 35.494 24.519 -5.839 1.00 0.00 C ATOM 676 CD2 LEU 86 36.624 22.469 -6.861 1.00 0.00 C ATOM 677 C LEU 86 31.694 22.174 -6.115 1.00 0.00 C ATOM 678 O LEU 86 31.450 22.139 -4.910 1.00 0.00 O ATOM 679 N LYS 87 31.008 21.448 -7.019 1.00 0.00 N ATOM 680 CA LYS 87 29.844 20.702 -6.640 1.00 0.00 C ATOM 681 CB LYS 87 29.060 20.121 -7.831 1.00 0.00 C ATOM 682 CG LYS 87 28.158 21.157 -8.505 1.00 0.00 C ATOM 683 CD LYS 87 28.909 22.368 -9.059 1.00 0.00 C ATOM 684 CE LYS 87 29.820 22.039 -10.240 1.00 0.00 C ATOM 685 NZ LYS 87 29.044 22.072 -11.501 1.00 0.00 N ATOM 686 C LYS 87 30.213 19.592 -5.724 1.00 0.00 C ATOM 687 O LYS 87 31.270 18.973 -5.852 1.00 0.00 O ATOM 688 N LYS 88 29.329 19.339 -4.737 1.00 0.00 N ATOM 689 CA LYS 88 29.576 18.265 -3.832 1.00 0.00 C ATOM 690 CB LYS 88 28.704 18.260 -2.561 1.00 0.00 C ATOM 691 CG LYS 88 27.193 18.328 -2.804 1.00 0.00 C ATOM 692 CD LYS 88 26.698 19.704 -3.252 1.00 0.00 C ATOM 693 CE LYS 88 26.462 20.664 -2.082 1.00 0.00 C ATOM 694 NZ LYS 88 25.231 20.290 -1.348 1.00 0.00 N ATOM 695 C LYS 88 29.318 17.003 -4.569 1.00 0.00 C ATOM 696 O LYS 88 28.314 16.871 -5.271 1.00 0.00 O ATOM 697 N TYR 89 30.232 16.031 -4.428 1.00 0.00 N ATOM 698 CA TYR 89 30.009 14.792 -5.096 1.00 0.00 C ATOM 699 CB TYR 89 31.299 14.155 -5.637 1.00 0.00 C ATOM 700 CG TYR 89 31.749 14.998 -6.779 1.00 0.00 C ATOM 701 CD1 TYR 89 32.466 16.155 -6.573 1.00 0.00 C ATOM 702 CD2 TYR 89 31.441 14.620 -8.064 1.00 0.00 C ATOM 703 CE1 TYR 89 32.868 16.920 -7.644 1.00 0.00 C ATOM 704 CE2 TYR 89 31.841 15.379 -9.135 1.00 0.00 C ATOM 705 CZ TYR 89 32.551 16.535 -8.926 1.00 0.00 C ATOM 706 OH TYR 89 32.959 17.318 -10.028 1.00 0.00 H ATOM 707 C TYR 89 29.421 13.879 -4.078 1.00 0.00 C ATOM 708 O TYR 89 30.105 13.052 -3.478 1.00 0.00 O ATOM 709 N MET 90 28.096 14.003 -3.883 1.00 0.00 N ATOM 710 CA MET 90 27.430 13.207 -2.899 1.00 0.00 C ATOM 711 CB MET 90 26.039 13.747 -2.524 1.00 0.00 C ATOM 712 CG MET 90 26.086 15.087 -1.789 1.00 0.00 C ATOM 713 SD MET 90 24.462 15.853 -1.517 1.00 0.00 S ATOM 714 CE MET 90 24.335 16.475 -3.216 1.00 0.00 C ATOM 715 C MET 90 27.246 11.817 -3.483 1.00 0.00 C ATOM 716 O MET 90 26.857 10.899 -2.712 1.00 0.00 O ATOM 717 OXT MET 90 27.495 11.652 -4.707 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 74.44 51.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 64.39 57.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 77.86 47.2 108 100.0 108 ARMSMC BURIED . . . . . . . . 68.83 57.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.92 45.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 84.41 47.0 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 82.77 46.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 91.74 40.9 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 76.92 51.6 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.51 50.9 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 74.13 52.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 75.67 51.3 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 75.39 51.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 73.16 50.0 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.06 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 74.06 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 73.79 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 75.67 55.6 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 69.01 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 103.19 23.1 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 103.19 23.1 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 108.62 20.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 111.99 9.1 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 14.96 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.63 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.63 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0515 CRMSCA SECONDARY STRUCTURE . . 2.78 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.39 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.09 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.70 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 2.98 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.42 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.28 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.77 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.92 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.37 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.99 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.63 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.76 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.74 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.70 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.02 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.694 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.419 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.354 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.657 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.778 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.560 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.411 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.793 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.463 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.575 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.731 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.650 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.871 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.561 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.137 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.405 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.336 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 6 34 48 64 87 90 90 DISTCA CA (P) 6.67 37.78 53.33 71.11 96.67 90 DISTCA CA (RMS) 0.77 1.41 1.78 2.40 4.15 DISTCA ALL (N) 27 198 311 462 656 716 716 DISTALL ALL (P) 3.77 27.65 43.44 64.53 91.62 716 DISTALL ALL (RMS) 0.79 1.44 1.88 2.68 4.49 DISTALL END of the results output