####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS424_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS424_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 50 40 - 89 5.00 8.28 LONGEST_CONTINUOUS_SEGMENT: 50 41 - 90 4.98 8.56 LCS_AVERAGE: 53.15 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 14 - 41 1.84 9.63 LCS_AVERAGE: 20.54 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 1.00 9.68 LCS_AVERAGE: 14.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 14 45 3 4 4 4 8 15 22 26 38 43 50 55 60 65 69 71 75 78 80 83 LCS_GDT T 2 T 2 4 14 45 3 4 11 16 24 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT D 3 D 3 4 14 45 5 7 8 16 22 23 33 38 39 42 50 55 62 65 69 71 75 78 80 83 LCS_GDT L 4 L 4 4 14 45 3 4 4 4 8 12 20 24 29 40 41 44 52 61 66 71 74 78 80 83 LCS_GDT V 5 V 5 7 14 45 3 4 9 16 22 23 33 38 39 42 48 55 62 65 69 71 75 78 80 83 LCS_GDT A 6 A 6 7 14 45 5 7 8 16 22 23 33 38 39 42 48 55 62 65 69 71 75 78 80 83 LCS_GDT V 7 V 7 7 14 45 5 7 8 16 22 23 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT W 8 W 8 7 14 45 5 7 8 16 22 23 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT D 9 D 9 7 14 45 5 9 11 16 22 23 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT V 10 V 10 7 14 45 5 7 10 13 22 23 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT A 11 A 11 7 14 45 3 7 8 10 22 23 33 38 39 43 50 55 62 65 69 71 74 78 80 83 LCS_GDT L 12 L 12 7 14 45 3 5 8 16 22 25 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT S 13 S 13 6 14 45 3 5 7 16 22 23 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT D 14 D 14 5 28 45 3 5 11 19 24 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT G 15 G 15 4 28 45 4 4 13 22 26 27 32 34 39 42 46 54 60 65 68 71 74 76 79 83 LCS_GDT V 16 V 16 4 28 45 4 4 6 7 9 22 28 31 34 39 44 50 53 65 66 70 74 75 79 83 LCS_GDT H 17 H 17 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 18 K 18 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT I 19 I 19 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT E 20 E 20 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT F 21 F 21 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT E 22 E 22 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT H 23 H 23 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT G 24 G 24 25 28 45 7 17 23 25 26 28 33 38 39 43 50 55 62 65 68 71 75 78 80 83 LCS_GDT T 25 T 25 25 28 45 8 17 23 25 26 28 33 38 39 43 50 55 62 65 68 71 74 77 80 83 LCS_GDT T 26 T 26 25 28 45 5 17 23 25 26 28 33 38 39 43 50 55 62 65 68 71 74 76 80 83 LCS_GDT S 27 S 27 25 28 45 8 17 23 25 26 28 33 38 39 43 50 55 62 65 68 71 74 77 80 83 LCS_GDT G 28 G 28 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 68 71 74 77 80 83 LCS_GDT K 29 K 29 25 28 45 6 14 21 25 26 28 33 38 39 43 50 55 62 65 68 71 75 78 80 83 LCS_GDT R 30 R 30 25 28 45 6 16 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT V 31 V 31 25 28 45 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT V 32 V 32 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT Y 33 Y 33 25 28 45 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT V 34 V 34 25 28 45 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT D 35 D 35 25 28 45 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT G 36 G 36 25 28 45 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 37 K 37 25 28 45 9 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT E 38 E 38 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT E 39 E 39 25 28 45 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT I 40 I 40 25 28 50 6 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT R 41 R 41 25 28 50 3 9 22 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 42 K 42 3 26 50 3 3 4 5 9 17 23 29 36 43 49 55 62 65 69 71 75 78 80 83 LCS_GDT E 43 E 43 3 4 50 3 3 5 7 9 16 19 26 32 43 49 54 60 64 69 71 75 78 80 83 LCS_GDT W 44 W 44 3 4 50 3 3 4 6 9 14 16 26 33 40 44 49 54 60 67 71 75 78 80 83 LCS_GDT M 45 M 45 4 4 50 3 4 4 4 4 12 18 26 32 39 44 49 56 63 69 71 75 78 80 83 LCS_GDT F 46 F 46 4 4 50 3 6 7 8 14 16 22 26 33 40 44 49 54 62 69 71 75 78 80 83 LCS_GDT K 47 K 47 4 6 50 3 4 8 9 16 17 22 27 33 40 44 48 53 58 60 67 74 78 80 82 LCS_GDT L 48 L 48 4 6 50 3 4 4 7 7 13 21 26 32 40 44 47 51 58 60 66 69 78 80 82 LCS_GDT V 49 V 49 3 6 50 3 5 8 12 15 19 25 27 33 40 44 49 54 62 69 71 75 78 80 83 LCS_GDT G 50 G 50 3 9 50 3 6 11 13 16 21 25 29 38 43 49 54 60 64 69 71 75 78 80 83 LCS_GDT K 51 K 51 7 9 50 3 5 7 11 15 21 25 28 33 43 49 54 60 64 69 71 75 78 80 83 LCS_GDT E 52 E 52 7 9 50 3 6 9 13 17 21 25 27 38 43 49 55 62 65 69 71 75 78 80 83 LCS_GDT T 53 T 53 7 9 50 3 5 7 8 19 25 29 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT F 54 F 54 7 9 50 4 5 7 12 17 21 25 27 33 41 48 55 62 65 69 71 75 78 80 83 LCS_GDT Y 55 Y 55 7 9 50 4 5 7 8 11 23 28 32 39 43 49 55 62 65 69 71 75 78 80 83 LCS_GDT V 56 V 56 7 16 50 4 6 9 13 17 21 24 27 32 40 44 52 62 65 69 71 75 78 80 83 LCS_GDT G 57 G 57 7 16 50 4 6 9 13 17 21 24 27 33 40 44 50 59 64 69 71 75 78 80 83 LCS_GDT A 58 A 58 6 16 50 4 6 8 13 17 21 25 27 33 40 44 49 53 60 66 71 75 78 80 83 LCS_GDT A 59 A 59 6 16 50 4 6 8 13 17 21 25 27 33 40 44 49 53 58 66 71 75 78 80 83 LCS_GDT K 60 K 60 6 16 50 3 6 9 13 17 21 25 27 33 40 44 48 53 58 62 70 75 78 80 83 LCS_GDT T 61 T 61 6 16 50 3 6 6 11 14 21 25 27 36 42 48 55 62 65 69 71 75 78 80 83 LCS_GDT K 62 K 62 10 16 50 5 9 11 13 15 20 27 31 36 42 49 55 62 65 69 71 75 78 80 83 LCS_GDT A 63 A 63 10 16 50 5 9 15 17 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT T 64 T 64 10 16 50 5 9 11 13 23 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT I 65 I 65 10 16 50 5 9 14 19 23 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT N 66 N 66 10 16 50 5 9 11 15 22 24 29 32 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT I 67 I 67 10 16 50 5 9 11 13 17 21 25 27 33 43 49 54 60 64 69 71 75 78 80 83 LCS_GDT D 68 D 68 10 16 50 4 9 11 13 17 21 25 27 33 40 45 54 59 64 69 71 75 78 80 83 LCS_GDT A 69 A 69 10 16 50 3 7 11 13 17 21 25 27 33 40 44 49 54 61 69 71 75 78 80 83 LCS_GDT I 70 I 70 10 16 50 4 9 11 13 16 21 25 27 32 40 44 49 53 58 62 69 74 78 80 82 LCS_GDT S 71 S 71 10 16 50 4 4 10 13 17 21 25 27 29 37 42 47 48 52 58 63 69 72 77 80 LCS_GDT G 72 G 72 4 18 50 4 4 4 8 13 17 21 27 32 40 44 47 50 58 60 64 69 72 76 80 LCS_GDT F 73 F 73 16 18 50 6 9 16 16 16 17 22 27 32 40 44 47 51 58 60 66 69 78 80 82 LCS_GDT A 74 A 74 16 18 50 6 13 16 16 16 17 22 27 33 40 44 49 54 61 68 71 75 78 80 83 LCS_GDT Y 75 Y 75 16 18 50 6 13 16 16 16 17 22 27 33 40 44 49 54 62 69 71 75 78 80 83 LCS_GDT E 76 E 76 16 18 50 6 13 16 16 16 17 22 27 33 40 47 54 60 64 69 71 75 78 80 83 LCS_GDT Y 77 Y 77 16 18 50 6 13 16 16 16 23 26 32 38 43 49 55 62 65 69 71 75 78 80 83 LCS_GDT T 78 T 78 16 18 50 7 13 16 20 24 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT L 79 L 79 16 18 50 5 13 16 16 16 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT E 80 E 80 16 18 50 7 13 16 16 16 17 22 34 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT I 81 I 81 16 18 50 7 13 16 16 16 17 21 27 33 41 48 55 62 65 69 71 75 78 80 83 LCS_GDT N 82 N 82 16 18 50 7 13 16 16 16 17 21 27 33 41 48 55 62 65 69 71 75 78 80 83 LCS_GDT G 83 G 83 16 18 50 7 13 16 16 16 17 29 34 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 84 K 84 16 18 50 7 13 16 16 16 23 29 34 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT S 85 S 85 16 18 50 7 13 16 16 16 25 29 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT L 86 L 86 16 18 50 3 11 16 16 19 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 87 K 87 16 18 50 3 11 16 16 22 27 32 35 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT K 88 K 88 16 18 50 3 13 16 16 18 24 29 32 38 43 50 55 62 65 69 71 75 78 80 83 LCS_GDT Y 89 Y 89 3 18 50 3 3 7 7 14 17 20 32 37 41 49 55 62 65 69 71 75 78 80 83 LCS_GDT M 90 M 90 3 4 50 0 3 4 5 5 6 7 10 11 11 15 32 39 51 54 63 69 75 77 80 LCS_AVERAGE LCS_A: 29.44 ( 14.64 20.54 53.15 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 17 23 25 26 28 33 38 39 43 50 55 62 65 69 71 75 78 80 83 GDT PERCENT_AT 12.22 18.89 25.56 27.78 28.89 31.11 36.67 42.22 43.33 47.78 55.56 61.11 68.89 72.22 76.67 78.89 83.33 86.67 88.89 92.22 GDT RMS_LOCAL 0.37 0.56 0.84 1.00 1.20 1.57 2.33 2.69 2.82 3.22 3.67 3.96 4.42 4.54 5.21 5.02 5.66 5.82 5.90 6.11 GDT RMS_ALL_AT 9.80 9.68 9.76 9.68 9.69 9.81 9.98 9.91 9.96 8.79 8.56 8.73 8.20 8.36 6.98 7.73 6.92 6.91 7.06 7.03 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: D 14 D 14 # possible swapping detected: E 22 E 22 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: D 68 D 68 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 5.081 0 0.545 0.988 6.921 33.214 34.881 LGA T 2 T 2 1.603 0 0.302 0.292 3.719 59.524 59.592 LGA D 3 D 3 3.443 0 0.685 0.668 4.533 43.929 52.560 LGA L 4 L 4 6.067 0 0.151 1.269 11.580 29.405 15.536 LGA V 5 V 5 3.350 0 0.628 1.010 6.126 43.452 37.075 LGA A 6 A 6 3.646 0 0.046 0.055 4.185 48.333 46.095 LGA V 7 V 7 3.417 0 0.077 0.079 3.483 50.000 50.000 LGA W 8 W 8 3.883 0 0.030 0.335 4.729 41.786 37.653 LGA D 9 D 9 3.963 0 0.070 1.054 4.127 41.786 46.012 LGA V 10 V 10 4.378 0 0.241 1.071 5.543 34.405 35.170 LGA A 11 A 11 4.212 0 0.034 0.059 4.466 40.238 39.619 LGA L 12 L 12 3.198 0 0.452 1.309 4.292 46.786 48.512 LGA S 13 S 13 3.487 0 0.537 0.731 5.229 44.048 44.921 LGA D 14 D 14 1.262 0 0.660 1.149 6.255 64.048 46.369 LGA G 15 G 15 6.242 0 0.365 0.365 7.022 20.952 20.952 LGA V 16 V 16 7.656 0 0.109 1.095 12.142 15.476 8.844 LGA H 17 H 17 3.281 0 0.358 0.453 4.757 43.690 42.905 LGA K 18 K 18 3.063 0 0.021 0.832 3.427 55.476 56.614 LGA I 19 I 19 2.468 0 0.052 0.253 3.177 59.048 57.202 LGA E 20 E 20 2.321 0 0.104 0.221 3.061 66.786 64.074 LGA F 21 F 21 2.459 0 0.057 1.098 8.244 59.048 37.749 LGA E 22 E 22 2.610 0 0.090 0.341 3.801 64.881 57.460 LGA H 23 H 23 3.011 0 0.032 0.301 3.323 50.000 51.429 LGA G 24 G 24 3.271 0 0.098 0.098 3.271 55.476 55.476 LGA T 25 T 25 2.778 0 0.159 0.985 4.643 55.357 54.694 LGA T 26 T 26 3.288 0 0.100 1.100 6.172 50.000 41.701 LGA S 27 S 27 2.635 0 0.142 0.187 2.851 60.952 59.683 LGA G 28 G 28 1.821 0 0.090 0.090 2.211 68.810 68.810 LGA K 29 K 29 2.327 0 0.073 1.126 6.933 68.810 53.810 LGA R 30 R 30 2.038 0 0.043 1.008 3.663 68.810 67.316 LGA V 31 V 31 1.043 0 0.057 1.415 3.558 83.690 73.810 LGA V 32 V 32 0.746 0 0.030 0.076 0.806 90.476 90.476 LGA Y 33 Y 33 0.653 0 0.086 1.170 7.358 88.214 59.722 LGA V 34 V 34 1.130 0 0.037 1.000 3.573 83.690 73.810 LGA D 35 D 35 1.074 0 0.576 1.184 6.163 79.524 61.071 LGA G 36 G 36 1.496 0 0.188 0.188 2.101 75.119 75.119 LGA K 37 K 37 1.030 0 0.068 0.664 3.247 83.690 79.947 LGA E 38 E 38 1.039 0 0.249 0.756 5.307 79.524 59.048 LGA E 39 E 39 1.463 0 0.159 1.027 3.331 77.262 73.228 LGA I 40 I 40 1.066 0 0.250 0.632 2.522 85.952 81.786 LGA R 41 R 41 2.698 0 0.563 0.821 4.628 47.619 48.571 LGA K 42 K 42 8.962 0 0.317 0.956 18.298 4.286 1.905 LGA E 43 E 43 12.297 0 0.043 1.156 16.728 0.000 0.000 LGA W 44 W 44 16.680 0 0.643 0.554 25.197 0.000 0.000 LGA M 45 M 45 14.667 0 0.623 1.320 16.663 0.000 0.417 LGA F 46 F 46 18.826 0 0.098 1.455 21.782 0.000 0.000 LGA K 47 K 47 22.067 0 0.484 1.218 24.374 0.000 0.000 LGA L 48 L 48 20.962 0 0.443 1.285 26.601 0.000 0.000 LGA V 49 V 49 18.266 0 0.113 1.127 22.231 0.000 0.000 LGA G 50 G 50 13.613 0 0.214 0.214 15.122 0.000 0.000 LGA K 51 K 51 13.662 0 0.564 1.005 16.324 0.000 0.000 LGA E 52 E 52 9.682 0 0.242 1.042 13.573 0.476 0.212 LGA T 53 T 53 6.310 0 0.203 0.225 7.249 18.333 17.415 LGA F 54 F 54 7.146 0 0.229 1.152 13.971 14.405 5.238 LGA Y 55 Y 55 4.873 0 0.109 0.931 8.631 17.262 22.143 LGA V 56 V 56 8.567 0 0.103 0.198 12.030 12.381 7.143 LGA G 57 G 57 9.211 0 0.071 0.071 11.048 0.476 0.476 LGA A 58 A 58 11.839 0 0.087 0.091 13.092 0.000 0.000 LGA A 59 A 59 11.106 0 0.289 0.273 11.106 0.119 0.095 LGA K 60 K 60 11.382 0 0.574 1.025 21.016 2.500 1.111 LGA T 61 T 61 6.374 0 0.045 0.989 8.892 10.952 8.707 LGA K 62 K 62 5.115 0 0.479 0.882 13.492 39.167 20.317 LGA A 63 A 63 3.321 0 0.071 0.067 4.994 38.929 41.143 LGA T 64 T 64 5.591 0 0.056 0.144 7.267 24.286 22.109 LGA I 65 I 65 7.934 0 0.043 0.155 9.946 5.119 5.119 LGA N 66 N 66 9.991 0 0.023 0.849 10.903 0.476 0.833 LGA I 67 I 67 12.946 0 0.043 0.132 14.589 0.000 0.000 LGA D 68 D 68 15.315 0 0.027 0.034 16.635 0.000 0.000 LGA A 69 A 69 19.445 0 0.544 0.587 20.788 0.000 0.000 LGA I 70 I 70 21.673 0 0.462 1.325 23.054 0.000 0.000 LGA S 71 S 71 25.412 0 0.520 0.599 27.361 0.000 0.000 LGA G 72 G 72 23.358 0 0.575 0.575 23.716 0.000 0.000 LGA F 73 F 73 20.706 0 0.483 1.256 24.754 0.000 0.000 LGA A 74 A 74 17.177 0 0.218 0.269 18.809 0.000 0.000 LGA Y 75 Y 75 14.756 0 0.091 1.352 20.253 0.000 0.000 LGA E 76 E 76 13.015 0 0.128 0.560 14.817 0.000 0.000 LGA Y 77 Y 77 10.049 0 0.051 1.143 17.430 0.476 0.278 LGA T 78 T 78 9.118 0 0.032 0.087 10.692 2.381 1.497 LGA L 79 L 79 6.911 0 0.059 1.258 7.649 11.786 15.060 LGA E 80 E 80 6.775 0 0.029 0.930 8.346 14.286 11.164 LGA I 81 I 81 6.135 0 0.021 0.604 7.338 18.214 15.357 LGA N 82 N 82 6.249 0 0.084 0.110 8.941 17.143 12.381 LGA G 83 G 83 6.436 0 0.138 0.138 7.673 14.762 14.762 LGA K 84 K 84 7.592 0 0.087 0.945 8.455 11.905 9.577 LGA S 85 S 85 8.793 0 0.231 0.658 10.679 1.905 1.746 LGA L 86 L 86 8.711 0 0.064 0.666 8.927 2.857 3.095 LGA K 87 K 87 10.049 0 0.022 0.744 12.380 0.357 0.159 LGA K 88 K 88 10.565 0 0.256 0.700 18.102 0.238 0.106 LGA Y 89 Y 89 9.709 0 0.433 1.176 17.293 0.357 0.238 LGA M 90 M 90 14.302 0 0.457 1.177 17.736 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 6.864 6.816 7.610 29.390 26.768 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 38 2.69 41.944 36.456 1.361 LGA_LOCAL RMSD: 2.692 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.909 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 6.864 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.545098 * X + -0.479214 * Y + -0.687911 * Z + 35.568645 Y_new = 0.244844 * X + 0.875755 * Y + -0.416057 * Z + 5.225260 Z_new = 0.801822 * X + 0.058361 * Y + 0.594706 * Z + 9.367826 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.422167 -0.930339 0.097822 [DEG: 24.1884 -53.3045 5.6048 ] ZXZ: -1.026845 0.933897 1.498139 [DEG: -58.8339 53.5083 85.8370 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS424_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS424_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 38 2.69 36.456 6.86 REMARK ---------------------------------------------------------- MOLECULE T0540TS424_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 32.705 5.500 7.581 1.00 70.46 N ATOM 2 CA MET 1 34.140 5.668 7.169 1.00 57.13 C ATOM 3 C MET 1 35.129 5.721 8.328 1.00 40.62 C ATOM 4 O MET 1 35.987 4.845 8.449 1.00 47.09 O ATOM 5 CB MET 1 34.210 6.943 6.284 1.00 70.41 C ATOM 6 CG MET 1 35.607 7.274 5.718 1.00 84.73 C ATOM 7 SD MET 1 35.574 8.487 4.358 1.00 95.28 S ATOM 8 CE MET 1 37.364 8.779 4.330 1.00 96.02 C ATOM 9 N THR 2 35.012 6.739 9.216 1.00 31.33 N ATOM 10 CA THR 2 35.750 6.793 10.474 1.00 30.05 C ATOM 11 C THR 2 34.717 7.130 11.521 1.00 25.17 C ATOM 12 O THR 2 34.240 6.272 12.261 1.00 24.93 O ATOM 13 CB THR 2 36.939 7.777 10.501 1.00 49.83 C ATOM 14 OG1 THR 2 36.614 9.094 10.065 1.00 70.93 O ATOM 15 CG2 THR 2 38.060 7.257 9.584 1.00 68.02 C ATOM 16 N ASP 3 34.299 8.409 11.530 1.00 24.58 N ATOM 17 CA ASP 3 33.008 8.857 11.989 1.00 24.03 C ATOM 18 C ASP 3 32.156 8.941 10.711 1.00 23.14 C ATOM 19 O ASP 3 32.505 8.351 9.683 1.00 24.11 O ATOM 20 CB ASP 3 33.180 10.232 12.685 1.00 25.80 C ATOM 21 CG ASP 3 33.984 10.087 13.974 1.00 36.81 C ATOM 22 OD1 ASP 3 35.107 10.655 14.034 1.00 46.11 O ATOM 23 OD2 ASP 3 33.465 9.437 14.917 1.00 44.83 O ATOM 24 N LEU 4 31.027 9.693 10.716 1.00 23.07 N ATOM 25 CA LEU 4 30.248 9.903 9.504 1.00 23.72 C ATOM 26 C LEU 4 30.888 10.998 8.665 1.00 22.36 C ATOM 27 O LEU 4 30.616 12.188 8.841 1.00 23.24 O ATOM 28 CB LEU 4 28.780 10.273 9.836 1.00 25.68 C ATOM 29 CG LEU 4 27.830 10.413 8.621 1.00 31.73 C ATOM 30 CD1 LEU 4 26.456 10.936 9.076 1.00 53.39 C ATOM 31 CD2 LEU 4 27.663 9.097 7.842 1.00 53.11 C ATOM 32 N VAL 5 31.797 10.588 7.751 1.00 21.35 N ATOM 33 CA VAL 5 32.568 11.478 6.908 1.00 21.22 C ATOM 34 C VAL 5 31.866 11.663 5.572 1.00 20.61 C ATOM 35 O VAL 5 31.597 10.701 4.851 1.00 20.95 O ATOM 36 CB VAL 5 33.991 10.980 6.695 1.00 22.45 C ATOM 37 CG1 VAL 5 34.765 11.888 5.726 1.00 33.92 C ATOM 38 CG2 VAL 5 34.726 10.942 8.047 1.00 32.97 C ATOM 39 N ALA 6 31.583 12.941 5.208 1.00 21.06 N ATOM 40 CA ALA 6 31.198 13.328 3.865 1.00 20.86 C ATOM 41 C ALA 6 32.444 13.853 3.180 1.00 20.72 C ATOM 42 O ALA 6 33.216 14.619 3.765 1.00 20.86 O ATOM 43 CB ALA 6 30.120 14.429 3.891 1.00 21.23 C ATOM 44 N VAL 7 32.672 13.400 1.924 1.00 20.53 N ATOM 45 CA VAL 7 33.887 13.686 1.186 1.00 20.45 C ATOM 46 C VAL 7 33.557 14.562 0.005 1.00 20.36 C ATOM 47 O VAL 7 32.696 14.224 -0.809 1.00 20.50 O ATOM 48 CB VAL 7 34.619 12.425 0.719 1.00 20.65 C ATOM 49 CG1 VAL 7 35.969 12.792 0.063 1.00 24.89 C ATOM 50 CG2 VAL 7 34.867 11.495 1.924 1.00 25.00 C ATOM 51 N TRP 8 34.253 15.714 -0.107 1.00 20.25 N ATOM 52 CA TRP 8 34.112 16.627 -1.225 1.00 20.16 C ATOM 53 C TRP 8 35.442 16.722 -1.941 1.00 20.01 C ATOM 54 O TRP 8 36.477 16.974 -1.320 1.00 20.14 O ATOM 55 CB TRP 8 33.680 18.044 -0.759 1.00 20.21 C ATOM 56 CG TRP 8 32.333 18.093 -0.046 1.00 20.59 C ATOM 57 CD1 TRP 8 31.112 17.673 -0.496 1.00 21.04 C ATOM 58 CD2 TRP 8 32.116 18.613 1.280 1.00 20.76 C ATOM 59 NE1 TRP 8 30.143 17.895 0.460 1.00 21.43 N ATOM 60 CE2 TRP 8 30.739 18.472 1.559 1.00 21.27 C ATOM 61 CE3 TRP 8 32.982 19.175 2.212 1.00 20.74 C ATOM 62 CZ2 TRP 8 30.210 18.893 2.775 1.00 21.65 C ATOM 63 CZ3 TRP 8 32.447 19.612 3.430 1.00 21.19 C ATOM 64 CH2 TRP 8 31.080 19.470 3.714 1.00 21.59 H ATOM 65 N ASP 9 35.433 16.505 -3.281 1.00 20.10 N ATOM 66 CA ASP 9 36.609 16.574 -4.120 1.00 20.35 C ATOM 67 C ASP 9 36.687 17.898 -4.838 1.00 20.28 C ATOM 68 O ASP 9 35.815 18.232 -5.640 1.00 20.85 O ATOM 69 CB ASP 9 36.662 15.373 -5.120 1.00 21.38 C ATOM 70 CG ASP 9 35.442 15.241 -6.038 1.00 32.10 C ATOM 71 OD1 ASP 9 35.647 15.217 -7.278 1.00 41.28 O ATOM 72 OD2 ASP 9 34.308 15.125 -5.501 1.00 35.89 O ATOM 73 N VAL 10 37.755 18.674 -4.554 1.00 20.00 N ATOM 74 CA VAL 10 37.979 19.942 -5.199 1.00 20.27 C ATOM 75 C VAL 10 39.210 19.863 -6.055 1.00 20.36 C ATOM 76 O VAL 10 40.334 19.727 -5.566 1.00 20.05 O ATOM 77 CB VAL 10 38.050 21.123 -4.235 1.00 20.59 C ATOM 78 CG1 VAL 10 38.112 22.437 -5.040 1.00 34.49 C ATOM 79 CG2 VAL 10 36.792 21.128 -3.339 1.00 35.96 C ATOM 80 N ALA 11 39.001 19.930 -7.386 1.00 21.25 N ATOM 81 CA ALA 11 40.068 19.974 -8.348 1.00 21.59 C ATOM 82 C ALA 11 40.263 21.396 -8.796 1.00 21.67 C ATOM 83 O ALA 11 39.292 22.073 -9.138 1.00 22.97 O ATOM 84 CB ALA 11 39.754 19.079 -9.561 1.00 23.18 C ATOM 85 N LEU 12 41.525 21.897 -8.769 1.00 20.95 N ATOM 86 CA LEU 12 41.769 23.282 -9.117 1.00 21.56 C ATOM 87 C LEU 12 42.254 23.439 -10.515 1.00 21.67 C ATOM 88 O LEU 12 41.483 23.870 -11.375 1.00 21.67 O ATOM 89 CB LEU 12 42.652 23.985 -8.051 1.00 22.05 C ATOM 90 CG LEU 12 41.875 24.268 -6.737 1.00 23.55 C ATOM 91 CD1 LEU 12 40.652 25.178 -6.938 1.00 27.04 C ATOM 92 CD2 LEU 12 42.787 24.891 -5.677 1.00 26.08 C ATOM 93 N SER 13 43.514 23.094 -10.805 1.00 22.31 N ATOM 94 CA SER 13 43.961 23.152 -12.178 1.00 23.02 C ATOM 95 C SER 13 45.078 22.137 -12.255 1.00 23.27 C ATOM 96 O SER 13 45.022 21.081 -11.624 1.00 23.93 O ATOM 97 CB SER 13 44.416 24.595 -12.576 1.00 23.52 C ATOM 98 OG SER 13 44.711 24.715 -13.972 1.00 40.82 O ATOM 99 N ASP 14 46.157 22.456 -12.990 1.00 23.38 N ATOM 100 CA ASP 14 47.464 21.944 -12.684 1.00 24.28 C ATOM 101 C ASP 14 48.154 23.099 -11.972 1.00 23.76 C ATOM 102 O ASP 14 47.902 24.265 -12.281 1.00 24.80 O ATOM 103 CB ASP 14 48.249 21.556 -13.962 1.00 25.93 C ATOM 104 CG ASP 14 47.539 20.418 -14.688 1.00 32.61 C ATOM 105 OD1 ASP 14 47.481 19.301 -14.114 1.00 38.55 O ATOM 106 OD2 ASP 14 47.080 20.655 -15.836 1.00 36.88 O ATOM 107 N GLY 15 49.005 22.804 -10.965 1.00 22.50 N ATOM 108 CA GLY 15 49.518 23.831 -10.069 1.00 22.62 C ATOM 109 C GLY 15 49.087 23.459 -8.682 1.00 21.73 C ATOM 110 O GLY 15 49.880 22.939 -7.903 1.00 21.15 O ATOM 111 N VAL 16 47.787 23.671 -8.360 1.00 22.51 N ATOM 112 CA VAL 16 47.161 23.019 -7.218 1.00 21.87 C ATOM 113 C VAL 16 46.298 21.931 -7.795 1.00 21.72 C ATOM 114 O VAL 16 45.457 22.188 -8.658 1.00 23.62 O ATOM 115 CB VAL 16 46.371 23.929 -6.297 1.00 22.60 C ATOM 116 CG1 VAL 16 45.963 23.126 -5.041 1.00 23.63 C ATOM 117 CG2 VAL 16 47.257 25.124 -5.896 1.00 24.45 C ATOM 118 N HIS 17 46.566 20.674 -7.364 1.00 21.06 N ATOM 119 CA HIS 17 46.022 19.487 -7.979 1.00 21.46 C ATOM 120 C HIS 17 44.661 19.135 -7.394 1.00 20.55 C ATOM 121 O HIS 17 43.676 19.843 -7.622 1.00 20.98 O ATOM 122 CB HIS 17 47.042 18.318 -7.884 1.00 23.94 C ATOM 123 CG HIS 17 48.332 18.653 -8.586 1.00 34.29 C ATOM 124 ND1 HIS 17 49.505 19.022 -7.958 1.00 40.29 N ATOM 125 CD2 HIS 17 48.586 18.744 -9.920 1.00 60.68 C ATOM 126 CE1 HIS 17 50.400 19.313 -8.938 1.00 56.69 C ATOM 127 NE2 HIS 17 49.886 19.164 -10.143 1.00 69.97 N ATOM 128 N LYS 18 44.571 18.015 -6.640 1.00 21.04 N ATOM 129 CA LYS 18 43.325 17.527 -6.108 1.00 20.95 C ATOM 130 C LYS 18 43.300 17.713 -4.618 1.00 20.59 C ATOM 131 O LYS 18 44.211 17.275 -3.906 1.00 21.14 O ATOM 132 CB LYS 18 43.114 16.036 -6.457 1.00 22.37 C ATOM 133 CG LYS 18 41.715 15.492 -6.122 1.00 33.90 C ATOM 134 CD LYS 18 41.557 14.015 -6.520 1.00 37.60 C ATOM 135 CE LYS 18 40.157 13.465 -6.260 1.00 50.16 C ATOM 136 NZ LYS 18 40.111 12.037 -6.625 1.00 58.19 N ATOM 137 N ILE 19 42.235 18.388 -4.129 1.00 20.12 N ATOM 138 CA ILE 19 42.008 18.581 -2.723 1.00 20.20 C ATOM 139 C ILE 19 40.797 17.801 -2.285 1.00 20.37 C ATOM 140 O ILE 19 39.714 17.940 -2.853 1.00 20.68 O ATOM 141 CB ILE 19 41.866 20.050 -2.303 1.00 20.48 C ATOM 142 CG1 ILE 19 42.772 21.024 -3.103 1.00 24.46 C ATOM 143 CG2 ILE 19 42.158 20.152 -0.788 1.00 24.71 C ATOM 144 CD1 ILE 19 42.605 22.496 -2.700 1.00 30.04 C ATOM 145 N GLU 20 40.955 16.940 -1.256 1.00 20.44 N ATOM 146 CA GLU 20 39.858 16.182 -0.708 1.00 20.96 C ATOM 147 C GLU 20 39.557 16.636 0.684 1.00 21.05 C ATOM 148 O GLU 20 40.393 16.581 1.585 1.00 21.09 O ATOM 149 CB GLU 20 40.121 14.655 -0.762 1.00 21.91 C ATOM 150 CG GLU 20 40.233 14.128 -2.215 1.00 50.69 C ATOM 151 CD GLU 20 40.368 12.605 -2.292 1.00 48.72 C ATOM 152 OE1 GLU 20 39.431 11.964 -2.839 1.00 33.83 O ATOM 153 OE2 GLU 20 41.406 12.077 -1.819 1.00 71.61 O ATOM 154 N PHE 21 38.318 17.131 0.877 1.00 21.23 N ATOM 155 CA PHE 21 37.891 17.597 2.172 1.00 21.50 C ATOM 156 C PHE 21 37.065 16.513 2.787 1.00 21.40 C ATOM 157 O PHE 21 36.159 15.968 2.152 1.00 22.44 O ATOM 158 CB PHE 21 36.951 18.845 2.160 1.00 21.85 C ATOM 159 CG PHE 21 37.372 20.081 1.408 1.00 23.97 C ATOM 160 CD1 PHE 21 38.626 20.272 0.799 1.00 31.12 C ATOM 161 CD2 PHE 21 36.393 21.083 1.254 1.00 33.27 C ATOM 162 CE1 PHE 21 38.857 21.388 -0.010 1.00 32.89 C ATOM 163 CE2 PHE 21 36.629 22.211 0.463 1.00 36.22 C ATOM 164 CZ PHE 21 37.860 22.349 -0.178 1.00 30.26 C ATOM 165 N GLU 22 37.351 16.216 4.059 1.00 21.16 N ATOM 166 CA GLU 22 36.565 15.323 4.854 1.00 21.57 C ATOM 167 C GLU 22 35.917 16.115 5.918 1.00 21.19 C ATOM 168 O GLU 22 36.565 16.721 6.776 1.00 21.52 O ATOM 169 CB GLU 22 37.463 14.234 5.490 1.00 22.83 C ATOM 170 CG GLU 22 38.068 13.231 4.477 1.00 33.64 C ATOM 171 CD GLU 22 39.028 12.252 5.157 1.00 39.98 C ATOM 172 OE1 GLU 22 40.210 12.197 4.731 1.00 46.83 O ATOM 173 OE2 GLU 22 38.587 11.551 6.104 1.00 65.11 O ATOM 174 N HIS 23 34.585 16.110 5.863 1.00 21.65 N ATOM 175 CA HIS 23 33.800 16.751 6.861 1.00 22.20 C ATOM 176 C HIS 23 33.098 15.702 7.649 1.00 22.09 C ATOM 177 O HIS 23 32.335 14.904 7.103 1.00 22.99 O ATOM 178 CB HIS 23 32.784 17.708 6.213 1.00 23.75 C ATOM 179 CG HIS 23 31.773 18.343 7.129 1.00 30.72 C ATOM 180 ND1 HIS 23 32.041 19.286 8.096 1.00 44.20 N ATOM 181 CD2 HIS 23 30.425 18.155 7.159 1.00 45.15 C ATOM 182 CE1 HIS 23 30.849 19.615 8.656 1.00 49.27 C ATOM 183 NE2 HIS 23 29.842 18.958 8.118 1.00 50.18 N ATOM 184 N GLY 24 33.380 15.678 8.965 1.00 22.33 N ATOM 185 CA GLY 24 32.853 14.651 9.817 1.00 23.44 C ATOM 186 C GLY 24 32.022 15.236 10.895 1.00 24.13 C ATOM 187 O GLY 24 32.529 15.681 11.924 1.00 25.44 O ATOM 188 N THR 25 30.695 15.216 10.672 1.00 24.56 N ATOM 189 CA THR 25 29.697 15.896 11.476 1.00 26.79 C ATOM 190 C THR 25 29.740 15.567 12.941 1.00 23.95 C ATOM 191 O THR 25 29.634 16.450 13.793 1.00 26.77 O ATOM 192 CB THR 25 28.291 15.646 10.955 1.00 32.44 C ATOM 193 OG1 THR 25 28.250 15.795 9.542 1.00 35.60 O ATOM 194 CG2 THR 25 27.272 16.631 11.556 1.00 38.63 C ATOM 195 N THR 26 29.897 14.266 13.268 1.00 25.31 N ATOM 196 CA THR 26 29.772 13.807 14.635 1.00 25.74 C ATOM 197 C THR 26 30.942 14.108 15.535 1.00 28.67 C ATOM 198 O THR 26 30.749 14.275 16.738 1.00 31.38 O ATOM 199 CB THR 26 29.410 12.332 14.758 1.00 31.52 C ATOM 200 OG1 THR 26 30.237 11.497 13.961 1.00 47.31 O ATOM 201 CG2 THR 26 27.956 12.113 14.300 1.00 39.27 C ATOM 202 N SER 27 32.173 14.206 14.988 1.00 31.76 N ATOM 203 CA SER 27 33.317 14.683 15.742 1.00 37.56 C ATOM 204 C SER 27 33.419 16.186 15.636 1.00 35.62 C ATOM 205 O SER 27 33.759 16.858 16.608 1.00 33.89 O ATOM 206 CB SER 27 34.642 14.035 15.256 1.00 45.10 C ATOM 207 OG SER 27 34.813 14.157 13.843 1.00 53.03 O ATOM 208 N GLY 28 33.110 16.748 14.442 1.00 41.23 N ATOM 209 CA GLY 28 32.943 18.179 14.271 1.00 41.73 C ATOM 210 C GLY 28 34.100 18.847 13.614 1.00 42.43 C ATOM 211 O GLY 28 34.024 20.017 13.243 1.00 45.77 O ATOM 212 N LYS 29 35.212 18.110 13.468 1.00 42.56 N ATOM 213 CA LYS 29 36.450 18.654 12.970 1.00 45.80 C ATOM 214 C LYS 29 36.421 18.779 11.465 1.00 40.39 C ATOM 215 O LYS 29 35.671 18.093 10.765 1.00 43.22 O ATOM 216 CB LYS 29 37.664 17.755 13.332 1.00 51.23 C ATOM 217 CG LYS 29 37.681 17.217 14.775 1.00 70.79 C ATOM 218 CD LYS 29 38.873 16.271 15.018 1.00 75.08 C ATOM 219 CE LYS 29 38.717 15.344 16.226 1.00 74.68 C ATOM 220 NZ LYS 29 38.679 16.120 17.480 1.00 82.28 N ATOM 221 N ARG 30 37.288 19.658 10.933 1.00 50.05 N ATOM 222 CA ARG 30 37.477 19.761 9.510 1.00 47.32 C ATOM 223 C ARG 30 38.812 19.145 9.152 1.00 37.37 C ATOM 224 O ARG 30 39.844 19.543 9.697 1.00 50.52 O ATOM 225 CB ARG 30 37.459 21.227 9.005 1.00 54.71 C ATOM 226 CG ARG 30 36.069 21.888 8.833 1.00 68.54 C ATOM 227 CD ARG 30 35.253 22.039 10.127 1.00 77.13 C ATOM 228 NE ARG 30 34.107 22.967 9.870 1.00 84.61 N ATOM 229 CZ ARG 30 33.129 23.205 10.796 1.00 89.14 C ATOM 230 NH1 ARG 30 32.163 24.125 10.509 1.00 89.91 H ATOM 231 NH2 ARG 30 33.114 22.541 11.984 1.00 94.87 H ATOM 232 N VAL 31 38.816 18.158 8.219 1.00 29.09 N ATOM 233 CA VAL 31 40.032 17.483 7.786 1.00 27.37 C ATOM 234 C VAL 31 40.147 17.546 6.283 1.00 26.26 C ATOM 235 O VAL 31 39.163 17.399 5.557 1.00 31.02 O ATOM 236 CB VAL 31 40.195 16.063 8.372 1.00 39.73 C ATOM 237 CG1 VAL 31 38.925 15.578 9.106 1.00 58.25 C ATOM 238 CG2 VAL 31 40.726 15.021 7.360 1.00 56.21 C ATOM 239 N VAL 32 41.376 17.839 5.779 1.00 22.27 N ATOM 240 CA VAL 32 41.587 18.113 4.364 1.00 21.83 C ATOM 241 C VAL 32 42.733 17.285 3.833 1.00 21.49 C ATOM 242 O VAL 32 43.855 17.333 4.345 1.00 22.45 O ATOM 243 CB VAL 32 41.822 19.567 4.044 1.00 23.20 C ATOM 244 CG1 VAL 32 41.911 19.823 2.527 1.00 27.77 C ATOM 245 CG2 VAL 32 40.661 20.371 4.646 1.00 28.82 C ATOM 246 N TYR 33 42.426 16.506 2.771 1.00 21.41 N ATOM 247 CA TYR 33 43.258 15.500 2.155 1.00 22.83 C ATOM 248 C TYR 33 43.729 15.997 0.823 1.00 22.96 C ATOM 249 O TYR 33 42.916 16.288 -0.055 1.00 25.83 O ATOM 250 CB TYR 33 42.408 14.211 2.086 1.00 26.78 C ATOM 251 CG TYR 33 43.151 12.949 1.778 1.00 37.02 C ATOM 252 CD1 TYR 33 43.667 12.165 2.824 1.00 61.09 C ATOM 253 CD2 TYR 33 43.206 12.458 0.464 1.00 47.55 C ATOM 254 CE1 TYR 33 44.213 10.901 2.563 1.00 78.27 C ATOM 255 CE2 TYR 33 43.744 11.191 0.200 1.00 67.91 C ATOM 256 CZ TYR 33 44.242 10.411 1.252 1.00 78.87 C ATOM 257 OH TYR 33 44.769 9.129 0.996 1.00 90.65 H ATOM 258 N VAL 34 45.063 16.136 0.647 1.00 21.53 N ATOM 259 CA VAL 34 45.600 16.654 -0.591 1.00 23.22 C ATOM 260 C VAL 34 46.572 15.678 -1.167 1.00 22.10 C ATOM 261 O VAL 34 47.431 15.155 -0.466 1.00 30.91 O ATOM 262 CB VAL 34 46.213 18.052 -0.457 1.00 29.68 C ATOM 263 CG1 VAL 34 47.562 18.049 0.294 1.00 41.88 C ATOM 264 CG2 VAL 34 46.352 18.711 -1.845 1.00 57.00 C ATOM 265 N ASP 35 46.431 15.344 -2.467 1.00 25.29 N ATOM 266 CA ASP 35 47.024 14.168 -3.072 1.00 24.63 C ATOM 267 C ASP 35 46.799 12.862 -2.292 1.00 28.42 C ATOM 268 O ASP 35 45.740 12.255 -2.436 1.00 42.34 O ATOM 269 CB ASP 35 48.502 14.416 -3.569 1.00 33.19 C ATOM 270 CG ASP 35 49.541 14.891 -2.554 1.00 41.32 C ATOM 271 OD1 ASP 35 49.987 14.036 -1.743 1.00 46.44 O ATOM 272 OD2 ASP 35 49.933 16.084 -2.622 1.00 52.37 O ATOM 273 N GLY 36 47.743 12.423 -1.435 1.00 34.94 N ATOM 274 CA GLY 36 47.438 11.452 -0.398 1.00 40.49 C ATOM 275 C GLY 36 48.162 11.842 0.866 1.00 31.05 C ATOM 276 O GLY 36 48.584 10.993 1.648 1.00 32.54 O ATOM 277 N LYS 37 48.321 13.166 1.085 1.00 43.64 N ATOM 278 CA LYS 37 48.982 13.765 2.220 1.00 64.02 C ATOM 279 C LYS 37 47.931 14.535 3.020 1.00 52.68 C ATOM 280 O LYS 37 46.978 15.102 2.478 1.00 60.15 O ATOM 281 CB LYS 37 50.104 14.727 1.752 1.00 82.81 C ATOM 282 CG LYS 37 50.995 15.314 2.860 1.00 93.36 C ATOM 283 CD LYS 37 52.053 16.280 2.296 1.00 97.90 C ATOM 284 CE LYS 37 52.984 16.887 3.348 1.00 98.84 C ATOM 285 NZ LYS 37 53.906 15.860 3.875 1.00 99.58 N ATOM 286 N GLU 38 48.059 14.549 4.364 1.00 38.85 N ATOM 287 CA GLU 38 46.981 14.968 5.235 1.00 35.66 C ATOM 288 C GLU 38 47.195 16.327 5.834 1.00 29.51 C ATOM 289 O GLU 38 47.487 16.475 7.019 1.00 28.35 O ATOM 290 CB GLU 38 46.763 13.915 6.345 1.00 50.37 C ATOM 291 CG GLU 38 46.571 12.484 5.783 1.00 49.15 C ATOM 292 CD GLU 38 46.279 11.462 6.878 1.00 62.34 C ATOM 293 OE1 GLU 38 45.189 10.833 6.809 1.00 64.32 O ATOM 294 OE2 GLU 38 47.144 11.289 7.773 1.00 77.74 O ATOM 295 N GLU 39 47.041 17.374 4.999 1.00 29.19 N ATOM 296 CA GLU 39 47.444 18.712 5.359 1.00 27.98 C ATOM 297 C GLU 39 46.683 19.312 6.500 1.00 27.07 C ATOM 298 O GLU 39 47.288 19.641 7.524 1.00 32.16 O ATOM 299 CB GLU 39 47.474 19.631 4.102 1.00 33.79 C ATOM 300 CG GLU 39 46.158 19.861 3.311 1.00 40.99 C ATOM 301 CD GLU 39 46.344 20.807 2.116 1.00 45.20 C ATOM 302 OE1 GLU 39 47.512 21.116 1.771 1.00 51.33 O ATOM 303 OE2 GLU 39 45.302 21.205 1.528 1.00 67.36 O ATOM 304 N ILE 40 45.334 19.394 6.418 1.00 24.56 N ATOM 305 CA ILE 40 44.591 19.722 7.611 1.00 23.87 C ATOM 306 C ILE 40 44.265 18.404 8.267 1.00 23.73 C ATOM 307 O ILE 40 43.209 17.803 8.057 1.00 24.81 O ATOM 308 CB ILE 40 43.351 20.603 7.470 1.00 24.49 C ATOM 309 CG1 ILE 40 43.686 22.059 7.060 1.00 30.55 C ATOM 310 CG2 ILE 40 42.576 20.708 8.810 1.00 28.18 C ATOM 311 CD1 ILE 40 44.142 22.296 5.620 1.00 38.72 C ATOM 312 N ARG 41 45.269 17.960 9.050 1.00 23.98 N ATOM 313 CA ARG 41 45.215 16.926 10.047 1.00 24.48 C ATOM 314 C ARG 41 46.564 16.890 10.701 1.00 22.06 C ATOM 315 O ARG 41 46.647 16.990 11.925 1.00 24.42 O ATOM 316 CB ARG 41 44.839 15.518 9.500 1.00 29.19 C ATOM 317 CG ARG 41 44.647 14.463 10.607 1.00 47.36 C ATOM 318 CD ARG 41 43.359 13.632 10.472 1.00 53.87 C ATOM 319 NE ARG 41 43.466 12.688 9.312 1.00 53.08 N ATOM 320 CZ ARG 41 42.435 11.854 8.970 1.00 61.68 C ATOM 321 NH1 ARG 41 41.258 11.905 9.653 1.00 69.18 H ATOM 322 NH2 ARG 41 42.600 10.965 7.948 1.00 76.22 H ATOM 323 N LYS 42 47.663 16.777 9.903 1.00 22.34 N ATOM 324 CA LYS 42 48.987 16.720 10.490 1.00 23.41 C ATOM 325 C LYS 42 49.682 18.059 10.566 1.00 22.10 C ATOM 326 O LYS 42 49.054 19.116 10.632 1.00 23.85 O ATOM 327 CB LYS 42 49.870 15.599 9.832 1.00 29.24 C ATOM 328 CG LYS 42 50.418 15.797 8.404 1.00 33.03 C ATOM 329 CD LYS 42 51.399 14.685 7.977 1.00 39.28 C ATOM 330 CE LYS 42 52.754 14.742 8.689 1.00 48.55 C ATOM 331 NZ LYS 42 53.616 13.640 8.218 1.00 53.64 N ATOM 332 N GLU 43 51.032 18.023 10.614 1.00 23.82 N ATOM 333 CA GLU 43 51.940 19.103 10.902 1.00 25.74 C ATOM 334 C GLU 43 51.682 20.385 10.158 1.00 24.09 C ATOM 335 O GLU 43 51.868 21.468 10.707 1.00 27.15 O ATOM 336 CB GLU 43 53.394 18.628 10.646 1.00 29.44 C ATOM 337 CG GLU 43 54.496 19.623 11.096 1.00 37.99 C ATOM 338 CD GLU 43 55.905 19.082 10.837 1.00 40.28 C ATOM 339 OE1 GLU 43 56.655 18.899 11.829 1.00 48.45 O ATOM 340 OE2 GLU 43 56.235 18.853 9.644 1.00 52.82 O ATOM 341 N TRP 44 51.194 20.284 8.904 1.00 22.11 N ATOM 342 CA TRP 44 50.831 21.417 8.095 1.00 25.15 C ATOM 343 C TRP 44 49.811 22.351 8.734 1.00 24.49 C ATOM 344 O TRP 44 49.888 23.572 8.579 1.00 28.06 O ATOM 345 CB TRP 44 50.337 20.933 6.704 1.00 31.55 C ATOM 346 CG TRP 44 50.414 21.893 5.514 1.00 31.40 C ATOM 347 CD1 TRP 44 51.433 21.994 4.604 1.00 48.57 C ATOM 348 CD2 TRP 44 49.336 22.708 4.999 1.00 49.33 C ATOM 349 NE1 TRP 44 51.054 22.787 3.542 1.00 58.37 N ATOM 350 CE2 TRP 44 49.766 23.220 3.754 1.00 55.28 C ATOM 351 CE3 TRP 44 48.058 22.991 5.487 1.00 71.60 C ATOM 352 CZ2 TRP 44 48.927 24.006 2.970 1.00 72.40 C ATOM 353 CZ3 TRP 44 47.221 23.790 4.695 1.00 84.62 C ATOM 354 CH2 TRP 44 47.641 24.283 3.452 1.00 83.25 H ATOM 355 N MET 45 48.876 21.788 9.525 1.00 22.97 N ATOM 356 CA MET 45 47.884 22.549 10.233 1.00 25.13 C ATOM 357 C MET 45 48.415 23.322 11.389 1.00 24.57 C ATOM 358 O MET 45 48.069 24.485 11.587 1.00 24.03 O ATOM 359 CB MET 45 46.760 21.587 10.712 1.00 28.11 C ATOM 360 CG MET 45 45.409 22.217 11.133 1.00 41.16 C ATOM 361 SD MET 45 45.340 23.195 12.673 1.00 66.01 S ATOM 362 CE MET 45 45.845 21.878 13.804 1.00 65.84 C ATOM 363 N PHE 46 49.305 22.672 12.170 1.00 25.90 N ATOM 364 CA PHE 46 49.978 23.298 13.282 1.00 26.46 C ATOM 365 C PHE 46 50.996 24.336 12.787 1.00 26.77 C ATOM 366 O PHE 46 51.376 25.231 13.541 1.00 28.39 O ATOM 367 CB PHE 46 50.675 22.243 14.177 1.00 29.11 C ATOM 368 CG PHE 46 49.631 21.435 14.908 1.00 30.82 C ATOM 369 CD1 PHE 46 49.234 20.167 14.447 1.00 34.57 C ATOM 370 CD2 PHE 46 49.024 21.958 16.063 1.00 36.36 C ATOM 371 CE1 PHE 46 48.256 19.432 15.130 1.00 38.23 C ATOM 372 CE2 PHE 46 48.050 21.225 16.753 1.00 40.48 C ATOM 373 CZ PHE 46 47.670 19.961 16.288 1.00 38.64 C ATOM 374 N LYS 47 51.410 24.261 11.489 1.00 26.87 N ATOM 375 CA LYS 47 52.169 25.300 10.823 1.00 28.57 C ATOM 376 C LYS 47 51.345 26.450 10.282 1.00 30.01 C ATOM 377 O LYS 47 51.376 27.550 10.841 1.00 30.37 O ATOM 378 CB LYS 47 53.084 24.745 9.694 1.00 29.74 C ATOM 379 CG LYS 47 54.297 23.930 10.190 1.00 42.44 C ATOM 380 CD LYS 47 55.417 24.772 10.829 1.00 57.72 C ATOM 381 CE LYS 47 56.631 23.929 11.224 1.00 75.16 C ATOM 382 NZ LYS 47 57.672 24.795 11.811 1.00 89.09 N ATOM 383 N LEU 48 50.598 26.252 9.171 1.00 32.26 N ATOM 384 CA LEU 48 49.900 27.347 8.506 1.00 34.38 C ATOM 385 C LEU 48 48.606 27.671 9.212 1.00 33.77 C ATOM 386 O LEU 48 47.544 27.767 8.595 1.00 35.05 O ATOM 387 CB LEU 48 49.592 27.018 7.022 1.00 37.49 C ATOM 388 CG LEU 48 50.827 26.712 6.146 1.00 41.23 C ATOM 389 CD1 LEU 48 51.829 27.876 6.088 1.00 58.96 C ATOM 390 CD2 LEU 48 50.375 26.337 4.729 1.00 52.34 C ATOM 391 N VAL 49 48.674 27.876 10.545 1.00 32.76 N ATOM 392 CA VAL 49 47.504 28.186 11.330 1.00 32.67 C ATOM 393 C VAL 49 47.055 29.627 11.072 1.00 30.28 C ATOM 394 O VAL 49 47.829 30.585 11.155 1.00 30.59 O ATOM 395 CB VAL 49 47.679 27.851 12.815 1.00 35.58 C ATOM 396 CG1 VAL 49 48.803 28.664 13.490 1.00 52.82 C ATOM 397 CG2 VAL 49 46.328 27.985 13.553 1.00 51.15 C ATOM 398 N GLY 50 45.771 29.807 10.660 1.00 28.85 N ATOM 399 CA GLY 50 45.272 31.055 10.100 1.00 27.00 C ATOM 400 C GLY 50 45.737 31.270 8.712 1.00 25.49 C ATOM 401 O GLY 50 45.181 30.720 7.760 1.00 25.88 O ATOM 402 N LYS 51 46.785 32.115 8.609 1.00 24.25 N ATOM 403 CA LYS 51 47.516 32.460 7.415 1.00 23.59 C ATOM 404 C LYS 51 46.741 33.200 6.344 1.00 22.98 C ATOM 405 O LYS 51 47.156 34.274 5.915 1.00 23.38 O ATOM 406 CB LYS 51 48.201 31.201 6.805 1.00 25.11 C ATOM 407 CG LYS 51 49.256 31.470 5.714 1.00 30.91 C ATOM 408 CD LYS 51 50.529 32.159 6.233 1.00 45.08 C ATOM 409 CE LYS 51 51.626 32.257 5.172 1.00 55.68 C ATOM 410 NZ LYS 51 52.807 32.943 5.736 1.00 56.47 N ATOM 411 N GLU 52 45.613 32.602 5.908 1.00 22.97 N ATOM 412 CA GLU 52 44.853 32.870 4.711 1.00 23.97 C ATOM 413 C GLU 52 45.582 32.312 3.501 1.00 21.39 C ATOM 414 O GLU 52 46.419 32.962 2.878 1.00 23.53 O ATOM 415 CB GLU 52 44.465 34.355 4.463 1.00 28.49 C ATOM 416 CG GLU 52 43.632 34.953 5.622 1.00 36.41 C ATOM 417 CD GLU 52 43.095 36.346 5.297 1.00 46.11 C ATOM 418 OE1 GLU 52 43.920 37.268 5.073 1.00 59.75 O ATOM 419 OE2 GLU 52 41.844 36.494 5.283 1.00 54.51 O ATOM 420 N THR 53 45.290 31.036 3.163 1.00 22.17 N ATOM 421 CA THR 53 46.113 30.267 2.250 1.00 22.98 C ATOM 422 C THR 53 45.644 30.283 0.832 1.00 21.65 C ATOM 423 O THR 53 44.770 29.510 0.449 1.00 21.96 O ATOM 424 CB THR 53 46.363 28.829 2.685 1.00 29.30 C ATOM 425 OG1 THR 53 46.896 28.795 4.002 1.00 39.17 O ATOM 426 CG2 THR 53 47.368 28.100 1.767 1.00 47.68 C ATOM 427 N PHE 54 46.241 31.172 0.010 1.00 22.12 N ATOM 428 CA PHE 54 45.868 31.359 -1.377 1.00 21.81 C ATOM 429 C PHE 54 46.523 30.378 -2.313 1.00 21.93 C ATOM 430 O PHE 54 47.746 30.225 -2.348 1.00 22.87 O ATOM 431 CB PHE 54 46.242 32.771 -1.914 1.00 22.71 C ATOM 432 CG PHE 54 45.455 33.880 -1.266 1.00 24.29 C ATOM 433 CD1 PHE 54 45.879 34.457 -0.059 1.00 25.89 C ATOM 434 CD2 PHE 54 44.307 34.396 -1.892 1.00 25.83 C ATOM 435 CE1 PHE 54 45.158 35.502 0.530 1.00 28.81 C ATOM 436 CE2 PHE 54 43.589 35.455 -1.315 1.00 28.60 C ATOM 437 CZ PHE 54 44.012 36.004 -0.100 1.00 30.03 C ATOM 438 N TYR 55 45.683 29.732 -3.142 1.00 22.56 N ATOM 439 CA TYR 55 46.130 28.974 -4.267 1.00 23.28 C ATOM 440 C TYR 55 46.152 29.803 -5.514 1.00 23.02 C ATOM 441 O TYR 55 45.121 30.216 -6.040 1.00 24.11 O ATOM 442 CB TYR 55 45.305 27.667 -4.461 1.00 26.58 C ATOM 443 CG TYR 55 45.500 26.637 -3.353 1.00 34.60 C ATOM 444 CD1 TYR 55 46.573 26.656 -2.432 1.00 55.45 C ATOM 445 CD2 TYR 55 44.589 25.566 -3.276 1.00 49.61 C ATOM 446 CE1 TYR 55 46.719 25.641 -1.476 1.00 69.85 C ATOM 447 CE2 TYR 55 44.738 24.547 -2.324 1.00 64.98 C ATOM 448 CZ TYR 55 45.811 24.584 -1.429 1.00 68.62 C ATOM 449 OH TYR 55 45.999 23.571 -0.468 1.00 82.10 H ATOM 450 N VAL 56 47.381 30.076 -5.998 1.00 23.35 N ATOM 451 CA VAL 56 47.646 30.876 -7.171 1.00 25.34 C ATOM 452 C VAL 56 47.559 29.990 -8.370 1.00 30.32 C ATOM 453 O VAL 56 47.942 28.818 -8.339 1.00 29.73 O ATOM 454 CB VAL 56 49.000 31.579 -7.070 1.00 30.30 C ATOM 455 CG1 VAL 56 49.203 32.566 -8.240 1.00 36.62 C ATOM 456 CG2 VAL 56 49.088 32.343 -5.728 1.00 33.28 C ATOM 457 N GLY 57 47.011 30.532 -9.467 1.00 39.61 N ATOM 458 CA GLY 57 46.871 29.729 -10.644 1.00 48.96 C ATOM 459 C GLY 57 46.835 30.616 -11.820 1.00 42.67 C ATOM 460 O GLY 57 47.348 31.732 -11.806 1.00 41.46 O ATOM 461 N ALA 58 46.203 30.123 -12.896 1.00 43.67 N ATOM 462 CA ALA 58 46.091 30.885 -14.104 1.00 42.27 C ATOM 463 C ALA 58 45.136 32.053 -13.980 1.00 34.09 C ATOM 464 O ALA 58 45.447 33.179 -14.373 1.00 41.00 O ATOM 465 CB ALA 58 45.639 29.964 -15.258 1.00 52.52 C ATOM 466 N ALA 59 43.946 31.802 -13.395 1.00 30.38 N ATOM 467 CA ALA 59 42.928 32.804 -13.203 1.00 35.06 C ATOM 468 C ALA 59 43.176 33.630 -11.957 1.00 29.40 C ATOM 469 O ALA 59 42.353 33.677 -11.043 1.00 29.71 O ATOM 470 CB ALA 59 41.544 32.130 -13.115 1.00 47.87 C ATOM 471 N LYS 60 44.346 34.305 -11.928 1.00 28.36 N ATOM 472 CA LYS 60 44.828 35.122 -10.834 1.00 28.63 C ATOM 473 C LYS 60 45.025 34.306 -9.577 1.00 26.24 C ATOM 474 O LYS 60 45.923 33.459 -9.496 1.00 29.89 O ATOM 475 CB LYS 60 43.926 36.387 -10.672 1.00 32.74 C ATOM 476 CG LYS 60 44.548 37.538 -9.862 1.00 56.26 C ATOM 477 CD LYS 60 43.657 38.793 -9.850 1.00 74.71 C ATOM 478 CE LYS 60 44.285 39.961 -9.091 1.00 82.35 C ATOM 479 NZ LYS 60 43.382 41.127 -9.137 1.00 83.38 N ATOM 480 N THR 61 44.178 34.534 -8.563 1.00 24.68 N ATOM 481 CA THR 61 44.176 33.773 -7.351 1.00 24.39 C ATOM 482 C THR 61 42.930 32.936 -7.299 1.00 23.14 C ATOM 483 O THR 61 41.839 33.415 -7.601 1.00 23.63 O ATOM 484 CB THR 61 44.254 34.616 -6.082 1.00 26.84 C ATOM 485 OG1 THR 61 43.373 35.736 -6.102 1.00 40.11 O ATOM 486 CG2 THR 61 45.686 35.161 -5.923 1.00 39.05 C ATOM 487 N LYS 62 43.076 31.640 -6.927 1.00 23.24 N ATOM 488 CA LYS 62 42.013 30.688 -7.092 1.00 23.18 C ATOM 489 C LYS 62 41.329 30.313 -5.797 1.00 21.92 C ATOM 490 O LYS 62 40.272 30.846 -5.464 1.00 25.54 O ATOM 491 CB LYS 62 42.510 29.467 -7.907 1.00 26.80 C ATOM 492 CG LYS 62 41.364 28.750 -8.636 1.00 59.67 C ATOM 493 CD LYS 62 41.869 27.784 -9.717 1.00 70.43 C ATOM 494 CE LYS 62 40.759 27.111 -10.528 1.00 88.00 C ATOM 495 NZ LYS 62 40.029 28.095 -11.350 1.00 92.35 N ATOM 496 N ALA 63 41.890 29.377 -5.018 1.00 21.32 N ATOM 497 CA ALA 63 41.228 28.906 -3.826 1.00 20.78 C ATOM 498 C ALA 63 41.950 29.362 -2.588 1.00 20.90 C ATOM 499 O ALA 63 43.169 29.265 -2.504 1.00 23.58 O ATOM 500 CB ALA 63 41.150 27.379 -3.804 1.00 24.06 C ATOM 501 N THR 64 41.202 29.877 -1.594 1.00 20.22 N ATOM 502 CA THR 64 41.753 30.432 -0.376 1.00 20.98 C ATOM 503 C THR 64 41.381 29.563 0.779 1.00 20.56 C ATOM 504 O THR 64 40.211 29.277 1.019 1.00 20.17 O ATOM 505 CB THR 64 41.294 31.855 -0.081 1.00 22.62 C ATOM 506 OG1 THR 64 41.441 32.685 -1.225 1.00 28.53 O ATOM 507 CG2 THR 64 42.104 32.493 1.062 1.00 30.76 C ATOM 508 N ILE 65 42.392 29.114 1.527 1.00 21.16 N ATOM 509 CA ILE 65 42.214 28.236 2.650 1.00 21.16 C ATOM 510 C ILE 65 42.329 28.994 3.948 1.00 21.63 C ATOM 511 O ILE 65 43.365 29.571 4.266 1.00 22.60 O ATOM 512 CB ILE 65 43.206 27.071 2.560 1.00 21.63 C ATOM 513 CG1 ILE 65 42.738 26.062 1.486 1.00 22.01 C ATOM 514 CG2 ILE 65 43.496 26.413 3.931 1.00 21.90 C ATOM 515 CD1 ILE 65 43.775 24.989 1.140 1.00 23.12 C ATOM 516 N ASN 66 41.249 29.012 4.749 1.00 21.39 N ATOM 517 CA ASN 66 41.248 29.626 6.049 1.00 22.50 C ATOM 518 C ASN 66 41.209 28.549 7.110 1.00 23.77 C ATOM 519 O ASN 66 40.502 27.553 6.977 1.00 25.32 O ATOM 520 CB ASN 66 40.062 30.630 6.147 1.00 25.81 C ATOM 521 CG ASN 66 40.089 31.463 7.431 1.00 37.13 C ATOM 522 OD1 ASN 66 41.146 31.663 8.033 1.00 54.06 O ATOM 523 ND2 ASN 66 38.902 31.971 7.856 1.00 56.95 N ATOM 524 N ILE 67 42.014 28.712 8.180 1.00 24.97 N ATOM 525 CA ILE 67 42.167 27.685 9.194 1.00 27.98 C ATOM 526 C ILE 67 41.868 28.280 10.544 1.00 31.69 C ATOM 527 O ILE 67 42.561 29.182 11.015 1.00 30.46 O ATOM 528 CB ILE 67 43.555 27.052 9.166 1.00 30.92 C ATOM 529 CG1 ILE 67 43.805 26.334 7.815 1.00 39.81 C ATOM 530 CG2 ILE 67 43.764 26.079 10.348 1.00 46.61 C ATOM 531 CD1 ILE 67 45.239 25.832 7.634 1.00 46.61 C ATOM 532 N ASP 68 40.815 27.753 11.208 1.00 37.88 N ATOM 533 CA ASP 68 40.399 28.151 12.526 1.00 43.97 C ATOM 534 C ASP 68 40.626 27.002 13.488 1.00 54.40 C ATOM 535 O ASP 68 40.468 25.825 13.158 1.00 59.92 O ATOM 536 CB ASP 68 38.904 28.562 12.533 1.00 55.19 C ATOM 537 CG ASP 68 38.695 29.841 11.732 1.00 58.89 C ATOM 538 OD1 ASP 68 37.987 29.782 10.694 1.00 58.12 O ATOM 539 OD2 ASP 68 39.215 30.896 12.178 1.00 71.03 O ATOM 540 N ALA 69 41.038 27.337 14.725 1.00 61.77 N ATOM 541 CA ALA 69 41.536 26.346 15.639 1.00 73.88 C ATOM 542 C ALA 69 40.497 25.630 16.447 1.00 77.74 C ATOM 543 O ALA 69 40.341 24.413 16.355 1.00 74.86 O ATOM 544 CB ALA 69 42.585 27.000 16.565 1.00 74.04 C ATOM 545 N ILE 70 39.783 26.410 17.276 1.00 87.51 N ATOM 546 CA ILE 70 38.708 25.997 18.147 1.00 90.70 C ATOM 547 C ILE 70 39.094 25.033 19.250 1.00 81.73 C ATOM 548 O ILE 70 39.188 25.423 20.412 1.00 81.87 O ATOM 549 CB ILE 70 37.436 25.544 17.395 1.00 95.62 C ATOM 550 CG1 ILE 70 37.053 26.535 16.259 1.00 97.99 C ATOM 551 CG2 ILE 70 36.261 25.354 18.386 1.00 96.76 C ATOM 552 CD1 ILE 70 35.817 26.116 15.454 1.00 99.29 C ATOM 553 N SER 71 39.291 23.750 18.919 1.00 75.44 N ATOM 554 CA SER 71 39.530 22.674 19.867 1.00 63.78 C ATOM 555 C SER 71 39.794 21.470 19.002 1.00 53.68 C ATOM 556 O SER 71 40.822 20.805 19.123 1.00 64.39 O ATOM 557 CB SER 71 38.341 22.346 20.816 1.00 71.07 C ATOM 558 OG SER 71 38.308 23.257 21.909 1.00 80.54 O ATOM 559 N GLY 72 38.862 21.213 18.053 1.00 49.98 N ATOM 560 CA GLY 72 39.080 20.345 16.913 1.00 48.29 C ATOM 561 C GLY 72 39.011 21.228 15.712 1.00 44.22 C ATOM 562 O GLY 72 38.157 22.112 15.639 1.00 48.78 O ATOM 563 N PHE 73 39.950 21.034 14.768 1.00 42.70 N ATOM 564 CA PHE 73 40.297 22.055 13.803 1.00 44.34 C ATOM 565 C PHE 73 39.248 22.291 12.736 1.00 37.23 C ATOM 566 O PHE 73 38.662 21.353 12.186 1.00 41.62 O ATOM 567 CB PHE 73 41.632 21.756 13.049 1.00 50.32 C ATOM 568 CG PHE 73 42.650 21.067 13.920 1.00 62.05 C ATOM 569 CD1 PHE 73 43.026 21.597 15.168 1.00 73.55 C ATOM 570 CD2 PHE 73 43.205 19.845 13.504 1.00 74.28 C ATOM 571 CE1 PHE 73 43.905 20.896 16.002 1.00 85.34 C ATOM 572 CE2 PHE 73 44.097 19.148 14.329 1.00 85.29 C ATOM 573 CZ PHE 73 44.435 19.669 15.583 1.00 88.19 C ATOM 574 N ALA 74 39.028 23.583 12.405 1.00 30.68 N ATOM 575 CA ALA 74 38.031 23.993 11.454 1.00 26.75 C ATOM 576 C ALA 74 38.651 24.691 10.289 1.00 25.09 C ATOM 577 O ALA 74 39.272 25.748 10.385 1.00 26.65 O ATOM 578 CB ALA 74 36.994 24.907 12.129 1.00 29.23 C ATOM 579 N TYR 75 38.483 24.084 9.117 1.00 24.07 N ATOM 580 CA TYR 75 39.053 24.578 7.908 1.00 23.41 C ATOM 581 C TYR 75 37.947 25.182 7.100 1.00 23.19 C ATOM 582 O TYR 75 36.895 24.579 6.864 1.00 25.56 O ATOM 583 CB TYR 75 39.728 23.383 7.182 1.00 26.40 C ATOM 584 CG TYR 75 39.938 23.508 5.698 1.00 52.14 C ATOM 585 CD1 TYR 75 38.987 22.979 4.804 1.00 69.78 C ATOM 586 CD2 TYR 75 41.141 24.012 5.194 1.00 74.55 C ATOM 587 CE1 TYR 75 39.269 22.896 3.433 1.00 88.27 C ATOM 588 CE2 TYR 75 41.437 23.889 3.832 1.00 90.50 C ATOM 589 CZ TYR 75 40.515 23.319 2.956 1.00 93.15 C ATOM 590 OH TYR 75 40.898 23.093 1.623 1.00 98.03 H ATOM 591 N GLU 76 38.206 26.413 6.646 1.00 22.00 N ATOM 592 CA GLU 76 37.305 27.131 5.819 1.00 23.30 C ATOM 593 C GLU 76 37.943 27.399 4.476 1.00 22.02 C ATOM 594 O GLU 76 38.968 28.065 4.364 1.00 22.17 O ATOM 595 CB GLU 76 36.850 28.444 6.505 1.00 25.47 C ATOM 596 CG GLU 76 35.900 29.330 5.660 1.00 39.58 C ATOM 597 CD GLU 76 35.557 30.638 6.376 1.00 55.61 C ATOM 598 OE1 GLU 76 34.350 30.859 6.655 1.00 68.66 O ATOM 599 OE2 GLU 76 36.505 31.425 6.640 1.00 70.29 O ATOM 600 N TYR 77 37.332 26.867 3.405 1.00 21.91 N ATOM 601 CA TYR 77 37.820 27.003 2.054 1.00 21.43 C ATOM 602 C TYR 77 37.031 28.096 1.377 1.00 21.36 C ATOM 603 O TYR 77 35.800 28.141 1.462 1.00 21.83 O ATOM 604 CB TYR 77 37.588 25.666 1.309 1.00 23.07 C ATOM 605 CG TYR 77 38.278 25.565 -0.021 1.00 24.68 C ATOM 606 CD1 TYR 77 37.558 25.444 -1.221 1.00 35.08 C ATOM 607 CD2 TYR 77 39.673 25.461 -0.051 1.00 31.69 C ATOM 608 CE1 TYR 77 38.228 25.173 -2.425 1.00 37.41 C ATOM 609 CE2 TYR 77 40.347 25.182 -1.243 1.00 32.75 C ATOM 610 CZ TYR 77 39.622 25.025 -2.426 1.00 29.35 C ATOM 611 OH TYR 77 40.309 24.681 -3.600 1.00 32.24 H ATOM 612 N THR 78 37.740 28.990 0.670 1.00 21.06 N ATOM 613 CA THR 78 37.107 29.949 -0.202 1.00 21.27 C ATOM 614 C THR 78 37.678 29.840 -1.570 1.00 20.98 C ATOM 615 O THR 78 38.887 29.931 -1.758 1.00 21.11 O ATOM 616 CB THR 78 37.168 31.390 0.302 1.00 21.67 C ATOM 617 OG1 THR 78 36.463 31.519 1.530 1.00 23.14 O ATOM 618 CG2 THR 78 36.530 32.389 -0.683 1.00 23.99 C ATOM 619 N LEU 79 36.813 29.618 -2.578 1.00 20.68 N ATOM 620 CA LEU 79 37.270 29.391 -3.920 1.00 20.46 C ATOM 621 C LEU 79 36.955 30.557 -4.817 1.00 20.48 C ATOM 622 O LEU 79 35.798 30.911 -5.012 1.00 20.82 O ATOM 623 CB LEU 79 36.673 28.090 -4.501 1.00 20.74 C ATOM 624 CG LEU 79 37.210 27.671 -5.887 1.00 20.50 C ATOM 625 CD1 LEU 79 36.493 26.408 -6.374 1.00 20.33 C ATOM 626 CD2 LEU 79 38.729 27.445 -5.905 1.00 21.70 C ATOM 627 N GLU 80 37.985 31.217 -5.385 1.00 20.33 N ATOM 628 CA GLU 80 37.773 32.403 -6.179 1.00 20.61 C ATOM 629 C GLU 80 37.915 32.066 -7.653 1.00 20.25 C ATOM 630 O GLU 80 38.955 31.584 -8.104 1.00 20.62 O ATOM 631 CB GLU 80 38.796 33.512 -5.818 1.00 22.04 C ATOM 632 CG GLU 80 38.737 33.942 -4.327 1.00 33.24 C ATOM 633 CD GLU 80 39.829 34.934 -3.916 1.00 46.88 C ATOM 634 OE1 GLU 80 39.796 35.342 -2.724 1.00 57.47 O ATOM 635 OE2 GLU 80 40.702 35.283 -4.754 1.00 66.40 O ATOM 636 N ILE 81 36.844 32.318 -8.440 1.00 20.27 N ATOM 637 CA ILE 81 36.809 32.007 -9.862 1.00 20.54 C ATOM 638 C ILE 81 36.384 33.260 -10.571 1.00 20.77 C ATOM 639 O ILE 81 35.355 33.851 -10.245 1.00 21.36 O ATOM 640 CB ILE 81 35.840 30.860 -10.192 1.00 21.64 C ATOM 641 CG1 ILE 81 36.115 29.564 -9.379 1.00 26.62 C ATOM 642 CG2 ILE 81 35.834 30.564 -11.711 1.00 26.03 C ATOM 643 CD1 ILE 81 37.451 28.866 -9.677 1.00 46.67 C ATOM 644 N ASN 82 37.199 33.722 -11.550 1.00 21.09 N ATOM 645 CA ASN 82 36.955 34.922 -12.335 1.00 22.12 C ATOM 646 C ASN 82 36.728 36.176 -11.523 1.00 22.01 C ATOM 647 O ASN 82 35.998 37.081 -11.922 1.00 22.71 O ATOM 648 CB ASN 82 35.775 34.733 -13.338 1.00 24.00 C ATOM 649 CG ASN 82 36.097 33.635 -14.352 1.00 31.30 C ATOM 650 OD1 ASN 82 37.245 33.211 -14.519 1.00 39.86 O ATOM 651 ND2 ASN 82 35.047 33.162 -15.072 1.00 46.01 N ATOM 652 N GLY 83 37.379 36.237 -10.346 1.00 21.83 N ATOM 653 CA GLY 83 37.226 37.345 -9.437 1.00 22.67 C ATOM 654 C GLY 83 36.324 37.072 -8.283 1.00 22.81 C ATOM 655 O GLY 83 36.431 37.730 -7.251 1.00 23.71 O ATOM 656 N LYS 84 35.384 36.121 -8.439 1.00 22.39 N ATOM 657 CA LYS 84 34.286 35.994 -7.516 1.00 22.99 C ATOM 658 C LYS 84 34.445 34.853 -6.552 1.00 21.97 C ATOM 659 O LYS 84 34.881 33.757 -6.908 1.00 21.11 O ATOM 660 CB LYS 84 32.940 35.820 -8.263 1.00 24.09 C ATOM 661 CG LYS 84 32.612 36.991 -9.207 1.00 34.18 C ATOM 662 CD LYS 84 31.188 36.937 -9.788 1.00 46.74 C ATOM 663 CE LYS 84 30.936 35.755 -10.726 1.00 59.54 C ATOM 664 NZ LYS 84 29.560 35.834 -11.257 1.00 78.58 N ATOM 665 N SER 85 34.069 35.124 -5.283 1.00 22.78 N ATOM 666 CA SER 85 34.244 34.207 -4.184 1.00 22.23 C ATOM 667 C SER 85 33.127 33.204 -4.061 1.00 21.45 C ATOM 668 O SER 85 32.007 33.529 -3.667 1.00 21.81 O ATOM 669 CB SER 85 34.362 34.924 -2.816 1.00 23.21 C ATOM 670 OG SER 85 35.520 35.753 -2.793 1.00 40.48 O ATOM 671 N LEU 86 33.449 31.929 -4.350 1.00 20.83 N ATOM 672 CA LEU 86 32.618 30.790 -4.087 1.00 20.44 C ATOM 673 C LEU 86 32.981 30.273 -2.709 1.00 20.55 C ATOM 674 O LEU 86 34.083 29.773 -2.467 1.00 20.78 O ATOM 675 CB LEU 86 32.826 29.716 -5.189 1.00 20.47 C ATOM 676 CG LEU 86 31.845 28.521 -5.251 1.00 23.17 C ATOM 677 CD1 LEU 86 32.046 27.486 -4.132 1.00 48.61 C ATOM 678 CD2 LEU 86 31.985 27.815 -6.611 1.00 52.72 C ATOM 679 N LYS 87 32.061 30.437 -1.738 1.00 20.86 N ATOM 680 CA LYS 87 32.372 30.178 -0.351 1.00 21.32 C ATOM 681 C LYS 87 32.013 28.779 0.099 1.00 20.83 C ATOM 682 O LYS 87 30.982 28.215 -0.269 1.00 20.92 O ATOM 683 CB LYS 87 31.700 31.221 0.576 1.00 22.72 C ATOM 684 CG LYS 87 32.215 32.653 0.330 1.00 37.04 C ATOM 685 CD LYS 87 31.640 33.680 1.319 1.00 47.15 C ATOM 686 CE LYS 87 32.196 35.088 1.101 1.00 64.16 C ATOM 687 NZ LYS 87 31.610 36.012 2.091 1.00 75.30 N ATOM 688 N LYS 88 32.910 28.222 0.940 1.00 21.18 N ATOM 689 CA LYS 88 32.757 27.011 1.699 1.00 21.33 C ATOM 690 C LYS 88 32.899 25.730 0.908 1.00 21.19 C ATOM 691 O LYS 88 33.752 25.607 0.025 1.00 21.95 O ATOM 692 CB LYS 88 31.498 27.038 2.626 1.00 22.94 C ATOM 693 CG LYS 88 31.539 28.195 3.642 1.00 35.98 C ATOM 694 CD LYS 88 30.431 28.106 4.704 1.00 58.81 C ATOM 695 CE LYS 88 30.527 29.223 5.744 1.00 72.66 C ATOM 696 NZ LYS 88 29.434 29.088 6.724 1.00 86.31 N ATOM 697 N TYR 89 32.133 24.680 1.276 1.00 22.15 N ATOM 698 CA TYR 89 32.429 23.321 0.890 1.00 23.90 C ATOM 699 C TYR 89 31.795 23.024 -0.450 1.00 24.04 C ATOM 700 O TYR 89 30.832 22.273 -0.571 1.00 26.65 O ATOM 701 CB TYR 89 31.956 22.321 1.969 1.00 27.02 C ATOM 702 CG TYR 89 32.569 22.687 3.302 1.00 30.65 C ATOM 703 CD1 TYR 89 33.964 22.647 3.507 1.00 40.27 C ATOM 704 CD2 TYR 89 31.745 23.141 4.346 1.00 39.82 C ATOM 705 CE1 TYR 89 34.522 23.083 4.721 1.00 46.30 C ATOM 706 CE2 TYR 89 32.300 23.573 5.556 1.00 46.14 C ATOM 707 CZ TYR 89 33.686 23.556 5.741 1.00 44.01 C ATOM 708 OH TYR 89 34.209 24.047 6.953 1.00 51.80 H ATOM 709 N MET 90 32.381 23.665 -1.482 1.00 24.46 N ATOM 710 CA MET 90 32.074 23.627 -2.905 1.00 25.99 C ATOM 711 C MET 90 31.046 22.567 -3.424 1.00 31.97 C ATOM 712 O MET 90 29.926 22.991 -3.820 1.00 51.81 O ATOM 713 CB MET 90 33.413 23.489 -3.677 1.00 31.28 C ATOM 714 CG MET 90 33.323 23.662 -5.203 1.00 50.94 C ATOM 715 SD MET 90 34.893 23.284 -6.032 1.00 70.14 S ATOM 716 CE MET 90 34.349 23.858 -7.666 1.00 70.31 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 65.85 61.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 54.33 66.9 118 100.0 118 ARMSMC SURFACE . . . . . . . . 75.90 51.9 108 100.0 108 ARMSMC BURIED . . . . . . . . 46.22 75.7 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.80 53.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 78.27 56.1 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 77.73 59.6 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 84.87 47.7 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 77.24 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.29 50.9 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 63.64 56.5 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 71.13 48.7 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 68.72 54.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 72.58 45.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.10 54.2 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 68.10 54.2 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 60.96 58.8 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 68.40 55.6 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 67.19 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.30 38.5 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 96.30 38.5 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 103.01 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 98.21 36.4 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 85.02 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.86 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.86 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0763 CRMSCA SECONDARY STRUCTURE . . 5.60 59 100.0 59 CRMSCA SURFACE . . . . . . . . 7.39 55 100.0 55 CRMSCA BURIED . . . . . . . . 5.94 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.88 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 5.67 293 100.0 293 CRMSMC SURFACE . . . . . . . . 7.45 269 100.0 269 CRMSMC BURIED . . . . . . . . 5.87 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.37 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 8.35 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 7.13 252 100.0 252 CRMSSC SURFACE . . . . . . . . 8.81 204 100.0 204 CRMSSC BURIED . . . . . . . . 7.73 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.63 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 6.43 488 100.0 488 CRMSALL SURFACE . . . . . . . . 8.10 424 100.0 424 CRMSALL BURIED . . . . . . . . 6.88 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.358 0.636 0.696 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 21.079 0.661 0.715 59 100.0 59 ERRCA SURFACE . . . . . . . . 24.395 0.631 0.694 55 100.0 55 ERRCA BURIED . . . . . . . . 19.156 0.642 0.700 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.688 0.638 0.698 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 21.462 0.662 0.715 293 100.0 293 ERRMC SURFACE . . . . . . . . 24.641 0.631 0.692 269 100.0 269 ERRMC BURIED . . . . . . . . 19.651 0.650 0.706 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 39.097 0.706 0.748 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 39.614 0.708 0.751 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 37.896 0.720 0.760 252 100.0 252 ERRSC SURFACE . . . . . . . . 43.199 0.720 0.758 204 100.0 204 ERRSC BURIED . . . . . . . . 33.592 0.686 0.736 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 30.531 0.670 0.722 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 29.676 0.691 0.738 488 100.0 488 ERRALL SURFACE . . . . . . . . 33.128 0.671 0.722 424 100.0 424 ERRALL BURIED . . . . . . . . 26.760 0.669 0.721 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 3 10 30 77 90 90 DISTCA CA (P) 0.00 3.33 11.11 33.33 85.56 90 DISTCA CA (RMS) 0.00 1.51 2.30 3.54 5.80 DISTCA ALL (N) 2 25 75 229 590 716 716 DISTALL ALL (P) 0.28 3.49 10.47 31.98 82.40 716 DISTALL ALL (RMS) 0.83 1.57 2.29 3.55 6.02 DISTALL END of the results output