####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS423_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS423_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.64 4.64 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 1.68 7.17 LCS_AVERAGE: 15.90 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 74 - 84 0.98 5.28 LCS_AVERAGE: 8.54 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 6 8 90 4 4 6 7 7 8 10 18 36 39 42 48 53 72 74 75 79 86 88 89 LCS_GDT T 2 T 2 6 8 90 4 7 10 19 33 42 51 58 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT D 3 D 3 6 22 90 4 4 15 21 26 34 46 57 66 71 73 76 79 81 84 87 87 88 89 89 LCS_GDT L 4 L 4 6 22 90 4 4 9 11 28 36 50 58 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 5 V 5 10 22 90 4 9 17 28 30 39 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 6 A 6 10 22 90 4 11 22 30 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 7 V 7 10 22 90 4 10 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT W 8 W 8 10 22 90 4 14 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT D 9 D 9 10 22 90 4 14 22 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 10 V 10 10 22 90 4 13 19 28 37 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 11 A 11 10 22 90 4 13 22 28 37 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT L 12 L 12 10 22 90 3 14 22 28 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT S 13 S 13 10 22 90 7 14 19 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT D 14 D 14 10 22 90 3 8 12 27 38 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT G 15 G 15 10 22 90 8 14 22 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 16 V 16 10 22 90 8 14 24 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT H 17 H 17 10 22 90 8 14 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 18 K 18 10 22 90 8 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 19 I 19 10 22 90 8 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 20 E 20 10 22 90 8 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT F 21 F 21 10 22 90 8 14 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 22 E 22 10 22 90 5 13 22 31 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT H 23 H 23 10 22 90 5 13 22 28 31 43 51 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT G 24 G 24 10 22 90 3 13 18 27 33 42 51 62 66 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT T 25 T 25 4 21 90 3 4 4 4 5 9 10 19 30 48 66 74 78 81 83 87 87 88 89 89 LCS_GDT T 26 T 26 4 5 90 3 4 4 10 14 19 30 44 56 64 73 77 80 83 85 87 87 88 89 89 LCS_GDT S 27 S 27 4 12 90 3 6 16 28 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT G 28 G 28 4 12 90 3 4 4 6 19 35 48 58 61 66 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 29 K 29 4 12 90 3 3 8 22 38 45 54 62 66 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT R 30 R 30 7 12 90 5 12 22 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 31 V 31 7 12 90 6 13 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 32 V 32 7 12 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT Y 33 Y 33 7 12 90 7 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 34 V 34 7 12 90 8 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT D 35 D 35 7 12 90 5 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT G 36 G 36 7 12 90 3 9 22 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 37 K 37 4 12 90 4 4 6 24 36 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 38 E 38 4 12 90 4 4 9 26 38 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 39 E 39 5 12 90 7 14 22 30 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 40 I 40 5 12 90 4 7 15 24 38 45 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT R 41 R 41 5 8 90 3 5 7 11 17 21 35 47 56 64 70 77 80 83 85 87 87 88 89 89 LCS_GDT K 42 K 42 5 8 90 3 5 5 11 17 21 27 33 41 51 63 73 80 83 85 87 87 88 89 89 LCS_GDT E 43 E 43 5 8 90 3 5 5 7 9 11 25 29 31 35 40 47 54 67 73 84 87 88 89 89 LCS_GDT W 44 W 44 5 8 90 3 5 5 9 16 21 27 29 39 41 49 62 69 79 85 87 87 88 89 89 LCS_GDT M 45 M 45 5 8 90 3 5 7 11 17 21 27 31 39 41 60 64 77 80 85 87 87 88 89 89 LCS_GDT F 46 F 46 5 8 90 3 5 6 11 17 21 27 31 42 51 63 71 80 83 85 87 87 88 89 89 LCS_GDT K 47 K 47 5 6 90 3 5 6 10 13 21 27 39 48 57 64 72 80 83 85 87 87 88 89 89 LCS_GDT L 48 L 48 7 9 90 3 4 8 8 10 13 17 24 34 39 46 62 72 76 81 85 87 87 89 89 LCS_GDT V 49 V 49 7 10 90 5 6 8 8 14 24 38 45 55 64 70 77 80 83 85 87 87 88 89 89 LCS_GDT G 50 G 50 7 10 90 5 6 11 21 37 44 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 51 K 51 7 10 90 5 6 8 8 13 43 51 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 52 E 52 7 10 90 5 6 8 19 28 39 47 55 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT T 53 T 53 7 10 90 5 6 17 28 30 44 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT F 54 F 54 7 10 90 3 6 11 18 26 36 47 56 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT Y 55 Y 55 7 10 90 3 4 8 28 30 37 48 57 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT V 56 V 56 4 10 90 3 4 7 16 19 30 41 50 61 67 72 77 80 83 85 87 87 88 89 89 LCS_GDT G 57 G 57 4 13 90 3 4 8 15 30 32 43 54 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 58 A 58 4 13 90 3 7 19 28 30 41 50 60 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 59 A 59 4 13 90 3 12 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 60 K 60 10 13 90 3 4 13 21 33 44 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT T 61 T 61 10 13 90 5 13 18 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 62 K 62 10 13 90 5 13 22 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 63 A 63 10 13 90 6 13 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT T 64 T 64 10 13 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 65 I 65 10 13 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT N 66 N 66 10 13 90 4 13 24 32 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 67 I 67 10 13 90 4 15 24 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT D 68 D 68 10 13 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 69 A 69 10 13 90 4 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 70 I 70 5 13 90 3 11 19 27 38 47 53 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT S 71 S 71 4 12 90 3 7 14 21 27 35 44 51 59 64 70 76 80 83 85 87 87 88 89 89 LCS_GDT G 72 G 72 3 12 90 3 3 4 8 11 22 32 43 52 64 70 75 80 83 85 87 87 88 89 89 LCS_GDT F 73 F 73 8 15 90 6 13 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT A 74 A 74 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT Y 75 Y 75 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 76 E 76 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT Y 77 Y 77 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT T 78 T 78 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT L 79 L 79 11 15 90 6 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT E 80 E 80 11 15 90 3 11 23 32 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT I 81 I 81 11 15 90 5 13 21 29 37 46 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT N 82 N 82 11 15 90 5 12 21 28 36 46 52 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT G 83 G 83 11 15 90 5 12 21 28 36 45 52 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 84 K 84 11 15 90 5 12 20 28 36 45 52 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT S 85 S 85 10 15 90 5 9 18 28 36 46 54 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT L 86 L 86 5 15 90 4 5 11 20 26 40 51 62 67 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT K 87 K 87 5 15 90 4 5 6 15 21 27 32 40 54 60 65 74 80 83 85 87 87 88 89 89 LCS_GDT K 88 K 88 5 12 90 4 6 10 17 21 30 46 57 66 71 73 77 80 83 85 87 87 88 89 89 LCS_GDT Y 89 Y 89 4 4 90 3 4 4 5 7 8 27 35 45 61 66 77 80 83 85 87 87 88 89 89 LCS_GDT M 90 M 90 4 4 90 3 4 4 5 7 8 11 25 53 61 73 77 80 83 85 87 87 88 89 89 LCS_AVERAGE LCS_A: 41.48 ( 8.54 15.90 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 15 25 34 39 47 54 62 67 71 73 77 80 83 85 87 87 88 89 89 GDT PERCENT_AT 8.89 16.67 27.78 37.78 43.33 52.22 60.00 68.89 74.44 78.89 81.11 85.56 88.89 92.22 94.44 96.67 96.67 97.78 98.89 98.89 GDT RMS_LOCAL 0.31 0.68 1.06 1.38 1.54 1.90 2.24 2.51 2.76 2.91 3.04 3.32 3.59 3.88 4.11 4.23 4.23 4.38 4.50 4.50 GDT RMS_ALL_AT 6.23 5.02 4.91 4.98 5.03 4.96 4.89 4.91 4.95 4.99 4.95 4.84 4.76 4.68 4.64 4.65 4.65 4.65 4.64 4.64 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: F 21 F 21 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 11.355 0 0.447 1.152 16.758 3.690 1.845 LGA T 2 T 2 4.759 0 0.088 0.121 7.325 49.643 40.068 LGA D 3 D 3 5.177 0 0.106 0.932 9.287 24.286 14.167 LGA L 4 L 4 4.632 0 0.050 0.080 8.477 54.524 33.274 LGA V 5 V 5 3.793 0 0.630 0.974 7.781 40.357 27.007 LGA A 6 A 6 2.058 0 0.024 0.037 2.346 75.357 73.238 LGA V 7 V 7 0.847 0 0.113 0.097 1.514 90.595 85.442 LGA W 8 W 8 1.473 0 0.081 0.864 3.527 79.405 65.952 LGA D 9 D 9 2.329 0 0.051 0.968 5.561 59.524 48.155 LGA V 10 V 10 3.161 0 0.155 1.146 3.829 53.571 51.088 LGA A 11 A 11 3.457 0 0.145 0.134 3.827 48.333 47.333 LGA L 12 L 12 2.988 0 0.126 1.152 4.236 50.119 51.190 LGA S 13 S 13 2.427 0 0.424 0.825 3.107 64.881 63.730 LGA D 14 D 14 3.395 0 0.023 1.150 7.875 53.810 36.250 LGA G 15 G 15 2.311 0 0.155 0.155 2.311 64.762 64.762 LGA V 16 V 16 1.906 0 0.163 1.185 4.362 68.810 62.177 LGA H 17 H 17 1.432 0 0.077 1.126 3.242 77.143 70.714 LGA K 18 K 18 1.472 0 0.274 0.950 6.236 73.214 63.175 LGA I 19 I 19 1.613 0 0.052 0.123 1.813 72.857 77.143 LGA E 20 E 20 1.522 0 0.032 0.294 2.430 72.857 70.159 LGA F 21 F 21 1.655 0 0.051 1.264 5.060 72.857 59.957 LGA E 22 E 22 2.035 0 0.682 1.189 5.908 50.595 56.349 LGA H 23 H 23 3.775 0 0.105 1.009 7.673 45.714 26.571 LGA G 24 G 24 4.062 0 0.482 0.482 5.153 33.214 33.214 LGA T 25 T 25 8.337 0 0.625 0.591 12.109 7.024 4.014 LGA T 26 T 26 5.924 0 0.205 1.251 7.785 25.357 21.633 LGA S 27 S 27 2.829 0 0.479 0.470 3.916 53.810 52.619 LGA G 28 G 28 5.669 0 0.532 0.532 5.867 25.119 25.119 LGA K 29 K 29 3.594 0 0.589 0.865 8.652 43.810 29.206 LGA R 30 R 30 1.889 0 0.266 0.974 10.194 69.286 37.619 LGA V 31 V 31 1.044 0 0.068 0.210 1.599 79.286 82.789 LGA V 32 V 32 1.143 0 0.083 0.083 1.921 85.952 80.340 LGA Y 33 Y 33 1.512 0 0.158 1.264 6.903 75.000 58.175 LGA V 34 V 34 1.409 0 0.045 0.047 2.406 85.952 79.184 LGA D 35 D 35 0.623 0 0.079 0.267 1.717 90.476 89.464 LGA G 36 G 36 1.495 0 0.735 0.735 2.910 73.214 73.214 LGA K 37 K 37 2.724 0 0.481 0.442 7.237 50.714 38.413 LGA E 38 E 38 2.896 0 0.050 0.553 11.006 59.524 30.370 LGA E 39 E 39 2.573 0 0.592 0.911 9.727 66.905 34.286 LGA I 40 I 40 3.320 0 0.069 1.192 5.445 54.048 45.774 LGA R 41 R 41 7.278 0 0.115 1.316 15.787 9.405 3.550 LGA K 42 K 42 8.925 0 0.115 0.460 10.143 2.024 5.238 LGA E 43 E 43 13.676 0 0.052 0.143 20.027 0.000 0.000 LGA W 44 W 44 11.421 0 0.411 1.201 14.600 0.119 0.034 LGA M 45 M 45 11.704 0 0.222 1.242 13.155 0.000 0.000 LGA F 46 F 46 10.539 0 0.615 1.392 12.587 0.000 0.433 LGA K 47 K 47 10.340 0 0.064 0.949 10.422 0.238 0.582 LGA L 48 L 48 12.438 0 0.080 1.343 18.046 0.000 0.000 LGA V 49 V 49 7.073 0 0.098 1.124 8.875 12.857 14.150 LGA G 50 G 50 3.457 0 0.147 0.147 5.593 36.548 36.548 LGA K 51 K 51 3.943 0 0.134 0.853 12.951 45.000 25.291 LGA E 52 E 52 5.268 0 0.180 1.117 11.183 29.048 14.127 LGA T 53 T 53 3.926 0 0.167 0.980 7.994 41.786 32.381 LGA F 54 F 54 5.252 0 0.272 1.225 10.834 27.619 11.991 LGA Y 55 Y 55 5.023 0 0.182 1.522 9.000 25.238 18.254 LGA V 56 V 56 6.123 0 0.060 0.061 9.421 22.738 14.082 LGA G 57 G 57 5.707 0 0.196 0.196 5.894 23.810 23.810 LGA A 58 A 58 4.715 0 0.064 0.060 5.464 41.190 38.190 LGA A 59 A 59 1.053 0 0.357 0.337 2.469 70.952 71.333 LGA K 60 K 60 4.034 0 0.075 0.793 13.187 45.357 24.180 LGA T 61 T 61 2.087 0 0.061 0.099 2.519 62.857 65.986 LGA K 62 K 62 1.727 0 0.145 0.708 5.388 68.929 55.661 LGA A 63 A 63 1.430 0 0.099 0.091 1.716 83.690 81.524 LGA T 64 T 64 0.926 0 0.100 0.091 2.095 79.524 81.633 LGA I 65 I 65 1.519 0 0.048 0.550 2.883 75.000 73.036 LGA N 66 N 66 2.332 0 0.157 0.875 3.489 62.857 61.012 LGA I 67 I 67 2.157 0 0.057 0.109 2.282 66.786 65.774 LGA D 68 D 68 1.929 0 0.043 0.337 2.865 70.833 67.857 LGA A 69 A 69 1.390 0 0.049 0.056 2.489 72.976 72.952 LGA I 70 I 70 3.268 0 0.287 1.098 5.934 52.262 41.429 LGA S 71 S 71 7.346 0 0.321 0.735 9.466 9.286 7.222 LGA G 72 G 72 8.036 0 0.068 0.068 8.036 15.595 15.595 LGA F 73 F 73 0.984 0 0.430 1.178 8.900 73.690 42.035 LGA A 74 A 74 2.279 0 0.274 0.330 2.942 66.786 64.857 LGA Y 75 Y 75 1.056 0 0.092 0.249 1.620 81.429 84.484 LGA E 76 E 76 1.092 0 0.108 0.800 2.395 79.286 73.968 LGA Y 77 Y 77 1.584 0 0.059 0.400 3.896 81.548 61.825 LGA T 78 T 78 1.325 0 0.040 0.066 1.790 77.143 75.306 LGA L 79 L 79 0.848 0 0.018 0.062 1.735 85.952 84.881 LGA E 80 E 80 2.037 0 0.057 1.144 7.010 72.976 51.534 LGA I 81 I 81 2.629 0 0.048 0.660 3.295 55.476 57.381 LGA N 82 N 82 3.495 0 0.021 0.820 3.978 46.667 52.083 LGA G 83 G 83 3.763 0 0.054 0.054 3.902 43.333 43.333 LGA K 84 K 84 3.777 0 0.076 0.680 6.933 46.667 34.127 LGA S 85 S 85 3.254 0 0.126 0.669 4.945 43.690 40.556 LGA L 86 L 86 4.171 0 0.019 0.982 8.033 43.571 31.607 LGA K 87 K 87 7.025 0 0.092 0.729 15.539 16.429 7.354 LGA K 88 K 88 5.133 0 0.574 0.912 6.280 22.738 21.058 LGA Y 89 Y 89 6.007 0 0.118 0.165 7.282 26.667 18.810 LGA M 90 M 90 5.680 0 0.071 1.007 9.005 13.571 22.143 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.635 4.576 5.796 49.530 43.293 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 62 2.51 55.000 47.859 2.375 LGA_LOCAL RMSD: 2.510 Number of atoms: 62 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.913 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.635 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.802630 * X + 0.463477 * Y + -0.375466 * Z + 25.044245 Y_new = -0.071868 * X + -0.549743 * Y + -0.832236 * Z + 12.219337 Z_new = -0.592132 * X + 0.694961 * Y + -0.407931 * Z + 9.823491 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.089302 0.633702 2.101590 [DEG: -5.1167 36.3085 120.4122 ] ZXZ: -0.423813 1.990983 -0.705675 [DEG: -24.2827 114.0749 -40.4322 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS423_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS423_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 62 2.51 47.859 4.64 REMARK ---------------------------------------------------------- MOLECULE T0540TS423_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 27.546 11.183 9.635 1.00 8.32 N ATOM 2 CA MET 1 28.326 10.376 10.564 1.00 8.32 C ATOM 3 C MET 1 29.708 10.019 10.019 1.00 8.32 C ATOM 4 O MET 1 30.079 10.400 8.901 1.00 8.32 O ATOM 5 CB MET 1 27.576 9.089 10.915 1.00 8.32 C ATOM 6 CG MET 1 26.238 9.318 11.600 1.00 8.32 C ATOM 7 SD MET 1 26.402 10.158 13.186 1.00 8.32 S ATOM 8 CE MET 1 27.166 8.872 14.173 1.00 8.32 C ATOM 9 N THR 2 30.465 9.282 10.828 1.00 7.15 N ATOM 10 CA THR 2 31.815 8.887 10.461 1.00 7.15 C ATOM 11 C THR 2 31.984 7.939 9.291 1.00 7.15 C ATOM 12 O THR 2 33.107 7.733 8.838 1.00 7.15 O ATOM 13 CB THR 2 32.548 8.221 11.640 1.00 7.15 C ATOM 14 OG1 THR 2 31.829 7.053 12.056 1.00 7.15 O ATOM 15 CG2 THR 2 32.642 9.179 12.818 1.00 7.15 C ATOM 16 N ASP 3 30.901 7.356 8.787 1.00 6.77 N ATOM 17 CA ASP 3 31.039 6.458 7.647 1.00 6.77 C ATOM 18 C ASP 3 30.711 7.165 6.339 1.00 6.77 C ATOM 19 O ASP 3 30.632 6.545 5.277 1.00 6.77 O ATOM 20 CB ASP 3 30.136 5.234 7.817 1.00 6.77 C ATOM 21 CG ASP 3 28.664 5.595 7.848 1.00 6.77 C ATOM 22 OD1 ASP 3 28.347 6.802 7.794 1.00 6.77 O ATOM 23 OD2 ASP 3 27.828 4.671 7.926 1.00 6.77 O ATOM 24 N LEU 4 30.522 8.478 6.429 1.00 4.75 N ATOM 25 CA LEU 4 30.240 9.296 5.260 1.00 4.75 C ATOM 26 C LEU 4 31.556 9.941 4.837 1.00 4.75 C ATOM 27 O LEU 4 32.184 10.650 5.624 1.00 4.75 O ATOM 28 CB LEU 4 29.163 10.334 5.578 1.00 4.75 C ATOM 29 CG LEU 4 28.797 11.300 4.450 1.00 4.75 C ATOM 30 CD1 LEU 4 28.176 10.550 3.281 1.00 4.75 C ATOM 31 CD2 LEU 4 27.848 12.378 4.951 1.00 4.75 C ATOM 32 N VAL 5 31.970 9.698 3.599 1.00 4.39 N ATOM 33 CA VAL 5 33.217 10.258 3.092 1.00 4.39 C ATOM 34 C VAL 5 32.965 10.934 1.756 1.00 4.39 C ATOM 35 O VAL 5 32.495 10.303 0.806 1.00 4.39 O ATOM 36 CB VAL 5 34.306 9.178 2.956 1.00 4.39 C ATOM 37 CG1 VAL 5 35.591 9.782 2.410 1.00 4.39 C ATOM 38 CG2 VAL 5 34.558 8.504 4.296 1.00 4.39 C ATOM 39 N ALA 6 33.283 12.221 1.694 1.00 4.12 N ATOM 40 CA ALA 6 33.081 13.002 0.484 1.00 4.12 C ATOM 41 C ALA 6 34.399 13.489 -0.100 1.00 4.12 C ATOM 42 O ALA 6 35.285 13.948 0.622 1.00 4.12 O ATOM 43 CB ALA 6 32.172 14.189 0.765 1.00 4.12 C ATOM 44 N VAL 7 34.519 13.386 -1.417 1.00 3.95 N ATOM 45 CA VAL 7 35.710 13.836 -2.113 1.00 3.95 C ATOM 46 C VAL 7 35.300 15.029 -2.970 1.00 3.95 C ATOM 47 O VAL 7 34.492 14.903 -3.894 1.00 3.95 O ATOM 48 CB VAL 7 36.333 12.707 -2.954 1.00 3.95 C ATOM 49 CG1 VAL 7 37.556 13.214 -3.702 1.00 3.95 C ATOM 50 CG2 VAL 7 36.696 11.523 -2.071 1.00 3.95 C ATOM 51 N TRP 8 35.876 16.180 -2.640 1.00 3.86 N ATOM 52 CA TRP 8 35.602 17.445 -3.310 1.00 3.86 C ATOM 53 C TRP 8 36.582 17.714 -4.446 1.00 3.86 C ATOM 54 O TRP 8 37.792 17.810 -4.233 1.00 3.86 O ATOM 55 CB TRP 8 35.644 18.602 -2.310 1.00 3.86 C ATOM 56 CG TRP 8 34.527 18.575 -1.313 1.00 3.86 C ATOM 57 CD1 TRP 8 33.635 17.562 -1.109 1.00 3.86 C ATOM 58 CD2 TRP 8 34.181 19.609 -0.382 1.00 3.86 C ATOM 59 NE1 TRP 8 32.755 17.899 -0.110 1.00 3.86 N ATOM 60 CE2 TRP 8 33.071 19.153 0.352 1.00 3.86 C ATOM 61 CE3 TRP 8 34.704 20.875 -0.100 1.00 3.86 C ATOM 62 CZ2 TRP 8 32.473 19.918 1.350 1.00 3.86 C ATOM 63 CZ3 TRP 8 34.106 21.629 0.892 1.00 3.86 C ATOM 64 CH2 TRP 8 33.003 21.151 1.607 1.00 3.86 H ATOM 65 N ASP 9 36.042 17.836 -5.656 1.00 4.18 N ATOM 66 CA ASP 9 36.850 18.105 -6.837 1.00 4.18 C ATOM 67 C ASP 9 37.188 19.595 -6.849 1.00 4.18 C ATOM 68 O ASP 9 36.310 20.455 -6.898 1.00 4.18 O ATOM 69 CB ASP 9 36.105 17.683 -8.104 1.00 4.18 C ATOM 70 CG ASP 9 36.940 17.857 -9.357 1.00 4.18 C ATOM 71 OD1 ASP 9 37.971 18.560 -9.291 1.00 4.18 O ATOM 72 OD2 ASP 9 36.565 17.292 -10.405 1.00 4.18 O ATOM 73 N VAL 10 38.482 19.903 -6.802 1.00 4.56 N ATOM 74 CA VAL 10 38.953 21.283 -6.816 1.00 4.56 C ATOM 75 C VAL 10 39.838 21.494 -8.040 1.00 4.56 C ATOM 76 O VAL 10 40.715 20.686 -8.327 1.00 4.56 O ATOM 77 CB VAL 10 39.711 21.634 -5.522 1.00 4.56 C ATOM 78 CG1 VAL 10 40.898 20.701 -5.330 1.00 4.56 C ATOM 79 CG2 VAL 10 40.168 23.084 -5.548 1.00 4.56 C ATOM 80 N ALA 11 39.594 22.590 -8.756 1.00 5.06 N ATOM 81 CA ALA 11 40.372 22.945 -9.930 1.00 5.06 C ATOM 82 C ALA 11 41.124 24.275 -9.728 1.00 5.06 C ATOM 83 O ALA 11 40.565 25.381 -9.750 1.00 5.06 O ATOM 84 CB ALA 11 39.472 23.037 -11.153 1.00 5.06 C ATOM 85 N LEU 12 42.427 24.121 -9.529 1.00 5.52 N ATOM 86 CA LEU 12 43.340 25.231 -9.337 1.00 5.52 C ATOM 87 C LEU 12 44.662 24.960 -10.065 1.00 5.52 C ATOM 88 O LEU 12 45.189 23.829 -10.041 1.00 5.52 O ATOM 89 CB LEU 12 43.586 25.469 -7.846 1.00 5.52 C ATOM 90 CG LEU 12 44.222 24.313 -7.071 1.00 5.52 C ATOM 91 CD1 LEU 12 45.732 24.314 -7.246 1.00 5.52 C ATOM 92 CD2 LEU 12 43.861 24.393 -5.595 1.00 5.52 C ATOM 93 N SER 13 45.189 25.996 -10.707 1.00 6.13 N ATOM 94 CA SER 13 46.494 25.897 -11.322 1.00 6.13 C ATOM 95 C SER 13 46.673 24.683 -12.243 1.00 6.13 C ATOM 96 O SER 13 47.643 23.937 -12.117 1.00 6.13 O ATOM 97 CB SER 13 47.588 25.852 -10.253 1.00 6.13 C ATOM 98 OG SER 13 48.856 26.154 -10.808 1.00 6.13 O ATOM 99 N ASP 14 45.734 24.489 -13.169 1.00 6.11 N ATOM 100 CA ASP 14 45.798 23.381 -14.143 1.00 6.11 C ATOM 101 C ASP 14 45.712 21.993 -13.503 1.00 6.11 C ATOM 102 O ASP 14 45.961 20.973 -14.172 1.00 6.11 O ATOM 103 CB ASP 14 47.087 23.464 -14.963 1.00 6.11 C ATOM 104 CG ASP 14 47.150 24.707 -15.827 1.00 6.11 C ATOM 105 OD1 ASP 14 46.077 25.205 -16.231 1.00 6.11 O ATOM 106 OD2 ASP 14 48.271 25.184 -16.102 1.00 6.11 O ATOM 107 N GLY 15 45.365 21.922 -12.220 1.00 5.42 N ATOM 108 CA GLY 15 45.307 20.610 -11.539 1.00 5.42 C ATOM 109 C GLY 15 43.927 20.219 -11.022 1.00 5.42 C ATOM 110 O GLY 15 43.113 21.090 -10.748 1.00 5.42 O ATOM 111 N VAL 16 43.673 18.918 -10.895 1.00 5.00 N ATOM 112 CA VAL 16 42.401 18.450 -10.353 1.00 5.00 C ATOM 113 C VAL 16 42.667 17.610 -9.097 1.00 5.00 C ATOM 114 O VAL 16 43.273 16.560 -9.175 1.00 5.00 O ATOM 115 CB VAL 16 41.607 17.642 -11.395 1.00 5.00 C ATOM 116 CG1 VAL 16 40.299 17.144 -10.799 1.00 5.00 C ATOM 117 CG2 VAL 16 41.344 18.484 -12.635 1.00 5.00 C ATOM 118 N HIS 17 42.204 18.094 -7.945 1.00 3.97 N ATOM 119 CA HIS 17 42.390 17.443 -6.646 1.00 3.97 C ATOM 120 C HIS 17 41.089 16.855 -6.096 1.00 3.97 C ATOM 121 O HIS 17 40.019 17.468 -6.258 1.00 3.97 O ATOM 122 CB HIS 17 42.970 18.430 -5.630 1.00 3.97 C ATOM 123 CG HIS 17 44.358 18.888 -5.956 1.00 3.97 C ATOM 124 ND1 HIS 17 45.445 18.042 -5.933 1.00 3.97 N ATOM 125 CD2 HIS 17 44.970 20.150 -6.347 1.00 3.97 C ATOM 126 CE1 HIS 17 46.547 18.736 -6.269 1.00 3.97 C ATOM 127 NE2 HIS 17 46.269 20.001 -6.519 1.00 3.97 N ATOM 128 N LYS 18 41.180 15.686 -5.457 1.00 3.96 N ATOM 129 CA LYS 18 40.019 15.068 -4.842 1.00 3.96 C ATOM 130 C LYS 18 39.757 15.935 -3.612 1.00 3.96 C ATOM 131 O LYS 18 40.278 17.062 -3.523 1.00 3.96 O ATOM 132 CB LYS 18 40.301 13.600 -4.519 1.00 3.96 C ATOM 133 CG LYS 18 41.382 13.392 -3.471 1.00 3.96 C ATOM 134 CD LYS 18 41.630 11.914 -3.218 1.00 3.96 C ATOM 135 CE LYS 18 42.670 11.707 -2.130 1.00 3.96 C ATOM 136 NZ LYS 18 42.941 10.262 -1.889 1.00 3.96 N ATOM 137 N ILE 19 38.974 15.501 -2.625 1.00 3.65 N ATOM 138 CA ILE 19 39.024 16.159 -1.352 1.00 3.65 C ATOM 139 C ILE 19 38.014 15.431 -0.527 1.00 3.65 C ATOM 140 O ILE 19 36.842 15.352 -0.893 1.00 3.65 O ATOM 141 CB ILE 19 38.742 17.667 -1.485 1.00 3.65 C ATOM 142 CG1 ILE 19 39.800 18.331 -2.370 1.00 3.65 C ATOM 143 CG2 ILE 19 38.662 18.318 -0.112 1.00 3.65 C ATOM 144 CD1 ILE 19 39.474 19.761 -2.741 1.00 3.65 C ATOM 145 N GLU 20 38.440 14.874 0.621 1.00 3.85 N ATOM 146 CA GLU 20 37.562 14.001 1.349 1.00 3.85 C ATOM 147 C GLU 20 37.459 14.516 2.752 1.00 3.85 C ATOM 148 O GLU 20 38.460 14.886 3.361 1.00 3.85 O ATOM 149 CB GLU 20 38.083 12.563 1.309 1.00 3.85 C ATOM 150 CG GLU 20 38.130 11.958 -0.085 1.00 3.85 C ATOM 151 CD GLU 20 38.646 10.533 -0.085 1.00 3.85 C ATOM 152 OE1 GLU 20 37.879 9.624 0.299 1.00 3.85 O ATOM 153 OE2 GLU 20 39.817 10.325 -0.467 1.00 3.85 O ATOM 154 N PHE 21 36.230 14.552 3.304 1.00 3.77 N ATOM 155 CA PHE 21 36.024 15.041 4.637 1.00 3.77 C ATOM 156 C PHE 21 35.698 13.843 5.499 1.00 3.77 C ATOM 157 O PHE 21 34.793 13.087 5.158 1.00 3.77 O ATOM 158 CB PHE 21 34.910 16.090 4.657 1.00 3.77 C ATOM 159 CG PHE 21 35.251 17.349 3.910 1.00 3.77 C ATOM 160 CD1 PHE 21 35.493 17.319 2.548 1.00 3.77 C ATOM 161 CD2 PHE 21 35.328 18.562 4.570 1.00 3.77 C ATOM 162 CE1 PHE 21 35.806 18.478 1.862 1.00 3.77 C ATOM 163 CE2 PHE 21 35.641 19.720 3.884 1.00 3.77 C ATOM 164 CZ PHE 21 35.880 19.681 2.535 1.00 3.77 C ATOM 165 N GLU 22 36.413 13.621 6.641 1.00 4.25 N ATOM 166 CA GLU 22 36.488 12.239 7.052 1.00 4.25 C ATOM 167 C GLU 22 35.428 11.703 7.948 1.00 4.25 C ATOM 168 O GLU 22 35.179 10.498 7.955 1.00 4.25 O ATOM 169 CB GLU 22 37.815 11.962 7.761 1.00 4.25 C ATOM 170 CG GLU 22 39.040 12.136 6.877 1.00 4.25 C ATOM 171 CD GLU 22 39.082 11.136 5.739 1.00 4.25 C ATOM 172 OE1 GLU 22 38.844 9.937 5.992 1.00 4.25 O ATOM 173 OE2 GLU 22 39.354 11.552 4.593 1.00 4.25 O ATOM 174 N HIS 23 34.764 12.553 8.730 1.00 4.78 N ATOM 175 CA HIS 23 34.004 12.069 9.839 1.00 4.78 C ATOM 176 C HIS 23 34.841 11.285 10.787 1.00 4.78 C ATOM 177 O HIS 23 35.798 10.605 10.424 1.00 4.78 O ATOM 178 CB HIS 23 32.835 11.209 9.352 1.00 4.78 C ATOM 179 CG HIS 23 31.838 11.957 8.524 1.00 4.78 C ATOM 180 ND1 HIS 23 30.972 12.886 9.061 1.00 4.78 N ATOM 181 CD2 HIS 23 31.471 11.988 7.117 1.00 4.78 C ATOM 182 CE1 HIS 23 30.203 13.386 8.078 1.00 4.78 C ATOM 183 NE2 HIS 23 30.497 12.852 6.909 1.00 4.78 N ATOM 184 N GLY 24 34.476 11.372 12.075 1.00 5.47 N ATOM 185 CA GLY 24 35.221 10.701 13.095 1.00 5.47 C ATOM 186 C GLY 24 35.989 11.725 13.862 1.00 5.47 C ATOM 187 O GLY 24 35.507 12.207 14.884 1.00 5.47 O ATOM 188 N THR 25 37.206 12.084 13.389 1.00 5.90 N ATOM 189 CA THR 25 37.751 13.340 13.820 1.00 5.90 C ATOM 190 C THR 25 36.646 14.283 13.522 1.00 5.90 C ATOM 191 O THR 25 36.346 14.574 12.367 1.00 5.90 O ATOM 192 CB THR 25 39.068 13.664 13.090 1.00 5.90 C ATOM 193 OG1 THR 25 38.828 13.742 11.679 1.00 5.90 O ATOM 194 CG2 THR 25 40.101 12.578 13.349 1.00 5.90 C ATOM 195 N THR 26 36.032 14.763 14.614 1.00 5.97 N ATOM 196 CA THR 26 34.958 15.699 14.631 1.00 5.97 C ATOM 197 C THR 26 35.076 16.305 15.993 1.00 5.97 C ATOM 198 O THR 26 34.435 17.303 16.319 1.00 5.97 O ATOM 199 CB THR 26 33.605 15.010 14.369 1.00 5.97 C ATOM 200 OG1 THR 26 33.360 14.029 15.386 1.00 5.97 O ATOM 201 CG2 THR 26 33.615 14.315 13.016 1.00 5.97 C ATOM 202 N SER 27 35.933 15.673 16.828 1.00 6.19 N ATOM 203 CA SER 27 36.470 16.335 17.981 1.00 6.19 C ATOM 204 C SER 27 37.290 17.451 17.436 1.00 6.19 C ATOM 205 O SER 27 36.760 18.473 17.003 1.00 6.19 O ATOM 206 CB SER 27 37.273 15.354 18.837 1.00 6.19 C ATOM 207 OG SER 27 38.430 14.908 18.151 1.00 6.19 O ATOM 208 N GLY 28 38.618 17.278 17.444 1.00 6.35 N ATOM 209 CA GLY 28 39.407 18.210 16.706 1.00 6.35 C ATOM 210 C GLY 28 39.866 17.500 15.463 1.00 6.35 C ATOM 211 O GLY 28 40.711 16.612 15.555 1.00 6.35 O ATOM 212 N LYS 29 39.315 17.882 14.280 1.00 5.38 N ATOM 213 CA LYS 29 40.104 18.097 13.086 1.00 5.38 C ATOM 214 C LYS 29 39.566 17.457 11.899 1.00 5.38 C ATOM 215 O LYS 29 40.299 17.367 10.910 1.00 5.38 O ATOM 216 CB LYS 29 41.537 17.604 13.295 1.00 5.38 C ATOM 217 CG LYS 29 42.457 17.850 12.110 1.00 5.38 C ATOM 218 CD LYS 29 43.878 17.403 12.412 1.00 5.38 C ATOM 219 CE LYS 29 44.816 17.729 11.261 1.00 5.38 C ATOM 220 NZ LYS 29 44.487 16.946 10.037 1.00 5.38 N ATOM 221 N ARG 30 38.296 17.024 12.010 1.00 5.06 N ATOM 222 CA ARG 30 37.498 16.418 10.987 1.00 5.06 C ATOM 223 C ARG 30 38.115 16.505 9.635 1.00 5.06 C ATOM 224 O ARG 30 37.769 17.341 8.803 1.00 5.06 O ATOM 225 CB ARG 30 36.109 17.057 10.942 1.00 5.06 C ATOM 226 CG ARG 30 35.164 16.418 9.937 1.00 5.06 C ATOM 227 CD ARG 30 33.779 17.038 10.010 1.00 5.06 C ATOM 228 NE ARG 30 32.862 16.445 9.040 1.00 5.06 N ATOM 229 CZ ARG 30 31.594 16.813 8.888 1.00 5.06 C ATOM 230 NH1 ARG 30 30.834 16.217 7.979 1.00 5.06 H ATOM 231 NH2 ARG 30 31.088 17.778 9.644 1.00 5.06 H ATOM 232 N VAL 31 39.077 15.588 9.421 1.00 4.70 N ATOM 233 CA VAL 31 40.276 15.815 8.670 1.00 4.70 C ATOM 234 C VAL 31 39.959 16.129 7.243 1.00 4.70 C ATOM 235 O VAL 31 39.044 15.552 6.662 1.00 4.70 O ATOM 236 CB VAL 31 41.225 14.604 8.742 1.00 4.70 C ATOM 237 CG1 VAL 31 42.412 14.803 7.813 1.00 4.70 C ATOM 238 CG2 VAL 31 41.694 14.380 10.172 1.00 4.70 C ATOM 239 N VAL 32 40.717 17.066 6.628 1.00 4.00 N ATOM 240 CA VAL 32 40.412 17.338 5.254 1.00 4.00 C ATOM 241 C VAL 32 41.534 16.954 4.348 1.00 4.00 C ATOM 242 O VAL 32 42.614 17.545 4.343 1.00 4.00 O ATOM 243 CB VAL 32 40.066 18.823 5.036 1.00 4.00 C ATOM 244 CG1 VAL 32 39.756 19.088 3.570 1.00 4.00 C ATOM 245 CG2 VAL 32 38.893 19.231 5.915 1.00 4.00 C ATOM 246 N TYR 33 41.237 15.900 3.546 1.00 3.88 N ATOM 247 CA TYR 33 42.178 14.944 3.027 1.00 3.88 C ATOM 248 C TYR 33 42.365 15.226 1.579 1.00 3.88 C ATOM 249 O TYR 33 41.512 14.891 0.756 1.00 3.88 O ATOM 250 CB TYR 33 41.681 13.516 3.268 1.00 3.88 C ATOM 251 CG TYR 33 42.657 12.447 2.832 1.00 3.88 C ATOM 252 CD1 TYR 33 44.004 12.537 3.157 1.00 3.88 C ATOM 253 CD2 TYR 33 42.227 11.349 2.098 1.00 3.88 C ATOM 254 CE1 TYR 33 44.902 11.564 2.764 1.00 3.88 C ATOM 255 CE2 TYR 33 43.111 10.366 1.696 1.00 3.88 C ATOM 256 CZ TYR 33 44.458 10.483 2.035 1.00 3.88 C ATOM 257 OH TYR 33 45.351 9.512 1.642 1.00 3.88 H ATOM 258 N VAL 34 43.501 15.857 1.232 1.00 3.93 N ATOM 259 CA VAL 34 43.725 16.237 -0.130 1.00 3.93 C ATOM 260 C VAL 34 45.096 15.780 -0.627 1.00 3.93 C ATOM 261 O VAL 34 46.138 16.142 -0.075 1.00 3.93 O ATOM 262 CB VAL 34 43.592 17.759 -0.321 1.00 3.93 C ATOM 263 CG1 VAL 34 43.851 18.139 -1.771 1.00 3.93 C ATOM 264 CG2 VAL 34 42.216 18.233 0.120 1.00 3.93 C ATOM 265 N ASP 35 45.039 15.001 -1.652 1.00 3.89 N ATOM 266 CA ASP 35 46.169 14.481 -2.419 1.00 3.89 C ATOM 267 C ASP 35 47.176 13.593 -1.582 1.00 3.89 C ATOM 268 O ASP 35 48.340 13.532 -1.956 1.00 3.89 O ATOM 269 CB ASP 35 46.957 15.627 -3.055 1.00 3.89 C ATOM 270 CG ASP 35 46.149 16.387 -4.087 1.00 3.89 C ATOM 271 OD1 ASP 35 45.623 15.744 -5.020 1.00 3.89 O ATOM 272 OD2 ASP 35 46.043 17.626 -3.965 1.00 3.89 O ATOM 273 N GLY 36 46.758 12.921 -0.487 1.00 4.09 N ATOM 274 CA GLY 36 47.563 11.979 0.324 1.00 4.09 C ATOM 275 C GLY 36 48.589 12.723 1.153 1.00 4.09 C ATOM 276 O GLY 36 48.820 13.884 0.806 1.00 4.09 O ATOM 277 N LYS 37 49.118 12.035 2.156 1.00 4.84 N ATOM 278 CA LYS 37 50.085 12.659 3.078 1.00 4.84 C ATOM 279 C LYS 37 49.899 14.211 3.085 1.00 4.84 C ATOM 280 O LYS 37 50.896 14.937 3.248 1.00 4.84 O ATOM 281 CB LYS 37 51.516 12.291 2.683 1.00 4.84 C ATOM 282 CG LYS 37 52.579 12.833 3.624 1.00 4.84 C ATOM 283 CD LYS 37 53.968 12.365 3.219 1.00 4.84 C ATOM 284 CE LYS 37 55.032 12.922 4.151 1.00 4.84 C ATOM 285 NZ LYS 37 56.397 12.474 3.764 1.00 4.84 N ATOM 286 N GLU 38 48.679 14.675 2.916 1.00 4.96 N ATOM 287 CA GLU 38 48.385 16.083 2.999 1.00 4.96 C ATOM 288 C GLU 38 47.082 16.296 3.876 1.00 4.96 C ATOM 289 O GLU 38 45.975 15.865 3.512 1.00 4.96 O ATOM 290 CB GLU 38 48.208 16.677 1.600 1.00 4.96 C ATOM 291 CG GLU 38 47.943 18.173 1.590 1.00 4.96 C ATOM 292 CD GLU 38 47.832 18.736 0.187 1.00 4.96 C ATOM 293 OE1 GLU 38 47.967 17.956 -0.778 1.00 4.96 O ATOM 294 OE2 GLU 38 47.608 19.958 0.052 1.00 4.96 O ATOM 295 N GLU 39 47.301 16.938 4.952 1.00 4.48 N ATOM 296 CA GLU 39 46.433 17.414 5.949 1.00 4.48 C ATOM 297 C GLU 39 46.381 18.945 5.745 1.00 4.48 C ATOM 298 O GLU 39 47.309 19.648 6.181 1.00 4.48 O ATOM 299 CB GLU 39 46.937 17.010 7.337 1.00 4.48 C ATOM 300 CG GLU 39 46.939 15.509 7.581 1.00 4.48 C ATOM 301 CD GLU 39 47.451 15.146 8.962 1.00 4.48 C ATOM 302 OE1 GLU 39 47.965 16.045 9.660 1.00 4.48 O ATOM 303 OE2 GLU 39 47.337 13.963 9.345 1.00 4.48 O ATOM 304 N ILE 40 45.320 19.473 5.094 1.00 4.83 N ATOM 305 CA ILE 40 45.312 20.872 4.780 1.00 4.83 C ATOM 306 C ILE 40 45.361 21.758 6.024 1.00 4.83 C ATOM 307 O ILE 40 44.905 21.373 7.101 1.00 4.83 O ATOM 308 CB ILE 40 44.078 21.257 3.943 1.00 4.83 C ATOM 309 CG1 ILE 40 44.268 22.640 3.319 1.00 4.83 C ATOM 310 CG2 ILE 40 42.816 21.183 4.789 1.00 4.83 C ATOM 311 CD1 ILE 40 45.281 22.671 2.196 1.00 4.83 C ATOM 312 N ARG 41 45.931 22.953 5.826 1.00 5.50 N ATOM 313 CA ARG 41 46.037 24.027 6.778 1.00 5.50 C ATOM 314 C ARG 41 44.916 25.074 6.519 1.00 5.50 C ATOM 315 O ARG 41 44.941 25.823 5.525 1.00 5.50 O ATOM 316 CB ARG 41 47.418 24.680 6.698 1.00 5.50 C ATOM 317 CG ARG 41 48.567 23.748 7.046 1.00 5.50 C ATOM 318 CD ARG 41 49.906 24.464 6.955 1.00 5.50 C ATOM 319 NE ARG 41 51.022 23.575 7.265 1.00 5.50 N ATOM 320 CZ ARG 41 52.296 23.956 7.288 1.00 5.50 C ATOM 321 NH1 ARG 41 53.245 23.078 7.580 1.00 5.50 H ATOM 322 NH2 ARG 41 52.616 25.214 7.019 1.00 5.50 H ATOM 323 N LYS 42 43.996 25.045 7.453 1.00 5.68 N ATOM 324 CA LYS 42 42.813 25.881 7.488 1.00 5.68 C ATOM 325 C LYS 42 42.938 26.707 8.788 1.00 5.68 C ATOM 326 O LYS 42 43.431 26.271 9.844 1.00 5.68 O ATOM 327 CB LYS 42 41.548 25.022 7.439 1.00 5.68 C ATOM 328 CG LYS 42 41.374 24.247 6.144 1.00 5.68 C ATOM 329 CD LYS 42 40.068 23.469 6.138 1.00 5.68 C ATOM 330 CE LYS 42 39.914 22.660 4.860 1.00 5.68 C ATOM 331 NZ LYS 42 38.641 21.887 4.843 1.00 5.68 N ATOM 332 N GLU 43 42.478 27.933 8.709 1.00 6.23 N ATOM 333 CA GLU 43 42.485 28.941 9.782 1.00 6.23 C ATOM 334 C GLU 43 41.653 28.579 11.024 1.00 6.23 C ATOM 335 O GLU 43 42.109 28.958 12.113 1.00 6.23 O ATOM 336 CB GLU 43 41.982 30.287 9.257 1.00 6.23 C ATOM 337 CG GLU 43 41.996 31.401 10.290 1.00 6.23 C ATOM 338 CD GLU 43 43.399 31.770 10.729 1.00 6.23 C ATOM 339 OE1 GLU 43 44.357 31.445 9.996 1.00 6.23 O ATOM 340 OE2 GLU 43 43.542 32.385 11.807 1.00 6.23 O ATOM 341 N TRP 44 40.494 27.888 10.905 1.00 5.41 N ATOM 342 CA TRP 44 39.686 27.526 12.031 1.00 5.41 C ATOM 343 C TRP 44 39.216 28.839 12.783 1.00 5.41 C ATOM 344 O TRP 44 39.336 28.885 14.002 1.00 5.41 O ATOM 345 CB TRP 44 40.461 26.603 12.972 1.00 5.41 C ATOM 346 CG TRP 44 40.982 25.366 12.305 1.00 5.41 C ATOM 347 CD1 TRP 44 40.499 24.782 11.170 1.00 5.41 C ATOM 348 CD2 TRP 44 42.089 24.562 12.731 1.00 5.41 C ATOM 349 NE1 TRP 44 41.235 23.664 10.862 1.00 5.41 N ATOM 350 CE2 TRP 44 42.217 23.509 11.808 1.00 5.41 C ATOM 351 CE3 TRP 44 42.983 24.631 13.804 1.00 5.41 C ATOM 352 CZ2 TRP 44 43.204 22.531 11.924 1.00 5.41 C ATOM 353 CZ3 TRP 44 43.959 23.660 13.915 1.00 5.41 C ATOM 354 CH2 TRP 44 44.065 22.623 12.981 1.00 5.41 H ATOM 355 N MET 45 38.701 29.866 12.073 1.00 6.39 N ATOM 356 CA MET 45 38.248 31.127 12.628 1.00 6.39 C ATOM 357 C MET 45 36.736 31.034 12.911 1.00 6.39 C ATOM 358 O MET 45 35.916 31.113 11.981 1.00 6.39 O ATOM 359 CB MET 45 38.562 32.277 11.670 1.00 6.39 C ATOM 360 CG MET 45 38.161 33.648 12.193 1.00 6.39 C ATOM 361 SD MET 45 39.064 34.116 13.681 1.00 6.39 S ATOM 362 CE MET 45 40.690 34.439 13.003 1.00 6.39 C ATOM 363 N PHE 46 36.403 30.871 14.182 1.00 6.22 N ATOM 364 CA PHE 46 35.020 30.799 14.699 1.00 6.22 C ATOM 365 C PHE 46 34.356 32.188 14.709 1.00 6.22 C ATOM 366 O PHE 46 34.817 33.094 15.414 1.00 6.22 O ATOM 367 CB PHE 46 35.005 30.201 16.107 1.00 6.22 C ATOM 368 CG PHE 46 33.628 30.047 16.686 1.00 6.22 C ATOM 369 CD1 PHE 46 32.807 29.006 16.290 1.00 6.22 C ATOM 370 CD2 PHE 46 33.152 30.945 17.626 1.00 6.22 C ATOM 371 CE1 PHE 46 31.540 28.863 16.823 1.00 6.22 C ATOM 372 CE2 PHE 46 31.885 30.804 18.158 1.00 6.22 C ATOM 373 CZ PHE 46 31.080 29.768 17.761 1.00 6.22 C ATOM 374 N LYS 47 33.283 32.294 13.910 1.00 6.67 N ATOM 375 CA LYS 47 32.470 33.504 13.812 1.00 6.67 C ATOM 376 C LYS 47 31.176 33.354 14.684 1.00 6.67 C ATOM 377 O LYS 47 30.869 32.241 15.146 1.00 6.67 O ATOM 378 CB LYS 47 32.109 33.790 12.353 1.00 6.67 C ATOM 379 CG LYS 47 33.303 34.107 11.468 1.00 6.67 C ATOM 380 CD LYS 47 32.870 34.409 10.043 1.00 6.67 C ATOM 381 CE LYS 47 34.061 34.749 9.163 1.00 6.67 C ATOM 382 NZ LYS 47 33.656 35.010 7.755 1.00 6.67 N ATOM 383 N LEU 48 30.418 34.451 14.914 1.00 7.72 N ATOM 384 CA LEU 48 29.140 34.315 15.659 1.00 7.72 C ATOM 385 C LEU 48 28.393 33.006 15.211 1.00 7.72 C ATOM 386 O LEU 48 28.067 32.195 16.089 1.00 7.72 O ATOM 387 CB LEU 48 28.257 35.544 15.438 1.00 7.72 C ATOM 388 CG LEU 48 26.896 35.535 16.137 1.00 7.72 C ATOM 389 CD1 LEU 48 27.068 35.471 17.646 1.00 7.72 C ATOM 390 CD2 LEU 48 26.085 36.763 15.750 1.00 7.72 C ATOM 391 N VAL 49 28.113 32.766 13.905 1.00 6.54 N ATOM 392 CA VAL 49 27.485 31.562 13.356 1.00 6.54 C ATOM 393 C VAL 49 28.343 31.027 12.181 1.00 6.54 C ATOM 394 O VAL 49 28.715 31.798 11.290 1.00 6.54 O ATOM 395 CB VAL 49 26.041 31.838 12.897 1.00 6.54 C ATOM 396 CG1 VAL 49 25.424 30.583 12.299 1.00 6.54 C ATOM 397 CG2 VAL 49 25.201 32.346 14.058 1.00 6.54 C ATOM 398 N GLY 50 28.629 29.729 12.216 1.00 5.33 N ATOM 399 CA GLY 50 29.409 29.078 11.168 1.00 5.33 C ATOM 400 C GLY 50 30.936 29.229 11.401 1.00 5.33 C ATOM 401 O GLY 50 31.385 29.919 12.339 1.00 5.33 O ATOM 402 N LYS 51 31.693 28.577 10.542 1.00 4.98 N ATOM 403 CA LYS 51 33.145 28.599 10.607 1.00 4.98 C ATOM 404 C LYS 51 33.775 28.811 9.210 1.00 4.98 C ATOM 405 O LYS 51 33.432 28.115 8.255 1.00 4.98 O ATOM 406 CB LYS 51 33.674 27.301 11.223 1.00 4.98 C ATOM 407 CG LYS 51 33.257 27.085 12.668 1.00 4.98 C ATOM 408 CD LYS 51 33.882 25.823 13.241 1.00 4.98 C ATOM 409 CE LYS 51 33.451 25.599 14.681 1.00 4.98 C ATOM 410 NZ LYS 51 34.071 24.374 15.261 1.00 4.98 N ATOM 411 N GLU 52 34.685 29.768 9.110 1.00 4.89 N ATOM 412 CA GLU 52 35.380 30.055 7.866 1.00 4.89 C ATOM 413 C GLU 52 36.762 29.351 7.876 1.00 4.89 C ATOM 414 O GLU 52 37.679 29.842 8.564 1.00 4.89 O ATOM 415 CB GLU 52 35.534 31.565 7.676 1.00 4.89 C ATOM 416 CG GLU 52 36.195 31.961 6.365 1.00 4.89 C ATOM 417 CD GLU 52 36.316 33.464 6.204 1.00 4.89 C ATOM 418 OE1 GLU 52 35.273 34.128 6.027 1.00 4.89 O ATOM 419 OE2 GLU 52 37.453 33.978 6.254 1.00 4.89 O ATOM 420 N THR 53 36.884 28.251 7.137 1.00 4.53 N ATOM 421 CA THR 53 38.145 27.529 7.128 1.00 4.53 C ATOM 422 C THR 53 38.964 27.992 5.869 1.00 4.53 C ATOM 423 O THR 53 38.703 27.544 4.750 1.00 4.53 O ATOM 424 CB THR 53 37.923 26.006 7.112 1.00 4.53 C ATOM 425 OG1 THR 53 37.100 25.651 5.995 1.00 4.53 O ATOM 426 CG2 THR 53 37.231 25.555 8.389 1.00 4.53 C ATOM 427 N PHE 54 39.936 28.885 6.111 1.00 4.90 N ATOM 428 CA PHE 54 40.822 29.422 5.106 1.00 4.90 C ATOM 429 C PHE 54 41.969 28.474 4.873 1.00 4.90 C ATOM 430 O PHE 54 42.803 28.325 5.808 1.00 4.90 O ATOM 431 CB PHE 54 41.335 30.801 5.526 1.00 4.90 C ATOM 432 CG PHE 54 42.214 31.459 4.501 1.00 4.90 C ATOM 433 CD1 PHE 54 41.667 32.041 3.370 1.00 4.90 C ATOM 434 CD2 PHE 54 43.588 31.494 4.666 1.00 4.90 C ATOM 435 CE1 PHE 54 42.476 32.646 2.427 1.00 4.90 C ATOM 436 CE2 PHE 54 44.396 32.100 3.723 1.00 4.90 C ATOM 437 CZ PHE 54 43.846 32.674 2.607 1.00 4.90 C ATOM 438 N TYR 55 42.075 27.813 3.684 1.00 4.44 N ATOM 439 CA TYR 55 43.221 26.927 3.622 1.00 4.44 C ATOM 440 C TYR 55 44.035 27.577 2.372 1.00 4.44 C ATOM 441 O TYR 55 43.451 28.459 1.687 1.00 4.44 O ATOM 442 CB TYR 55 42.767 25.478 3.430 1.00 4.44 C ATOM 443 CG TYR 55 42.072 25.224 2.111 1.00 4.44 C ATOM 444 CD1 TYR 55 42.792 25.187 0.924 1.00 4.44 C ATOM 445 CD2 TYR 55 40.699 25.021 2.059 1.00 4.44 C ATOM 446 CE1 TYR 55 42.165 24.955 -0.286 1.00 4.44 C ATOM 447 CE2 TYR 55 40.055 24.788 0.858 1.00 4.44 C ATOM 448 CZ TYR 55 40.802 24.755 -0.319 1.00 4.44 C ATOM 449 OH TYR 55 40.176 24.525 -1.523 1.00 4.44 H ATOM 450 N VAL 56 45.249 27.172 2.120 1.00 4.72 N ATOM 451 CA VAL 56 45.945 27.784 1.018 1.00 4.72 C ATOM 452 C VAL 56 46.294 26.766 -0.085 1.00 4.72 C ATOM 453 O VAL 56 47.139 25.874 0.159 1.00 4.72 O ATOM 454 CB VAL 56 47.233 28.487 1.485 1.00 4.72 C ATOM 455 CG1 VAL 56 47.955 29.117 0.302 1.00 4.72 C ATOM 456 CG2 VAL 56 46.915 29.536 2.540 1.00 4.72 C ATOM 457 N GLY 57 45.682 26.877 -1.252 1.00 4.73 N ATOM 458 CA GLY 57 46.066 26.012 -2.312 1.00 4.73 C ATOM 459 C GLY 57 47.432 26.520 -2.767 1.00 4.73 C ATOM 460 O GLY 57 47.583 27.753 -2.905 1.00 4.73 O ATOM 461 N ALA 58 48.318 25.626 -2.970 1.00 4.60 N ATOM 462 CA ALA 58 49.709 25.924 -3.307 1.00 4.60 C ATOM 463 C ALA 58 49.917 26.540 -4.700 1.00 4.60 C ATOM 464 O ALA 58 50.821 27.383 -4.779 1.00 4.60 O ATOM 465 CB ALA 58 50.559 24.666 -3.215 1.00 4.60 C ATOM 466 N ALA 59 49.146 26.168 -5.760 1.00 5.33 N ATOM 467 CA ALA 59 49.442 26.803 -7.060 1.00 5.33 C ATOM 468 C ALA 59 48.769 28.179 -7.088 1.00 5.33 C ATOM 469 O ALA 59 47.791 28.366 -7.828 1.00 5.33 O ATOM 470 CB ALA 59 48.963 25.921 -8.203 1.00 5.33 C ATOM 471 N LYS 60 49.331 29.073 -6.276 1.00 5.32 N ATOM 472 CA LYS 60 48.961 30.423 -6.135 1.00 5.32 C ATOM 473 C LYS 60 47.396 30.641 -5.964 1.00 5.32 C ATOM 474 O LYS 60 46.910 31.589 -6.588 1.00 5.32 O ATOM 475 CB LYS 60 49.441 31.239 -7.337 1.00 5.32 C ATOM 476 CG LYS 60 50.949 31.248 -7.518 1.00 5.32 C ATOM 477 CD LYS 60 51.361 32.135 -8.682 1.00 5.32 C ATOM 478 CE LYS 60 52.870 32.146 -8.862 1.00 5.32 C ATOM 479 NZ LYS 60 53.286 32.979 -10.023 1.00 5.32 N ATOM 480 N THR 61 46.641 29.821 -5.171 1.00 4.76 N ATOM 481 CA THR 61 45.158 29.992 -5.037 1.00 4.76 C ATOM 482 C THR 61 44.699 29.900 -3.552 1.00 4.76 C ATOM 483 O THR 61 45.226 29.114 -2.761 1.00 4.76 O ATOM 484 CB THR 61 44.392 28.943 -5.864 1.00 4.76 C ATOM 485 OG1 THR 61 44.745 29.070 -7.247 1.00 4.76 O ATOM 486 CG2 THR 61 42.891 29.147 -5.725 1.00 4.76 C ATOM 487 N LYS 62 43.707 30.753 -3.279 1.00 4.64 N ATOM 488 CA LYS 62 43.026 30.821 -1.996 1.00 4.64 C ATOM 489 C LYS 62 41.604 30.215 -2.167 1.00 4.64 C ATOM 490 O LYS 62 40.685 30.883 -2.677 1.00 4.64 O ATOM 491 CB LYS 62 42.968 32.265 -1.496 1.00 4.64 C ATOM 492 CG LYS 62 44.327 32.874 -1.195 1.00 4.64 C ATOM 493 CD LYS 62 44.195 34.307 -0.704 1.00 4.64 C ATOM 494 CE LYS 62 45.555 34.924 -0.428 1.00 4.64 C ATOM 495 NZ LYS 62 45.441 36.325 0.065 1.00 4.64 N ATOM 496 N ALA 63 41.446 28.956 -1.737 1.00 4.29 N ATOM 497 CA ALA 63 40.213 28.176 -1.844 1.00 4.29 C ATOM 498 C ALA 63 39.570 27.953 -0.448 1.00 4.29 C ATOM 499 O ALA 63 40.258 27.520 0.485 1.00 4.29 O ATOM 500 CB ALA 63 40.489 26.839 -2.514 1.00 4.29 C ATOM 501 N THR 64 38.259 28.249 -0.314 1.00 4.10 N ATOM 502 CA THR 64 37.571 27.995 0.951 1.00 4.10 C ATOM 503 C THR 64 36.152 27.365 0.807 1.00 4.10 C ATOM 504 O THR 64 35.319 27.825 0.047 1.00 4.10 O ATOM 505 CB THR 64 37.418 29.284 1.780 1.00 4.10 C ATOM 506 OG1 THR 64 38.712 29.841 2.044 1.00 4.10 O ATOM 507 CG2 THR 64 36.735 28.987 3.106 1.00 4.10 C ATOM 508 N ILE 65 35.940 26.274 1.599 1.00 4.11 N ATOM 509 CA ILE 65 34.661 25.530 1.734 1.00 4.11 C ATOM 510 C ILE 65 33.748 26.376 2.652 1.00 4.11 C ATOM 511 O ILE 65 34.033 26.557 3.836 1.00 4.11 O ATOM 512 CB ILE 65 34.889 24.111 2.287 1.00 4.11 C ATOM 513 CG1 ILE 65 35.689 23.272 1.290 1.00 4.11 C ATOM 514 CG2 ILE 65 33.562 23.458 2.641 1.00 4.11 C ATOM 515 CD1 ILE 65 37.175 23.563 1.300 1.00 4.11 C ATOM 516 N ASN 66 32.672 26.868 2.067 1.00 4.31 N ATOM 517 CA ASN 66 31.663 27.647 2.765 1.00 4.31 C ATOM 518 C ASN 66 30.604 26.647 3.280 1.00 4.31 C ATOM 519 O ASN 66 29.805 26.121 2.503 1.00 4.31 O ATOM 520 CB ASN 66 31.075 28.714 1.840 1.00 4.31 C ATOM 521 CG ASN 66 30.061 29.599 2.539 1.00 4.31 C ATOM 522 OD1 ASN 66 29.341 29.148 3.430 1.00 4.31 O ATOM 523 ND2 ASN 66 30.004 30.863 2.138 1.00 4.31 N ATOM 524 N ILE 67 30.604 26.388 4.591 1.00 4.20 N ATOM 525 CA ILE 67 29.675 25.392 5.211 1.00 4.20 C ATOM 526 C ILE 67 28.491 26.230 5.891 1.00 4.20 C ATOM 527 O ILE 67 28.696 27.078 6.762 1.00 4.20 O ATOM 528 CB ILE 67 30.407 24.490 6.222 1.00 4.20 C ATOM 529 CG1 ILE 67 31.524 23.708 5.528 1.00 4.20 C ATOM 530 CG2 ILE 67 29.422 23.570 6.926 1.00 4.20 C ATOM 531 CD1 ILE 67 32.445 22.982 6.483 1.00 4.20 C ATOM 532 N ASP 68 27.299 25.893 5.401 1.00 4.44 N ATOM 533 CA ASP 68 26.012 26.405 5.819 1.00 4.44 C ATOM 534 C ASP 68 25.208 25.324 6.584 1.00 4.44 C ATOM 535 O ASP 68 25.171 24.184 6.098 1.00 4.44 O ATOM 536 CB ASP 68 25.214 26.901 4.612 1.00 4.44 C ATOM 537 CG ASP 68 25.826 28.133 3.974 1.00 4.44 C ATOM 538 OD1 ASP 68 26.613 28.825 4.655 1.00 4.44 O ATOM 539 OD2 ASP 68 25.518 28.407 2.796 1.00 4.44 O ATOM 540 N ALA 69 24.625 25.730 7.712 1.00 4.63 N ATOM 541 CA ALA 69 23.934 24.779 8.567 1.00 4.63 C ATOM 542 C ALA 69 22.516 25.211 9.015 1.00 4.63 C ATOM 543 O ALA 69 22.195 26.389 9.191 1.00 4.63 O ATOM 544 CB ALA 69 24.755 24.493 9.816 1.00 4.63 C ATOM 545 N ILE 70 21.709 24.157 9.181 1.00 5.38 N ATOM 546 CA ILE 70 20.346 24.215 9.691 1.00 5.38 C ATOM 547 C ILE 70 20.401 23.601 11.111 1.00 5.38 C ATOM 548 O ILE 70 20.485 22.369 11.192 1.00 5.38 O ATOM 549 CB ILE 70 19.364 23.478 8.762 1.00 5.38 C ATOM 550 CG1 ILE 70 19.395 24.090 7.360 1.00 5.38 C ATOM 551 CG2 ILE 70 17.963 23.486 9.353 1.00 5.38 C ATOM 552 CD1 ILE 70 18.616 23.300 6.331 1.00 5.38 C ATOM 553 N SER 71 20.356 24.446 12.158 1.00 5.19 N ATOM 554 CA SER 71 20.512 23.970 13.545 1.00 5.19 C ATOM 555 C SER 71 21.841 23.171 13.489 1.00 5.19 C ATOM 556 O SER 71 22.816 23.773 13.007 1.00 5.19 O ATOM 557 CB SER 71 19.296 23.143 13.968 1.00 5.19 C ATOM 558 OG SER 71 19.323 22.872 15.359 1.00 5.19 O ATOM 559 N GLY 72 21.830 21.963 13.939 1.00 4.60 N ATOM 560 CA GLY 72 22.939 21.044 13.765 1.00 4.60 C ATOM 561 C GLY 72 22.362 19.845 12.897 1.00 4.60 C ATOM 562 O GLY 72 23.092 18.855 12.763 1.00 4.60 O ATOM 563 N PHE 73 21.121 19.907 12.326 1.00 4.17 N ATOM 564 CA PHE 73 20.479 18.845 11.567 1.00 4.17 C ATOM 565 C PHE 73 21.062 18.659 10.145 1.00 4.17 C ATOM 566 O PHE 73 21.485 17.523 9.871 1.00 4.17 O ATOM 567 CB PHE 73 18.976 19.104 11.450 1.00 4.17 C ATOM 568 CG PHE 73 18.240 18.060 10.659 1.00 4.17 C ATOM 569 CD1 PHE 73 17.912 16.842 11.229 1.00 4.17 C ATOM 570 CD2 PHE 73 17.875 18.297 9.345 1.00 4.17 C ATOM 571 CE1 PHE 73 17.236 15.882 10.501 1.00 4.17 C ATOM 572 CE2 PHE 73 17.199 17.336 8.618 1.00 4.17 C ATOM 573 CZ PHE 73 16.879 16.133 9.190 1.00 4.17 C ATOM 574 N ALA 74 21.100 19.680 9.269 1.00 3.80 N ATOM 575 CA ALA 74 21.617 19.545 7.922 1.00 3.80 C ATOM 576 C ALA 74 22.760 20.557 7.618 1.00 3.80 C ATOM 577 O ALA 74 22.522 21.757 7.448 1.00 3.80 O ATOM 578 CB ALA 74 20.500 19.724 6.905 1.00 3.80 C ATOM 579 N TYR 75 23.974 20.014 7.565 1.00 3.37 N ATOM 580 CA TYR 75 25.192 20.716 7.208 1.00 3.37 C ATOM 581 C TYR 75 25.348 20.591 5.661 1.00 3.37 C ATOM 582 O TYR 75 25.269 19.465 5.142 1.00 3.37 O ATOM 583 CB TYR 75 26.388 20.131 7.962 1.00 3.37 C ATOM 584 CG TYR 75 26.354 20.384 9.453 1.00 3.37 C ATOM 585 CD1 TYR 75 26.116 19.347 10.345 1.00 3.37 C ATOM 586 CD2 TYR 75 26.561 21.660 9.963 1.00 3.37 C ATOM 587 CE1 TYR 75 26.084 19.569 11.709 1.00 3.37 C ATOM 588 CE2 TYR 75 26.532 21.900 11.323 1.00 3.37 C ATOM 589 CZ TYR 75 26.290 20.840 12.197 1.00 3.37 C ATOM 590 OH TYR 75 26.259 21.063 13.554 1.00 3.37 H ATOM 591 N GLU 76 25.559 21.684 4.946 1.00 3.35 N ATOM 592 CA GLU 76 25.815 21.717 3.508 1.00 3.35 C ATOM 593 C GLU 76 27.086 22.576 3.334 1.00 3.35 C ATOM 594 O GLU 76 27.084 23.752 3.774 1.00 3.35 O ATOM 595 CB GLU 76 24.605 22.280 2.761 1.00 3.35 C ATOM 596 CG GLU 76 24.764 22.304 1.249 1.00 3.35 C ATOM 597 CD GLU 76 23.525 22.814 0.540 1.00 3.35 C ATOM 598 OE1 GLU 76 22.538 23.144 1.232 1.00 3.35 O ATOM 599 OE2 GLU 76 23.540 22.885 -0.706 1.00 3.35 O ATOM 600 N TYR 77 28.090 21.962 2.714 1.00 3.27 N ATOM 601 CA TYR 77 29.375 22.644 2.566 1.00 3.27 C ATOM 602 C TYR 77 29.653 22.845 1.045 1.00 3.27 C ATOM 603 O TYR 77 29.819 21.846 0.315 1.00 3.27 O ATOM 604 CB TYR 77 30.488 21.839 3.239 1.00 3.27 C ATOM 605 CG TYR 77 30.331 21.709 4.738 1.00 3.27 C ATOM 606 CD1 TYR 77 30.694 20.539 5.392 1.00 3.27 C ATOM 607 CD2 TYR 77 29.820 22.757 5.493 1.00 3.27 C ATOM 608 CE1 TYR 77 30.552 20.411 6.761 1.00 3.27 C ATOM 609 CE2 TYR 77 29.672 22.647 6.862 1.00 3.27 C ATOM 610 CZ TYR 77 30.044 21.461 7.494 1.00 3.27 C ATOM 611 OH TYR 77 29.903 21.336 8.857 1.00 3.27 H ATOM 612 N THR 78 29.710 24.069 0.534 1.00 3.33 N ATOM 613 CA THR 78 29.990 24.316 -0.888 1.00 3.33 C ATOM 614 C THR 78 31.466 24.781 -1.060 1.00 3.33 C ATOM 615 O THR 78 31.894 25.773 -0.435 1.00 3.33 O ATOM 616 CB THR 78 29.031 25.367 -1.478 1.00 3.33 C ATOM 617 OG1 THR 78 27.682 24.893 -1.385 1.00 3.33 O ATOM 618 CG2 THR 78 29.357 25.623 -2.942 1.00 3.33 C ATOM 619 N LEU 79 32.206 24.064 -1.895 1.00 3.11 N ATOM 620 CA LEU 79 33.622 24.330 -2.115 1.00 3.11 C ATOM 621 C LEU 79 33.799 24.757 -3.560 1.00 3.11 C ATOM 622 O LEU 79 33.324 24.092 -4.475 1.00 3.11 O ATOM 623 CB LEU 79 34.458 23.091 -1.785 1.00 3.11 C ATOM 624 CG LEU 79 35.963 23.203 -2.033 1.00 3.11 C ATOM 625 CD1 LEU 79 36.586 24.234 -1.104 1.00 3.11 C ATOM 626 CD2 LEU 79 36.639 21.852 -1.854 1.00 3.11 C ATOM 627 N GLU 80 34.482 25.873 -3.756 1.00 3.35 N ATOM 628 CA GLU 80 34.876 26.271 -5.078 1.00 3.35 C ATOM 629 C GLU 80 36.394 26.238 -5.073 1.00 3.35 C ATOM 630 O GLU 80 37.031 26.958 -4.307 1.00 3.35 O ATOM 631 CB GLU 80 34.306 27.651 -5.414 1.00 3.35 C ATOM 632 CG GLU 80 32.787 27.700 -5.465 1.00 3.35 C ATOM 633 CD GLU 80 32.221 26.968 -6.665 1.00 3.35 C ATOM 634 OE1 GLU 80 32.699 27.218 -7.793 1.00 3.35 O ATOM 635 OE2 GLU 80 31.299 26.147 -6.480 1.00 3.35 O ATOM 636 N ILE 81 36.956 25.399 -5.934 1.00 3.64 N ATOM 637 CA ILE 81 38.397 25.301 -6.105 1.00 3.64 C ATOM 638 C ILE 81 38.794 26.062 -7.364 1.00 3.64 C ATOM 639 O ILE 81 38.298 25.777 -8.452 1.00 3.64 O ATOM 640 CB ILE 81 38.859 23.834 -6.175 1.00 3.64 C ATOM 641 CG1 ILE 81 38.396 23.069 -4.934 1.00 3.64 C ATOM 642 CG2 ILE 81 40.367 23.759 -6.357 1.00 3.64 C ATOM 643 CD1 ILE 81 38.906 23.650 -3.633 1.00 3.64 C ATOM 644 N ASN 82 39.688 27.031 -7.215 1.00 4.35 N ATOM 645 CA ASN 82 40.074 27.930 -8.346 1.00 4.35 C ATOM 646 C ASN 82 38.857 28.371 -9.119 1.00 4.35 C ATOM 647 O ASN 82 38.885 28.394 -10.353 1.00 4.35 O ATOM 648 CB ASN 82 41.079 27.233 -9.266 1.00 4.35 C ATOM 649 CG ASN 82 41.808 28.203 -10.173 1.00 4.35 C ATOM 650 OD1 ASN 82 42.036 29.356 -9.810 1.00 4.35 O ATOM 651 ND2 ASN 82 42.177 27.737 -11.361 1.00 4.35 N ATOM 652 N GLY 83 37.774 28.727 -8.382 1.00 4.92 N ATOM 653 CA GLY 83 36.575 29.268 -9.002 1.00 4.92 C ATOM 654 C GLY 83 35.575 28.301 -9.547 1.00 4.92 C ATOM 655 O GLY 83 34.513 28.758 -9.950 1.00 4.92 O ATOM 656 N LYS 84 35.926 27.044 -9.546 1.00 4.86 N ATOM 657 CA LYS 84 35.069 26.001 -10.105 1.00 4.86 C ATOM 658 C LYS 84 34.467 25.098 -9.015 1.00 4.86 C ATOM 659 O LYS 84 35.123 24.757 -8.022 1.00 4.86 O ATOM 660 CB LYS 84 35.850 25.143 -11.102 1.00 4.86 C ATOM 661 CG LYS 84 36.310 25.895 -12.340 1.00 4.86 C ATOM 662 CD LYS 84 37.037 24.976 -13.308 1.00 4.86 C ATOM 663 CE LYS 84 37.533 25.736 -14.527 1.00 4.86 C ATOM 664 NZ LYS 84 38.287 24.856 -15.462 1.00 4.86 N ATOM 665 N SER 85 33.223 24.706 -9.187 1.00 4.77 N ATOM 666 CA SER 85 32.526 23.928 -8.189 1.00 4.77 C ATOM 667 C SER 85 33.194 22.586 -7.965 1.00 4.77 C ATOM 668 O SER 85 33.519 21.855 -8.917 1.00 4.77 O ATOM 669 CB SER 85 31.065 23.722 -8.595 1.00 4.77 C ATOM 670 OG SER 85 30.369 24.955 -8.641 1.00 4.77 O ATOM 671 N LEU 86 33.423 22.213 -6.700 1.00 4.49 N ATOM 672 CA LEU 86 33.869 20.932 -6.288 1.00 4.49 C ATOM 673 C LEU 86 32.678 19.937 -6.307 1.00 4.49 C ATOM 674 O LEU 86 31.622 20.262 -5.759 1.00 4.49 O ATOM 675 CB LEU 86 34.497 21.006 -4.895 1.00 4.49 C ATOM 676 CG LEU 86 35.958 21.455 -4.835 1.00 4.49 C ATOM 677 CD1 LEU 86 36.111 22.867 -5.381 1.00 4.49 C ATOM 678 CD2 LEU 86 36.485 21.381 -3.409 1.00 4.49 C ATOM 679 N LYS 87 32.869 18.764 -6.923 1.00 5.54 N ATOM 680 CA LYS 87 31.827 17.785 -7.011 1.00 5.54 C ATOM 681 C LYS 87 31.740 16.949 -5.735 1.00 5.54 C ATOM 682 O LYS 87 32.719 16.834 -4.973 1.00 5.54 O ATOM 683 CB LYS 87 32.050 16.872 -8.218 1.00 5.54 C ATOM 684 CG LYS 87 31.935 17.579 -9.559 1.00 5.54 C ATOM 685 CD LYS 87 32.136 16.609 -10.713 1.00 5.54 C ATOM 686 CE LYS 87 32.012 17.313 -12.054 1.00 5.54 C ATOM 687 NZ LYS 87 32.225 16.380 -13.194 1.00 5.54 N ATOM 688 N LYS 88 30.587 16.365 -5.486 1.00 5.72 N ATOM 689 CA LYS 88 30.364 15.390 -4.463 1.00 5.72 C ATOM 690 C LYS 88 30.577 15.925 -3.022 1.00 5.72 C ATOM 691 O LYS 88 30.927 15.190 -2.128 1.00 5.72 O ATOM 692 CB LYS 88 31.276 14.179 -4.671 1.00 5.72 C ATOM 693 CG LYS 88 31.071 13.467 -5.998 1.00 5.72 C ATOM 694 CD LYS 88 31.952 12.233 -6.105 1.00 5.72 C ATOM 695 CE LYS 88 31.769 11.539 -7.445 1.00 5.72 C ATOM 696 NZ LYS 88 32.673 10.364 -7.590 1.00 5.72 N ATOM 697 N TYR 89 30.354 17.213 -2.843 1.00 7.10 N ATOM 698 CA TYR 89 30.411 17.832 -1.466 1.00 7.10 C ATOM 699 C TYR 89 29.263 17.277 -0.678 1.00 7.10 C ATOM 700 O TYR 89 28.147 17.147 -1.186 1.00 7.10 O ATOM 701 CB TYR 89 30.358 19.358 -1.561 1.00 7.10 C ATOM 702 CG TYR 89 29.087 19.889 -2.186 1.00 7.10 C ATOM 703 CD1 TYR 89 27.954 20.111 -1.414 1.00 7.10 C ATOM 704 CD2 TYR 89 29.025 20.167 -3.545 1.00 7.10 C ATOM 705 CE1 TYR 89 26.788 20.596 -1.975 1.00 7.10 C ATOM 706 CE2 TYR 89 27.867 20.652 -4.125 1.00 7.10 C ATOM 707 CZ TYR 89 26.744 20.865 -3.325 1.00 7.10 C ATOM 708 OH TYR 89 25.584 21.348 -3.888 1.00 7.10 H ATOM 709 N MET 90 29.529 16.942 0.586 1.00 8.40 N ATOM 710 CA MET 90 28.528 16.389 1.487 1.00 8.40 C ATOM 711 C MET 90 29.148 16.108 2.871 1.00 8.40 C ATOM 712 O MET 90 30.319 16.352 3.073 1.00 8.40 O ATOM 713 CB MET 90 27.926 15.111 0.901 1.00 8.40 C ATOM 714 CG MET 90 26.826 14.496 1.750 1.00 8.40 C ATOM 715 SD MET 90 25.392 15.576 1.918 1.00 8.40 S ATOM 716 CE MET 90 24.728 15.517 0.256 1.00 8.40 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 64.39 56.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 50.86 61.0 118 100.0 118 ARMSMC SURFACE . . . . . . . . 64.73 53.7 108 100.0 108 ARMSMC BURIED . . . . . . . . 63.86 60.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.27 49.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 83.45 48.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 79.49 53.8 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 90.40 40.9 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 71.94 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.78 49.1 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 68.16 52.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 70.12 51.3 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 61.88 54.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 84.49 40.9 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 51.96 54.2 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 51.96 54.2 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 46.61 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 50.66 66.7 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 55.68 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.52 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 80.52 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 83.71 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.82 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 84.27 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.64 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.64 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0515 CRMSCA SECONDARY STRUCTURE . . 3.47 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.01 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.98 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.73 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.66 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.07 269 100.0 269 CRMSMC BURIED . . . . . . . . 4.15 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.87 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.93 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.87 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.77 204 100.0 204 CRMSSC BURIED . . . . . . . . 5.42 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.83 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.87 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.44 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.81 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.883 0.267 0.273 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 1.773 0.296 0.314 59 100.0 59 ERRCA SURFACE . . . . . . . . 1.960 0.250 0.260 55 100.0 55 ERRCA BURIED . . . . . . . . 1.762 0.293 0.294 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.918 0.265 0.270 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 1.818 0.294 0.311 293 100.0 293 ERRMC SURFACE . . . . . . . . 1.955 0.244 0.249 269 100.0 269 ERRMC BURIED . . . . . . . . 1.861 0.298 0.303 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.559 0.244 0.204 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 2.558 0.243 0.202 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 2.287 0.252 0.222 252 100.0 252 ERRSC SURFACE . . . . . . . . 2.888 0.237 0.174 204 100.0 204 ERRSC BURIED . . . . . . . . 2.118 0.254 0.244 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.226 0.257 0.241 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 2.062 0.276 0.270 488 100.0 488 ERRALL SURFACE . . . . . . . . 2.394 0.243 0.218 424 100.0 424 ERRALL BURIED . . . . . . . . 1.982 0.277 0.275 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 11 22 39 60 87 90 90 DISTCA CA (P) 12.22 24.44 43.33 66.67 96.67 90 DISTCA CA (RMS) 0.73 1.16 1.90 2.69 4.25 DISTCA ALL (N) 49 148 267 422 663 716 716 DISTALL ALL (P) 6.84 20.67 37.29 58.94 92.60 716 DISTALL ALL (RMS) 0.74 1.33 1.93 2.80 4.88 DISTALL END of the results output