####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS420_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS420_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 60 31 - 90 4.97 5.90 LCS_AVERAGE: 63.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 4 - 24 1.73 7.02 LCS_AVERAGE: 15.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 73 - 85 0.68 6.70 LCS_AVERAGE: 8.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 28 4 4 4 10 14 19 23 26 37 44 50 55 65 66 68 73 75 77 79 81 LCS_GDT T 2 T 2 4 5 28 4 4 4 4 5 11 12 15 30 35 55 60 65 69 72 73 76 79 81 85 LCS_GDT D 3 D 3 4 5 28 4 4 4 4 14 17 30 34 38 50 57 62 68 69 72 75 79 79 84 86 LCS_GDT L 4 L 4 4 21 53 4 4 7 7 29 35 47 49 57 61 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 5 V 5 8 21 53 4 12 32 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 6 A 6 8 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 7 V 7 8 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT W 8 W 8 8 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT D 9 D 9 8 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 10 V 10 8 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 11 A 11 8 21 53 4 25 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT L 12 L 12 8 21 53 3 9 18 27 37 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT S 13 S 13 6 21 53 3 6 10 17 22 33 39 51 56 60 65 70 72 74 75 78 79 81 83 85 LCS_GDT D 14 D 14 10 21 53 5 21 31 41 43 49 50 51 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 15 G 15 10 21 53 4 14 29 40 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 16 V 16 10 21 53 5 16 29 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT H 17 H 17 10 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 18 K 18 10 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 19 I 19 10 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 20 E 20 10 21 53 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT F 21 F 21 10 21 53 7 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 22 E 22 10 21 53 5 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT H 23 H 23 10 21 53 9 23 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 24 G 24 8 21 53 3 5 29 41 44 49 50 51 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT T 25 T 25 3 4 53 3 3 3 4 4 6 7 9 20 23 37 46 54 59 69 76 79 81 84 86 LCS_GDT T 26 T 26 3 5 53 3 3 4 4 5 6 7 10 13 18 20 27 44 56 63 68 78 81 84 86 LCS_GDT S 27 S 27 4 5 53 3 3 4 4 5 6 7 12 14 18 18 23 29 35 41 56 66 76 84 86 LCS_GDT G 28 G 28 4 5 53 3 3 4 4 5 6 7 12 14 18 18 22 30 33 40 54 65 76 80 86 LCS_GDT K 29 K 29 4 5 53 3 3 4 4 5 6 7 8 10 18 18 22 29 33 40 46 57 69 76 84 LCS_GDT R 30 R 30 4 5 59 3 3 4 5 5 7 10 11 16 18 20 25 29 38 50 62 66 77 84 86 LCS_GDT V 31 V 31 3 5 60 3 3 5 5 5 7 11 14 22 28 47 54 64 67 75 78 79 81 84 86 LCS_GDT V 32 V 32 3 15 60 3 5 13 34 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT Y 33 Y 33 7 15 60 7 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 34 V 34 7 15 60 14 24 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT D 35 D 35 7 15 60 5 15 34 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 36 G 36 7 15 60 5 19 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 37 K 37 7 15 60 5 25 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 38 E 38 7 15 60 6 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 39 E 39 7 15 60 5 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 40 I 40 6 15 60 4 8 17 38 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT R 41 R 41 6 15 60 4 4 10 17 23 32 42 48 54 61 65 70 72 74 75 78 79 81 84 86 LCS_GDT K 42 K 42 6 15 60 4 5 10 17 23 30 37 47 54 61 65 70 72 74 75 78 79 81 84 86 LCS_GDT E 43 E 43 6 15 60 4 5 6 11 20 24 28 38 41 52 59 67 72 74 75 78 79 81 84 86 LCS_GDT W 44 W 44 6 15 60 4 5 6 16 20 24 28 38 41 50 56 63 71 74 75 78 79 81 84 86 LCS_GDT M 45 M 45 4 15 60 3 3 10 18 26 33 40 48 54 61 65 70 72 74 75 78 79 81 84 86 LCS_GDT F 46 F 46 4 15 60 3 5 10 17 20 24 32 40 52 55 59 66 71 74 75 78 79 81 84 86 LCS_GDT K 47 K 47 4 7 60 4 4 4 8 15 33 40 48 54 61 65 70 72 74 75 78 79 81 84 86 LCS_GDT L 48 L 48 4 8 60 4 4 4 5 7 12 14 47 53 61 65 70 72 74 75 78 79 81 84 86 LCS_GDT V 49 V 49 7 10 60 4 10 15 34 41 47 50 51 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 50 G 50 8 10 60 4 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 51 K 51 8 10 60 3 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 52 E 52 8 10 60 5 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT T 53 T 53 8 11 60 5 22 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT F 54 F 54 8 11 60 5 21 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT Y 55 Y 55 8 11 60 5 8 25 39 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT V 56 V 56 8 11 60 5 8 25 39 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 57 G 57 8 11 60 4 7 11 20 35 43 46 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 58 A 58 6 12 60 3 4 7 10 20 37 45 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 59 A 59 6 12 60 3 5 8 13 20 27 44 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 60 K 60 5 12 60 3 5 9 12 20 27 39 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT T 61 T 61 5 12 60 3 7 9 12 19 27 39 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 62 K 62 8 12 60 3 5 8 10 19 25 28 47 57 62 66 68 72 74 75 78 79 81 84 86 LCS_GDT A 63 A 63 8 12 60 3 5 9 10 19 25 37 52 57 62 66 69 72 74 75 78 79 81 84 86 LCS_GDT T 64 T 64 8 12 60 3 7 9 12 20 27 40 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 65 I 65 8 12 60 5 7 9 10 12 27 40 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT N 66 N 66 8 12 60 5 7 9 10 12 27 39 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 67 I 67 8 12 60 5 7 9 10 12 20 39 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT D 68 D 68 8 12 60 5 7 9 10 12 26 39 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 69 A 69 8 12 60 5 7 9 10 12 26 40 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 70 I 70 4 12 60 3 4 6 8 12 12 14 30 47 61 64 65 68 72 75 78 79 81 84 86 LCS_GDT S 71 S 71 4 13 60 3 4 4 4 12 16 21 26 32 36 45 52 66 72 74 78 79 81 84 86 LCS_GDT G 72 G 72 4 14 60 3 4 4 6 8 11 22 28 39 44 50 52 67 72 75 78 79 81 84 86 LCS_GDT F 73 F 73 13 15 60 5 23 34 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT A 74 A 74 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT Y 75 Y 75 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 76 E 76 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT Y 77 Y 77 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT T 78 T 78 13 15 60 7 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT L 79 L 79 13 15 60 9 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT E 80 E 80 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT I 81 I 81 13 15 60 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT N 82 N 82 13 15 60 5 23 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT G 83 G 83 13 15 60 5 20 30 41 44 49 50 51 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 84 K 84 13 15 60 14 23 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT S 85 S 85 13 15 60 13 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT L 86 L 86 10 15 60 3 8 22 41 43 49 50 51 60 62 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 87 K 87 6 15 60 3 5 10 17 23 32 41 50 54 58 66 70 72 74 75 78 79 81 84 86 LCS_GDT K 88 K 88 6 15 60 3 6 13 24 30 42 47 51 54 61 66 70 72 74 75 78 79 81 84 86 LCS_GDT Y 89 Y 89 6 13 60 3 4 6 14 16 21 28 35 45 47 53 60 65 69 75 78 79 80 83 86 LCS_GDT M 90 M 90 3 13 60 0 3 3 10 14 31 40 44 48 55 64 68 72 73 75 78 79 81 84 86 LCS_AVERAGE LCS_A: 29.14 ( 8.47 15.73 63.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 26 35 41 44 49 50 52 60 62 66 70 72 74 75 78 79 81 84 86 GDT PERCENT_AT 16.67 28.89 38.89 45.56 48.89 54.44 55.56 57.78 66.67 68.89 73.33 77.78 80.00 82.22 83.33 86.67 87.78 90.00 93.33 95.56 GDT RMS_LOCAL 0.35 0.68 0.93 1.12 1.30 1.52 1.59 2.41 2.63 2.75 2.97 3.44 3.54 3.77 3.89 4.20 4.35 4.54 5.07 5.28 GDT RMS_ALL_AT 6.10 5.89 5.93 5.96 5.93 5.94 5.91 6.03 5.96 6.07 6.00 5.82 5.85 5.84 5.84 5.80 5.82 5.81 5.73 5.71 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 38 E 38 # possible swapping detected: D 68 D 68 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 12.340 0 0.537 1.171 16.950 1.190 0.595 LGA T 2 T 2 11.443 0 0.078 1.243 15.845 0.357 0.204 LGA D 3 D 3 9.837 0 0.327 1.085 15.245 5.238 2.619 LGA L 4 L 4 5.408 0 0.618 1.399 10.254 38.452 22.024 LGA V 5 V 5 1.442 0 0.686 1.484 6.072 75.119 54.422 LGA A 6 A 6 0.270 0 0.071 0.067 0.594 97.619 98.095 LGA V 7 V 7 0.723 0 0.055 0.084 1.016 90.476 89.184 LGA W 8 W 8 0.578 0 0.049 0.107 0.860 90.476 95.918 LGA D 9 D 9 0.743 0 0.055 0.918 3.644 90.476 77.202 LGA V 10 V 10 0.975 0 0.093 0.177 1.233 85.952 85.306 LGA A 11 A 11 2.280 0 0.074 0.078 3.117 61.190 61.905 LGA L 12 L 12 4.073 0 0.070 1.454 5.656 33.690 40.298 LGA S 13 S 13 6.803 0 0.334 0.584 8.990 17.381 12.857 LGA D 14 D 14 3.999 0 0.187 1.048 6.672 40.238 31.667 LGA G 15 G 15 3.907 0 0.126 0.126 3.907 45.000 45.000 LGA V 16 V 16 3.278 0 0.134 1.105 5.321 50.119 46.667 LGA H 17 H 17 1.780 0 0.129 1.063 5.167 72.976 57.429 LGA K 18 K 18 1.865 0 0.099 1.363 4.942 70.833 60.529 LGA I 19 I 19 1.615 0 0.028 0.501 3.381 77.143 71.131 LGA E 20 E 20 0.934 0 0.024 0.787 3.176 88.214 73.810 LGA F 21 F 21 0.859 0 0.068 0.442 2.677 90.476 77.316 LGA E 22 E 22 1.104 0 0.044 0.863 3.418 85.952 74.444 LGA H 23 H 23 1.300 0 0.630 1.169 8.778 75.357 43.571 LGA G 24 G 24 2.763 0 0.574 0.574 4.987 46.190 46.190 LGA T 25 T 25 9.564 0 0.092 0.132 12.654 2.619 1.497 LGA T 26 T 26 11.498 0 0.387 1.350 13.839 0.000 0.000 LGA S 27 S 27 12.975 0 0.550 0.698 13.642 0.000 0.000 LGA G 28 G 28 12.870 0 0.719 0.719 12.999 0.000 0.000 LGA K 29 K 29 14.126 0 0.315 1.179 16.183 0.000 0.000 LGA R 30 R 30 13.346 0 0.579 1.722 21.449 0.000 0.000 LGA V 31 V 31 10.033 0 0.145 1.147 13.392 4.286 2.449 LGA V 32 V 32 2.860 0 0.580 1.458 5.351 57.262 66.531 LGA Y 33 Y 33 0.994 0 0.193 1.388 5.430 77.381 64.127 LGA V 34 V 34 2.502 0 0.135 0.199 4.544 71.071 58.435 LGA D 35 D 35 2.023 0 0.119 0.957 5.819 68.810 54.762 LGA G 36 G 36 1.603 0 0.094 0.094 1.711 77.143 77.143 LGA K 37 K 37 0.856 0 0.027 0.732 2.857 88.214 78.942 LGA E 38 E 38 0.615 0 0.075 0.996 4.560 92.857 70.106 LGA E 39 E 39 1.096 0 0.645 0.884 2.414 79.524 78.730 LGA I 40 I 40 2.861 0 0.064 1.047 6.684 39.762 31.786 LGA R 41 R 41 6.829 0 0.157 1.748 7.988 21.071 13.853 LGA K 42 K 42 8.431 0 0.634 0.934 9.388 3.810 2.963 LGA E 43 E 43 10.099 0 0.384 0.805 10.811 0.119 0.847 LGA W 44 W 44 12.145 0 0.070 1.401 18.394 0.000 0.000 LGA M 45 M 45 9.076 0 0.082 0.308 12.002 0.357 16.012 LGA F 46 F 46 12.299 0 0.628 0.851 20.032 0.000 0.000 LGA K 47 K 47 9.488 0 0.583 1.022 10.582 1.071 0.741 LGA L 48 L 48 9.289 0 0.462 0.425 14.452 3.452 1.726 LGA V 49 V 49 4.715 0 0.124 1.015 7.767 40.000 28.844 LGA G 50 G 50 1.573 0 0.330 0.330 2.131 70.833 70.833 LGA K 51 K 51 1.729 0 0.167 0.962 3.244 75.000 72.275 LGA E 52 E 52 0.871 0 0.111 0.535 4.127 88.214 72.169 LGA T 53 T 53 0.930 0 0.093 1.123 3.403 90.476 78.639 LGA F 54 F 54 0.849 0 0.085 0.478 1.825 85.952 85.584 LGA Y 55 Y 55 1.727 0 0.021 1.326 7.883 75.000 52.381 LGA V 56 V 56 2.027 0 0.107 0.226 2.472 68.810 68.231 LGA G 57 G 57 3.805 0 0.150 0.150 3.805 45.000 45.000 LGA A 58 A 58 4.855 0 0.049 0.048 5.575 31.548 29.524 LGA A 59 A 59 4.065 0 0.673 0.626 4.237 41.786 40.857 LGA K 60 K 60 4.810 0 0.426 1.457 14.808 32.857 16.825 LGA T 61 T 61 4.630 0 0.199 1.189 6.616 34.286 33.129 LGA K 62 K 62 5.290 0 0.103 1.109 5.507 26.190 32.116 LGA A 63 A 63 5.271 0 0.121 0.138 6.023 27.500 25.429 LGA T 64 T 64 4.112 0 0.046 1.105 6.191 37.143 38.027 LGA I 65 I 65 4.497 0 0.099 0.752 4.789 32.857 32.143 LGA N 66 N 66 4.479 0 0.036 1.534 8.281 32.857 25.952 LGA I 67 I 67 4.740 0 0.049 1.452 9.007 31.429 23.095 LGA D 68 D 68 4.543 0 0.056 1.192 8.414 34.286 25.000 LGA A 69 A 69 4.363 0 0.175 0.222 5.800 29.286 33.429 LGA I 70 I 70 8.745 0 0.560 1.603 13.785 5.119 2.560 LGA S 71 S 71 10.545 0 0.376 0.479 13.668 0.357 0.238 LGA G 72 G 72 9.890 0 0.215 0.215 9.890 5.238 5.238 LGA F 73 F 73 2.753 0 0.402 1.118 6.475 55.238 44.372 LGA A 74 A 74 2.378 0 0.115 0.163 2.693 62.857 61.714 LGA Y 75 Y 75 1.946 0 0.031 1.066 6.447 70.833 54.365 LGA E 76 E 76 1.438 0 0.048 0.629 3.531 77.143 69.788 LGA Y 77 Y 77 1.318 0 0.040 0.164 2.139 83.690 75.794 LGA T 78 T 78 1.393 0 0.030 1.038 2.768 81.429 75.510 LGA L 79 L 79 1.470 0 0.067 0.998 2.415 81.429 77.202 LGA E 80 E 80 1.868 0 0.056 0.966 3.656 70.833 65.979 LGA I 81 I 81 1.945 0 0.055 0.182 2.345 72.857 70.833 LGA N 82 N 82 2.269 0 0.050 0.433 2.518 62.857 64.821 LGA G 83 G 83 2.622 0 0.112 0.112 2.622 60.952 60.952 LGA K 84 K 84 2.144 0 0.041 1.002 5.456 68.810 51.905 LGA S 85 S 85 1.478 0 0.067 0.571 3.680 63.690 64.048 LGA L 86 L 86 3.924 0 0.062 1.206 8.116 46.905 36.786 LGA K 87 K 87 6.409 0 0.049 0.806 14.939 19.286 9.101 LGA K 88 K 88 5.168 0 0.073 1.301 8.868 15.119 41.852 LGA Y 89 Y 89 9.275 0 0.606 1.270 13.863 5.833 1.944 LGA M 90 M 90 7.690 0 0.258 0.812 13.542 5.357 2.738 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 5.684 5.586 6.567 46.290 41.736 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 52 2.41 54.722 47.261 2.074 LGA_LOCAL RMSD: 2.407 Number of atoms: 52 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.025 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 5.684 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.055297 * X + 0.839169 * Y + 0.541053 * Z + 40.063824 Y_new = 0.391807 * X + -0.480181 * Y + 0.784802 * Z + 17.665724 Z_new = 0.918384 * X + 0.255386 * Y + -0.302239 * Z + -2.057129 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.711004 -1.163977 2.440022 [DEG: 98.0333 -66.6910 139.8029 ] ZXZ: 2.538007 1.877837 1.299568 [DEG: 145.4171 107.5922 74.4597 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS420_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS420_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 52 2.41 47.261 5.68 REMARK ---------------------------------------------------------- MOLECULE T0540TS420_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2kd2_A ATOM 1 N MET 1 26.490 7.963 5.465 1.00 0.00 N ATOM 2 CA MET 1 26.664 7.398 4.109 1.00 0.00 C ATOM 3 CB MET 1 25.292 7.255 3.424 1.00 0.00 C ATOM 4 CG MET 1 25.309 6.411 2.149 1.00 0.00 C ATOM 5 SD MET 1 23.670 6.178 1.396 1.00 0.00 S ATOM 6 CE MET 1 24.185 4.847 0.272 1.00 0.00 C ATOM 7 C MET 1 27.523 8.314 3.304 1.00 0.00 C ATOM 8 O MET 1 28.631 8.660 3.709 1.00 0.00 O ATOM 9 N THR 2 27.022 8.714 2.123 1.00 0.00 N ATOM 10 CA THR 2 27.724 9.607 1.253 1.00 0.00 C ATOM 11 CB THR 2 27.049 9.776 -0.077 1.00 0.00 C ATOM 12 OG1 THR 2 27.885 10.507 -0.963 1.00 0.00 O ATOM 13 CG2 THR 2 25.714 10.514 0.128 1.00 0.00 C ATOM 14 C THR 2 27.783 10.948 1.908 1.00 0.00 C ATOM 15 O THR 2 28.754 11.682 1.754 1.00 0.00 O ATOM 16 N ASP 3 26.736 11.300 2.671 1.00 0.00 N ATOM 17 CA ASP 3 26.635 12.611 3.244 1.00 0.00 C ATOM 18 CB ASP 3 25.319 12.825 4.012 1.00 0.00 C ATOM 19 CG ASP 3 24.196 12.846 2.986 1.00 0.00 C ATOM 20 OD1 ASP 3 24.506 12.737 1.769 1.00 0.00 O ATOM 21 OD2 ASP 3 23.013 12.974 3.404 1.00 0.00 O ATOM 22 C ASP 3 27.767 12.888 4.189 1.00 0.00 C ATOM 23 O ASP 3 28.264 14.011 4.243 1.00 0.00 O ATOM 24 N LEU 4 28.214 11.879 4.956 1.00 0.00 N ATOM 25 CA LEU 4 29.221 12.095 5.959 1.00 0.00 C ATOM 26 CB LEU 4 29.472 10.854 6.828 1.00 0.00 C ATOM 27 CG LEU 4 28.245 10.478 7.681 1.00 0.00 C ATOM 28 CD1 LEU 4 28.538 9.285 8.606 1.00 0.00 C ATOM 29 CD2 LEU 4 27.700 11.701 8.440 1.00 0.00 C ATOM 30 C LEU 4 30.524 12.531 5.355 1.00 0.00 C ATOM 31 O LEU 4 31.218 13.371 5.925 1.00 0.00 O ATOM 32 N VAL 5 30.913 11.971 4.194 1.00 0.00 N ATOM 33 CA VAL 5 32.178 12.350 3.629 1.00 0.00 C ATOM 34 CB VAL 5 33.019 11.172 3.234 1.00 0.00 C ATOM 35 CG1 VAL 5 32.307 10.424 2.093 1.00 0.00 C ATOM 36 CG2 VAL 5 34.428 11.666 2.863 1.00 0.00 C ATOM 37 C VAL 5 31.922 13.134 2.381 1.00 0.00 C ATOM 38 O VAL 5 30.994 12.845 1.633 1.00 0.00 O ATOM 39 N ALA 6 32.746 14.166 2.116 1.00 0.00 N ATOM 40 CA ALA 6 32.530 14.944 0.930 1.00 0.00 C ATOM 41 CB ALA 6 32.411 16.453 1.195 1.00 0.00 C ATOM 42 C ALA 6 33.708 14.735 0.034 1.00 0.00 C ATOM 43 O ALA 6 34.827 14.536 0.505 1.00 0.00 O ATOM 44 N VAL 7 33.477 14.744 -1.295 1.00 0.00 N ATOM 45 CA VAL 7 34.568 14.543 -2.201 1.00 0.00 C ATOM 46 CB VAL 7 34.592 13.166 -2.800 1.00 0.00 C ATOM 47 CG1 VAL 7 35.739 13.092 -3.823 1.00 0.00 C ATOM 48 CG2 VAL 7 34.703 12.139 -1.662 1.00 0.00 C ATOM 49 C VAL 7 34.418 15.505 -3.333 1.00 0.00 C ATOM 50 O VAL 7 33.310 15.927 -3.664 1.00 0.00 O ATOM 51 N TRP 8 35.554 15.909 -3.939 1.00 0.00 N ATOM 52 CA TRP 8 35.470 16.778 -5.072 1.00 0.00 C ATOM 53 CB TRP 8 35.615 18.265 -4.701 1.00 0.00 C ATOM 54 CG TRP 8 34.462 18.765 -3.858 1.00 0.00 C ATOM 55 CD2 TRP 8 34.453 18.798 -2.420 1.00 0.00 C ATOM 56 CD1 TRP 8 33.256 19.264 -4.258 1.00 0.00 C ATOM 57 NE1 TRP 8 32.495 19.596 -3.163 1.00 0.00 N ATOM 58 CE2 TRP 8 33.220 19.318 -2.025 1.00 0.00 C ATOM 59 CE3 TRP 8 35.394 18.429 -1.503 1.00 0.00 C ATOM 60 CZ2 TRP 8 32.912 19.474 -0.702 1.00 0.00 C ATOM 61 CZ3 TRP 8 35.080 18.590 -0.172 1.00 0.00 C ATOM 62 CH2 TRP 8 33.862 19.102 0.222 1.00 0.00 C ATOM 63 C TRP 8 36.556 16.384 -6.022 1.00 0.00 C ATOM 64 O TRP 8 37.671 16.059 -5.614 1.00 0.00 O ATOM 65 N ASP 9 36.246 16.383 -7.335 1.00 0.00 N ATOM 66 CA ASP 9 37.218 15.974 -8.306 1.00 0.00 C ATOM 67 CB ASP 9 36.708 14.859 -9.236 1.00 0.00 C ATOM 68 CG ASP 9 37.843 14.453 -10.164 1.00 0.00 C ATOM 69 OD1 ASP 9 39.024 14.664 -9.779 1.00 0.00 O ATOM 70 OD2 ASP 9 37.544 13.921 -11.266 1.00 0.00 O ATOM 71 C ASP 9 37.538 17.147 -9.174 1.00 0.00 C ATOM 72 O ASP 9 36.678 17.651 -9.894 1.00 0.00 O ATOM 73 N VAL 10 38.795 17.622 -9.119 1.00 0.00 N ATOM 74 CA VAL 10 39.179 18.710 -9.967 1.00 0.00 C ATOM 75 CB VAL 10 39.300 20.021 -9.250 1.00 0.00 C ATOM 76 CG1 VAL 10 37.906 20.427 -8.747 1.00 0.00 C ATOM 77 CG2 VAL 10 40.348 19.873 -8.134 1.00 0.00 C ATOM 78 C VAL 10 40.524 18.378 -10.514 1.00 0.00 C ATOM 79 O VAL 10 41.313 17.681 -9.877 1.00 0.00 O ATOM 80 N ALA 11 40.826 18.861 -11.733 1.00 0.00 N ATOM 81 CA ALA 11 42.122 18.556 -12.250 1.00 0.00 C ATOM 82 CB ALA 11 42.218 18.659 -13.782 1.00 0.00 C ATOM 83 C ALA 11 43.041 19.569 -11.669 1.00 0.00 C ATOM 84 O ALA 11 42.989 20.749 -12.014 1.00 0.00 O ATOM 85 N LEU 12 43.909 19.121 -10.744 1.00 0.00 N ATOM 86 CA LEU 12 44.825 20.026 -10.125 1.00 0.00 C ATOM 87 CB LEU 12 44.550 20.258 -8.630 1.00 0.00 C ATOM 88 CG LEU 12 45.477 21.311 -7.997 1.00 0.00 C ATOM 89 CD1 LEU 12 45.197 22.714 -8.564 1.00 0.00 C ATOM 90 CD2 LEU 12 45.414 21.263 -6.463 1.00 0.00 C ATOM 91 C LEU 12 46.172 19.403 -10.235 1.00 0.00 C ATOM 92 O LEU 12 46.298 18.184 -10.334 1.00 0.00 O ATOM 93 N SER 13 47.220 20.245 -10.230 1.00 0.00 N ATOM 94 CA SER 13 48.561 19.753 -10.323 1.00 0.00 C ATOM 95 CB SER 13 48.960 18.853 -9.141 1.00 0.00 C ATOM 96 OG SER 13 48.971 19.604 -7.936 1.00 0.00 O ATOM 97 C SER 13 48.682 18.964 -11.586 1.00 0.00 C ATOM 98 O SER 13 49.466 18.021 -11.668 1.00 0.00 O ATOM 99 N ASP 14 47.919 19.361 -12.623 1.00 0.00 N ATOM 100 CA ASP 14 47.967 18.685 -13.886 1.00 0.00 C ATOM 101 CB ASP 14 49.299 18.880 -14.635 1.00 0.00 C ATOM 102 CG ASP 14 49.347 20.317 -15.137 1.00 0.00 C ATOM 103 OD1 ASP 14 48.289 21.000 -15.084 1.00 0.00 O ATOM 104 OD2 ASP 14 50.444 20.749 -15.585 1.00 0.00 O ATOM 105 C ASP 14 47.758 17.224 -13.664 1.00 0.00 C ATOM 106 O ASP 14 48.472 16.391 -14.220 1.00 0.00 O ATOM 107 N GLY 15 46.755 16.875 -12.838 1.00 0.00 N ATOM 108 CA GLY 15 46.461 15.495 -12.604 1.00 0.00 C ATOM 109 C GLY 15 45.112 15.457 -11.976 1.00 0.00 C ATOM 110 O GLY 15 44.623 16.467 -11.473 1.00 0.00 O ATOM 111 N VAL 16 44.464 14.279 -11.983 1.00 0.00 N ATOM 112 CA VAL 16 43.176 14.237 -11.372 1.00 0.00 C ATOM 113 CB VAL 16 42.449 12.938 -11.599 1.00 0.00 C ATOM 114 CG1 VAL 16 43.310 11.772 -11.079 1.00 0.00 C ATOM 115 CG2 VAL 16 41.071 13.032 -10.926 1.00 0.00 C ATOM 116 C VAL 16 43.402 14.429 -9.912 1.00 0.00 C ATOM 117 O VAL 16 44.098 13.657 -9.256 1.00 0.00 O ATOM 118 N HIS 17 42.804 15.493 -9.359 1.00 0.00 N ATOM 119 CA HIS 17 42.994 15.768 -7.971 1.00 0.00 C ATOM 120 ND1 HIS 17 44.944 17.873 -6.091 1.00 0.00 N ATOM 121 CG HIS 17 43.613 17.654 -6.364 1.00 0.00 C ATOM 122 CB HIS 17 43.088 17.281 -7.713 1.00 0.00 C ATOM 123 NE2 HIS 17 43.838 18.217 -4.196 1.00 0.00 N ATOM 124 CD2 HIS 17 42.953 17.867 -5.196 1.00 0.00 C ATOM 125 CE1 HIS 17 45.023 18.208 -4.778 1.00 0.00 C ATOM 126 C HIS 17 41.768 15.240 -7.296 1.00 0.00 C ATOM 127 O HIS 17 40.659 15.660 -7.622 1.00 0.00 O ATOM 128 N LYS 18 41.932 14.275 -6.364 1.00 0.00 N ATOM 129 CA LYS 18 40.781 13.722 -5.706 1.00 0.00 C ATOM 130 CB LYS 18 40.796 12.190 -5.578 1.00 0.00 C ATOM 131 CG LYS 18 40.832 11.442 -6.909 1.00 0.00 C ATOM 132 CD LYS 18 41.101 9.945 -6.742 1.00 0.00 C ATOM 133 CE LYS 18 42.127 9.624 -5.653 1.00 0.00 C ATOM 134 NZ LYS 18 43.427 10.261 -5.966 1.00 0.00 N ATOM 135 C LYS 18 40.784 14.227 -4.308 1.00 0.00 C ATOM 136 O LYS 18 41.576 13.766 -3.488 1.00 0.00 O ATOM 137 N ILE 19 39.815 15.119 -4.019 1.00 0.00 N ATOM 138 CA ILE 19 39.626 15.878 -2.812 1.00 0.00 C ATOM 139 CB ILE 19 38.886 17.143 -3.102 1.00 0.00 C ATOM 140 CG2 ILE 19 38.200 17.580 -1.801 1.00 0.00 C ATOM 141 CG1 ILE 19 39.737 18.157 -3.881 1.00 0.00 C ATOM 142 CD1 ILE 19 39.972 17.748 -5.333 1.00 0.00 C ATOM 143 C ILE 19 38.667 15.163 -1.923 1.00 0.00 C ATOM 144 O ILE 19 37.602 14.742 -2.370 1.00 0.00 O ATOM 145 N GLU 20 39.024 15.009 -0.630 1.00 0.00 N ATOM 146 CA GLU 20 38.054 14.452 0.261 1.00 0.00 C ATOM 147 CB GLU 20 38.262 12.974 0.645 1.00 0.00 C ATOM 148 CG GLU 20 39.527 12.677 1.447 1.00 0.00 C ATOM 149 CD GLU 20 39.352 11.302 2.081 1.00 0.00 C ATOM 150 OE1 GLU 20 38.176 10.891 2.271 1.00 0.00 O ATOM 151 OE2 GLU 20 40.383 10.649 2.392 1.00 0.00 O ATOM 152 C GLU 20 38.037 15.248 1.523 1.00 0.00 C ATOM 153 O GLU 20 39.067 15.705 2.020 1.00 0.00 O ATOM 154 N PHE 21 36.814 15.454 2.044 1.00 0.00 N ATOM 155 CA PHE 21 36.561 16.127 3.280 1.00 0.00 C ATOM 156 CB PHE 21 35.432 17.166 3.156 1.00 0.00 C ATOM 157 CG PHE 21 34.888 17.407 4.523 1.00 0.00 C ATOM 158 CD1 PHE 21 35.552 18.181 5.447 1.00 0.00 C ATOM 159 CD2 PHE 21 33.678 16.851 4.868 1.00 0.00 C ATOM 160 CE1 PHE 21 35.018 18.379 6.699 1.00 0.00 C ATOM 161 CE2 PHE 21 33.139 17.046 6.117 1.00 0.00 C ATOM 162 CZ PHE 21 33.811 17.813 7.036 1.00 0.00 C ATOM 163 C PHE 21 36.070 15.091 4.231 1.00 0.00 C ATOM 164 O PHE 21 34.972 14.563 4.075 1.00 0.00 O ATOM 165 N GLU 22 36.880 14.771 5.253 1.00 0.00 N ATOM 166 CA GLU 22 36.447 13.817 6.222 1.00 0.00 C ATOM 167 CB GLU 22 37.585 12.889 6.676 1.00 0.00 C ATOM 168 CG GLU 22 38.870 13.644 7.003 1.00 0.00 C ATOM 169 CD GLU 22 40.020 12.649 7.026 1.00 0.00 C ATOM 170 OE1 GLU 22 40.341 12.098 5.938 1.00 0.00 O ATOM 171 OE2 GLU 22 40.596 12.425 8.124 1.00 0.00 O ATOM 172 C GLU 22 35.885 14.616 7.349 1.00 0.00 C ATOM 173 O GLU 22 36.504 15.564 7.829 1.00 0.00 O ATOM 174 N HIS 23 34.660 14.252 7.771 1.00 0.00 N ATOM 175 CA HIS 23 33.913 15.003 8.735 1.00 0.00 C ATOM 176 ND1 HIS 23 32.350 12.002 8.486 1.00 0.00 N ATOM 177 CG HIS 23 32.373 13.076 9.347 1.00 0.00 C ATOM 178 CB HIS 23 32.468 14.503 8.901 1.00 0.00 C ATOM 179 NE2 HIS 23 32.210 11.171 10.544 1.00 0.00 N ATOM 180 CD2 HIS 23 32.287 12.551 10.600 1.00 0.00 C ATOM 181 CE1 HIS 23 32.252 10.888 9.254 1.00 0.00 C ATOM 182 C HIS 23 34.559 15.007 10.082 1.00 0.00 C ATOM 183 O HIS 23 34.594 16.048 10.735 1.00 0.00 O ATOM 184 N GLY 24 35.094 13.861 10.542 1.00 0.00 N ATOM 185 CA GLY 24 35.581 13.846 11.892 1.00 0.00 C ATOM 186 C GLY 24 36.676 14.851 12.058 1.00 0.00 C ATOM 187 O GLY 24 36.641 15.673 12.972 1.00 0.00 O ATOM 188 N THR 25 37.682 14.811 11.171 1.00 0.00 N ATOM 189 CA THR 25 38.768 15.743 11.237 1.00 0.00 C ATOM 190 CB THR 25 39.967 15.344 10.432 1.00 0.00 C ATOM 191 OG1 THR 25 39.648 15.341 9.052 1.00 0.00 O ATOM 192 CG2 THR 25 40.419 13.945 10.885 1.00 0.00 C ATOM 193 C THR 25 38.292 17.059 10.726 1.00 0.00 C ATOM 194 O THR 25 38.867 18.095 11.050 1.00 0.00 O ATOM 195 N THR 26 37.230 17.015 9.892 1.00 0.00 N ATOM 196 CA THR 26 36.676 18.126 9.168 1.00 0.00 C ATOM 197 CB THR 26 36.210 19.310 9.984 1.00 0.00 C ATOM 198 OG1 THR 26 37.295 20.044 10.529 1.00 0.00 O ATOM 199 CG2 THR 26 35.304 18.789 11.112 1.00 0.00 C ATOM 200 C THR 26 37.751 18.560 8.244 1.00 0.00 C ATOM 201 O THR 26 37.863 19.728 7.873 1.00 0.00 O ATOM 202 N SER 27 38.581 17.580 7.850 1.00 0.00 N ATOM 203 CA SER 27 39.607 17.855 6.907 1.00 0.00 C ATOM 204 CB SER 27 40.769 16.846 6.998 1.00 0.00 C ATOM 205 OG SER 27 41.478 17.025 8.216 1.00 0.00 O ATOM 206 C SER 27 38.940 17.685 5.577 1.00 0.00 C ATOM 207 O SER 27 38.785 16.565 5.098 1.00 0.00 O ATOM 208 N GLY 28 38.546 18.806 4.934 1.00 0.00 N ATOM 209 CA GLY 28 37.858 18.754 3.671 1.00 0.00 C ATOM 210 C GLY 28 38.932 18.729 2.651 1.00 0.00 C ATOM 211 O GLY 28 39.959 18.099 2.890 1.00 0.00 O ATOM 212 N LYS 29 38.760 19.348 1.462 1.00 0.00 N ATOM 213 CA LYS 29 39.979 19.326 0.714 1.00 0.00 C ATOM 214 CB LYS 29 40.347 17.937 0.182 1.00 0.00 C ATOM 215 CG LYS 29 41.827 17.776 -0.175 1.00 0.00 C ATOM 216 CD LYS 29 42.441 18.728 -1.188 1.00 0.00 C ATOM 217 CE LYS 29 43.950 18.585 -1.407 1.00 0.00 C ATOM 218 NZ LYS 29 44.620 18.042 -0.210 1.00 0.00 N ATOM 219 C LYS 29 39.983 20.198 -0.501 1.00 0.00 C ATOM 220 O LYS 29 39.922 19.677 -1.612 1.00 0.00 O ATOM 221 N ARG 30 40.007 21.537 -0.425 1.00 0.00 N ATOM 222 CA ARG 30 40.463 21.980 -1.706 1.00 0.00 C ATOM 223 CB ARG 30 40.350 23.459 -2.091 1.00 0.00 C ATOM 224 CG ARG 30 40.542 23.597 -3.610 1.00 0.00 C ATOM 225 CD ARG 30 41.967 23.291 -4.074 1.00 0.00 C ATOM 226 NE ARG 30 42.039 23.436 -5.556 1.00 0.00 N ATOM 227 CZ ARG 30 41.946 22.330 -6.352 1.00 0.00 C ATOM 228 NH1 ARG 30 41.733 21.105 -5.792 1.00 0.00 N ATOM 229 NH2 ARG 30 42.090 22.446 -7.705 1.00 0.00 N ATOM 230 C ARG 30 41.886 21.582 -1.582 1.00 0.00 C ATOM 231 O ARG 30 42.514 21.106 -2.526 1.00 0.00 O ATOM 232 N VAL 31 42.422 21.777 -0.355 1.00 0.00 N ATOM 233 CA VAL 31 43.650 21.133 -0.017 1.00 0.00 C ATOM 234 CB VAL 31 44.905 21.898 -0.371 1.00 0.00 C ATOM 235 CG1 VAL 31 45.201 23.053 0.590 1.00 0.00 C ATOM 236 CG2 VAL 31 46.045 20.897 -0.580 1.00 0.00 C ATOM 237 C VAL 31 43.568 20.703 1.427 1.00 0.00 C ATOM 238 O VAL 31 43.843 21.471 2.347 1.00 0.00 O ATOM 239 N VAL 32 43.137 19.444 1.671 1.00 0.00 N ATOM 240 CA VAL 32 43.075 18.942 3.002 1.00 0.00 C ATOM 241 CB VAL 32 42.179 19.724 3.924 1.00 0.00 C ATOM 242 CG1 VAL 32 41.167 20.544 3.120 1.00 0.00 C ATOM 243 CG2 VAL 32 41.602 18.795 4.968 1.00 0.00 C ATOM 244 C VAL 32 43.134 17.444 3.002 1.00 0.00 C ATOM 245 O VAL 32 44.014 16.878 3.639 1.00 0.00 O ATOM 246 N TYR 33 42.228 16.712 2.340 1.00 0.00 N ATOM 247 CA TYR 33 42.624 15.344 2.171 1.00 0.00 C ATOM 248 CB TYR 33 41.595 14.343 2.717 1.00 0.00 C ATOM 249 CG TYR 33 42.257 13.008 2.755 1.00 0.00 C ATOM 250 CD1 TYR 33 42.448 12.274 1.607 1.00 0.00 C ATOM 251 CD2 TYR 33 42.685 12.491 3.956 1.00 0.00 C ATOM 252 CE1 TYR 33 43.059 11.042 1.663 1.00 0.00 C ATOM 253 CE2 TYR 33 43.297 11.260 4.018 1.00 0.00 C ATOM 254 CZ TYR 33 43.485 10.535 2.868 1.00 0.00 C ATOM 255 OH TYR 33 44.113 9.271 2.929 1.00 0.00 O ATOM 256 C TYR 33 42.793 15.078 0.684 1.00 0.00 C ATOM 257 O TYR 33 41.814 14.803 -0.008 1.00 0.00 O ATOM 258 N VAL 34 44.037 15.174 0.144 1.00 0.00 N ATOM 259 CA VAL 34 44.310 14.790 -1.230 1.00 0.00 C ATOM 260 CB VAL 34 44.037 15.826 -2.311 1.00 0.00 C ATOM 261 CG1 VAL 34 44.531 15.414 -3.710 1.00 0.00 C ATOM 262 CG2 VAL 34 42.536 16.044 -2.383 1.00 0.00 C ATOM 263 C VAL 34 45.758 14.415 -1.321 1.00 0.00 C ATOM 264 O VAL 34 46.577 14.839 -0.507 1.00 0.00 O ATOM 265 N ASP 35 46.104 13.595 -2.332 1.00 0.00 N ATOM 266 CA ASP 35 47.449 13.195 -2.582 1.00 0.00 C ATOM 267 CB ASP 35 48.408 14.399 -2.623 1.00 0.00 C ATOM 268 CG ASP 35 49.727 13.964 -3.242 1.00 0.00 C ATOM 269 OD1 ASP 35 49.882 12.748 -3.532 1.00 0.00 O ATOM 270 OD2 ASP 35 50.599 14.853 -3.437 1.00 0.00 O ATOM 271 C ASP 35 47.848 12.308 -1.459 1.00 0.00 C ATOM 272 O ASP 35 49.028 12.024 -1.259 1.00 0.00 O ATOM 273 N GLY 36 46.845 11.833 -0.700 1.00 0.00 N ATOM 274 CA GLY 36 47.098 10.904 0.357 1.00 0.00 C ATOM 275 C GLY 36 47.786 11.621 1.468 1.00 0.00 C ATOM 276 O GLY 36 48.271 10.992 2.407 1.00 0.00 O ATOM 277 N LYS 37 47.858 12.963 1.397 1.00 0.00 N ATOM 278 CA LYS 37 48.514 13.646 2.469 1.00 0.00 C ATOM 279 CB LYS 37 49.806 14.363 2.043 1.00 0.00 C ATOM 280 CG LYS 37 50.578 14.977 3.213 1.00 0.00 C ATOM 281 CD LYS 37 52.040 15.280 2.882 1.00 0.00 C ATOM 282 CE LYS 37 52.230 16.052 1.575 1.00 0.00 C ATOM 283 NZ LYS 37 53.670 16.294 1.338 1.00 0.00 N ATOM 284 C LYS 37 47.565 14.657 3.011 1.00 0.00 C ATOM 285 O LYS 37 46.980 15.444 2.267 1.00 0.00 O ATOM 286 N GLU 38 47.377 14.651 4.343 1.00 0.00 N ATOM 287 CA GLU 38 46.462 15.599 4.891 1.00 0.00 C ATOM 288 CB GLU 38 46.112 15.356 6.369 1.00 0.00 C ATOM 289 CG GLU 38 45.275 14.096 6.592 1.00 0.00 C ATOM 290 CD GLU 38 46.198 12.892 6.492 1.00 0.00 C ATOM 291 OE1 GLU 38 46.819 12.541 7.530 1.00 0.00 O ATOM 292 OE2 GLU 38 46.298 12.310 5.378 1.00 0.00 O ATOM 293 C GLU 38 47.087 16.945 4.783 1.00 0.00 C ATOM 294 O GLU 38 48.215 17.167 5.218 1.00 0.00 O ATOM 295 N GLU 39 46.352 17.887 4.172 1.00 0.00 N ATOM 296 CA GLU 39 46.830 19.223 4.059 1.00 0.00 C ATOM 297 CB GLU 39 46.439 19.935 2.763 1.00 0.00 C ATOM 298 CG GLU 39 47.348 19.470 1.626 1.00 0.00 C ATOM 299 CD GLU 39 48.733 20.052 1.886 1.00 0.00 C ATOM 300 OE1 GLU 39 49.297 19.778 2.979 1.00 0.00 O ATOM 301 OE2 GLU 39 49.242 20.787 0.998 1.00 0.00 O ATOM 302 C GLU 39 46.367 19.978 5.250 1.00 0.00 C ATOM 303 O GLU 39 45.593 19.468 6.058 1.00 0.00 O ATOM 304 N ILE 40 46.866 21.217 5.408 1.00 0.00 N ATOM 305 CA ILE 40 46.529 21.941 6.592 1.00 0.00 C ATOM 306 CB ILE 40 47.719 22.541 7.290 1.00 0.00 C ATOM 307 CG2 ILE 40 48.328 23.621 6.379 1.00 0.00 C ATOM 308 CG1 ILE 40 47.320 23.047 8.687 1.00 0.00 C ATOM 309 CD1 ILE 40 48.513 23.389 9.577 1.00 0.00 C ATOM 310 C ILE 40 45.587 23.046 6.258 1.00 0.00 C ATOM 311 O ILE 40 45.802 23.829 5.333 1.00 0.00 O ATOM 312 N ARG 41 44.483 23.100 7.023 1.00 0.00 N ATOM 313 CA ARG 41 43.481 24.112 6.888 1.00 0.00 C ATOM 314 CB ARG 41 42.068 23.535 6.706 1.00 0.00 C ATOM 315 CG ARG 41 41.635 22.651 7.877 1.00 0.00 C ATOM 316 CD ARG 41 42.463 21.370 7.998 1.00 0.00 C ATOM 317 NE ARG 41 41.976 20.621 9.190 1.00 0.00 N ATOM 318 CZ ARG 41 42.838 19.823 9.887 1.00 0.00 C ATOM 319 NH1 ARG 41 44.141 19.724 9.497 1.00 0.00 N ATOM 320 NH2 ARG 41 42.395 19.125 10.974 1.00 0.00 N ATOM 321 C ARG 41 43.493 24.860 8.186 1.00 0.00 C ATOM 322 O ARG 41 44.031 24.366 9.176 1.00 0.00 O ATOM 323 N LYS 42 42.965 26.102 8.198 1.00 0.00 N ATOM 324 CA LYS 42 42.929 26.869 9.416 1.00 0.00 C ATOM 325 CB LYS 42 42.557 28.355 9.254 1.00 0.00 C ATOM 326 CG LYS 42 43.742 29.260 8.906 1.00 0.00 C ATOM 327 CD LYS 42 43.343 30.721 8.669 1.00 0.00 C ATOM 328 CE LYS 42 44.514 31.627 8.289 1.00 0.00 C ATOM 329 NZ LYS 42 44.858 31.429 6.864 1.00 0.00 N ATOM 330 C LYS 42 41.965 26.287 10.405 1.00 0.00 C ATOM 331 O LYS 42 42.252 26.254 11.599 1.00 0.00 O ATOM 332 N GLU 43 40.804 25.800 9.924 1.00 0.00 N ATOM 333 CA GLU 43 39.738 25.292 10.746 1.00 0.00 C ATOM 334 CB GLU 43 40.015 23.931 11.426 1.00 0.00 C ATOM 335 CG GLU 43 41.145 23.901 12.454 1.00 0.00 C ATOM 336 CD GLU 43 41.230 22.474 12.985 1.00 0.00 C ATOM 337 OE1 GLU 43 41.425 21.545 12.153 1.00 0.00 O ATOM 338 OE2 GLU 43 41.090 22.291 14.222 1.00 0.00 O ATOM 339 C GLU 43 39.322 26.317 11.750 1.00 0.00 C ATOM 340 O GLU 43 39.200 26.035 12.943 1.00 0.00 O ATOM 341 N TRP 44 39.089 27.558 11.277 1.00 0.00 N ATOM 342 CA TRP 44 38.617 28.582 12.158 1.00 0.00 C ATOM 343 CB TRP 44 39.053 30.012 11.794 1.00 0.00 C ATOM 344 CG TRP 44 38.407 31.052 12.680 1.00 0.00 C ATOM 345 CD2 TRP 44 38.730 31.242 14.064 1.00 0.00 C ATOM 346 CD1 TRP 44 37.401 31.929 12.395 1.00 0.00 C ATOM 347 NE1 TRP 44 37.085 32.662 13.515 1.00 0.00 N ATOM 348 CE2 TRP 44 37.892 32.244 14.552 1.00 0.00 C ATOM 349 CE3 TRP 44 39.644 30.622 14.870 1.00 0.00 C ATOM 350 CZ2 TRP 44 37.957 32.648 15.856 1.00 0.00 C ATOM 351 CZ3 TRP 44 39.712 31.036 16.182 1.00 0.00 C ATOM 352 CH2 TRP 44 38.885 32.028 16.666 1.00 0.00 C ATOM 353 C TRP 44 37.129 28.545 12.157 1.00 0.00 C ATOM 354 O TRP 44 36.492 28.255 11.144 1.00 0.00 O ATOM 355 N MET 45 36.532 28.834 13.326 1.00 0.00 N ATOM 356 CA MET 45 35.110 28.793 13.435 1.00 0.00 C ATOM 357 CB MET 45 34.630 28.121 14.733 1.00 0.00 C ATOM 358 CG MET 45 35.051 26.653 14.839 1.00 0.00 C ATOM 359 SD MET 45 34.583 25.830 16.393 1.00 0.00 S ATOM 360 CE MET 45 32.820 25.676 15.986 1.00 0.00 C ATOM 361 C MET 45 34.622 30.202 13.439 1.00 0.00 C ATOM 362 O MET 45 35.150 31.059 14.147 1.00 0.00 O ATOM 363 N PHE 46 33.590 30.471 12.620 1.00 0.00 N ATOM 364 CA PHE 46 33.013 31.778 12.532 1.00 0.00 C ATOM 365 CB PHE 46 32.728 32.222 11.080 1.00 0.00 C ATOM 366 CG PHE 46 32.345 33.666 11.070 1.00 0.00 C ATOM 367 CD1 PHE 46 33.296 34.643 11.257 1.00 0.00 C ATOM 368 CD2 PHE 46 31.040 34.048 10.854 1.00 0.00 C ATOM 369 CE1 PHE 46 32.952 35.974 11.243 1.00 0.00 C ATOM 370 CE2 PHE 46 30.690 35.379 10.838 1.00 0.00 C ATOM 371 CZ PHE 46 31.645 36.345 11.034 1.00 0.00 C ATOM 372 C PHE 46 31.718 31.666 13.255 1.00 0.00 C ATOM 373 O PHE 46 31.358 30.592 13.734 1.00 0.00 O ATOM 374 N LYS 47 30.986 32.783 13.383 1.00 0.00 N ATOM 375 CA LYS 47 29.771 32.721 14.128 1.00 0.00 C ATOM 376 CB LYS 47 29.069 34.083 14.254 1.00 0.00 C ATOM 377 CG LYS 47 27.891 34.074 15.231 1.00 0.00 C ATOM 378 CD LYS 47 27.512 35.465 15.745 1.00 0.00 C ATOM 379 CE LYS 47 28.502 36.002 16.784 1.00 0.00 C ATOM 380 NZ LYS 47 28.092 37.348 17.241 1.00 0.00 N ATOM 381 C LYS 47 28.849 31.738 13.470 1.00 0.00 C ATOM 382 O LYS 47 28.224 30.939 14.165 1.00 0.00 O ATOM 383 N LEU 48 28.726 31.744 12.126 1.00 0.00 N ATOM 384 CA LEU 48 27.821 30.774 11.575 1.00 0.00 C ATOM 385 CB LEU 48 26.469 31.386 11.171 1.00 0.00 C ATOM 386 CG LEU 48 25.688 32.050 12.318 1.00 0.00 C ATOM 387 CD1 LEU 48 24.353 32.627 11.808 1.00 0.00 C ATOM 388 CD2 LEU 48 25.511 31.095 13.509 1.00 0.00 C ATOM 389 C LEU 48 28.361 30.204 10.298 1.00 0.00 C ATOM 390 O LEU 48 27.655 30.221 9.294 1.00 0.00 O ATOM 391 N VAL 49 29.582 29.632 10.297 1.00 0.00 N ATOM 392 CA VAL 49 30.173 29.101 9.091 1.00 0.00 C ATOM 393 CB VAL 49 30.732 30.196 8.170 1.00 0.00 C ATOM 394 CG1 VAL 49 31.342 29.589 6.896 1.00 0.00 C ATOM 395 CG2 VAL 49 29.692 31.284 7.858 1.00 0.00 C ATOM 396 C VAL 49 31.408 28.396 9.592 1.00 0.00 C ATOM 397 O VAL 49 31.764 28.527 10.761 1.00 0.00 O ATOM 398 N GLY 50 32.081 27.609 8.730 1.00 0.00 N ATOM 399 CA GLY 50 33.356 27.039 9.054 1.00 0.00 C ATOM 400 C GLY 50 34.198 27.292 7.846 1.00 0.00 C ATOM 401 O GLY 50 33.864 26.846 6.750 1.00 0.00 O ATOM 402 N LYS 51 35.323 28.020 8.011 1.00 0.00 N ATOM 403 CA LYS 51 36.123 28.300 6.856 1.00 0.00 C ATOM 404 CB LYS 51 36.699 29.726 6.788 1.00 0.00 C ATOM 405 CG LYS 51 35.673 30.858 6.772 1.00 0.00 C ATOM 406 CD LYS 51 36.329 32.241 6.728 1.00 0.00 C ATOM 407 CE LYS 51 37.687 32.308 7.432 1.00 0.00 C ATOM 408 NZ LYS 51 37.525 32.143 8.892 1.00 0.00 N ATOM 409 C LYS 51 37.329 27.427 6.919 1.00 0.00 C ATOM 410 O LYS 51 38.129 27.517 7.847 1.00 0.00 O ATOM 411 N GLU 52 37.494 26.550 5.919 1.00 0.00 N ATOM 412 CA GLU 52 38.679 25.753 5.905 1.00 0.00 C ATOM 413 CB GLU 52 38.462 24.346 5.318 1.00 0.00 C ATOM 414 CG GLU 52 37.572 23.434 6.167 1.00 0.00 C ATOM 415 CD GLU 52 38.429 22.799 7.250 1.00 0.00 C ATOM 416 OE1 GLU 52 39.188 21.849 6.921 1.00 0.00 O ATOM 417 OE2 GLU 52 38.336 23.255 8.420 1.00 0.00 O ATOM 418 C GLU 52 39.607 26.462 4.978 1.00 0.00 C ATOM 419 O GLU 52 39.349 26.537 3.779 1.00 0.00 O ATOM 420 N THR 53 40.713 27.026 5.501 1.00 0.00 N ATOM 421 CA THR 53 41.589 27.685 4.581 1.00 0.00 C ATOM 422 CB THR 53 41.823 29.140 4.874 1.00 0.00 C ATOM 423 OG1 THR 53 42.610 29.724 3.845 1.00 0.00 O ATOM 424 CG2 THR 53 42.515 29.287 6.230 1.00 0.00 C ATOM 425 C THR 53 42.887 26.952 4.559 1.00 0.00 C ATOM 426 O THR 53 43.619 26.877 5.545 1.00 0.00 O ATOM 427 N PHE 54 43.180 26.366 3.388 1.00 0.00 N ATOM 428 CA PHE 54 44.373 25.617 3.165 1.00 0.00 C ATOM 429 CB PHE 54 44.104 24.108 3.108 1.00 0.00 C ATOM 430 CG PHE 54 42.791 24.003 2.423 1.00 0.00 C ATOM 431 CD1 PHE 54 42.634 24.392 1.117 1.00 0.00 C ATOM 432 CD2 PHE 54 41.711 23.504 3.113 1.00 0.00 C ATOM 433 CE1 PHE 54 41.407 24.291 0.517 1.00 0.00 C ATOM 434 CE2 PHE 54 40.480 23.401 2.515 1.00 0.00 C ATOM 435 CZ PHE 54 40.329 23.799 1.212 1.00 0.00 C ATOM 436 C PHE 54 45.017 26.115 1.910 1.00 0.00 C ATOM 437 O PHE 54 44.365 26.685 1.035 1.00 0.00 O ATOM 438 N TYR 55 46.344 25.918 1.805 1.00 0.00 N ATOM 439 CA TYR 55 47.085 26.478 0.710 1.00 0.00 C ATOM 440 CB TYR 55 48.333 27.214 1.242 1.00 0.00 C ATOM 441 CG TYR 55 48.978 28.060 0.201 1.00 0.00 C ATOM 442 CD1 TYR 55 48.310 29.134 -0.340 1.00 0.00 C ATOM 443 CD2 TYR 55 50.276 27.821 -0.188 1.00 0.00 C ATOM 444 CE1 TYR 55 48.908 29.930 -1.288 1.00 0.00 C ATOM 445 CE2 TYR 55 50.881 28.613 -1.132 1.00 0.00 C ATOM 446 CZ TYR 55 50.195 29.667 -1.688 1.00 0.00 C ATOM 447 OH TYR 55 50.816 30.481 -2.660 1.00 0.00 O ATOM 448 C TYR 55 47.488 25.354 -0.196 1.00 0.00 C ATOM 449 O TYR 55 48.014 24.336 0.258 1.00 0.00 O ATOM 450 N VAL 56 47.214 25.499 -1.514 1.00 0.00 N ATOM 451 CA VAL 56 47.522 24.468 -2.464 1.00 0.00 C ATOM 452 CB VAL 56 46.372 24.137 -3.366 1.00 0.00 C ATOM 453 CG1 VAL 56 46.812 23.035 -4.341 1.00 0.00 C ATOM 454 CG2 VAL 56 45.123 23.846 -2.537 1.00 0.00 C ATOM 455 C VAL 56 48.512 25.016 -3.443 1.00 0.00 C ATOM 456 O VAL 56 48.117 25.737 -4.360 1.00 0.00 O ATOM 457 N GLY 57 49.799 24.655 -3.295 1.00 0.00 N ATOM 458 CA GLY 57 50.801 25.049 -4.247 1.00 0.00 C ATOM 459 C GLY 57 50.717 26.526 -4.468 1.00 0.00 C ATOM 460 O GLY 57 50.657 27.314 -3.528 1.00 0.00 O ATOM 461 N ALA 58 50.732 26.927 -5.750 1.00 0.00 N ATOM 462 CA ALA 58 50.629 28.302 -6.145 1.00 0.00 C ATOM 463 CB ALA 58 50.847 28.502 -7.654 1.00 0.00 C ATOM 464 C ALA 58 49.267 28.844 -5.816 1.00 0.00 C ATOM 465 O ALA 58 49.138 29.990 -5.387 1.00 0.00 O ATOM 466 N ALA 59 48.213 28.025 -6.020 1.00 0.00 N ATOM 467 CA ALA 59 46.848 28.469 -5.896 1.00 0.00 C ATOM 468 CB ALA 59 45.843 27.568 -6.634 1.00 0.00 C ATOM 469 C ALA 59 46.395 28.566 -4.475 1.00 0.00 C ATOM 470 O ALA 59 46.959 27.953 -3.572 1.00 0.00 O ATOM 471 N LYS 60 45.348 29.393 -4.253 1.00 0.00 N ATOM 472 CA LYS 60 44.753 29.519 -2.956 1.00 0.00 C ATOM 473 CB LYS 60 44.562 30.977 -2.484 1.00 0.00 C ATOM 474 CG LYS 60 43.477 31.784 -3.208 1.00 0.00 C ATOM 475 CD LYS 60 42.046 31.451 -2.771 1.00 0.00 C ATOM 476 CE LYS 60 40.972 32.318 -3.435 1.00 0.00 C ATOM 477 NZ LYS 60 40.952 33.663 -2.816 1.00 0.00 N ATOM 478 C LYS 60 43.419 28.862 -3.069 1.00 0.00 C ATOM 479 O LYS 60 42.672 29.090 -4.018 1.00 0.00 O ATOM 480 N THR 61 43.087 27.995 -2.103 1.00 0.00 N ATOM 481 CA THR 61 41.854 27.286 -2.221 1.00 0.00 C ATOM 482 CB THR 61 42.091 25.917 -2.730 1.00 0.00 C ATOM 483 OG1 THR 61 42.797 25.153 -1.765 1.00 0.00 O ATOM 484 CG2 THR 61 42.940 26.062 -4.008 1.00 0.00 C ATOM 485 C THR 61 41.291 27.187 -0.845 1.00 0.00 C ATOM 486 O THR 61 41.940 27.577 0.124 1.00 0.00 O ATOM 487 N LYS 62 40.037 26.709 -0.728 1.00 0.00 N ATOM 488 CA LYS 62 39.476 26.549 0.579 1.00 0.00 C ATOM 489 CB LYS 62 39.266 27.882 1.318 1.00 0.00 C ATOM 490 CG LYS 62 38.278 28.820 0.625 1.00 0.00 C ATOM 491 CD LYS 62 37.839 29.998 1.496 1.00 0.00 C ATOM 492 CE LYS 62 38.960 31.004 1.772 1.00 0.00 C ATOM 493 NZ LYS 62 39.980 30.393 2.653 1.00 0.00 N ATOM 494 C LYS 62 38.144 25.883 0.451 1.00 0.00 C ATOM 495 O LYS 62 37.477 25.988 -0.577 1.00 0.00 O ATOM 496 N ALA 63 37.723 25.161 1.510 1.00 0.00 N ATOM 497 CA ALA 63 36.436 24.533 1.459 1.00 0.00 C ATOM 498 CB ALA 63 36.410 23.144 2.120 1.00 0.00 C ATOM 499 C ALA 63 35.496 25.414 2.221 1.00 0.00 C ATOM 500 O ALA 63 35.658 25.624 3.421 1.00 0.00 O ATOM 501 N THR 64 34.459 25.945 1.546 1.00 0.00 N ATOM 502 CA THR 64 33.578 26.821 2.256 1.00 0.00 C ATOM 503 CB THR 64 32.985 27.925 1.426 1.00 0.00 C ATOM 504 OG1 THR 64 32.206 27.395 0.368 1.00 0.00 O ATOM 505 CG2 THR 64 34.130 28.784 0.865 1.00 0.00 C ATOM 506 C THR 64 32.483 25.988 2.816 1.00 0.00 C ATOM 507 O THR 64 31.796 25.256 2.104 1.00 0.00 O ATOM 508 N ILE 65 32.297 26.084 4.141 1.00 0.00 N ATOM 509 CA ILE 65 31.332 25.227 4.744 1.00 0.00 C ATOM 510 CB ILE 65 31.926 24.385 5.828 1.00 0.00 C ATOM 511 CG2 ILE 65 30.865 23.379 6.310 1.00 0.00 C ATOM 512 CG1 ILE 65 33.215 23.741 5.289 1.00 0.00 C ATOM 513 CD1 ILE 65 33.063 23.137 3.895 1.00 0.00 C ATOM 514 C ILE 65 30.278 26.094 5.344 1.00 0.00 C ATOM 515 O ILE 65 30.570 27.171 5.857 1.00 0.00 O ATOM 516 N ASN 66 29.006 25.668 5.242 1.00 0.00 N ATOM 517 CA ASN 66 27.944 26.436 5.819 1.00 0.00 C ATOM 518 CB ASN 66 26.981 27.035 4.778 1.00 0.00 C ATOM 519 CG ASN 66 26.321 25.891 4.023 1.00 0.00 C ATOM 520 OD1 ASN 66 26.982 24.936 3.616 1.00 0.00 O ATOM 521 ND2 ASN 66 24.978 25.982 3.832 1.00 0.00 N ATOM 522 C ASN 66 27.153 25.514 6.684 1.00 0.00 C ATOM 523 O ASN 66 26.964 24.344 6.356 1.00 0.00 O ATOM 524 N ILE 67 26.664 26.017 7.832 1.00 0.00 N ATOM 525 CA ILE 67 25.919 25.147 8.689 1.00 0.00 C ATOM 526 CB ILE 67 26.487 25.040 10.081 1.00 0.00 C ATOM 527 CG2 ILE 67 26.250 26.372 10.810 1.00 0.00 C ATOM 528 CG1 ILE 67 25.936 23.803 10.819 1.00 0.00 C ATOM 529 CD1 ILE 67 24.428 23.810 11.057 1.00 0.00 C ATOM 530 C ILE 67 24.516 25.666 8.767 1.00 0.00 C ATOM 531 O ILE 67 24.294 26.860 8.953 1.00 0.00 O ATOM 532 N ASP 68 23.526 24.769 8.564 1.00 0.00 N ATOM 533 CA ASP 68 22.151 25.158 8.664 1.00 0.00 C ATOM 534 CB ASP 68 21.358 25.000 7.356 1.00 0.00 C ATOM 535 CG ASP 68 21.343 23.530 6.976 1.00 0.00 C ATOM 536 OD1 ASP 68 22.444 22.970 6.741 1.00 0.00 O ATOM 537 OD2 ASP 68 20.231 22.941 6.919 1.00 0.00 O ATOM 538 C ASP 68 21.499 24.282 9.685 1.00 0.00 C ATOM 539 O ASP 68 21.676 23.065 9.661 1.00 0.00 O ATOM 540 N ALA 69 20.764 24.900 10.636 1.00 0.00 N ATOM 541 CA ALA 69 20.065 24.193 11.673 1.00 0.00 C ATOM 542 CB ALA 69 20.779 22.944 12.227 1.00 0.00 C ATOM 543 C ALA 69 19.976 25.119 12.835 1.00 0.00 C ATOM 544 O ALA 69 20.361 26.285 12.759 1.00 0.00 O ATOM 545 N ILE 70 19.435 24.606 13.952 1.00 0.00 N ATOM 546 CA ILE 70 19.388 25.380 15.150 1.00 0.00 C ATOM 547 CB ILE 70 18.761 24.638 16.292 1.00 0.00 C ATOM 548 CG2 ILE 70 18.927 25.497 17.556 1.00 0.00 C ATOM 549 CG1 ILE 70 17.301 24.279 15.976 1.00 0.00 C ATOM 550 CD1 ILE 70 16.400 25.496 15.778 1.00 0.00 C ATOM 551 C ILE 70 20.813 25.618 15.527 1.00 0.00 C ATOM 552 O ILE 70 21.203 26.725 15.895 1.00 0.00 O ATOM 553 N SER 71 21.629 24.557 15.413 1.00 0.00 N ATOM 554 CA SER 71 23.019 24.595 15.755 1.00 0.00 C ATOM 555 CB SER 71 23.374 23.706 16.960 1.00 0.00 C ATOM 556 OG SER 71 22.737 24.190 18.134 1.00 0.00 O ATOM 557 C SER 71 23.732 24.047 14.570 1.00 0.00 C ATOM 558 O SER 71 23.953 24.754 13.587 1.00 0.00 O ATOM 559 N GLY 72 24.154 22.772 14.649 1.00 0.00 N ATOM 560 CA GLY 72 24.794 22.203 13.504 1.00 0.00 C ATOM 561 C GLY 72 24.087 20.933 13.166 1.00 0.00 C ATOM 562 O GLY 72 24.685 19.859 13.188 1.00 0.00 O ATOM 563 N PHE 73 22.780 21.021 12.846 1.00 0.00 N ATOM 564 CA PHE 73 22.085 19.824 12.484 1.00 0.00 C ATOM 565 CB PHE 73 20.571 20.005 12.298 1.00 0.00 C ATOM 566 CG PHE 73 20.049 18.673 11.889 1.00 0.00 C ATOM 567 CD1 PHE 73 19.769 17.707 12.829 1.00 0.00 C ATOM 568 CD2 PHE 73 19.843 18.385 10.560 1.00 0.00 C ATOM 569 CE1 PHE 73 19.290 16.476 12.448 1.00 0.00 C ATOM 570 CE2 PHE 73 19.364 17.156 10.173 1.00 0.00 C ATOM 571 CZ PHE 73 19.086 16.198 11.118 1.00 0.00 C ATOM 572 C PHE 73 22.631 19.335 11.184 1.00 0.00 C ATOM 573 O PHE 73 23.023 18.175 11.062 1.00 0.00 O ATOM 574 N ALA 74 22.696 20.226 10.176 1.00 0.00 N ATOM 575 CA ALA 74 23.184 19.799 8.901 1.00 0.00 C ATOM 576 CB ALA 74 22.082 19.663 7.837 1.00 0.00 C ATOM 577 C ALA 74 24.137 20.832 8.412 1.00 0.00 C ATOM 578 O ALA 74 23.916 22.030 8.571 1.00 0.00 O ATOM 579 N TYR 75 25.254 20.380 7.820 1.00 0.00 N ATOM 580 CA TYR 75 26.225 21.293 7.301 1.00 0.00 C ATOM 581 CB TYR 75 27.471 21.424 8.195 1.00 0.00 C ATOM 582 CG TYR 75 27.767 20.073 8.745 1.00 0.00 C ATOM 583 CD1 TYR 75 28.205 19.045 7.946 1.00 0.00 C ATOM 584 CD2 TYR 75 27.609 19.846 10.094 1.00 0.00 C ATOM 585 CE1 TYR 75 28.472 17.806 8.485 1.00 0.00 C ATOM 586 CE2 TYR 75 27.875 18.613 10.639 1.00 0.00 C ATOM 587 CZ TYR 75 28.306 17.589 9.832 1.00 0.00 C ATOM 588 OH TYR 75 28.579 16.322 10.389 1.00 0.00 O ATOM 589 C TYR 75 26.618 20.863 5.927 1.00 0.00 C ATOM 590 O TYR 75 26.661 19.672 5.619 1.00 0.00 O ATOM 591 N GLU 76 26.889 21.854 5.054 1.00 0.00 N ATOM 592 CA GLU 76 27.260 21.602 3.693 1.00 0.00 C ATOM 593 CB GLU 76 26.379 22.366 2.692 1.00 0.00 C ATOM 594 CG GLU 76 26.726 22.136 1.220 1.00 0.00 C ATOM 595 CD GLU 76 25.755 22.967 0.390 1.00 0.00 C ATOM 596 OE1 GLU 76 24.532 22.924 0.697 1.00 0.00 O ATOM 597 OE2 GLU 76 26.220 23.664 -0.551 1.00 0.00 O ATOM 598 C GLU 76 28.660 22.099 3.516 1.00 0.00 C ATOM 599 O GLU 76 29.029 23.145 4.048 1.00 0.00 O ATOM 600 N TYR 77 29.485 21.346 2.762 1.00 0.00 N ATOM 601 CA TYR 77 30.845 21.737 2.542 1.00 0.00 C ATOM 602 CB TYR 77 31.852 20.631 2.920 1.00 0.00 C ATOM 603 CG TYR 77 31.629 20.223 4.339 1.00 0.00 C ATOM 604 CD1 TYR 77 30.595 19.374 4.654 1.00 0.00 C ATOM 605 CD2 TYR 77 32.448 20.664 5.354 1.00 0.00 C ATOM 606 CE1 TYR 77 30.377 18.985 5.954 1.00 0.00 C ATOM 607 CE2 TYR 77 32.237 20.281 6.657 1.00 0.00 C ATOM 608 CZ TYR 77 31.196 19.440 6.959 1.00 0.00 C ATOM 609 OH TYR 77 30.971 19.040 8.294 1.00 0.00 O ATOM 610 C TYR 77 30.980 21.912 1.065 1.00 0.00 C ATOM 611 O TYR 77 30.624 21.018 0.298 1.00 0.00 O ATOM 612 N THR 78 31.471 23.082 0.613 1.00 0.00 N ATOM 613 CA THR 78 31.642 23.244 -0.801 1.00 0.00 C ATOM 614 CB THR 78 30.703 24.237 -1.420 1.00 0.00 C ATOM 615 OG1 THR 78 30.836 25.500 -0.794 1.00 0.00 O ATOM 616 CG2 THR 78 29.264 23.718 -1.270 1.00 0.00 C ATOM 617 C THR 78 33.053 23.656 -1.068 1.00 0.00 C ATOM 618 O THR 78 33.551 24.647 -0.540 1.00 0.00 O ATOM 619 N LEU 79 33.721 22.877 -1.932 1.00 0.00 N ATOM 620 CA LEU 79 35.099 23.037 -2.288 1.00 0.00 C ATOM 621 CB LEU 79 35.534 21.836 -3.140 1.00 0.00 C ATOM 622 CG LEU 79 37.043 21.660 -3.294 1.00 0.00 C ATOM 623 CD1 LEU 79 37.707 22.890 -3.917 1.00 0.00 C ATOM 624 CD2 LEU 79 37.640 21.207 -1.962 1.00 0.00 C ATOM 625 C LEU 79 35.188 24.264 -3.149 1.00 0.00 C ATOM 626 O LEU 79 34.327 24.486 -3.999 1.00 0.00 O ATOM 627 N GLU 80 36.235 25.096 -2.949 1.00 0.00 N ATOM 628 CA GLU 80 36.368 26.305 -3.717 1.00 0.00 C ATOM 629 CB GLU 80 36.166 27.567 -2.859 1.00 0.00 C ATOM 630 CG GLU 80 34.779 27.705 -2.224 1.00 0.00 C ATOM 631 CD GLU 80 33.925 28.590 -3.118 1.00 0.00 C ATOM 632 OE1 GLU 80 33.375 28.066 -4.124 1.00 0.00 O ATOM 633 OE2 GLU 80 33.813 29.805 -2.804 1.00 0.00 O ATOM 634 C GLU 80 37.778 26.388 -4.212 1.00 0.00 C ATOM 635 O GLU 80 38.723 26.224 -3.442 1.00 0.00 O ATOM 636 N ILE 81 37.957 26.644 -5.523 1.00 0.00 N ATOM 637 CA ILE 81 39.278 26.784 -6.060 1.00 0.00 C ATOM 638 CB ILE 81 39.602 25.713 -7.055 1.00 0.00 C ATOM 639 CG2 ILE 81 41.011 25.985 -7.606 1.00 0.00 C ATOM 640 CG1 ILE 81 39.438 24.322 -6.422 1.00 0.00 C ATOM 641 CD1 ILE 81 39.337 23.202 -7.456 1.00 0.00 C ATOM 642 C ILE 81 39.290 28.069 -6.829 1.00 0.00 C ATOM 643 O ILE 81 38.545 28.225 -7.794 1.00 0.00 O ATOM 644 N ASN 82 40.152 29.024 -6.438 1.00 0.00 N ATOM 645 CA ASN 82 40.258 30.264 -7.155 1.00 0.00 C ATOM 646 CB ASN 82 40.806 30.096 -8.581 1.00 0.00 C ATOM 647 CG ASN 82 42.301 29.837 -8.479 1.00 0.00 C ATOM 648 OD1 ASN 82 43.077 30.737 -8.156 1.00 0.00 O ATOM 649 ND2 ASN 82 42.724 28.575 -8.755 1.00 0.00 N ATOM 650 C ASN 82 38.928 30.945 -7.247 1.00 0.00 C ATOM 651 O ASN 82 38.603 31.539 -8.273 1.00 0.00 O ATOM 652 N GLY 83 38.120 30.884 -6.173 1.00 0.00 N ATOM 653 CA GLY 83 36.886 31.616 -6.158 1.00 0.00 C ATOM 654 C GLY 83 35.857 30.938 -7.005 1.00 0.00 C ATOM 655 O GLY 83 34.864 31.560 -7.378 1.00 0.00 O ATOM 656 N LYS 84 36.052 29.651 -7.349 1.00 0.00 N ATOM 657 CA LYS 84 35.035 29.017 -8.135 1.00 0.00 C ATOM 658 CB LYS 84 35.511 28.484 -9.498 1.00 0.00 C ATOM 659 CG LYS 84 36.512 27.333 -9.401 1.00 0.00 C ATOM 660 CD LYS 84 36.679 26.558 -10.709 1.00 0.00 C ATOM 661 CE LYS 84 37.203 27.407 -11.869 1.00 0.00 C ATOM 662 NZ LYS 84 37.321 26.578 -13.089 1.00 0.00 N ATOM 663 C LYS 84 34.516 27.854 -7.356 1.00 0.00 C ATOM 664 O LYS 84 35.254 27.220 -6.604 1.00 0.00 O ATOM 665 N SER 85 33.210 27.562 -7.512 1.00 0.00 N ATOM 666 CA SER 85 32.617 26.467 -6.806 1.00 0.00 C ATOM 667 CB SER 85 31.079 26.455 -6.860 1.00 0.00 C ATOM 668 OG SER 85 30.576 25.342 -6.136 1.00 0.00 O ATOM 669 C SER 85 33.093 25.202 -7.436 1.00 0.00 C ATOM 670 O SER 85 33.392 25.163 -8.629 1.00 0.00 O ATOM 671 N LEU 86 33.185 24.128 -6.629 1.00 0.00 N ATOM 672 CA LEU 86 33.645 22.873 -7.140 1.00 0.00 C ATOM 673 CB LEU 86 34.860 22.343 -6.349 1.00 0.00 C ATOM 674 CG LEU 86 35.646 21.186 -7.001 1.00 0.00 C ATOM 675 CD1 LEU 86 36.738 20.666 -6.054 1.00 0.00 C ATOM 676 CD2 LEU 86 34.737 20.069 -7.522 1.00 0.00 C ATOM 677 C LEU 86 32.500 21.922 -6.962 1.00 0.00 C ATOM 678 O LEU 86 31.881 21.876 -5.899 1.00 0.00 O ATOM 679 N LYS 87 32.175 21.145 -8.014 1.00 0.00 N ATOM 680 CA LYS 87 31.064 20.242 -7.939 1.00 0.00 C ATOM 681 CB LYS 87 30.661 19.660 -9.305 1.00 0.00 C ATOM 682 CG LYS 87 31.807 18.967 -10.042 1.00 0.00 C ATOM 683 CD LYS 87 31.343 18.145 -11.245 1.00 0.00 C ATOM 684 CE LYS 87 32.486 17.708 -12.162 1.00 0.00 C ATOM 685 NZ LYS 87 33.070 18.892 -12.833 1.00 0.00 N ATOM 686 C LYS 87 31.400 19.114 -7.017 1.00 0.00 C ATOM 687 O LYS 87 32.500 18.564 -7.041 1.00 0.00 O ATOM 688 N LYS 88 30.425 18.746 -6.165 1.00 0.00 N ATOM 689 CA LYS 88 30.624 17.711 -5.196 1.00 0.00 C ATOM 690 CB LYS 88 29.756 17.918 -3.934 1.00 0.00 C ATOM 691 CG LYS 88 30.340 17.400 -2.609 1.00 0.00 C ATOM 692 CD LYS 88 30.552 15.890 -2.494 1.00 0.00 C ATOM 693 CE LYS 88 29.260 15.105 -2.265 1.00 0.00 C ATOM 694 NZ LYS 88 28.719 15.406 -0.924 1.00 0.00 N ATOM 695 C LYS 88 30.223 16.429 -5.855 1.00 0.00 C ATOM 696 O LYS 88 29.583 16.424 -6.905 1.00 0.00 O ATOM 697 N TYR 89 30.611 15.300 -5.241 1.00 0.00 N ATOM 698 CA TYR 89 30.312 13.990 -5.730 1.00 0.00 C ATOM 699 CB TYR 89 30.850 12.916 -4.767 1.00 0.00 C ATOM 700 CG TYR 89 30.345 11.573 -5.162 1.00 0.00 C ATOM 701 CD1 TYR 89 29.118 11.143 -4.716 1.00 0.00 C ATOM 702 CD2 TYR 89 31.095 10.743 -5.964 1.00 0.00 C ATOM 703 CE1 TYR 89 28.636 9.904 -5.063 1.00 0.00 C ATOM 704 CE2 TYR 89 30.617 9.502 -6.316 1.00 0.00 C ATOM 705 CZ TYR 89 29.388 9.082 -5.865 1.00 0.00 C ATOM 706 OH TYR 89 28.896 7.809 -6.223 1.00 0.00 O ATOM 707 C TYR 89 28.824 13.872 -5.798 1.00 0.00 C ATOM 708 O TYR 89 28.277 13.365 -6.775 1.00 0.00 O ATOM 709 N MET 90 28.128 14.362 -4.758 1.00 0.00 N ATOM 710 CA MET 90 26.699 14.289 -4.758 1.00 0.00 C ATOM 711 CB MET 90 26.036 15.057 -5.915 1.00 0.00 C ATOM 712 CG MET 90 26.259 16.569 -5.887 1.00 0.00 C ATOM 713 SD MET 90 25.471 17.462 -7.261 1.00 0.00 S ATOM 714 CE MET 90 26.522 16.733 -8.549 1.00 0.00 C ATOM 715 C MET 90 26.310 12.827 -4.914 1.00 0.00 C ATOM 716 O MET 90 26.625 12.029 -3.995 1.00 0.00 O ATOM 717 OXT MET 90 25.688 12.488 -5.958 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 67.99 57.9 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 52.85 68.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 72.04 55.6 108 100.0 108 ARMSMC BURIED . . . . . . . . 61.23 61.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.20 34.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 96.32 33.3 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 97.87 32.7 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 102.56 25.0 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 86.37 48.4 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.52 52.7 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 70.12 58.7 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 75.50 51.3 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 75.22 48.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 73.46 59.1 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.51 20.8 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 82.51 20.8 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 81.84 23.5 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 90.40 16.7 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 52.14 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 95.62 23.1 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 95.62 23.1 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 90.68 20.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 88.95 27.3 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 126.13 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.68 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.68 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0632 CRMSCA SECONDARY STRUCTURE . . 4.05 59 100.0 59 CRMSCA SURFACE . . . . . . . . 6.04 55 100.0 55 CRMSCA BURIED . . . . . . . . 5.07 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.73 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 4.15 293 100.0 293 CRMSMC SURFACE . . . . . . . . 6.09 269 100.0 269 CRMSMC BURIED . . . . . . . . 5.13 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.50 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 7.61 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.68 252 100.0 252 CRMSSC SURFACE . . . . . . . . 8.33 204 100.0 204 CRMSSC BURIED . . . . . . . . 6.21 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.61 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.96 488 100.0 488 CRMSALL SURFACE . . . . . . . . 7.15 424 100.0 424 CRMSALL BURIED . . . . . . . . 5.72 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.615 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 3.256 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 5.089 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 3.868 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.642 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 3.327 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 5.090 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 3.945 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.062 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 6.129 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.498 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 7.071 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 4.707 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.302 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.902 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.961 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 4.344 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 26 42 53 82 90 90 DISTCA CA (P) 4.44 28.89 46.67 58.89 91.11 90 DISTCA CA (RMS) 0.71 1.42 1.88 2.45 4.73 DISTCA ALL (N) 31 170 283 392 611 716 716 DISTALL ALL (P) 4.33 23.74 39.53 54.75 85.34 716 DISTALL ALL (RMS) 0.71 1.42 1.93 2.62 4.74 DISTALL END of the results output