####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS403_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS403_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 46 41 - 86 5.00 7.96 LCS_AVERAGE: 40.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 4 - 24 1.71 7.60 LCS_AVERAGE: 15.10 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 73 - 85 0.68 7.15 LCS_AVERAGE: 8.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 27 4 4 9 15 21 25 29 33 39 42 54 55 59 61 66 67 71 74 77 79 LCS_GDT T 2 T 2 4 5 27 4 4 4 5 6 6 9 13 14 40 46 55 58 61 66 67 71 74 77 79 LCS_GDT D 3 D 3 4 7 27 4 4 4 15 21 25 29 38 43 49 54 57 63 65 66 70 71 75 77 79 LCS_GDT L 4 L 4 4 21 27 4 4 4 7 22 33 39 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT V 5 V 5 8 21 27 3 10 24 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 6 A 6 8 21 27 9 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT V 7 V 7 8 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT W 8 W 8 8 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT D 9 D 9 8 21 27 13 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT V 10 V 10 8 21 27 9 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 11 A 11 8 21 27 8 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT L 12 L 12 8 21 27 5 10 20 25 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT S 13 S 13 6 21 27 3 5 9 15 22 31 35 39 51 54 58 62 65 70 72 73 74 76 77 79 LCS_GDT D 14 D 14 10 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT G 15 G 15 10 21 27 8 15 29 31 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT V 16 V 16 10 21 27 8 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT H 17 H 17 10 21 27 11 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 18 K 18 10 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 19 I 19 10 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 20 E 20 10 21 27 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT F 21 F 21 10 21 27 9 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 22 E 22 10 21 27 6 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT H 23 H 23 10 21 27 8 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT G 24 G 24 8 21 27 3 5 21 32 34 35 38 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT T 25 T 25 3 5 27 3 3 3 4 5 6 11 18 37 41 42 43 52 63 67 71 74 76 77 79 LCS_GDT T 26 T 26 3 8 27 3 3 4 7 8 10 10 10 13 17 20 26 36 45 51 57 70 75 77 79 LCS_GDT S 27 S 27 7 8 27 3 3 7 7 8 10 10 10 12 14 20 21 28 36 43 50 54 63 76 78 LCS_GDT G 28 G 28 7 8 25 3 6 7 7 8 10 10 10 10 14 18 21 28 29 36 42 51 57 62 69 LCS_GDT K 29 K 29 7 8 16 4 6 7 7 8 10 10 10 10 15 21 23 28 32 41 50 54 58 68 75 LCS_GDT R 30 R 30 7 8 16 4 6 7 7 8 10 10 10 10 11 18 23 28 32 41 50 54 58 63 69 LCS_GDT V 31 V 31 7 8 16 4 6 7 7 8 10 10 10 14 15 18 23 31 37 50 52 59 60 69 75 LCS_GDT V 32 V 32 7 8 16 4 6 7 7 8 10 10 10 10 11 12 16 21 30 41 50 54 58 62 69 LCS_GDT Y 33 Y 33 7 8 16 4 6 7 7 8 10 10 10 10 11 12 15 19 30 41 50 54 58 63 70 LCS_GDT V 34 V 34 3 4 17 3 3 3 4 4 7 9 10 11 11 17 22 26 34 44 50 54 63 69 72 LCS_GDT D 35 D 35 3 6 19 3 3 4 6 9 10 14 16 22 25 29 39 47 57 65 70 74 76 77 79 LCS_GDT G 36 G 36 3 6 19 3 3 4 7 11 27 37 43 49 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 37 K 37 4 7 19 3 4 4 12 19 34 36 40 47 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 38 E 38 4 7 19 3 4 4 9 19 33 36 39 44 55 58 62 65 70 72 73 74 76 77 79 LCS_GDT E 39 E 39 5 8 19 3 5 21 32 34 35 39 42 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 40 I 40 5 8 19 3 5 24 32 34 35 38 43 50 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT R 41 R 41 5 8 46 3 5 6 13 20 31 36 38 43 47 57 62 65 70 72 73 74 76 77 79 LCS_GDT K 42 K 42 5 8 46 3 5 6 7 15 19 30 37 39 44 53 59 65 70 72 73 74 76 77 79 LCS_GDT E 43 E 43 5 8 46 3 5 5 7 8 9 22 24 26 31 35 42 55 64 72 73 74 76 77 78 LCS_GDT W 44 W 44 5 8 46 3 5 5 7 10 16 22 24 26 32 42 49 61 70 72 73 74 76 77 79 LCS_GDT M 45 M 45 5 8 46 3 5 6 7 10 16 22 24 30 38 45 53 64 70 72 73 74 76 77 79 LCS_GDT F 46 F 46 5 8 46 3 5 6 7 10 16 22 24 32 40 45 53 64 70 72 73 74 76 77 79 LCS_GDT K 47 K 47 5 6 46 3 5 5 5 9 16 22 25 30 40 47 59 64 70 72 73 74 76 77 79 LCS_GDT L 48 L 48 6 9 46 3 4 7 7 8 9 14 18 22 26 35 48 61 69 72 73 74 76 77 78 LCS_GDT V 49 V 49 6 9 46 5 6 6 7 10 23 27 39 49 54 58 62 65 70 72 73 74 76 77 79 LCS_GDT G 50 G 50 6 9 46 5 6 17 25 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 51 K 51 6 13 46 5 6 7 25 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 52 E 52 6 13 46 5 6 7 21 30 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT T 53 T 53 6 13 46 5 10 16 25 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT F 54 F 54 6 13 46 5 6 13 23 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT Y 55 Y 55 6 13 46 3 5 15 23 32 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT V 56 V 56 7 13 46 3 5 11 14 23 32 36 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT G 57 G 57 7 13 46 4 6 9 14 23 32 36 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 58 A 58 7 13 46 4 6 9 10 12 17 30 41 50 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 59 A 59 7 13 46 4 6 9 15 19 24 36 45 50 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 60 K 60 7 13 46 4 6 9 10 19 24 28 41 50 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT T 61 T 61 9 13 46 4 6 9 15 19 24 36 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 62 K 62 9 13 46 4 6 9 10 14 25 29 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 63 A 63 9 13 46 4 7 9 10 19 24 29 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT T 64 T 64 9 13 46 4 7 9 15 19 28 36 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 65 I 65 9 13 46 4 7 9 10 14 24 30 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT N 66 N 66 9 13 46 4 7 9 10 14 24 36 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 67 I 67 9 13 46 4 7 9 10 14 17 35 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT D 68 D 68 9 13 46 4 7 9 10 14 17 30 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 69 A 69 9 13 46 4 7 9 10 14 16 30 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 70 I 70 4 12 46 3 3 6 8 11 12 13 18 29 45 52 59 62 66 72 73 74 76 77 79 LCS_GDT S 71 S 71 4 13 46 3 3 4 5 10 17 19 21 28 39 41 50 60 66 70 73 74 76 77 79 LCS_GDT G 72 G 72 4 15 46 3 3 5 8 18 21 26 37 37 41 42 48 63 70 72 73 74 76 77 79 LCS_GDT F 73 F 73 13 16 46 14 24 29 32 34 36 39 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT A 74 A 74 13 16 46 14 24 29 32 34 36 39 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT Y 75 Y 75 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 76 E 76 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT Y 77 Y 77 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT T 78 T 78 13 16 46 8 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT L 79 L 79 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT E 80 E 80 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT I 81 I 81 13 16 46 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT N 82 N 82 13 16 46 5 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT G 83 G 83 13 16 46 4 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 84 K 84 13 16 46 13 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT S 85 S 85 13 16 46 5 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT L 86 L 86 11 16 46 3 6 15 28 34 36 39 44 51 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT K 87 K 87 5 16 45 3 5 11 14 18 24 36 40 46 53 58 62 65 70 72 73 74 76 77 79 LCS_GDT K 88 K 88 5 16 45 3 6 11 14 20 32 36 43 48 55 59 62 65 70 72 73 74 76 77 79 LCS_GDT Y 89 Y 89 5 13 44 3 4 6 7 11 17 22 28 34 43 47 51 59 63 66 69 73 75 76 79 LCS_GDT M 90 M 90 3 13 44 0 3 3 13 17 24 31 38 43 47 56 60 63 65 66 70 74 75 77 79 LCS_AVERAGE LCS_A: 21.26 ( 8.46 15.10 40.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 24 29 32 34 36 39 45 51 55 59 62 65 70 72 73 74 76 77 79 GDT PERCENT_AT 15.56 26.67 32.22 35.56 37.78 40.00 43.33 50.00 56.67 61.11 65.56 68.89 72.22 77.78 80.00 81.11 82.22 84.44 85.56 87.78 GDT RMS_LOCAL 0.32 0.61 0.76 1.04 1.16 1.65 1.84 2.61 2.76 2.97 3.21 3.41 3.68 4.35 4.55 4.65 4.76 4.94 5.02 5.31 GDT RMS_ALL_AT 6.89 6.98 7.00 6.96 6.97 7.10 7.10 7.42 7.36 7.30 7.28 7.24 7.13 7.04 7.08 7.08 7.10 7.06 7.02 6.87 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 9.901 0 0.516 1.369 13.309 4.167 2.083 LGA T 2 T 2 10.310 0 0.049 0.353 14.335 0.714 0.408 LGA D 3 D 3 8.334 0 0.290 0.905 10.714 11.190 6.071 LGA L 4 L 4 4.058 0 0.595 0.716 9.132 46.548 29.226 LGA V 5 V 5 1.979 0 0.602 1.392 6.175 71.071 50.612 LGA A 6 A 6 0.245 0 0.067 0.080 0.746 95.238 96.190 LGA V 7 V 7 0.801 0 0.065 0.900 3.049 90.476 82.177 LGA W 8 W 8 0.641 0 0.057 0.204 1.496 88.214 87.925 LGA D 9 D 9 0.887 0 0.036 0.307 1.943 90.476 86.012 LGA V 10 V 10 0.821 0 0.125 1.139 3.019 90.476 81.020 LGA A 11 A 11 1.255 0 0.174 0.168 2.297 75.119 76.381 LGA L 12 L 12 3.038 0 0.073 1.402 4.489 47.262 53.690 LGA S 13 S 13 5.635 0 0.365 0.790 7.709 26.429 20.000 LGA D 14 D 14 3.322 0 0.100 1.285 6.749 48.333 34.583 LGA G 15 G 15 2.767 0 0.056 0.056 2.825 57.143 57.143 LGA V 16 V 16 2.457 0 0.263 1.174 3.530 55.595 55.306 LGA H 17 H 17 1.703 0 0.135 0.999 4.292 79.405 64.286 LGA K 18 K 18 1.386 0 0.025 0.735 3.746 79.286 69.048 LGA I 19 I 19 1.344 0 0.131 0.265 1.609 83.690 79.345 LGA E 20 E 20 1.195 0 0.076 0.562 2.249 79.286 76.720 LGA F 21 F 21 1.202 0 0.164 0.575 2.527 83.690 77.749 LGA E 22 E 22 1.923 0 0.079 0.171 3.309 72.857 65.026 LGA H 23 H 23 1.911 0 0.600 1.281 4.719 56.786 55.000 LGA G 24 G 24 4.428 0 0.592 0.592 6.720 29.405 29.405 LGA T 25 T 25 11.223 0 0.023 0.926 14.595 0.357 0.204 LGA T 26 T 26 13.620 0 0.540 0.572 16.368 0.000 0.000 LGA S 27 S 27 14.765 0 0.661 0.799 15.172 0.000 0.000 LGA G 28 G 28 16.259 0 0.506 0.506 16.259 0.000 0.000 LGA K 29 K 29 15.782 0 0.034 1.068 16.029 0.000 0.000 LGA R 30 R 30 16.320 0 0.087 0.173 19.014 0.000 0.000 LGA V 31 V 31 15.345 0 0.040 0.164 15.626 0.000 0.000 LGA V 32 V 32 16.402 0 0.035 0.096 17.119 0.000 0.000 LGA Y 33 Y 33 15.950 0 0.436 1.456 24.026 0.000 0.000 LGA V 34 V 34 13.726 0 0.633 0.605 18.518 0.000 0.000 LGA D 35 D 35 9.061 0 0.463 0.467 13.516 11.548 5.833 LGA G 36 G 36 4.666 0 0.556 0.556 6.589 23.095 23.095 LGA K 37 K 37 6.096 0 0.567 0.857 12.143 17.619 10.582 LGA E 38 E 38 6.798 0 0.078 1.083 12.811 20.714 9.524 LGA E 39 E 39 4.718 0 0.636 1.056 7.602 27.619 19.947 LGA I 40 I 40 5.148 0 0.057 1.037 5.628 28.929 28.988 LGA R 41 R 41 7.870 0 0.248 1.019 12.767 6.190 2.381 LGA K 42 K 42 9.117 0 0.157 0.901 10.786 1.548 13.175 LGA E 43 E 43 13.272 0 0.120 0.526 19.831 0.000 0.000 LGA W 44 W 44 11.569 0 0.437 1.522 17.298 0.119 0.034 LGA M 45 M 45 11.864 0 0.065 0.977 12.750 0.000 0.000 LGA F 46 F 46 11.812 0 0.616 0.749 13.883 0.000 0.000 LGA K 47 K 47 11.144 0 0.114 1.144 11.144 0.119 0.053 LGA L 48 L 48 12.012 0 0.046 0.982 18.002 0.119 0.060 LGA V 49 V 49 6.999 0 0.166 1.116 9.083 14.524 14.014 LGA G 50 G 50 1.861 0 0.113 0.113 4.407 54.524 54.524 LGA K 51 K 51 2.117 0 0.039 0.834 11.874 69.048 39.101 LGA E 52 E 52 2.726 0 0.064 0.779 10.435 57.619 29.418 LGA T 53 T 53 1.907 0 0.054 0.847 6.910 71.429 50.952 LGA F 54 F 54 1.758 0 0.155 1.330 9.911 67.143 32.294 LGA Y 55 Y 55 1.999 0 0.145 0.397 11.312 67.143 29.603 LGA V 56 V 56 3.632 0 0.054 1.048 7.595 55.595 38.299 LGA G 57 G 57 4.082 0 0.033 0.033 4.494 38.690 38.690 LGA A 58 A 58 5.521 0 0.112 0.114 6.202 24.048 23.524 LGA A 59 A 59 4.622 0 0.655 0.608 4.622 38.929 38.571 LGA K 60 K 60 5.214 0 0.303 0.812 9.747 27.738 16.720 LGA T 61 T 61 3.627 0 0.100 0.901 4.414 46.667 48.367 LGA K 62 K 62 4.087 0 0.106 0.823 4.880 37.143 38.624 LGA A 63 A 63 4.214 0 0.083 0.077 4.804 37.143 36.000 LGA T 64 T 64 3.676 0 0.049 1.004 5.997 43.333 41.156 LGA I 65 I 65 4.141 0 0.104 0.117 5.548 38.690 33.810 LGA N 66 N 66 3.688 0 0.034 0.851 6.995 41.786 36.726 LGA I 67 I 67 4.369 0 0.063 1.143 6.910 37.143 27.976 LGA D 68 D 68 3.828 0 0.043 0.442 5.887 35.952 31.250 LGA A 69 A 69 5.009 0 0.151 0.253 6.668 22.500 26.667 LGA I 70 I 70 10.633 0 0.567 1.589 15.778 1.190 0.595 LGA S 71 S 71 12.468 0 0.178 0.239 15.555 0.000 0.000 LGA G 72 G 72 11.498 0 0.328 0.328 11.897 1.429 1.429 LGA F 73 F 73 4.357 0 0.389 1.035 6.807 37.738 41.775 LGA A 74 A 74 3.775 0 0.016 0.016 4.213 40.238 39.619 LGA Y 75 Y 75 3.022 0 0.019 1.062 7.310 53.571 42.063 LGA E 76 E 76 2.525 0 0.009 0.127 2.873 59.048 64.021 LGA Y 77 Y 77 2.120 0 0.063 0.240 3.449 70.952 60.595 LGA T 78 T 78 1.922 0 0.040 0.091 2.166 70.833 70.544 LGA L 79 L 79 1.885 0 0.025 0.141 1.902 72.857 72.857 LGA E 80 E 80 2.048 0 0.053 0.690 2.371 66.786 74.127 LGA I 81 I 81 2.156 0 0.095 1.174 4.328 64.762 57.857 LGA N 82 N 82 2.313 0 0.089 0.951 3.064 59.167 61.250 LGA G 83 G 83 2.512 0 0.077 0.077 2.512 62.857 62.857 LGA K 84 K 84 2.321 0 0.052 1.006 4.469 66.786 56.984 LGA S 85 S 85 1.997 0 0.062 0.290 3.376 61.190 62.460 LGA L 86 L 86 3.855 0 0.069 0.245 7.120 48.452 36.071 LGA K 87 K 87 5.951 0 0.016 0.942 12.847 21.548 10.688 LGA K 88 K 88 5.148 0 0.016 1.087 8.581 16.310 36.667 LGA Y 89 Y 89 9.957 0 0.610 1.421 15.488 3.333 1.111 LGA M 90 M 90 7.798 1 0.014 1.089 9.003 3.214 3.333 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 359 99.72 716 715 99.86 90 SUMMARY(RMSD_GDC): 6.733 6.654 7.618 37.888 33.694 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 45 2.61 48.333 40.880 1.661 LGA_LOCAL RMSD: 2.609 Number of atoms: 45 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.423 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 6.733 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.024138 * X + -0.392104 * Y + 0.919604 * Z + 34.575378 Y_new = 0.410025 * X + -0.842825 * Y + -0.348605 * Z + 12.176696 Z_new = 0.911755 * X + 0.368646 * Y + 0.181117 * Z + -8.975010 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.629599 -1.147536 1.114130 [DEG: 93.3691 -65.7490 63.8350 ] ZXZ: 1.208452 1.388674 1.186566 [DEG: 69.2392 79.5652 67.9852 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS403_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS403_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 45 2.61 40.880 6.73 REMARK ---------------------------------------------------------- MOLECULE T0540TS403_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 29.450 7.216 5.476 1.00 0.00 N ATOM 2 CA MET 1 29.208 7.245 4.032 1.00 0.00 C ATOM 3 C MET 1 29.498 8.663 3.545 1.00 0.00 C ATOM 4 O MET 1 30.178 9.426 4.228 1.00 0.00 O ATOM 5 CB MET 1 27.774 6.785 3.693 1.00 0.00 C ATOM 6 CG MET 1 27.508 5.291 3.909 1.00 0.00 C ATOM 7 SD MET 1 28.517 4.238 2.850 1.00 0.00 S ATOM 8 CE MET 1 27.849 2.648 3.370 1.00 0.00 C ATOM 9 N THR 2 28.948 9.006 2.367 1.00 0.00 N ATOM 10 CA THR 2 29.168 10.339 1.802 1.00 0.00 C ATOM 11 C THR 2 28.716 11.531 2.645 1.00 0.00 C ATOM 12 O THR 2 29.138 12.668 2.453 1.00 0.00 O ATOM 13 CB THR 2 28.551 10.380 0.401 1.00 0.00 C ATOM 14 CG2 THR 2 29.621 10.152 -0.671 1.00 0.00 C ATOM 15 OG1 THR 2 27.511 9.388 0.284 1.00 0.00 O ATOM 16 N ASP 3 27.845 11.228 3.617 1.00 0.00 N ATOM 17 CA ASP 3 27.475 12.266 4.577 1.00 0.00 C ATOM 18 C ASP 3 28.600 12.704 5.507 1.00 0.00 C ATOM 19 O ASP 3 28.660 13.845 5.961 1.00 0.00 O ATOM 20 CB ASP 3 26.190 11.873 5.337 1.00 0.00 C ATOM 21 CG ASP 3 26.337 10.651 6.240 1.00 0.00 C ATOM 22 OD1 ASP 3 26.910 9.641 5.828 1.00 0.00 O ATOM 23 OD2 ASP 3 25.855 10.696 7.374 1.00 0.00 O ATOM 24 N LEU 4 29.517 11.759 5.744 1.00 0.00 N ATOM 25 CA LEU 4 30.736 12.137 6.454 1.00 0.00 C ATOM 26 C LEU 4 31.792 12.728 5.539 1.00 0.00 C ATOM 27 O LEU 4 32.403 13.751 5.831 1.00 0.00 O ATOM 28 CB LEU 4 31.341 10.948 7.212 1.00 0.00 C ATOM 29 CG LEU 4 30.858 10.761 8.655 1.00 0.00 C ATOM 30 CD1 LEU 4 29.386 10.359 8.761 1.00 0.00 C ATOM 31 CD2 LEU 4 31.758 9.780 9.408 1.00 0.00 C ATOM 32 N VAL 5 32.006 12.016 4.428 1.00 0.00 N ATOM 33 CA VAL 5 33.150 12.408 3.608 1.00 0.00 C ATOM 34 C VAL 5 32.777 13.053 2.281 1.00 0.00 C ATOM 35 O VAL 5 32.095 12.479 1.436 1.00 0.00 O ATOM 36 CB VAL 5 34.111 11.208 3.465 1.00 0.00 C ATOM 37 CG1 VAL 5 33.446 9.980 2.833 1.00 0.00 C ATOM 38 CG2 VAL 5 35.418 11.599 2.772 1.00 0.00 C ATOM 39 N ALA 6 33.244 14.299 2.141 1.00 0.00 N ATOM 40 CA ALA 6 32.978 14.971 0.871 1.00 0.00 C ATOM 41 C ALA 6 34.093 14.727 -0.129 1.00 0.00 C ATOM 42 O ALA 6 35.215 14.409 0.250 1.00 0.00 O ATOM 43 CB ALA 6 32.804 16.477 1.081 1.00 0.00 C ATOM 44 N VAL 7 33.737 14.878 -1.412 1.00 0.00 N ATOM 45 CA VAL 7 34.721 14.664 -2.476 1.00 0.00 C ATOM 46 C VAL 7 34.510 15.613 -3.642 1.00 0.00 C ATOM 47 O VAL 7 33.387 15.867 -4.073 1.00 0.00 O ATOM 48 CB VAL 7 34.721 13.210 -2.989 1.00 0.00 C ATOM 49 CG1 VAL 7 35.638 12.309 -2.161 1.00 0.00 C ATOM 50 CG2 VAL 7 33.306 12.636 -3.112 1.00 0.00 C ATOM 51 N TRP 8 35.653 16.116 -4.123 1.00 0.00 N ATOM 52 CA TRP 8 35.670 16.989 -5.293 1.00 0.00 C ATOM 53 C TRP 8 36.675 16.478 -6.309 1.00 0.00 C ATOM 54 O TRP 8 37.685 15.877 -5.950 1.00 0.00 O ATOM 55 CB TRP 8 36.077 18.412 -4.900 1.00 0.00 C ATOM 56 CG TRP 8 35.110 19.042 -3.923 1.00 0.00 C ATOM 57 CD1 TRP 8 33.824 19.529 -4.198 1.00 0.00 C ATOM 58 CD2 TRP 8 35.319 19.300 -2.520 1.00 0.00 C ATOM 59 CE2 TRP 8 34.132 19.935 -2.022 1.00 0.00 C ATOM 60 CE3 TRP 8 36.404 19.055 -1.652 1.00 0.00 C ATOM 61 NE1 TRP 8 33.243 20.055 -3.086 1.00 0.00 N ATOM 62 CZ2 TRP 8 34.057 20.312 -0.665 1.00 0.00 C ATOM 63 CZ3 TRP 8 36.316 19.438 -0.298 1.00 0.00 C ATOM 64 CH2 TRP 8 35.148 20.063 0.193 1.00 0.00 H ATOM 65 N ASP 9 36.370 16.762 -7.581 1.00 0.00 N ATOM 66 CA ASP 9 37.335 16.448 -8.639 1.00 0.00 C ATOM 67 C ASP 9 37.722 17.723 -9.356 1.00 0.00 C ATOM 68 O ASP 9 36.860 18.449 -9.848 1.00 0.00 O ATOM 69 CB ASP 9 36.750 15.487 -9.688 1.00 0.00 C ATOM 70 CG ASP 9 36.600 14.054 -9.197 1.00 0.00 C ATOM 71 OD1 ASP 9 37.583 13.311 -9.193 1.00 0.00 O ATOM 72 OD2 ASP 9 35.489 13.646 -8.855 1.00 0.00 O ATOM 73 N VAL 10 39.032 17.986 -9.405 1.00 0.00 N ATOM 74 CA VAL 10 39.446 19.222 -10.067 1.00 0.00 C ATOM 75 C VAL 10 40.676 19.017 -10.938 1.00 0.00 C ATOM 76 O VAL 10 41.586 18.271 -10.599 1.00 0.00 O ATOM 77 CB VAL 10 39.645 20.336 -9.017 1.00 0.00 C ATOM 78 CG1 VAL 10 40.708 19.972 -7.977 1.00 0.00 C ATOM 79 CG2 VAL 10 39.873 21.716 -9.643 1.00 0.00 C ATOM 80 N ALA 11 40.677 19.713 -12.084 1.00 0.00 N ATOM 81 CA ALA 11 41.931 19.747 -12.833 1.00 0.00 C ATOM 82 C ALA 11 42.913 20.725 -12.213 1.00 0.00 C ATOM 83 O ALA 11 42.880 21.931 -12.455 1.00 0.00 O ATOM 84 CB ALA 11 41.686 20.122 -14.297 1.00 0.00 C ATOM 85 N LEU 12 43.767 20.151 -11.367 1.00 0.00 N ATOM 86 CA LEU 12 44.705 20.969 -10.613 1.00 0.00 C ATOM 87 C LEU 12 46.095 20.386 -10.780 1.00 0.00 C ATOM 88 O LEU 12 46.246 19.186 -10.979 1.00 0.00 O ATOM 89 CB LEU 12 44.269 21.005 -9.144 1.00 0.00 C ATOM 90 CG LEU 12 44.889 22.113 -8.289 1.00 0.00 C ATOM 91 CD1 LEU 12 44.519 23.508 -8.800 1.00 0.00 C ATOM 92 CD2 LEU 12 44.537 21.941 -6.810 1.00 0.00 C ATOM 93 N SER 13 47.104 21.274 -10.735 1.00 0.00 N ATOM 94 CA SER 13 48.490 20.824 -10.914 1.00 0.00 C ATOM 95 C SER 13 48.738 20.021 -12.192 1.00 0.00 C ATOM 96 O SER 13 49.505 19.060 -12.226 1.00 0.00 O ATOM 97 CB SER 13 48.977 20.083 -9.654 1.00 0.00 C ATOM 98 OG SER 13 50.404 20.197 -9.499 1.00 0.00 O ATOM 99 N ASP 14 48.023 20.470 -13.243 1.00 0.00 N ATOM 100 CA ASP 14 48.041 19.807 -14.552 1.00 0.00 C ATOM 101 C ASP 14 47.672 18.330 -14.545 1.00 0.00 C ATOM 102 O ASP 14 48.181 17.522 -15.323 1.00 0.00 O ATOM 103 CB ASP 14 49.364 20.041 -15.310 1.00 0.00 C ATOM 104 CG ASP 14 49.507 21.483 -15.773 1.00 0.00 C ATOM 105 OD1 ASP 14 48.676 21.955 -16.550 1.00 0.00 O ATOM 106 OD2 ASP 14 50.464 22.151 -15.382 1.00 0.00 O ATOM 107 N GLY 15 46.742 18.009 -13.642 1.00 0.00 N ATOM 108 CA GLY 15 46.259 16.638 -13.577 1.00 0.00 C ATOM 109 C GLY 15 44.872 16.613 -12.974 1.00 0.00 C ATOM 110 O GLY 15 44.314 17.643 -12.609 1.00 0.00 O ATOM 111 N VAL 16 44.329 15.395 -12.885 1.00 0.00 N ATOM 112 CA VAL 16 43.046 15.313 -12.194 1.00 0.00 C ATOM 113 C VAL 16 43.256 15.059 -10.712 1.00 0.00 C ATOM 114 O VAL 16 43.410 13.932 -10.247 1.00 0.00 O ATOM 115 CB VAL 16 42.122 14.259 -12.829 1.00 0.00 C ATOM 116 CG1 VAL 16 40.718 14.308 -12.215 1.00 0.00 C ATOM 117 CG2 VAL 16 42.059 14.423 -14.350 1.00 0.00 C ATOM 118 N HIS 17 43.292 16.180 -9.995 1.00 0.00 N ATOM 119 CA HIS 17 43.450 16.074 -8.553 1.00 0.00 C ATOM 120 C HIS 17 42.165 15.743 -7.831 1.00 0.00 C ATOM 121 O HIS 17 41.115 16.350 -8.020 1.00 0.00 O ATOM 122 CB HIS 17 44.067 17.347 -7.980 1.00 0.00 C ATOM 123 CG HIS 17 45.539 17.121 -7.734 1.00 0.00 C ATOM 124 CD2 HIS 17 46.554 16.952 -8.681 1.00 0.00 C ATOM 125 ND1 HIS 17 46.076 17.042 -6.504 1.00 0.00 N ATOM 126 CE1 HIS 17 47.418 16.824 -6.659 1.00 0.00 C ATOM 127 NE2 HIS 17 47.714 16.769 -7.999 1.00 0.00 N ATOM 128 N LYS 18 42.311 14.731 -6.974 1.00 0.00 N ATOM 129 CA LYS 18 41.196 14.435 -6.084 1.00 0.00 C ATOM 130 C LYS 18 41.325 15.227 -4.796 1.00 0.00 C ATOM 131 O LYS 18 42.363 15.222 -4.139 1.00 0.00 O ATOM 132 CB LYS 18 41.101 12.917 -5.854 1.00 0.00 C ATOM 133 CG LYS 18 42.343 12.272 -5.217 1.00 0.00 C ATOM 134 CD LYS 18 42.314 10.741 -5.125 1.00 0.00 C ATOM 135 CE LYS 18 42.816 9.978 -6.370 1.00 0.00 C ATOM 136 NZ LYS 18 41.945 10.103 -7.543 1.00 0.00 N ATOM 137 N ILE 19 40.243 15.935 -4.470 1.00 0.00 N ATOM 138 CA ILE 19 40.262 16.603 -3.173 1.00 0.00 C ATOM 139 C ILE 19 39.191 16.021 -2.273 1.00 0.00 C ATOM 140 O ILE 19 37.992 16.192 -2.463 1.00 0.00 O ATOM 141 CB ILE 19 40.173 18.136 -3.316 1.00 0.00 C ATOM 142 CG1 ILE 19 41.395 18.614 -4.115 1.00 0.00 C ATOM 143 CG2 ILE 19 40.150 18.805 -1.935 1.00 0.00 C ATOM 144 CD1 ILE 19 41.559 20.133 -4.201 1.00 0.00 C ATOM 145 N GLU 20 39.706 15.270 -1.299 1.00 0.00 N ATOM 146 CA GLU 20 38.805 14.616 -0.359 1.00 0.00 C ATOM 147 C GLU 20 38.597 15.500 0.859 1.00 0.00 C ATOM 148 O GLU 20 39.384 16.406 1.114 1.00 0.00 O ATOM 149 CB GLU 20 39.403 13.239 -0.033 1.00 0.00 C ATOM 150 CG GLU 20 38.457 12.211 0.601 1.00 0.00 C ATOM 151 CD GLU 20 39.121 10.846 0.681 1.00 0.00 C ATOM 152 OE1 GLU 20 40.206 10.728 1.253 1.00 0.00 O ATOM 153 OE2 GLU 20 38.560 9.874 0.170 1.00 0.00 O ATOM 154 N PHE 21 37.519 15.212 1.590 1.00 0.00 N ATOM 155 CA PHE 21 37.272 15.937 2.830 1.00 0.00 C ATOM 156 C PHE 21 36.846 14.972 3.915 1.00 0.00 C ATOM 157 O PHE 21 35.667 14.675 4.089 1.00 0.00 O ATOM 158 CB PHE 21 36.211 17.022 2.595 1.00 0.00 C ATOM 159 CG PHE 21 36.160 18.049 3.708 1.00 0.00 C ATOM 160 CD1 PHE 21 36.650 19.348 3.453 1.00 0.00 C ATOM 161 CD2 PHE 21 35.612 17.711 4.966 1.00 0.00 C ATOM 162 CE1 PHE 21 36.578 20.328 4.462 1.00 0.00 C ATOM 163 CE2 PHE 21 35.546 18.685 5.979 1.00 0.00 C ATOM 164 CZ PHE 21 36.019 19.986 5.711 1.00 0.00 C ATOM 165 N GLU 22 37.857 14.492 4.647 1.00 0.00 N ATOM 166 CA GLU 22 37.533 13.720 5.842 1.00 0.00 C ATOM 167 C GLU 22 37.091 14.629 6.968 1.00 0.00 C ATOM 168 O GLU 22 37.815 15.529 7.376 1.00 0.00 O ATOM 169 CB GLU 22 38.723 12.894 6.337 1.00 0.00 C ATOM 170 CG GLU 22 39.209 11.805 5.376 1.00 0.00 C ATOM 171 CD GLU 22 40.249 10.935 6.067 1.00 0.00 C ATOM 172 OE1 GLU 22 41.378 11.381 6.270 1.00 0.00 O ATOM 173 OE2 GLU 22 39.945 9.789 6.407 1.00 0.00 O ATOM 174 N HIS 23 35.878 14.339 7.460 1.00 0.00 N ATOM 175 CA HIS 23 35.314 15.115 8.566 1.00 0.00 C ATOM 176 C HIS 23 36.222 15.217 9.792 1.00 0.00 C ATOM 177 O HIS 23 36.553 16.301 10.267 1.00 0.00 O ATOM 178 CB HIS 23 33.933 14.534 8.920 1.00 0.00 C ATOM 179 CG HIS 23 33.302 15.234 10.105 1.00 0.00 C ATOM 180 CD2 HIS 23 32.903 16.570 10.204 1.00 0.00 C ATOM 181 ND1 HIS 23 33.037 14.617 11.272 1.00 0.00 N ATOM 182 CE1 HIS 23 32.475 15.543 12.107 1.00 0.00 C ATOM 183 NE2 HIS 23 32.393 16.746 11.450 1.00 0.00 N ATOM 184 N GLY 24 36.608 14.023 10.276 1.00 0.00 N ATOM 185 CA GLY 24 37.262 13.911 11.582 1.00 0.00 C ATOM 186 C GLY 24 38.427 14.854 11.839 1.00 0.00 C ATOM 187 O GLY 24 38.516 15.526 12.866 1.00 0.00 O ATOM 188 N THR 25 39.322 14.877 10.851 0.00 0.00 N ATOM 189 CA THR 25 40.428 15.815 10.990 0.00 0.00 C ATOM 190 C THR 25 40.268 17.094 10.163 0.00 0.00 C ATOM 191 O THR 25 41.009 18.060 10.318 0.00 0.00 O ATOM 192 CB THR 25 41.750 15.083 10.704 0.00 0.00 C ATOM 193 CG2 THR 25 42.976 15.826 11.247 0.00 0.00 C ATOM 194 OG1 THR 25 41.700 13.751 11.254 0.00 0.00 O ATOM 195 N THR 26 39.250 17.069 9.274 0.00 0.00 N ATOM 196 CA THR 26 39.091 18.140 8.290 0.00 0.00 C ATOM 197 C THR 26 40.313 18.204 7.377 0.00 0.00 C ATOM 198 O THR 26 41.186 19.065 7.466 0.00 0.00 O ATOM 199 CB THR 26 38.748 19.465 8.994 0.00 0.00 C ATOM 200 CG2 THR 26 38.478 20.629 8.039 0.00 0.00 C ATOM 201 OG1 THR 26 37.628 19.269 9.877 0.00 0.00 O ATOM 202 N SER 27 40.372 17.168 6.534 0.00 0.00 N ATOM 203 CA SER 27 41.616 16.964 5.801 0.00 0.00 C ATOM 204 C SER 27 41.420 16.349 4.427 0.00 0.00 C ATOM 205 O SER 27 40.454 15.633 4.183 0.00 0.00 O ATOM 206 CB SER 27 42.575 16.112 6.643 0.00 0.00 C ATOM 207 OG SER 27 42.689 16.666 7.963 0.00 0.00 O ATOM 208 N GLY 28 42.383 16.654 3.550 0.00 0.00 N ATOM 209 CA GLY 28 42.337 16.075 2.214 0.00 0.00 C ATOM 210 C GLY 28 43.726 15.752 1.709 0.00 0.00 C ATOM 211 O GLY 28 44.525 16.631 1.401 0.00 0.00 O ATOM 212 N LYS 29 43.991 14.443 1.669 0.00 0.00 N ATOM 213 CA LYS 29 45.298 14.022 1.170 0.00 0.00 C ATOM 214 C LYS 29 45.292 13.878 -0.339 0.00 0.00 C ATOM 215 O LYS 29 44.293 13.491 -0.939 0.00 0.00 O ATOM 216 CB LYS 29 45.727 12.714 1.838 0.00 0.00 C ATOM 217 CG LYS 29 45.790 12.818 3.365 0.00 0.00 C ATOM 218 CD LYS 29 46.077 11.473 4.033 0.00 0.00 C ATOM 219 CE LYS 29 46.093 11.567 5.567 0.00 0.00 C ATOM 220 NZ LYS 29 46.301 10.251 6.176 0.00 0.00 N ATOM 221 N ARG 30 46.437 14.227 -0.929 0.00 0.00 N ATOM 222 CA ARG 30 46.489 14.186 -2.387 0.00 0.00 C ATOM 223 C ARG 30 47.259 12.982 -2.892 0.00 0.00 C ATOM 224 O ARG 30 48.449 12.824 -2.640 0.00 0.00 O ATOM 225 CB ARG 30 47.058 15.502 -2.922 0.00 0.00 C ATOM 226 CG ARG 30 46.137 16.680 -2.587 0.00 0.00 C ATOM 227 CD ARG 30 46.684 18.040 -3.024 0.00 0.00 C ATOM 228 NE ARG 30 45.706 19.097 -2.770 0.00 0.00 N ATOM 229 CZ ARG 30 45.896 20.375 -3.181 0.00 0.00 C ATOM 230 NH1 ARG 30 46.992 20.737 -3.844 0.00 0.00 H ATOM 231 NH2 ARG 30 44.966 21.284 -2.914 0.00 0.00 H ATOM 232 N VAL 31 46.505 12.123 -3.589 0.00 0.00 N ATOM 233 CA VAL 31 47.071 10.851 -4.036 0.00 0.00 C ATOM 234 C VAL 31 47.179 10.805 -5.552 0.00 0.00 C ATOM 235 O VAL 31 46.186 10.943 -6.263 0.00 0.00 O ATOM 236 CB VAL 31 46.210 9.687 -3.511 0.00 0.00 C ATOM 237 CG1 VAL 31 46.723 8.318 -3.966 0.00 0.00 C ATOM 238 CG2 VAL 31 46.068 9.746 -1.988 0.00 0.00 C ATOM 239 N VAL 32 48.421 10.622 -6.016 0.00 0.00 N ATOM 240 CA VAL 32 48.648 10.510 -7.457 0.00 0.00 C ATOM 241 C VAL 32 49.520 9.292 -7.719 0.00 0.00 C ATOM 242 O VAL 32 50.536 9.096 -7.061 0.00 0.00 O ATOM 243 CB VAL 32 49.312 11.784 -8.025 0.00 0.00 C ATOM 244 CG1 VAL 32 49.492 11.707 -9.546 0.00 0.00 C ATOM 245 CG2 VAL 32 48.561 13.062 -7.638 0.00 0.00 C ATOM 246 N TYR 33 49.072 8.468 -8.688 0.00 0.00 N ATOM 247 CA TYR 33 49.797 7.237 -9.026 0.00 0.00 C ATOM 248 C TYR 33 50.051 6.331 -7.822 0.00 0.00 C ATOM 249 O TYR 33 51.159 5.884 -7.539 0.00 0.00 O ATOM 250 CB TYR 33 51.073 7.561 -9.839 0.00 0.00 C ATOM 251 CG TYR 33 51.763 6.323 -10.384 0.00 0.00 C ATOM 252 CD1 TYR 33 51.056 5.427 -11.213 0.00 0.00 C ATOM 253 CD2 TYR 33 53.112 6.103 -10.039 0.00 0.00 C ATOM 254 CE1 TYR 33 51.710 4.278 -11.693 0.00 0.00 C ATOM 255 CE2 TYR 33 53.766 4.956 -10.518 0.00 0.00 C ATOM 256 CZ TYR 33 53.056 4.054 -11.337 0.00 0.00 C ATOM 257 OH TYR 33 53.708 2.921 -11.799 0.00 0.00 H ATOM 258 N VAL 34 48.930 6.094 -7.115 0.00 0.00 N ATOM 259 CA VAL 34 48.884 5.266 -5.903 0.00 0.00 C ATOM 260 C VAL 34 49.504 5.884 -4.646 0.00 0.00 C ATOM 261 O VAL 34 48.955 5.778 -3.551 0.00 0.00 O ATOM 262 CB VAL 34 49.376 3.818 -6.162 0.00 0.00 C ATOM 263 CG1 VAL 34 49.239 2.904 -4.938 0.00 0.00 C ATOM 264 CG2 VAL 34 48.646 3.202 -7.361 0.00 0.00 C ATOM 265 N ASP 35 50.649 6.552 -4.831 0.00 0.00 N ATOM 266 CA ASP 35 51.260 7.199 -3.671 0.00 0.00 C ATOM 267 C ASP 35 50.536 8.453 -3.222 0.00 0.00 C ATOM 268 O ASP 35 50.046 9.259 -4.007 0.00 0.00 O ATOM 269 CB ASP 35 52.741 7.515 -3.928 0.00 0.00 C ATOM 270 CG ASP 35 53.645 6.370 -3.496 0.00 0.00 C ATOM 271 OD1 ASP 35 53.498 5.866 -2.382 0.00 0.00 O ATOM 272 OD2 ASP 35 54.527 5.976 -4.261 0.00 0.00 O ATOM 273 N GLY 36 50.494 8.584 -1.893 0.00 0.00 N ATOM 274 CA GLY 36 50.012 9.849 -1.351 0.00 0.00 C ATOM 275 C GLY 36 51.145 10.847 -1.284 0.00 0.00 C ATOM 276 O GLY 36 52.090 10.698 -0.512 0.00 0.00 O ATOM 277 N LYS 37 51.031 11.855 -2.151 0.00 0.00 N ATOM 278 CA LYS 37 52.092 12.855 -2.177 0.00 0.00 C ATOM 279 C LYS 37 52.053 13.823 -1.008 0.00 0.00 C ATOM 280 O LYS 37 52.989 13.920 -0.217 0.00 0.00 O ATOM 281 CB LYS 37 52.098 13.617 -3.508 0.00 0.00 C ATOM 282 CG LYS 37 52.433 12.750 -4.724 0.00 0.00 C ATOM 283 CD LYS 37 52.581 13.597 -5.990 0.00 0.00 C ATOM 284 CE LYS 37 53.029 12.784 -7.215 0.00 0.00 C ATOM 285 NZ LYS 37 53.227 13.655 -8.377 0.00 0.00 N ATOM 286 N GLU 38 50.934 14.555 -0.944 1.00 0.00 N ATOM 287 CA GLU 38 50.911 15.648 0.025 1.00 0.00 C ATOM 288 C GLU 38 49.809 15.514 1.051 1.00 0.00 C ATOM 289 O GLU 38 48.714 15.029 0.774 1.00 0.00 O ATOM 290 CB GLU 38 50.796 17.003 -0.688 1.00 0.00 C ATOM 291 CG GLU 38 52.062 17.474 -1.426 1.00 0.00 C ATOM 292 CD GLU 38 53.065 18.144 -0.492 1.00 0.00 C ATOM 293 OE1 GLU 38 53.584 17.506 0.422 1.00 0.00 O ATOM 294 OE2 GLU 38 53.355 19.327 -0.684 1.00 0.00 O ATOM 295 N GLU 39 50.154 15.984 2.255 1.00 0.00 N ATOM 296 CA GLU 39 49.100 16.214 3.240 1.00 0.00 C ATOM 297 C GLU 39 48.604 17.647 3.138 1.00 0.00 C ATOM 298 O GLU 39 49.206 18.481 2.466 1.00 0.00 O ATOM 299 CB GLU 39 49.590 15.874 4.657 1.00 0.00 C ATOM 300 CG GLU 39 50.799 16.694 5.144 1.00 0.00 C ATOM 301 CD GLU 39 51.220 16.327 6.563 1.00 0.00 C ATOM 302 OE1 GLU 39 50.751 15.329 7.114 1.00 0.00 O ATOM 303 OE2 GLU 39 52.038 17.041 7.142 1.00 0.00 O ATOM 304 N ILE 40 47.482 17.910 3.814 1.00 0.00 N ATOM 305 CA ILE 40 47.032 19.298 3.794 1.00 0.00 C ATOM 306 C ILE 40 47.601 20.086 4.968 1.00 0.00 C ATOM 307 O ILE 40 47.685 19.594 6.091 1.00 0.00 O ATOM 308 CB ILE 40 45.489 19.362 3.727 1.00 0.00 C ATOM 309 CG1 ILE 40 44.972 20.765 3.383 1.00 0.00 C ATOM 310 CG2 ILE 40 44.858 18.849 5.028 1.00 0.00 C ATOM 311 CD1 ILE 40 43.446 20.843 3.296 1.00 0.00 C ATOM 312 N ARG 41 47.978 21.336 4.679 1.00 0.00 N ATOM 313 CA ARG 41 48.242 22.186 5.830 1.00 0.00 C ATOM 314 C ARG 41 47.275 23.346 5.923 1.00 0.00 C ATOM 315 O ARG 41 47.537 24.477 5.522 1.00 0.00 O ATOM 316 CB ARG 41 49.709 22.612 5.910 1.00 0.00 C ATOM 317 CG ARG 41 50.089 22.875 7.369 1.00 0.00 C ATOM 318 CD ARG 41 51.593 23.039 7.597 1.00 0.00 C ATOM 319 NE ARG 41 51.888 23.116 9.028 1.00 0.00 N ATOM 320 CZ ARG 41 52.143 22.010 9.773 1.00 0.00 C ATOM 321 NH1 ARG 41 52.212 20.801 9.221 1.00 0.00 H ATOM 322 NH2 ARG 41 52.325 22.142 11.082 1.00 0.00 H ATOM 323 N LYS 42 46.109 22.974 6.460 1.00 0.00 N ATOM 324 CA LYS 42 45.057 23.965 6.686 1.00 0.00 C ATOM 325 C LYS 42 45.440 24.999 7.742 1.00 0.00 C ATOM 326 O LYS 42 46.279 24.758 8.603 1.00 0.00 O ATOM 327 CB LYS 42 43.745 23.255 7.069 1.00 0.00 C ATOM 328 CG LYS 42 43.937 22.327 8.275 1.00 0.00 C ATOM 329 CD LYS 42 42.676 21.738 8.904 1.00 0.00 C ATOM 330 CE LYS 42 43.068 20.920 10.147 1.00 0.00 C ATOM 331 NZ LYS 42 41.906 20.466 10.910 1.00 0.00 N ATOM 332 N GLU 43 44.763 26.151 7.649 1.00 0.00 N ATOM 333 CA GLU 43 44.955 27.156 8.698 1.00 0.00 C ATOM 334 C GLU 43 44.000 27.044 9.880 1.00 0.00 C ATOM 335 O GLU 43 44.138 27.748 10.875 1.00 0.00 O ATOM 336 CB GLU 43 44.882 28.570 8.109 1.00 0.00 C ATOM 337 CG GLU 43 46.136 29.022 7.343 1.00 0.00 C ATOM 338 CD GLU 43 47.248 29.454 8.289 1.00 0.00 C ATOM 339 OE1 GLU 43 47.080 30.442 9.005 1.00 0.00 O ATOM 340 OE2 GLU 43 48.307 28.826 8.309 1.00 0.00 O ATOM 341 N TRP 44 43.007 26.141 9.720 1.00 0.00 N ATOM 342 CA TRP 44 41.960 25.922 10.726 1.00 0.00 C ATOM 343 C TRP 44 41.358 27.152 11.398 1.00 0.00 C ATOM 344 O TRP 44 41.207 27.237 12.614 1.00 0.00 O ATOM 345 CB TRP 44 42.326 24.798 11.727 1.00 0.00 C ATOM 346 CG TRP 44 43.621 25.009 12.492 1.00 0.00 C ATOM 347 CD1 TRP 44 43.833 25.854 13.596 1.00 0.00 C ATOM 348 CD2 TRP 44 44.896 24.364 12.274 1.00 0.00 C ATOM 349 CE2 TRP 44 45.808 24.860 13.266 1.00 0.00 C ATOM 350 CE3 TRP 44 45.340 23.410 11.336 1.00 0.00 C ATOM 351 NE1 TRP 44 45.112 25.772 14.054 1.00 0.00 N ATOM 352 CZ2 TRP 44 47.140 24.393 13.295 1.00 0.00 C ATOM 353 CZ3 TRP 44 46.672 22.948 11.373 1.00 0.00 C ATOM 354 CH2 TRP 44 47.568 23.438 12.348 1.00 0.00 H ATOM 355 N MET 45 41.017 28.122 10.540 1.00 0.00 N ATOM 356 CA MET 45 40.526 29.347 11.157 1.00 0.00 C ATOM 357 C MET 45 39.026 29.344 11.381 1.00 0.00 C ATOM 358 O MET 45 38.252 28.746 10.637 1.00 0.00 O ATOM 359 CB MET 45 41.037 30.586 10.402 1.00 0.00 C ATOM 360 CG MET 45 40.362 30.917 9.066 1.00 0.00 C ATOM 361 SD MET 45 38.730 31.657 9.257 1.00 0.00 S ATOM 362 CE MET 45 39.230 33.157 10.118 1.00 0.00 C ATOM 363 N PHE 46 38.658 30.027 12.468 1.00 0.00 N ATOM 364 CA PHE 46 37.240 30.067 12.796 1.00 0.00 C ATOM 365 C PHE 46 36.663 31.438 12.534 1.00 0.00 C ATOM 366 O PHE 46 37.185 32.455 12.985 1.00 0.00 O ATOM 367 CB PHE 46 37.003 29.651 14.255 1.00 0.00 C ATOM 368 CG PHE 46 37.693 28.339 14.557 1.00 0.00 C ATOM 369 CD1 PHE 46 37.208 27.142 13.988 1.00 0.00 C ATOM 370 CD2 PHE 46 38.824 28.339 15.403 1.00 0.00 C ATOM 371 CE1 PHE 46 37.870 25.929 14.260 1.00 0.00 C ATOM 372 CE2 PHE 46 39.486 27.127 15.677 1.00 0.00 C ATOM 373 CZ PHE 46 39.004 25.933 15.099 1.00 0.00 C ATOM 374 N LYS 47 35.575 31.427 11.764 1.00 0.00 N ATOM 375 CA LYS 47 34.881 32.689 11.550 1.00 0.00 C ATOM 376 C LYS 47 33.777 32.820 12.595 1.00 0.00 C ATOM 377 O LYS 47 33.609 31.941 13.438 1.00 0.00 O ATOM 378 CB LYS 47 34.378 32.720 10.098 1.00 0.00 C ATOM 379 CG LYS 47 34.281 34.109 9.452 1.00 0.00 C ATOM 380 CD LYS 47 35.628 34.832 9.377 1.00 0.00 C ATOM 381 CE LYS 47 35.518 36.216 8.716 1.00 0.00 C ATOM 382 NZ LYS 47 36.818 36.889 8.672 1.00 0.00 N ATOM 383 N LEU 48 33.024 33.929 12.528 1.00 0.00 N ATOM 384 CA LEU 48 31.856 33.988 13.409 1.00 0.00 C ATOM 385 C LEU 48 30.764 33.026 12.959 1.00 0.00 C ATOM 386 O LEU 48 30.202 32.252 13.731 1.00 0.00 O ATOM 387 CB LEU 48 31.292 35.414 13.536 1.00 0.00 C ATOM 388 CG LEU 48 32.122 36.414 14.360 1.00 0.00 C ATOM 389 CD1 LEU 48 32.511 35.846 15.727 1.00 0.00 C ATOM 390 CD2 LEU 48 33.319 36.996 13.601 1.00 0.00 C ATOM 391 N VAL 49 30.518 33.091 11.644 1.00 0.00 N ATOM 392 CA VAL 49 29.689 32.050 11.051 1.00 0.00 C ATOM 393 C VAL 49 30.548 31.180 10.151 1.00 0.00 C ATOM 394 O VAL 49 31.066 31.627 9.129 1.00 0.00 O ATOM 395 CB VAL 49 28.506 32.653 10.270 1.00 0.00 C ATOM 396 CG1 VAL 49 27.594 31.568 9.685 1.00 0.00 C ATOM 397 CG2 VAL 49 27.708 33.633 11.135 1.00 0.00 C ATOM 398 N GLY 50 30.675 29.921 10.574 1.00 0.00 N ATOM 399 CA GLY 50 31.419 29.000 9.725 1.00 0.00 C ATOM 400 C GLY 50 32.907 28.969 10.006 1.00 0.00 C ATOM 401 O GLY 50 33.417 29.602 10.928 1.00 0.00 O ATOM 402 N LYS 51 33.581 28.168 9.180 1.00 0.00 N ATOM 403 CA LYS 51 35.024 27.993 9.333 1.00 0.00 C ATOM 404 C LYS 51 35.640 28.180 7.962 1.00 0.00 C ATOM 405 O LYS 51 34.951 28.043 6.955 1.00 0.00 O ATOM 406 CB LYS 51 35.341 26.580 9.849 1.00 0.00 C ATOM 407 CG LYS 51 34.473 26.101 11.021 1.00 0.00 C ATOM 408 CD LYS 51 34.380 24.571 11.101 1.00 0.00 C ATOM 409 CE LYS 51 35.609 23.858 11.690 1.00 0.00 C ATOM 410 NZ LYS 51 35.451 23.651 13.133 1.00 0.00 N ATOM 411 N GLU 52 36.942 28.487 7.935 1.00 0.00 N ATOM 412 CA GLU 52 37.542 28.489 6.603 1.00 0.00 C ATOM 413 C GLU 52 38.734 27.565 6.508 1.00 0.00 C ATOM 414 O GLU 52 39.547 27.456 7.423 1.00 0.00 O ATOM 415 CB GLU 52 37.942 29.886 6.115 1.00 0.00 C ATOM 416 CG GLU 52 36.789 30.891 5.988 1.00 0.00 C ATOM 417 CD GLU 52 37.137 31.995 4.998 1.00 0.00 C ATOM 418 OE1 GLU 52 38.305 32.349 4.840 1.00 0.00 O ATOM 419 OE2 GLU 52 36.242 32.501 4.326 1.00 0.00 O ATOM 420 N THR 53 38.805 26.897 5.353 1.00 0.00 N ATOM 421 CA THR 53 40.003 26.094 5.149 1.00 0.00 C ATOM 422 C THR 53 40.856 26.622 4.015 1.00 0.00 C ATOM 423 O THR 53 40.385 26.848 2.908 1.00 0.00 O ATOM 424 CB THR 53 39.645 24.616 4.952 1.00 0.00 C ATOM 425 CG2 THR 53 39.371 23.939 6.294 1.00 0.00 C ATOM 426 OG1 THR 53 38.527 24.454 4.066 1.00 0.00 O ATOM 427 N PHE 54 42.133 26.834 4.350 1.00 0.00 N ATOM 428 CA PHE 54 43.056 27.294 3.318 1.00 0.00 C ATOM 429 C PHE 54 43.801 26.114 2.722 1.00 0.00 C ATOM 430 O PHE 54 44.194 25.196 3.436 1.00 0.00 O ATOM 431 CB PHE 54 43.995 28.342 3.933 1.00 0.00 C ATOM 432 CG PHE 54 44.902 28.983 2.906 1.00 0.00 C ATOM 433 CD1 PHE 54 44.348 29.746 1.853 1.00 0.00 C ATOM 434 CD2 PHE 54 46.297 28.814 3.030 1.00 0.00 C ATOM 435 CE1 PHE 54 45.205 30.348 0.912 1.00 0.00 C ATOM 436 CE2 PHE 54 47.155 29.418 2.091 1.00 0.00 C ATOM 437 CZ PHE 54 46.600 30.179 1.042 1.00 0.00 C ATOM 438 N TYR 55 43.942 26.156 1.394 1.00 0.00 N ATOM 439 CA TYR 55 44.630 25.044 0.743 1.00 0.00 C ATOM 440 C TYR 55 46.018 25.441 0.279 1.00 0.00 C ATOM 441 O TYR 55 46.417 26.600 0.345 1.00 0.00 O ATOM 442 CB TYR 55 43.789 24.494 -0.418 1.00 0.00 C ATOM 443 CG TYR 55 42.637 23.642 0.071 1.00 0.00 C ATOM 444 CD1 TYR 55 41.625 24.208 0.875 1.00 0.00 C ATOM 445 CD2 TYR 55 42.607 22.284 -0.305 1.00 0.00 C ATOM 446 CE1 TYR 55 40.576 23.395 1.330 1.00 0.00 C ATOM 447 CE2 TYR 55 41.550 21.473 0.139 1.00 0.00 C ATOM 448 CZ TYR 55 40.550 22.038 0.955 1.00 0.00 C ATOM 449 OH TYR 55 39.516 21.235 1.400 1.00 0.00 H ATOM 450 N VAL 56 46.751 24.419 -0.175 1.00 0.00 N ATOM 451 CA VAL 56 48.108 24.708 -0.627 1.00 0.00 C ATOM 452 C VAL 56 48.201 24.760 -2.148 1.00 0.00 C ATOM 453 O VAL 56 47.610 23.951 -2.864 1.00 0.00 O ATOM 454 CB VAL 56 49.093 23.705 0.017 1.00 0.00 C ATOM 455 CG1 VAL 56 48.813 22.252 -0.388 1.00 0.00 C ATOM 456 CG2 VAL 56 50.556 24.110 -0.189 1.00 0.00 C ATOM 457 N GLY 57 48.955 25.764 -2.606 1.00 0.00 N ATOM 458 CA GLY 57 49.143 25.930 -4.041 1.00 0.00 C ATOM 459 C GLY 57 49.693 27.309 -4.344 1.00 0.00 C ATOM 460 O GLY 57 49.906 28.123 -3.447 1.00 0.00 O ATOM 461 N ALA 58 49.918 27.539 -5.645 1.00 0.00 N ATOM 462 CA ALA 58 50.311 28.891 -6.035 1.00 0.00 C ATOM 463 C ALA 58 49.107 29.817 -6.126 1.00 0.00 C ATOM 464 O ALA 58 49.061 30.896 -5.537 1.00 0.00 O ATOM 465 CB ALA 58 51.056 28.884 -7.374 1.00 0.00 C ATOM 466 N ALA 59 48.110 29.312 -6.873 1.00 0.00 N ATOM 467 CA ALA 59 46.812 29.974 -6.840 1.00 0.00 C ATOM 468 C ALA 59 46.079 29.612 -5.563 1.00 0.00 C ATOM 469 O ALA 59 46.193 28.504 -5.043 1.00 0.00 O ATOM 470 CB ALA 59 45.957 29.566 -8.043 1.00 0.00 C ATOM 471 N LYS 60 45.357 30.613 -5.053 1.00 0.00 N ATOM 472 CA LYS 60 44.779 30.397 -3.732 1.00 0.00 C ATOM 473 C LYS 60 43.469 29.646 -3.800 1.00 0.00 C ATOM 474 O LYS 60 42.459 30.113 -4.320 1.00 0.00 O ATOM 475 CB LYS 60 44.653 31.711 -2.943 1.00 0.00 C ATOM 476 CG LYS 60 45.961 32.159 -2.269 1.00 0.00 C ATOM 477 CD LYS 60 47.084 32.538 -3.238 1.00 0.00 C ATOM 478 CE LYS 60 48.462 32.685 -2.582 1.00 0.00 C ATOM 479 NZ LYS 60 49.485 32.885 -3.610 1.00 0.00 N ATOM 480 N THR 61 43.556 28.431 -3.265 1.00 0.00 N ATOM 481 CA THR 61 42.353 27.620 -3.182 1.00 0.00 C ATOM 482 C THR 61 41.901 27.539 -1.737 1.00 0.00 C ATOM 483 O THR 61 42.712 27.628 -0.818 1.00 0.00 O ATOM 484 CB THR 61 42.646 26.243 -3.789 1.00 0.00 C ATOM 485 CG2 THR 61 42.422 26.254 -5.300 1.00 0.00 C ATOM 486 OG1 THR 61 44.002 25.843 -3.522 1.00 0.00 O ATOM 487 N LYS 62 40.582 27.403 -1.569 1.00 0.00 N ATOM 488 CA LYS 62 40.071 27.331 -0.203 1.00 0.00 C ATOM 489 C LYS 62 38.761 26.578 -0.181 1.00 0.00 C ATOM 490 O LYS 62 38.080 26.507 -1.195 1.00 0.00 O ATOM 491 CB LYS 62 39.972 28.746 0.411 1.00 0.00 C ATOM 492 CG LYS 62 39.009 29.745 -0.245 1.00 0.00 C ATOM 493 CD LYS 62 37.598 29.728 0.355 1.00 0.00 C ATOM 494 CE LYS 62 37.531 30.192 1.822 1.00 0.00 C ATOM 495 NZ LYS 62 37.768 31.635 1.967 1.00 0.00 N ATOM 496 N ALA 63 38.419 26.015 0.980 1.00 0.00 N ATOM 497 CA ALA 63 37.070 25.468 1.033 1.00 0.00 C ATOM 498 C ALA 63 36.237 26.193 2.058 1.00 0.00 C ATOM 499 O ALA 63 36.646 26.439 3.192 1.00 0.00 O ATOM 500 CB ALA 63 37.050 23.966 1.327 1.00 0.00 C ATOM 501 N THR 64 35.049 26.551 1.567 1.00 0.00 N ATOM 502 CA THR 64 34.077 27.192 2.440 1.00 0.00 C ATOM 503 C THR 64 33.394 26.183 3.342 1.00 0.00 C ATOM 504 O THR 64 32.968 25.116 2.905 1.00 0.00 O ATOM 505 CB THR 64 33.060 27.993 1.609 1.00 0.00 C ATOM 506 CG2 THR 64 33.707 29.234 1.000 1.00 0.00 C ATOM 507 OG1 THR 64 32.461 27.198 0.570 1.00 0.00 O ATOM 508 N ILE 65 33.331 26.562 4.622 1.00 0.00 N ATOM 509 CA ILE 65 32.575 25.734 5.552 1.00 0.00 C ATOM 510 C ILE 65 31.428 26.543 6.122 1.00 0.00 C ATOM 511 O ILE 65 31.607 27.384 6.999 1.00 0.00 O ATOM 512 CB ILE 65 33.487 25.207 6.668 1.00 0.00 C ATOM 513 CG1 ILE 65 34.678 24.445 6.074 1.00 0.00 C ATOM 514 CG2 ILE 65 32.683 24.334 7.642 1.00 0.00 C ATOM 515 CD1 ILE 65 35.655 23.912 7.120 1.00 0.00 C ATOM 516 N ASN 66 30.244 26.275 5.570 1.00 0.00 N ATOM 517 CA ASN 66 29.096 26.992 6.118 1.00 0.00 C ATOM 518 C ASN 66 28.375 26.137 7.141 1.00 0.00 C ATOM 519 O ASN 66 28.356 24.914 7.046 1.00 0.00 O ATOM 520 CB ASN 66 28.165 27.453 4.991 1.00 0.00 C ATOM 521 CG ASN 66 27.144 28.446 5.514 1.00 0.00 C ATOM 522 ND2 ASN 66 25.996 28.447 4.840 1.00 0.00 N ATOM 523 OD1 ASN 66 27.376 29.175 6.476 1.00 0.00 O ATOM 524 N ILE 67 27.813 26.818 8.141 1.00 0.00 N ATOM 525 CA ILE 67 27.160 26.047 9.192 1.00 0.00 C ATOM 526 C ILE 67 25.680 26.381 9.289 1.00 0.00 C ATOM 527 O ILE 67 25.269 27.536 9.195 1.00 0.00 O ATOM 528 CB ILE 67 27.943 26.225 10.509 1.00 0.00 C ATOM 529 CG1 ILE 67 27.534 25.229 11.593 1.00 0.00 C ATOM 530 CG2 ILE 67 27.868 27.669 11.027 1.00 0.00 C ATOM 531 CD1 ILE 67 28.485 25.269 12.792 1.00 0.00 C ATOM 532 N ASP 68 24.889 25.317 9.433 1.00 0.00 N ATOM 533 CA ASP 68 23.449 25.548 9.472 1.00 0.00 C ATOM 534 C ASP 68 22.864 25.313 10.844 1.00 0.00 C ATOM 535 O ASP 68 23.181 24.324 11.508 1.00 0.00 O ATOM 536 CB ASP 68 22.730 24.688 8.425 1.00 0.00 C ATOM 537 CG ASP 68 22.140 25.544 7.314 1.00 0.00 C ATOM 538 OD1 ASP 68 21.407 26.492 7.599 1.00 0.00 O ATOM 539 OD2 ASP 68 22.393 25.264 6.142 1.00 0.00 O ATOM 540 N ALA 69 21.991 26.281 11.191 1.00 0.00 N ATOM 541 CA ALA 69 21.260 26.450 12.455 1.00 0.00 C ATOM 542 C ALA 69 21.994 27.331 13.457 1.00 0.00 C ATOM 543 O ALA 69 23.038 27.907 13.156 1.00 0.00 O ATOM 544 CB ALA 69 20.808 25.126 13.097 1.00 0.00 C ATOM 545 N ILE 70 21.385 27.455 14.652 1.00 0.00 N ATOM 546 CA ILE 70 21.981 28.309 15.687 1.00 0.00 C ATOM 547 C ILE 70 23.324 27.763 16.164 1.00 0.00 C ATOM 548 O ILE 70 24.338 28.454 16.261 1.00 0.00 O ATOM 549 CB ILE 70 21.001 28.487 16.868 1.00 0.00 C ATOM 550 CG1 ILE 70 19.609 28.942 16.411 1.00 0.00 C ATOM 551 CG2 ILE 70 21.562 29.464 17.912 1.00 0.00 C ATOM 552 CD1 ILE 70 19.579 30.329 15.762 1.00 0.00 C ATOM 553 N SER 71 23.274 26.460 16.431 1.00 0.00 N ATOM 554 CA SER 71 24.517 25.727 16.617 1.00 0.00 C ATOM 555 C SER 71 24.673 24.765 15.448 1.00 0.00 C ATOM 556 O SER 71 23.869 24.796 14.522 1.00 0.00 O ATOM 557 CB SER 71 24.486 25.031 17.982 1.00 0.00 C ATOM 558 OG SER 71 24.183 25.996 19.006 1.00 0.00 O ATOM 559 N GLY 72 25.714 23.921 15.501 1.00 0.00 N ATOM 560 CA GLY 72 25.907 23.026 14.365 1.00 0.00 C ATOM 561 C GLY 72 24.923 21.875 14.284 1.00 0.00 C ATOM 562 O GLY 72 25.152 20.790 14.816 1.00 0.00 O ATOM 563 N PHE 73 23.822 22.147 13.575 1.00 0.00 N ATOM 564 CA PHE 73 22.966 21.020 13.219 1.00 0.00 C ATOM 565 C PHE 73 23.470 20.353 11.952 1.00 0.00 C ATOM 566 O PHE 73 23.662 19.142 11.873 1.00 0.00 O ATOM 567 CB PHE 73 21.505 21.475 13.087 1.00 0.00 C ATOM 568 CG PHE 73 20.569 20.294 12.957 1.00 0.00 C ATOM 569 CD1 PHE 73 20.125 19.630 14.122 1.00 0.00 C ATOM 570 CD2 PHE 73 20.149 19.875 11.675 1.00 0.00 C ATOM 571 CE1 PHE 73 19.254 18.530 14.005 1.00 0.00 C ATOM 572 CE2 PHE 73 19.280 18.774 11.556 1.00 0.00 C ATOM 573 CZ PHE 73 18.842 18.111 12.723 1.00 0.00 C ATOM 574 N ALA 74 23.698 21.220 10.962 1.00 0.00 N ATOM 575 CA ALA 74 24.261 20.702 9.724 1.00 0.00 C ATOM 576 C ALA 74 25.478 21.512 9.335 1.00 0.00 C ATOM 577 O ALA 74 25.736 22.580 9.879 1.00 0.00 O ATOM 578 CB ALA 74 23.225 20.753 8.597 1.00 0.00 C ATOM 579 N TYR 75 26.212 20.957 8.369 1.00 0.00 N ATOM 580 CA TYR 75 27.356 21.683 7.829 1.00 0.00 C ATOM 581 C TYR 75 27.471 21.395 6.350 1.00 0.00 C ATOM 582 O TYR 75 27.121 20.309 5.891 1.00 0.00 O ATOM 583 CB TYR 75 28.657 21.340 8.585 1.00 0.00 C ATOM 584 CG TYR 75 28.774 19.861 8.905 1.00 0.00 C ATOM 585 CD1 TYR 75 29.101 18.943 7.884 1.00 0.00 C ATOM 586 CD2 TYR 75 28.550 19.440 10.233 1.00 0.00 C ATOM 587 CE1 TYR 75 29.186 17.574 8.194 1.00 0.00 C ATOM 588 CE2 TYR 75 28.636 18.072 10.542 1.00 0.00 C ATOM 589 CZ TYR 75 28.945 17.154 9.518 1.00 0.00 C ATOM 590 OH TYR 75 29.008 15.806 9.826 1.00 0.00 H ATOM 591 N GLU 76 27.958 22.397 5.620 1.00 0.00 N ATOM 592 CA GLU 76 28.215 22.130 4.213 1.00 0.00 C ATOM 593 C GLU 76 29.581 22.624 3.804 1.00 0.00 C ATOM 594 O GLU 76 30.110 23.593 4.338 1.00 0.00 O ATOM 595 CB GLU 76 27.105 22.675 3.299 1.00 0.00 C ATOM 596 CG GLU 76 26.851 24.188 3.362 1.00 0.00 C ATOM 597 CD GLU 76 25.814 24.620 2.331 1.00 0.00 C ATOM 598 OE1 GLU 76 24.969 23.817 1.928 1.00 0.00 O ATOM 599 OE2 GLU 76 25.838 25.778 1.911 1.00 0.00 O ATOM 600 N TYR 77 30.139 21.872 2.851 1.00 0.00 N ATOM 601 CA TYR 77 31.471 22.220 2.376 1.00 0.00 C ATOM 602 C TYR 77 31.418 22.479 0.889 1.00 0.00 C ATOM 603 O TYR 77 30.782 21.739 0.141 1.00 0.00 O ATOM 604 CB TYR 77 32.472 21.088 2.658 1.00 0.00 C ATOM 605 CG TYR 77 32.434 20.651 4.105 1.00 0.00 C ATOM 606 CD1 TYR 77 31.993 19.347 4.412 1.00 0.00 C ATOM 607 CD2 TYR 77 32.837 21.554 5.107 1.00 0.00 C ATOM 608 CE1 TYR 77 31.954 18.939 5.757 1.00 0.00 C ATOM 609 CE2 TYR 77 32.795 21.145 6.449 1.00 0.00 C ATOM 610 CZ TYR 77 32.356 19.846 6.759 1.00 0.00 C ATOM 611 OH TYR 77 32.326 19.463 8.087 1.00 0.00 H ATOM 612 N THR 78 32.103 23.546 0.478 1.00 0.00 N ATOM 613 CA THR 78 32.216 23.754 -0.961 1.00 0.00 C ATOM 614 C THR 78 33.569 24.333 -1.326 1.00 0.00 C ATOM 615 O THR 78 33.999 25.361 -0.812 1.00 0.00 O ATOM 616 CB THR 78 31.058 24.616 -1.486 1.00 0.00 C ATOM 617 CG2 THR 78 31.055 24.711 -3.017 1.00 0.00 C ATOM 618 OG1 THR 78 29.798 24.090 -1.025 1.00 0.00 O ATOM 619 N LEU 79 34.241 23.596 -2.216 1.00 0.00 N ATOM 620 CA LEU 79 35.552 24.066 -2.645 1.00 0.00 C ATOM 621 C LEU 79 35.436 25.235 -3.606 1.00 0.00 C ATOM 622 O LEU 79 34.622 25.226 -4.522 1.00 0.00 O ATOM 623 CB LEU 79 36.305 22.892 -3.275 1.00 0.00 C ATOM 624 CG LEU 79 37.787 23.121 -3.576 1.00 0.00 C ATOM 625 CD1 LEU 79 38.618 23.352 -2.313 1.00 0.00 C ATOM 626 CD2 LEU 79 38.350 21.975 -4.410 1.00 0.00 C ATOM 627 N GLU 80 36.286 26.230 -3.354 1.00 0.00 N ATOM 628 CA GLU 80 36.460 27.282 -4.344 1.00 0.00 C ATOM 629 C GLU 80 37.857 27.241 -4.926 1.00 0.00 C ATOM 630 O GLU 80 38.864 27.450 -4.254 1.00 0.00 O ATOM 631 CB GLU 80 36.159 28.675 -3.778 1.00 0.00 C ATOM 632 CG GLU 80 34.692 28.868 -3.361 1.00 0.00 C ATOM 633 CD GLU 80 34.378 30.328 -3.049 1.00 0.00 C ATOM 634 OE1 GLU 80 35.244 31.060 -2.566 1.00 0.00 O ATOM 635 OE2 GLU 80 33.247 30.756 -3.287 1.00 0.00 O ATOM 636 N ILE 81 37.873 26.944 -6.228 1.00 0.00 N ATOM 637 CA ILE 81 39.143 27.039 -6.934 1.00 0.00 C ATOM 638 C ILE 81 39.272 28.388 -7.617 1.00 0.00 C ATOM 639 O ILE 81 38.526 28.737 -8.522 1.00 0.00 O ATOM 640 CB ILE 81 39.392 25.855 -7.895 1.00 0.00 C ATOM 641 CG1 ILE 81 38.494 25.735 -9.140 1.00 0.00 C ATOM 642 CG2 ILE 81 39.391 24.553 -7.089 1.00 0.00 C ATOM 643 CD1 ILE 81 37.056 25.263 -8.905 1.00 0.00 C ATOM 644 N ASN 82 40.225 29.175 -7.092 1.00 0.00 N ATOM 645 CA ASN 82 40.438 30.542 -7.594 1.00 0.00 C ATOM 646 C ASN 82 39.206 31.428 -7.790 1.00 0.00 C ATOM 647 O ASN 82 39.139 32.271 -8.681 1.00 0.00 O ATOM 648 CB ASN 82 41.384 30.592 -8.818 1.00 0.00 C ATOM 649 CG ASN 82 40.862 29.877 -10.060 1.00 0.00 C ATOM 650 ND2 ASN 82 39.948 30.550 -10.760 1.00 0.00 N ATOM 651 OD1 ASN 82 41.311 28.787 -10.409 1.00 0.00 O ATOM 652 N GLY 83 38.231 31.216 -6.893 1.00 0.00 N ATOM 653 CA GLY 83 37.024 32.034 -6.984 1.00 0.00 C ATOM 654 C GLY 83 35.828 31.377 -7.658 1.00 0.00 C ATOM 655 O GLY 83 34.704 31.872 -7.601 1.00 0.00 O ATOM 656 N LYS 84 36.105 30.240 -8.304 1.00 0.00 N ATOM 657 CA LYS 84 35.013 29.463 -8.879 1.00 0.00 C ATOM 658 C LYS 84 34.570 28.398 -7.899 1.00 0.00 C ATOM 659 O LYS 84 35.388 27.812 -7.200 1.00 0.00 O ATOM 660 CB LYS 84 35.477 28.787 -10.167 1.00 0.00 C ATOM 661 CG LYS 84 36.017 29.753 -11.223 1.00 0.00 C ATOM 662 CD LYS 84 36.656 29.013 -12.400 1.00 0.00 C ATOM 663 CE LYS 84 35.686 28.056 -13.111 1.00 0.00 C ATOM 664 NZ LYS 84 36.358 27.334 -14.194 1.00 0.00 N ATOM 665 N SER 85 33.258 28.161 -7.868 1.00 0.00 N ATOM 666 CA SER 85 32.817 27.061 -7.019 1.00 0.00 C ATOM 667 C SER 85 32.924 25.713 -7.715 1.00 0.00 C ATOM 668 O SER 85 32.784 25.597 -8.932 1.00 0.00 O ATOM 669 CB SER 85 31.399 27.349 -6.514 1.00 0.00 C ATOM 670 OG SER 85 30.689 28.174 -7.458 1.00 0.00 O ATOM 671 N LEU 86 33.195 24.696 -6.897 1.00 0.00 N ATOM 672 CA LEU 86 33.293 23.365 -7.478 1.00 0.00 C ATOM 673 C LEU 86 32.133 22.482 -7.060 1.00 0.00 C ATOM 674 O LEU 86 31.613 22.569 -5.952 1.00 0.00 O ATOM 675 CB LEU 86 34.649 22.749 -7.119 1.00 0.00 C ATOM 676 CG LEU 86 35.057 21.555 -7.987 1.00 0.00 C ATOM 677 CD1 LEU 86 35.100 21.893 -9.479 1.00 0.00 C ATOM 678 CD2 LEU 86 36.381 20.968 -7.515 1.00 0.00 C ATOM 679 N LYS 87 31.733 21.636 -8.017 1.00 0.00 N ATOM 680 CA LYS 87 30.664 20.690 -7.715 1.00 0.00 C ATOM 681 C LYS 87 31.167 19.513 -6.901 1.00 0.00 C ATOM 682 O LYS 87 32.216 18.939 -7.180 1.00 0.00 O ATOM 683 CB LYS 87 30.032 20.190 -9.016 1.00 0.00 C ATOM 684 CG LYS 87 29.434 21.312 -9.872 1.00 0.00 C ATOM 685 CD LYS 87 29.024 20.839 -11.269 1.00 0.00 C ATOM 686 CE LYS 87 30.227 20.362 -12.103 1.00 0.00 C ATOM 687 NZ LYS 87 29.817 19.948 -13.446 1.00 0.00 N ATOM 688 N LYS 88 30.365 19.175 -5.885 1.00 0.00 N ATOM 689 CA LYS 88 30.644 17.931 -5.170 1.00 0.00 C ATOM 690 C LYS 88 30.180 16.749 -6.007 1.00 0.00 C ATOM 691 O LYS 88 29.262 16.882 -6.812 1.00 0.00 O ATOM 692 CB LYS 88 29.946 17.972 -3.805 1.00 0.00 C ATOM 693 CG LYS 88 30.446 16.953 -2.775 1.00 0.00 C ATOM 694 CD LYS 88 29.589 16.926 -1.508 1.00 0.00 C ATOM 695 CE LYS 88 29.540 18.276 -0.770 1.00 0.00 C ATOM 696 NZ LYS 88 28.656 18.196 0.397 1.00 0.00 N ATOM 697 N TYR 89 30.840 15.599 -5.801 1.00 0.00 N ATOM 698 CA TYR 89 30.464 14.420 -6.589 1.00 0.00 C ATOM 699 C TYR 89 29.004 13.989 -6.446 1.00 0.00 C ATOM 700 O TYR 89 28.302 13.789 -7.437 1.00 0.00 O ATOM 701 CB TYR 89 31.446 13.276 -6.288 1.00 0.00 C ATOM 702 CG TYR 89 31.196 12.061 -7.157 1.00 0.00 C ATOM 703 CD1 TYR 89 30.646 10.908 -6.561 1.00 0.00 C ATOM 704 CD2 TYR 89 31.515 12.108 -8.530 1.00 0.00 C ATOM 705 CE1 TYR 89 30.403 9.777 -7.357 1.00 0.00 C ATOM 706 CE2 TYR 89 31.272 10.977 -9.326 1.00 0.00 C ATOM 707 CZ TYR 89 30.717 9.825 -8.731 1.00 0.00 C ATOM 708 OH TYR 89 30.478 8.713 -9.525 1.00 0.00 H ATOM 709 N MET 90 28.608 13.880 -5.161 1.00 0.00 N ATOM 710 CA MET 90 27.261 13.476 -4.738 1.00 0.00 C ATOM 711 C MET 90 26.912 12.008 -5.007 1.00 0.00 C ATOM 712 CB MET 90 26.189 14.478 -5.217 1.00 0.00 C ATOM 713 CG MET 90 24.839 14.386 -4.492 1.00 0.00 C ATOM 714 SD MET 90 24.949 14.739 -2.730 1.00 0.00 S ATOM 715 CE MET 90 23.220 14.459 -2.316 1.00 0.00 C ATOM 716 1OCT MET 90 27.270 11.157 -4.191 1.00 0.00 O ATOM 717 2OCT MET 90 26.279 11.687 -6.018 1.00 0.00 O TER 718 OCT 90 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 617 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.92 62.0 150 84.3 178 ARMSMC SECONDARY STRUCTURE . . 48.60 72.4 105 89.0 118 ARMSMC SURFACE . . . . . . . . 69.58 54.7 95 88.0 108 ARMSMC BURIED . . . . . . . . 41.92 74.5 55 78.6 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.81 31.2 64 85.3 75 ARMSSC1 RELIABLE SIDE CHAINS . 87.75 34.5 58 87.9 66 ARMSSC1 SECONDARY STRUCTURE . . 85.91 34.8 46 88.5 52 ARMSSC1 SURFACE . . . . . . . . 94.70 23.1 39 88.6 44 ARMSSC1 BURIED . . . . . . . . 84.37 44.0 25 80.6 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.22 48.0 50 90.9 55 ARMSSC2 RELIABLE SIDE CHAINS . 69.62 51.2 41 89.1 46 ARMSSC2 SECONDARY STRUCTURE . . 71.13 52.8 36 92.3 39 ARMSSC2 SURFACE . . . . . . . . 76.38 48.4 31 93.9 33 ARMSSC2 BURIED . . . . . . . . 75.96 47.4 19 86.4 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.10 38.1 21 87.5 24 ARMSSC3 RELIABLE SIDE CHAINS . 82.10 38.1 21 87.5 24 ARMSSC3 SECONDARY STRUCTURE . . 87.43 26.7 15 88.2 17 ARMSSC3 SURFACE . . . . . . . . 89.76 29.4 17 94.4 18 ARMSSC3 BURIED . . . . . . . . 33.85 75.0 4 66.7 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 102.91 40.0 10 76.9 13 ARMSSC4 RELIABLE SIDE CHAINS . 102.91 40.0 10 76.9 13 ARMSSC4 SECONDARY STRUCTURE . . 115.04 25.0 8 80.0 10 ARMSSC4 SURFACE . . . . . . . . 102.91 40.0 10 90.9 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.32 (Number of atoms: 77) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.32 77 85.6 90 CRMSCA CRN = ALL/NP . . . . . 0.0690 CRMSCA SECONDARY STRUCTURE . . 3.83 53 89.8 59 CRMSCA SURFACE . . . . . . . . 5.94 49 89.1 55 CRMSCA BURIED . . . . . . . . 4.01 28 80.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.39 378 85.5 442 CRMSMC SECONDARY STRUCTURE . . 4.02 263 89.8 293 CRMSMC SURFACE . . . . . . . . 5.98 239 88.8 269 CRMSMC BURIED . . . . . . . . 4.18 139 80.3 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.46 310 87.1 356 CRMSSC RELIABLE SIDE CHAINS . 7.59 276 87.3 316 CRMSSC SECONDARY STRUCTURE . . 5.90 223 88.5 252 CRMSSC SURFACE . . . . . . . . 8.63 187 91.7 204 CRMSSC BURIED . . . . . . . . 5.18 123 80.9 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.43 617 86.2 716 CRMSALL SECONDARY STRUCTURE . . 5.02 435 89.1 488 CRMSALL SURFACE . . . . . . . . 7.30 382 90.1 424 CRMSALL BURIED . . . . . . . . 4.68 235 80.5 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.468 1.000 0.500 77 85.6 90 ERRCA SECONDARY STRUCTURE . . 3.281 1.000 0.500 53 89.8 59 ERRCA SURFACE . . . . . . . . 5.115 1.000 0.500 49 89.1 55 ERRCA BURIED . . . . . . . . 3.337 1.000 0.500 28 80.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.523 1.000 0.500 378 85.5 442 ERRMC SECONDARY STRUCTURE . . 3.408 1.000 0.500 263 89.8 293 ERRMC SURFACE . . . . . . . . 5.137 1.000 0.500 239 88.8 269 ERRMC BURIED . . . . . . . . 3.465 1.000 0.500 139 80.3 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.243 1.000 0.500 310 87.1 356 ERRSC RELIABLE SIDE CHAINS . 6.364 1.000 0.500 276 87.3 316 ERRSC SECONDARY STRUCTURE . . 4.929 1.000 0.500 223 88.5 252 ERRSC SURFACE . . . . . . . . 7.554 1.000 0.500 187 91.7 204 ERRSC BURIED . . . . . . . . 4.251 1.000 0.500 123 80.9 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.321 1.000 0.500 617 86.2 716 ERRALL SECONDARY STRUCTURE . . 4.138 1.000 0.500 435 89.1 488 ERRALL SURFACE . . . . . . . . 6.234 1.000 0.500 382 90.1 424 ERRALL BURIED . . . . . . . . 3.838 1.000 0.500 235 80.5 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 23 30 44 72 77 90 DISTCA CA (P) 3.33 25.56 33.33 48.89 80.00 90 DISTCA CA (RMS) 0.73 1.39 1.75 2.70 4.75 DISTCA ALL (N) 22 149 216 310 550 617 716 DISTALL ALL (P) 3.07 20.81 30.17 43.30 76.82 716 DISTALL ALL (RMS) 0.79 1.40 1.84 2.72 5.17 DISTALL END of the results output