####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS402_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS402_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.47 4.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 2 - 23 1.85 7.09 LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 1.91 7.20 LONGEST_CONTINUOUS_SEGMENT: 22 4 - 25 1.93 7.79 LCS_AVERAGE: 19.32 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 74 - 88 0.95 5.91 LCS_AVERAGE: 8.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 90 3 3 3 4 5 8 10 12 16 19 20 21 60 68 69 74 76 80 83 85 LCS_GDT T 2 T 2 3 22 90 3 3 11 14 21 29 36 57 63 67 72 74 77 80 82 85 87 89 89 89 LCS_GDT D 3 D 3 4 22 90 4 4 11 15 36 43 54 63 69 70 73 77 79 81 84 86 87 89 89 89 LCS_GDT L 4 L 4 4 22 90 4 4 6 13 25 45 58 65 69 70 75 77 80 82 84 86 87 89 89 89 LCS_GDT V 5 V 5 9 22 90 4 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 6 A 6 9 22 90 8 13 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 7 V 7 9 22 90 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT W 8 W 8 9 22 90 8 13 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT D 9 D 9 9 22 90 8 13 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 10 V 10 9 22 90 5 13 23 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 11 A 11 9 22 90 4 12 20 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT L 12 L 12 9 22 90 3 10 17 24 36 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT S 13 S 13 9 22 90 3 10 17 24 36 50 62 67 70 72 75 78 80 82 84 86 87 89 89 89 LCS_GDT D 14 D 14 6 22 90 3 10 18 28 42 51 61 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 15 G 15 8 22 90 4 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 16 V 16 8 22 90 3 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT H 17 H 17 8 22 90 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 18 K 18 8 22 90 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 19 I 19 8 22 90 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 20 E 20 8 22 90 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT F 21 F 21 8 22 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 22 E 22 8 22 90 4 13 24 32 42 54 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT H 23 H 23 8 22 90 4 13 24 32 37 50 61 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 24 G 24 8 22 90 1 7 11 16 25 33 45 53 69 72 75 77 80 82 84 86 87 89 89 89 LCS_GDT T 25 T 25 3 22 90 3 4 5 6 10 24 41 54 64 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT T 26 T 26 3 6 90 3 3 4 4 7 16 33 55 68 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT S 27 S 27 6 16 90 3 8 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 28 G 28 8 16 90 5 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 29 K 29 10 16 90 3 10 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT R 30 R 30 10 16 90 4 8 17 28 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 31 V 31 10 16 90 3 5 12 24 40 52 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 32 V 32 10 16 90 4 10 19 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT Y 33 Y 33 10 16 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 34 V 34 10 16 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT D 35 D 35 10 16 90 5 11 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 36 G 36 10 16 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 37 K 37 10 16 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 38 E 38 10 16 90 5 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 39 E 39 5 16 90 3 3 10 27 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 40 I 40 3 16 90 3 8 19 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT R 41 R 41 3 16 90 3 5 17 28 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 42 K 42 3 16 90 3 3 13 25 37 50 59 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 43 E 43 3 4 90 3 3 4 4 5 6 9 21 36 52 63 75 80 82 84 86 87 89 89 89 LCS_GDT W 44 W 44 3 4 90 3 3 4 4 4 7 9 13 14 18 42 53 59 74 81 85 86 89 89 89 LCS_GDT M 45 M 45 3 6 90 3 3 5 6 8 13 26 42 59 69 75 77 80 82 84 86 87 89 89 89 LCS_GDT F 46 F 46 3 6 90 3 3 5 6 8 9 14 23 30 47 60 75 78 82 84 86 87 89 89 89 LCS_GDT K 47 K 47 4 6 90 3 4 5 6 8 9 19 41 49 57 69 75 78 82 84 86 87 89 89 89 LCS_GDT L 48 L 48 4 6 90 3 4 4 9 21 36 48 59 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 49 V 49 4 6 90 3 4 5 7 15 21 37 55 65 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 50 G 50 4 20 90 3 4 12 21 37 54 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 51 K 51 4 20 90 3 4 7 14 34 43 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 52 E 52 5 20 90 3 7 12 28 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT T 53 T 53 5 20 90 4 9 17 32 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT F 54 F 54 5 20 90 4 9 17 32 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT Y 55 Y 55 5 20 90 4 9 13 32 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT V 56 V 56 5 20 90 4 9 13 32 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 57 G 57 5 20 90 0 3 10 13 25 31 45 58 67 72 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 58 A 58 5 20 90 4 8 11 18 33 47 59 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 59 A 59 5 20 90 4 4 24 32 37 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 60 K 60 5 20 90 4 5 7 20 33 44 58 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT T 61 T 61 7 20 90 4 8 24 32 41 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 62 K 62 7 20 90 3 13 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 63 A 63 7 20 90 3 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT T 64 T 64 7 20 90 5 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 65 I 65 7 20 90 4 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT N 66 N 66 7 20 90 4 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 67 I 67 7 20 90 3 17 24 32 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT D 68 D 68 7 20 90 3 9 18 32 42 54 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 69 A 69 4 20 90 3 3 4 17 29 42 56 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 70 I 70 4 10 90 3 3 4 8 13 20 30 38 55 64 73 78 80 82 84 86 87 89 89 89 LCS_GDT S 71 S 71 4 12 90 3 3 6 9 17 22 31 48 59 64 74 78 80 82 84 86 87 89 89 89 LCS_GDT G 72 G 72 3 17 90 0 3 5 10 14 31 49 62 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT F 73 F 73 4 17 90 3 5 12 15 16 32 55 64 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT A 74 A 74 15 17 90 3 10 14 22 41 52 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT Y 75 Y 75 15 17 90 5 8 14 15 28 52 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 76 E 76 15 17 90 6 11 14 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT Y 77 Y 77 15 17 90 6 11 14 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT T 78 T 78 15 17 90 6 11 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT L 79 L 79 15 17 90 6 11 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT E 80 E 80 15 17 90 6 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT I 81 I 81 15 17 90 5 11 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT N 82 N 82 15 17 90 6 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT G 83 G 83 15 17 90 5 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 84 K 84 15 17 90 5 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT S 85 S 85 15 17 90 4 12 21 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT L 86 L 86 15 17 90 4 11 18 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 87 K 87 15 17 90 4 11 14 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT K 88 K 88 15 17 90 3 9 16 28 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 LCS_GDT Y 89 Y 89 3 17 90 0 3 4 4 7 8 16 20 23 65 68 73 75 79 83 83 87 89 89 89 LCS_GDT M 90 M 90 3 6 90 0 3 4 6 8 10 25 49 61 65 69 73 79 80 84 86 87 89 89 89 LCS_AVERAGE LCS_A: 42.65 ( 8.62 19.32 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 17 24 33 44 55 62 67 70 73 75 78 80 82 84 86 87 89 89 89 GDT PERCENT_AT 8.89 18.89 26.67 36.67 48.89 61.11 68.89 74.44 77.78 81.11 83.33 86.67 88.89 91.11 93.33 95.56 96.67 98.89 98.89 98.89 GDT RMS_LOCAL 0.29 0.77 0.99 1.44 1.78 2.13 2.29 2.45 2.62 2.94 3.05 3.33 3.41 3.63 3.76 3.90 3.99 4.20 4.20 4.20 GDT RMS_ALL_AT 5.82 4.92 4.97 4.73 4.64 4.74 4.68 4.66 4.59 4.52 4.49 4.53 4.51 4.52 4.52 4.49 4.48 4.48 4.48 4.48 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: D 35 D 35 # possible swapping detected: E 38 E 38 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 13.871 0 0.066 0.633 17.677 0.000 0.000 LGA T 2 T 2 7.455 0 0.053 0.125 10.603 20.476 12.109 LGA D 3 D 3 5.229 0 0.457 0.415 6.689 22.976 27.976 LGA L 4 L 4 4.809 0 0.156 1.355 10.950 46.190 24.940 LGA V 5 V 5 1.521 0 0.502 0.924 6.218 75.000 53.673 LGA A 6 A 6 0.984 0 0.126 0.164 1.378 90.476 88.667 LGA V 7 V 7 1.033 0 0.162 0.155 1.165 83.690 82.721 LGA W 8 W 8 1.699 0 0.012 0.147 2.627 77.143 68.946 LGA D 9 D 9 2.036 0 0.056 0.867 3.459 64.881 60.179 LGA V 10 V 10 1.659 0 0.183 1.158 3.016 70.833 67.279 LGA A 11 A 11 1.429 0 0.245 0.247 2.048 75.119 76.381 LGA L 12 L 12 3.126 0 0.281 1.129 6.151 57.262 47.024 LGA S 13 S 13 3.633 0 0.568 0.846 4.800 43.452 40.397 LGA D 14 D 14 3.866 0 0.173 1.186 7.451 48.452 31.667 LGA G 15 G 15 2.348 0 0.152 0.152 2.543 62.857 62.857 LGA V 16 V 16 2.248 0 0.268 1.186 4.227 61.071 57.619 LGA H 17 H 17 0.984 0 0.332 0.381 1.513 81.548 85.095 LGA K 18 K 18 1.545 0 0.089 0.589 3.039 72.976 65.926 LGA I 19 I 19 0.988 0 0.132 0.160 1.786 90.476 83.810 LGA E 20 E 20 1.443 0 0.030 0.620 4.758 75.000 58.095 LGA F 21 F 21 1.596 0 0.136 0.274 2.969 75.000 69.351 LGA E 22 E 22 2.915 0 0.185 0.677 5.521 52.262 43.122 LGA H 23 H 23 3.584 0 0.527 1.279 6.090 43.452 34.048 LGA G 24 G 24 6.246 0 0.615 0.615 8.168 14.167 14.167 LGA T 25 T 25 8.152 0 0.506 0.422 11.203 4.881 2.789 LGA T 26 T 26 7.348 0 0.593 0.644 10.984 18.929 11.224 LGA S 27 S 27 2.089 0 0.432 0.651 3.994 63.452 63.968 LGA G 28 G 28 1.788 0 0.131 0.131 2.151 68.810 68.810 LGA K 29 K 29 2.661 0 0.060 1.229 9.281 69.048 46.561 LGA R 30 R 30 2.512 0 0.252 1.293 7.973 45.952 33.896 LGA V 31 V 31 3.410 0 0.211 0.988 5.178 57.262 47.959 LGA V 32 V 32 1.975 0 0.041 0.091 3.354 68.810 61.769 LGA Y 33 Y 33 0.886 0 0.093 0.569 3.474 81.548 72.222 LGA V 34 V 34 1.308 0 0.099 1.080 3.975 85.952 77.483 LGA D 35 D 35 0.851 0 0.128 0.148 1.317 90.476 87.083 LGA G 36 G 36 0.876 0 0.053 0.053 0.876 90.476 90.476 LGA K 37 K 37 0.734 0 0.172 0.937 3.413 86.071 74.603 LGA E 38 E 38 0.971 0 0.603 0.892 3.349 78.095 70.847 LGA E 39 E 39 2.241 0 0.057 0.829 4.095 75.119 62.963 LGA I 40 I 40 2.559 0 0.667 1.065 6.627 59.286 44.048 LGA R 41 R 41 2.702 0 0.516 1.303 4.161 57.143 52.857 LGA K 42 K 42 4.728 0 0.553 1.037 11.725 29.405 16.138 LGA E 43 E 43 9.436 0 0.187 1.201 16.821 2.976 1.323 LGA W 44 W 44 10.867 0 0.579 0.911 21.210 1.548 0.442 LGA M 45 M 45 7.239 0 0.587 0.994 9.741 6.786 9.464 LGA F 46 F 46 10.524 0 0.114 1.267 15.892 0.357 0.130 LGA K 47 K 47 9.759 0 0.662 1.010 11.093 3.929 1.799 LGA L 48 L 48 6.788 0 0.070 1.351 8.209 16.667 14.821 LGA V 49 V 49 7.267 0 0.439 1.418 10.344 27.143 15.782 LGA G 50 G 50 3.060 0 0.417 0.417 4.948 45.357 45.357 LGA K 51 K 51 3.621 0 0.285 0.618 4.308 55.833 56.138 LGA E 52 E 52 2.933 0 0.250 1.045 6.749 55.357 37.989 LGA T 53 T 53 2.692 0 0.023 0.544 4.164 57.143 55.374 LGA F 54 F 54 2.809 0 0.150 0.274 2.876 59.048 62.727 LGA Y 55 Y 55 3.108 0 0.025 1.419 5.648 53.571 59.286 LGA V 56 V 56 2.686 0 0.221 0.217 3.403 53.571 58.367 LGA G 57 G 57 5.625 0 0.374 0.374 5.625 30.357 30.357 LGA A 58 A 58 3.860 0 0.638 0.595 5.286 37.500 38.667 LGA A 59 A 59 2.994 0 0.125 0.133 4.042 55.357 51.714 LGA K 60 K 60 4.120 0 0.134 0.804 12.987 43.452 23.757 LGA T 61 T 61 2.720 0 0.065 1.017 5.305 67.143 61.905 LGA K 62 K 62 2.171 0 0.022 0.577 4.489 62.857 53.651 LGA A 63 A 63 1.904 0 0.070 0.063 2.144 70.833 69.619 LGA T 64 T 64 1.642 0 0.138 0.156 2.685 72.857 67.211 LGA I 65 I 65 1.416 0 0.151 0.176 1.847 77.143 76.071 LGA N 66 N 66 1.743 0 0.232 0.667 2.327 72.857 71.845 LGA I 67 I 67 2.181 0 0.321 0.746 4.476 55.952 54.048 LGA D 68 D 68 3.143 0 0.306 0.357 3.563 52.024 50.179 LGA A 69 A 69 5.641 0 0.278 0.388 7.309 18.214 16.571 LGA I 70 I 70 10.219 0 0.113 0.133 11.425 2.024 1.190 LGA S 71 S 71 10.668 0 0.572 0.731 10.968 0.119 0.079 LGA G 72 G 72 7.866 0 0.656 0.656 8.520 8.333 8.333 LGA F 73 F 73 5.650 0 0.497 0.996 11.563 35.833 15.455 LGA A 74 A 74 3.200 0 0.464 0.519 4.715 43.571 41.143 LGA Y 75 Y 75 3.483 0 0.055 0.442 11.631 61.190 25.952 LGA E 76 E 76 2.495 0 0.379 0.633 4.730 57.262 50.582 LGA Y 77 Y 77 2.472 0 0.073 0.315 5.505 64.762 48.333 LGA T 78 T 78 2.305 0 0.093 0.565 3.210 62.857 63.946 LGA L 79 L 79 2.279 0 0.071 0.193 2.543 64.762 63.810 LGA E 80 E 80 2.380 0 0.079 0.632 4.812 62.857 56.032 LGA I 81 I 81 2.546 0 0.085 0.650 2.934 60.952 63.036 LGA N 82 N 82 2.614 0 0.073 0.274 3.475 60.952 60.060 LGA G 83 G 83 2.722 0 0.063 0.063 2.722 59.048 59.048 LGA K 84 K 84 2.150 0 0.117 1.071 3.860 68.810 62.910 LGA S 85 S 85 1.873 0 0.158 0.533 2.173 66.786 71.746 LGA L 86 L 86 2.686 0 0.120 1.392 6.894 59.048 43.988 LGA K 87 K 87 2.775 0 0.145 1.000 3.219 55.357 61.852 LGA K 88 K 88 2.991 0 0.620 0.926 10.534 41.310 25.450 LGA Y 89 Y 89 8.509 0 0.525 1.219 16.194 8.571 2.857 LGA M 90 M 90 7.540 0 0.660 1.435 10.272 3.095 10.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.466 4.345 5.599 51.542 46.246 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 67 2.45 56.389 50.761 2.630 LGA_LOCAL RMSD: 2.448 Number of atoms: 67 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.656 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.466 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.443507 * X + 0.891820 * Y + -0.089210 * Z + 25.950354 Y_new = 0.588576 * X + 0.364867 * Y + 0.721422 * Z + 8.580814 Z_new = 0.675929 * X + 0.267449 * Y + -0.686725 * Z + 7.810048 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.216550 -0.742225 2.770209 [DEG: 126.9989 -42.5263 158.7213 ] ZXZ: -3.018558 2.327770 1.194023 [DEG: -172.9506 133.3714 68.4125 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS402_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS402_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 67 2.45 50.761 4.47 REMARK ---------------------------------------------------------- MOLECULE T0540TS402_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REFINED REMARK PARENT 2kd2_A 3a57_A 2iwa_A 1qwi_A 1smp_I ATOM 1 N MET 1 24.860 7.896 9.497 1.00 0.50 N ATOM 2 CA MET 1 24.903 7.835 8.040 1.00 0.50 C ATOM 3 C MET 1 26.252 8.300 7.509 1.00 0.50 C ATOM 4 O MET 1 26.382 9.415 7.007 1.00 0.50 O ATOM 5 CB MET 1 23.783 8.687 7.435 1.00 0.50 C ATOM 6 CG MET 1 23.732 8.629 5.914 1.00 0.50 C ATOM 7 SD MET 1 22.385 9.628 5.236 1.00 0.50 S ATOM 8 CE MET 1 23.016 11.276 5.527 1.00 0.50 C ATOM 20 N THR 2 27.256 7.436 7.623 1.00 0.50 N ATOM 21 CA THR 2 28.599 7.756 7.155 1.00 0.50 C ATOM 22 C THR 2 29.284 8.750 8.084 1.00 0.50 C ATOM 23 O THR 2 30.501 8.932 8.026 1.00 0.50 O ATOM 24 CB THR 2 28.565 8.337 5.723 1.00 0.50 C ATOM 25 OG1 THR 2 27.859 9.584 5.748 1.00 0.50 O ATOM 26 CG2 THR 2 27.869 7.385 4.760 1.00 0.50 C ATOM 34 N ASP 3 28.497 9.393 8.939 1.00 0.50 N ATOM 35 CA ASP 3 29.027 10.371 9.882 1.00 0.50 C ATOM 36 C ASP 3 29.303 11.704 9.197 1.00 0.50 C ATOM 37 O ASP 3 28.652 12.708 9.488 1.00 0.50 O ATOM 38 CB ASP 3 30.309 9.843 10.535 1.00 0.50 C ATOM 39 CG ASP 3 30.066 8.658 11.450 1.00 0.50 C ATOM 40 OD1 ASP 3 29.043 8.635 12.168 1.00 0.50 O ATOM 41 OD2 ASP 3 30.914 7.737 11.454 1.00 0.50 O ATOM 46 N LEU 4 30.271 11.707 8.287 1.00 0.50 N ATOM 47 CA LEU 4 30.634 12.916 7.559 1.00 0.50 C ATOM 48 C LEU 4 31.692 12.626 6.503 1.00 0.50 C ATOM 49 O LEU 4 32.890 12.658 6.784 1.00 0.50 O ATOM 50 CB LEU 4 31.152 13.984 8.530 1.00 0.50 C ATOM 51 CG LEU 4 30.130 14.556 9.516 1.00 0.50 C ATOM 52 CD1 LEU 4 30.840 15.336 10.615 1.00 0.50 C ATOM 53 CD2 LEU 4 29.139 15.450 8.784 1.00 0.50 C ATOM 65 N VAL 5 31.243 12.342 5.285 1.00 0.50 N ATOM 66 CA VAL 5 32.150 12.045 4.184 1.00 0.50 C ATOM 67 C VAL 5 31.901 12.970 3.000 1.00 0.50 C ATOM 68 O VAL 5 31.117 12.653 2.105 1.00 0.50 O ATOM 69 CB VAL 5 32.012 10.576 3.724 1.00 0.50 C ATOM 70 CG1 VAL 5 33.085 10.227 2.699 1.00 0.50 C ATOM 71 CG2 VAL 5 32.100 9.634 4.920 1.00 0.50 C ATOM 81 N ALA 6 32.570 14.119 3.001 1.00 0.50 N ATOM 82 CA ALA 6 32.422 15.093 1.927 1.00 0.50 C ATOM 83 C ALA 6 33.593 15.025 0.956 1.00 0.50 C ATOM 84 O ALA 6 34.724 15.361 1.307 1.00 0.50 O ATOM 85 CB ALA 6 32.304 16.500 2.504 1.00 0.50 C ATOM 91 N VAL 7 33.316 14.584 -0.267 1.00 0.50 N ATOM 92 CA VAL 7 34.346 14.470 -1.293 1.00 0.50 C ATOM 93 C VAL 7 34.203 15.565 -2.342 1.00 0.50 C ATOM 94 O VAL 7 33.262 15.558 -3.136 1.00 0.50 O ATOM 95 CB VAL 7 34.300 13.089 -1.983 1.00 0.50 C ATOM 96 CG1 VAL 7 35.377 12.986 -3.058 1.00 0.50 C ATOM 97 CG2 VAL 7 34.471 11.975 -0.957 1.00 0.50 C ATOM 107 N TRP 8 35.140 16.507 -2.339 1.00 0.50 N ATOM 108 CA TRP 8 35.119 17.611 -3.291 1.00 0.50 C ATOM 109 C TRP 8 36.134 17.395 -4.406 1.00 0.50 C ATOM 110 O TRP 8 37.275 17.007 -4.154 1.00 0.50 O ATOM 111 CB TRP 8 35.404 18.939 -2.577 1.00 0.50 C ATOM 112 CG TRP 8 34.423 19.267 -1.490 1.00 0.50 C ATOM 113 CD1 TRP 8 33.162 19.775 -1.647 1.00 0.50 C ATOM 114 CD2 TRP 8 34.625 19.111 -0.081 1.00 0.50 C ATOM 115 NE1 TRP 8 32.569 19.944 -0.418 1.00 0.50 N ATOM 116 CE2 TRP 8 33.443 19.545 0.557 1.00 0.50 C ATOM 117 CE3 TRP 8 35.689 18.647 0.701 1.00 0.50 C ATOM 118 CZ2 TRP 8 33.296 19.528 1.948 1.00 0.50 C ATOM 119 CZ3 TRP 8 35.543 18.630 2.083 1.00 0.50 C ATOM 120 CH2 TRP 8 34.356 19.067 2.691 1.00 0.50 H ATOM 131 N ASP 9 35.712 17.649 -5.641 1.00 0.50 N ATOM 132 CA ASP 9 36.583 17.483 -6.798 1.00 0.50 C ATOM 133 C ASP 9 37.027 18.831 -7.351 1.00 0.50 C ATOM 134 O ASP 9 36.200 19.680 -7.681 1.00 0.50 O ATOM 135 CB ASP 9 35.872 16.677 -7.890 1.00 0.50 C ATOM 136 CG ASP 9 36.781 16.316 -9.050 1.00 0.50 C ATOM 137 OD1 ASP 9 38.020 16.376 -8.901 1.00 0.50 O ATOM 138 OD2 ASP 9 36.247 15.970 -10.128 1.00 0.50 O ATOM 143 N VAL 10 38.338 19.023 -7.448 1.00 0.50 N ATOM 144 CA VAL 10 38.895 20.269 -7.961 1.00 0.50 C ATOM 145 C VAL 10 40.125 20.010 -8.821 1.00 0.50 C ATOM 146 O VAL 10 41.060 19.331 -8.396 1.00 0.50 O ATOM 147 CB VAL 10 39.267 21.232 -6.812 1.00 0.50 C ATOM 148 CG1 VAL 10 40.287 20.591 -5.877 1.00 0.50 C ATOM 149 CG2 VAL 10 39.815 22.541 -7.372 1.00 0.50 C ATOM 159 N ALA 11 40.117 20.553 -10.034 1.00 0.50 N ATOM 160 CA ALA 11 41.233 20.382 -10.957 1.00 0.50 C ATOM 161 C ALA 11 42.363 21.353 -10.642 1.00 0.50 C ATOM 162 O ALA 11 42.492 22.398 -11.280 1.00 0.50 O ATOM 163 CB ALA 11 40.763 20.577 -12.396 1.00 0.50 C ATOM 169 N LEU 12 43.179 21.003 -9.653 1.00 0.50 N ATOM 170 CA LEU 12 44.301 21.844 -9.252 1.00 0.50 C ATOM 171 C LEU 12 45.078 22.341 -10.463 1.00 0.50 C ATOM 172 O LEU 12 44.552 23.092 -11.285 1.00 0.50 O ATOM 173 CB LEU 12 45.238 21.069 -8.319 1.00 0.50 C ATOM 174 CG LEU 12 45.930 21.885 -7.224 1.00 0.50 C ATOM 175 CD1 LEU 12 45.951 21.101 -5.919 1.00 0.50 C ATOM 176 CD2 LEU 12 47.348 22.242 -7.654 1.00 0.50 C ATOM 188 N SER 13 46.334 21.920 -10.567 1.00 0.50 N ATOM 189 CA SER 13 47.187 22.322 -11.679 1.00 0.50 C ATOM 190 C SER 13 47.218 21.254 -12.765 1.00 0.50 C ATOM 191 O SER 13 48.060 20.357 -12.743 1.00 0.50 O ATOM 192 CB SER 13 48.610 22.600 -11.186 1.00 0.50 C ATOM 193 OG SER 13 49.440 23.000 -12.263 1.00 0.50 O ATOM 199 N ASP 14 46.291 21.355 -13.713 1.00 0.50 N ATOM 200 CA ASP 14 46.210 20.397 -14.809 1.00 0.50 C ATOM 201 C ASP 14 46.162 18.967 -14.288 1.00 0.50 C ATOM 202 O ASP 14 46.857 18.087 -14.796 1.00 0.50 O ATOM 203 CB ASP 14 47.401 20.568 -15.758 1.00 0.50 C ATOM 204 CG ASP 14 47.427 21.921 -16.443 1.00 0.50 C ATOM 205 OD1 ASP 14 46.391 22.346 -16.999 1.00 0.50 O ATOM 206 OD2 ASP 14 48.500 22.566 -16.429 1.00 0.50 O ATOM 211 N GLY 15 45.335 18.740 -13.273 1.00 0.50 N ATOM 212 CA GLY 15 45.194 17.415 -12.681 1.00 0.50 C ATOM 213 C GLY 15 43.934 17.323 -11.830 1.00 0.50 C ATOM 214 O GLY 15 43.457 18.326 -11.301 1.00 0.50 O ATOM 218 N VAL 16 43.397 16.114 -11.705 1.00 0.50 N ATOM 219 CA VAL 16 42.190 15.888 -10.919 1.00 0.50 C ATOM 220 C VAL 16 42.497 15.887 -9.428 1.00 0.50 C ATOM 221 O VAL 16 42.863 14.857 -8.861 1.00 0.50 O ATOM 222 CB VAL 16 41.511 14.556 -11.305 1.00 0.50 C ATOM 223 CG1 VAL 16 40.177 14.399 -10.583 1.00 0.50 C ATOM 224 CG2 VAL 16 41.304 14.481 -12.814 1.00 0.50 C ATOM 234 N HIS 17 42.346 17.046 -8.796 1.00 0.50 N ATOM 235 CA HIS 17 42.607 17.180 -7.368 1.00 0.50 C ATOM 236 C HIS 17 41.363 16.857 -6.549 1.00 0.50 C ATOM 237 O HIS 17 40.620 17.754 -6.151 1.00 0.50 O ATOM 238 CB HIS 17 43.086 18.602 -7.044 1.00 0.50 C ATOM 239 CG HIS 17 44.424 18.924 -7.639 1.00 0.50 C ATOM 240 ND1 HIS 17 44.593 19.236 -8.970 1.00 0.50 N ATOM 241 CD2 HIS 17 45.653 18.980 -7.068 1.00 0.50 C ATOM 242 CE1 HIS 17 45.878 19.473 -9.194 1.00 0.50 C ATOM 243 NE2 HIS 17 46.541 19.325 -8.058 1.00 0.50 N ATOM 251 N LYS 18 41.143 15.570 -6.301 1.00 0.50 N ATOM 252 CA LYS 18 39.988 15.125 -5.529 1.00 0.50 C ATOM 253 C LYS 18 40.283 15.153 -4.034 1.00 0.50 C ATOM 254 O LYS 18 41.095 14.372 -3.537 1.00 0.50 O ATOM 255 CB LYS 18 39.575 13.713 -5.951 1.00 0.50 C ATOM 256 CG LYS 18 38.255 13.255 -5.350 1.00 0.50 C ATOM 257 CD LYS 18 37.914 11.832 -5.776 1.00 0.50 C ATOM 258 CE LYS 18 37.453 11.773 -7.227 1.00 0.50 C ATOM 259 NZ LYS 18 37.092 10.386 -7.635 1.00 0.50 N ATOM 273 N ILE 19 39.619 16.058 -3.322 1.00 0.50 N ATOM 274 CA ILE 19 39.809 16.188 -1.882 1.00 0.50 C ATOM 275 C ILE 19 38.638 15.587 -1.115 1.00 0.50 C ATOM 276 O ILE 19 37.530 16.127 -1.133 1.00 0.50 O ATOM 277 CB ILE 19 39.985 17.670 -1.473 1.00 0.50 C ATOM 278 CG1 ILE 19 41.077 18.330 -2.324 1.00 0.50 C ATOM 279 CG2 ILE 19 40.316 17.784 0.016 1.00 0.50 C ATOM 280 CD1 ILE 19 41.146 19.841 -2.167 1.00 0.50 C ATOM 292 N GLU 20 38.886 14.467 -0.446 1.00 0.50 N ATOM 293 CA GLU 20 37.852 13.791 0.328 1.00 0.50 C ATOM 294 C GLU 20 37.909 14.196 1.796 1.00 0.50 C ATOM 295 O GLU 20 38.985 14.452 2.338 1.00 0.50 O ATOM 296 CB GLU 20 37.998 12.271 0.203 1.00 0.50 C ATOM 297 CG GLU 20 36.878 11.490 0.878 1.00 0.50 C ATOM 298 CD GLU 20 36.666 10.110 0.282 1.00 0.50 C ATOM 299 OE1 GLU 20 37.635 9.325 0.192 1.00 0.50 O ATOM 300 OE2 GLU 20 35.512 9.811 -0.110 1.00 0.50 O ATOM 307 N PHE 21 36.745 14.253 2.434 1.00 0.50 N ATOM 308 CA PHE 21 36.660 14.627 3.841 1.00 0.50 C ATOM 309 C PHE 21 36.273 13.435 4.705 1.00 0.50 C ATOM 310 O PHE 21 35.095 13.096 4.822 1.00 0.50 O ATOM 311 CB PHE 21 35.643 15.760 4.035 1.00 0.50 C ATOM 312 CG PHE 21 35.609 16.310 5.440 1.00 0.50 C ATOM 313 CD1 PHE 21 36.602 17.174 5.886 1.00 0.50 C ATOM 314 CD2 PHE 21 34.583 15.958 6.309 1.00 0.50 C ATOM 315 CE1 PHE 21 36.575 17.682 7.182 1.00 0.50 C ATOM 316 CE2 PHE 21 34.547 16.461 7.608 1.00 0.50 C ATOM 317 CZ PHE 21 35.545 17.324 8.043 1.00 0.50 C ATOM 327 N GLU 22 37.272 12.799 5.310 1.00 0.50 N ATOM 328 CA GLU 22 37.037 11.642 6.165 1.00 0.50 C ATOM 329 C GLU 22 36.845 12.061 7.617 1.00 0.50 C ATOM 330 O GLU 22 37.813 12.322 8.331 1.00 0.50 O ATOM 331 CB GLU 22 38.202 10.653 6.058 1.00 0.50 C ATOM 332 CG GLU 22 37.794 9.276 5.550 1.00 0.50 C ATOM 333 CD GLU 22 38.607 8.813 4.355 1.00 0.50 C ATOM 334 OE1 GLU 22 38.878 9.627 3.447 1.00 0.50 O ATOM 335 OE2 GLU 22 38.969 7.612 4.322 1.00 0.50 O ATOM 342 N HIS 23 35.590 12.124 8.048 1.00 0.50 N ATOM 343 CA HIS 23 35.268 12.512 9.417 1.00 0.50 C ATOM 344 C HIS 23 35.043 11.288 10.297 1.00 0.50 C ATOM 345 O HIS 23 34.472 11.389 11.382 1.00 0.50 O ATOM 346 CB HIS 23 34.020 13.404 9.441 1.00 0.50 C ATOM 347 CG HIS 23 33.503 13.659 10.823 1.00 0.50 C ATOM 348 ND1 HIS 23 32.472 12.934 11.380 1.00 0.50 N ATOM 349 CD2 HIS 23 33.888 14.565 11.758 1.00 0.50 C ATOM 350 CE1 HIS 23 32.242 13.387 12.605 1.00 0.50 C ATOM 351 NE2 HIS 23 33.088 14.374 12.857 1.00 0.50 N ATOM 359 N GLY 24 35.495 10.133 9.821 1.00 0.50 N ATOM 360 CA GLY 24 35.343 8.887 10.564 1.00 0.50 C ATOM 361 C GLY 24 35.367 9.135 12.067 1.00 0.50 C ATOM 362 O GLY 24 34.745 8.404 12.837 1.00 0.50 O ATOM 366 N THR 25 36.092 10.170 12.478 1.00 0.50 N ATOM 367 CA THR 25 36.199 10.518 13.891 1.00 0.50 C ATOM 368 C THR 25 36.873 11.871 14.076 1.00 0.50 C ATOM 369 O THR 25 38.093 11.954 14.215 1.00 0.50 O ATOM 370 CB THR 25 36.991 9.444 14.670 1.00 0.50 C ATOM 371 OG1 THR 25 38.180 9.125 13.936 1.00 0.50 O ATOM 372 CG2 THR 25 36.165 8.180 14.858 1.00 0.50 C ATOM 380 N THR 26 36.070 12.930 14.076 1.00 0.50 N ATOM 381 CA THR 26 36.588 14.283 14.244 1.00 0.50 C ATOM 382 C THR 26 35.730 15.085 15.214 1.00 0.50 C ATOM 383 O THR 26 34.591 15.436 14.907 1.00 0.50 O ATOM 384 CB THR 26 36.655 15.025 12.890 1.00 0.50 C ATOM 385 OG1 THR 26 37.494 14.281 11.998 1.00 0.50 O ATOM 386 CG2 THR 26 37.223 16.428 13.062 1.00 0.50 C ATOM 394 N SER 27 36.283 15.370 16.389 1.00 0.50 N ATOM 395 CA SER 27 35.568 16.131 17.407 1.00 0.50 C ATOM 396 C SER 27 35.722 17.630 17.182 1.00 0.50 C ATOM 397 O SER 27 36.500 18.293 17.868 1.00 0.50 O ATOM 398 CB SER 27 36.076 15.761 18.803 1.00 0.50 C ATOM 399 OG SER 27 35.859 14.384 19.061 1.00 0.50 O ATOM 405 N GLY 28 34.976 18.158 16.217 1.00 0.50 N ATOM 406 CA GLY 28 35.028 19.581 15.902 1.00 0.50 C ATOM 407 C GLY 28 36.105 19.876 14.866 1.00 0.50 C ATOM 408 O GLY 28 36.705 20.950 14.869 1.00 0.50 O ATOM 412 N LYS 29 36.348 18.914 13.982 1.00 0.50 N ATOM 413 CA LYS 29 37.355 19.069 12.939 1.00 0.50 C ATOM 414 C LYS 29 36.766 18.799 11.560 1.00 0.50 C ATOM 415 O LYS 29 36.175 17.746 11.322 1.00 0.50 O ATOM 416 CB LYS 29 38.537 18.129 13.193 1.00 0.50 C ATOM 417 CG LYS 29 39.007 18.109 14.638 1.00 0.50 C ATOM 418 CD LYS 29 40.527 18.101 14.730 1.00 0.50 C ATOM 419 CE LYS 29 41.122 19.447 14.333 1.00 0.50 C ATOM 420 NZ LYS 29 42.612 19.401 14.290 1.00 0.50 N ATOM 434 N ARG 30 36.929 19.759 10.655 1.00 0.50 N ATOM 435 CA ARG 30 36.413 19.626 9.298 1.00 0.50 C ATOM 436 C ARG 30 37.414 20.150 8.275 1.00 0.50 C ATOM 437 O ARG 30 37.307 21.284 7.811 1.00 0.50 O ATOM 438 CB ARG 30 35.085 20.374 9.154 1.00 0.50 C ATOM 439 CG ARG 30 33.957 19.782 9.987 1.00 0.50 C ATOM 440 CD ARG 30 33.534 18.416 9.467 1.00 0.50 C ATOM 441 NE ARG 30 32.356 17.914 10.166 1.00 0.50 N ATOM 442 CZ ARG 30 32.383 17.190 11.283 1.00 0.50 C ATOM 443 NH1 ARG 30 33.515 17.026 11.963 1.00 0.50 H ATOM 444 NH2 ARG 30 31.265 16.614 11.720 1.00 0.50 H ATOM 458 N VAL 31 38.389 19.315 7.928 1.00 0.50 N ATOM 459 CA VAL 31 39.411 19.692 6.960 1.00 0.50 C ATOM 460 C VAL 31 39.214 18.960 5.638 1.00 0.50 C ATOM 461 O VAL 31 38.255 18.206 5.471 1.00 0.50 O ATOM 462 CB VAL 31 40.829 19.403 7.500 1.00 0.50 C ATOM 463 CG1 VAL 31 41.093 20.190 8.779 1.00 0.50 C ATOM 464 CG2 VAL 31 41.007 17.910 7.755 1.00 0.50 C ATOM 474 N VAL 32 40.127 19.187 4.700 1.00 0.50 N ATOM 475 CA VAL 32 40.056 18.549 3.391 1.00 0.50 C ATOM 476 C VAL 32 41.402 17.961 2.990 1.00 0.50 C ATOM 477 O VAL 32 42.437 18.615 3.114 1.00 0.50 O ATOM 478 CB VAL 32 39.589 19.545 2.306 1.00 0.50 C ATOM 479 CG1 VAL 32 39.575 18.882 0.933 1.00 0.50 C ATOM 480 CG2 VAL 32 38.204 20.087 2.643 1.00 0.50 C ATOM 490 N TYR 33 41.383 16.722 2.510 1.00 0.50 N ATOM 491 CA TYR 33 42.603 16.044 2.090 1.00 0.50 C ATOM 492 C TYR 33 42.674 15.926 0.573 1.00 0.50 C ATOM 493 O TYR 33 41.796 15.338 -0.056 1.00 0.50 O ATOM 494 CB TYR 33 42.682 14.647 2.721 1.00 0.50 C ATOM 495 CG TYR 33 42.856 14.669 4.225 1.00 0.50 C ATOM 496 CD1 TYR 33 43.394 15.782 4.866 1.00 0.50 C ATOM 497 CD2 TYR 33 42.481 13.574 5.000 1.00 0.50 C ATOM 498 CE1 TYR 33 43.558 15.805 6.248 1.00 0.50 C ATOM 499 CE2 TYR 33 42.640 13.587 6.382 1.00 0.50 C ATOM 500 CZ TYR 33 43.179 14.705 6.997 1.00 0.50 C ATOM 501 OH TYR 33 43.336 14.721 8.364 1.00 0.50 H ATOM 511 N VAL 34 43.725 16.494 -0.009 1.00 0.50 N ATOM 512 CA VAL 34 43.913 16.456 -1.455 1.00 0.50 C ATOM 513 C VAL 34 45.311 15.972 -1.815 1.00 0.50 C ATOM 514 O VAL 34 46.260 16.162 -1.054 1.00 0.50 O ATOM 515 CB VAL 34 43.671 17.843 -2.089 1.00 0.50 C ATOM 516 CG1 VAL 34 44.669 18.865 -1.553 1.00 0.50 C ATOM 517 CG2 VAL 34 43.770 17.757 -3.609 1.00 0.50 C ATOM 527 N ASP 35 45.433 15.345 -2.981 1.00 0.50 N ATOM 528 CA ASP 35 46.716 14.833 -3.444 1.00 0.50 C ATOM 529 C ASP 35 47.246 13.749 -2.515 1.00 0.50 C ATOM 530 O ASP 35 48.409 13.355 -2.602 1.00 0.50 O ATOM 531 CB ASP 35 47.736 15.972 -3.555 1.00 0.50 C ATOM 532 CG ASP 35 47.386 16.982 -4.631 1.00 0.50 C ATOM 533 OD1 ASP 35 48.018 18.058 -4.691 1.00 0.50 O ATOM 534 OD2 ASP 35 46.460 16.697 -5.425 1.00 0.50 O ATOM 539 N GLY 36 46.385 13.269 -1.622 1.00 0.50 N ATOM 540 CA GLY 36 46.764 12.230 -0.674 1.00 0.50 C ATOM 541 C GLY 36 47.286 12.832 0.624 1.00 0.50 C ATOM 542 O GLY 36 47.741 12.113 1.514 1.00 0.50 O ATOM 546 N LYS 37 47.222 14.155 0.724 1.00 0.50 N ATOM 547 CA LYS 37 47.688 14.857 1.914 1.00 0.50 C ATOM 548 C LYS 37 46.526 15.228 2.826 1.00 0.50 C ATOM 549 O LYS 37 45.364 15.002 2.489 1.00 0.50 O ATOM 550 CB LYS 37 48.464 16.117 1.523 1.00 0.50 C ATOM 551 CG LYS 37 49.701 15.841 0.683 1.00 0.50 C ATOM 552 CD LYS 37 50.508 17.110 0.447 1.00 0.50 C ATOM 553 CE LYS 37 51.785 16.828 -0.337 1.00 0.50 C ATOM 554 NZ LYS 37 52.576 18.071 -0.568 1.00 0.50 N ATOM 568 N GLU 38 46.846 15.798 3.982 1.00 0.50 N ATOM 569 CA GLU 38 45.829 16.201 4.946 1.00 0.50 C ATOM 570 C GLU 38 46.282 17.414 5.749 1.00 0.50 C ATOM 571 O GLU 38 45.501 18.002 6.497 1.00 0.50 O ATOM 572 CB GLU 38 45.501 15.043 5.893 1.00 0.50 C ATOM 573 CG GLU 38 45.029 15.491 7.270 1.00 0.50 C ATOM 574 CD GLU 38 44.841 14.342 8.244 1.00 0.50 C ATOM 575 OE1 GLU 38 45.795 13.564 8.465 1.00 0.50 O ATOM 576 OE2 GLU 38 43.718 14.213 8.788 1.00 0.50 O ATOM 583 N GLU 39 47.548 17.784 5.591 1.00 0.50 N ATOM 584 CA GLU 39 48.108 18.928 6.301 1.00 0.50 C ATOM 585 C GLU 39 47.100 20.066 6.392 1.00 0.50 C ATOM 586 O GLU 39 47.240 20.969 7.217 1.00 0.50 O ATOM 587 CB GLU 39 49.383 19.416 5.607 1.00 0.50 C ATOM 588 CG GLU 39 49.150 19.949 4.199 1.00 0.50 C ATOM 589 CD GLU 39 50.366 20.640 3.610 1.00 0.50 C ATOM 590 OE1 GLU 39 51.413 19.982 3.424 1.00 0.50 O ATOM 591 OE2 GLU 39 50.273 21.861 3.338 1.00 0.50 O ATOM 598 N ILE 40 46.084 20.020 5.536 1.00 0.50 N ATOM 599 CA ILE 40 45.051 21.048 5.517 1.00 0.50 C ATOM 600 C ILE 40 44.062 20.856 6.661 1.00 0.50 C ATOM 601 O ILE 40 43.182 21.689 6.878 1.00 0.50 O ATOM 602 CB ILE 40 44.288 21.048 4.172 1.00 0.50 C ATOM 603 CG1 ILE 40 43.538 19.724 3.985 1.00 0.50 C ATOM 604 CG2 ILE 40 45.248 21.295 3.006 1.00 0.50 C ATOM 605 CD1 ILE 40 42.614 19.708 2.776 1.00 0.50 C ATOM 617 N ARG 41 44.212 19.754 7.387 1.00 0.50 N ATOM 618 CA ARG 41 43.333 19.451 8.509 1.00 0.50 C ATOM 619 C ARG 41 43.779 20.177 9.772 1.00 0.50 C ATOM 620 O ARG 41 43.123 21.115 10.224 1.00 0.50 O ATOM 621 CB ARG 41 43.293 17.942 8.766 1.00 0.50 C ATOM 622 CG ARG 41 42.351 17.538 9.891 1.00 0.50 C ATOM 623 CD ARG 41 42.282 16.025 10.046 1.00 0.50 C ATOM 624 NE ARG 41 41.414 15.637 11.154 1.00 0.50 N ATOM 625 CZ ARG 41 41.178 14.383 11.534 1.00 0.50 C ATOM 626 NH1 ARG 41 41.882 13.372 11.028 1.00 0.50 H ATOM 627 NH2 ARG 41 40.217 14.134 12.420 1.00 0.50 H ATOM 641 N LYS 42 44.898 19.736 10.337 1.00 0.50 N ATOM 642 CA LYS 42 45.434 20.344 11.550 1.00 0.50 C ATOM 643 C LYS 42 44.805 21.707 11.808 1.00 0.50 C ATOM 644 O LYS 42 43.977 21.858 12.708 1.00 0.50 O ATOM 645 CB LYS 42 46.955 20.486 11.449 1.00 0.50 C ATOM 646 CG LYS 42 47.604 21.049 12.704 1.00 0.50 C ATOM 647 CD LYS 42 49.120 21.096 12.574 1.00 0.50 C ATOM 648 CE LYS 42 49.776 21.677 13.820 1.00 0.50 C ATOM 649 NZ LYS 42 51.261 21.715 13.698 1.00 0.50 N ATOM 663 N GLU 43 45.201 22.697 11.015 1.00 0.50 N ATOM 664 CA GLU 43 44.676 24.049 11.157 1.00 0.50 C ATOM 665 C GLU 43 43.157 24.064 11.047 1.00 0.50 C ATOM 666 O GLU 43 42.458 24.381 12.010 1.00 0.50 O ATOM 667 CB GLU 43 45.283 24.972 10.097 1.00 0.50 C ATOM 668 CG GLU 43 46.774 25.224 10.283 1.00 0.50 C ATOM 669 CD GLU 43 47.353 26.182 9.258 1.00 0.50 C ATOM 670 OE1 GLU 43 46.627 26.600 8.331 1.00 0.50 O ATOM 671 OE2 GLU 43 48.558 26.513 9.380 1.00 0.50 O ATOM 678 N TRP 44 42.651 23.723 9.867 1.00 0.50 N ATOM 679 CA TRP 44 41.213 23.697 9.628 1.00 0.50 C ATOM 680 C TRP 44 40.451 23.331 10.895 1.00 0.50 C ATOM 681 O TRP 44 39.575 24.073 11.341 1.00 0.50 O ATOM 682 CB TRP 44 40.874 22.702 8.510 1.00 0.50 C ATOM 683 CG TRP 44 41.619 22.947 7.231 1.00 0.50 C ATOM 684 CD1 TRP 44 42.759 22.318 6.811 1.00 0.50 C ATOM 685 CD2 TRP 44 41.274 23.888 6.209 1.00 0.50 C ATOM 686 NE1 TRP 44 43.143 22.813 5.586 1.00 0.50 N ATOM 687 CE2 TRP 44 42.252 23.776 5.196 1.00 0.50 C ATOM 688 CE3 TRP 44 40.236 24.814 6.053 1.00 0.50 C ATOM 689 CZ2 TRP 44 42.219 24.558 4.038 1.00 0.50 C ATOM 690 CZ3 TRP 44 40.204 25.591 4.901 1.00 0.50 C ATOM 691 CH2 TRP 44 41.189 25.458 3.910 1.00 0.50 H ATOM 702 N MET 45 40.787 22.182 11.472 1.00 0.50 N ATOM 703 CA MET 45 40.135 21.714 12.689 1.00 0.50 C ATOM 704 C MET 45 40.120 22.801 13.758 1.00 0.50 C ATOM 705 O MET 45 39.068 23.135 14.301 1.00 0.50 O ATOM 706 CB MET 45 40.837 20.464 13.228 1.00 0.50 C ATOM 707 CG MET 45 40.570 19.214 12.401 1.00 0.50 C ATOM 708 SD MET 45 41.206 17.718 13.195 1.00 0.50 S ATOM 709 CE MET 45 42.966 17.946 12.968 1.00 0.50 C ATOM 719 N PHE 46 41.294 23.347 14.055 1.00 0.50 N ATOM 720 CA PHE 46 41.418 24.396 15.060 1.00 0.50 C ATOM 721 C PHE 46 40.358 25.472 14.867 1.00 0.50 C ATOM 722 O PHE 46 39.519 25.693 15.741 1.00 0.50 O ATOM 723 CB PHE 46 42.815 25.030 15.006 1.00 0.50 C ATOM 724 CG PHE 46 43.869 24.238 15.737 1.00 0.50 C ATOM 725 CD1 PHE 46 44.375 23.062 15.195 1.00 0.50 C ATOM 726 CD2 PHE 46 44.350 24.671 16.967 1.00 0.50 C ATOM 727 CE1 PHE 46 45.347 22.327 15.867 1.00 0.50 C ATOM 728 CE2 PHE 46 45.323 23.943 17.648 1.00 0.50 C ATOM 729 CZ PHE 46 45.820 22.770 17.096 1.00 0.50 C ATOM 739 N LYS 47 40.400 26.139 13.719 1.00 0.50 N ATOM 740 CA LYS 47 39.442 27.193 13.410 1.00 0.50 C ATOM 741 C LYS 47 38.010 26.699 13.565 1.00 0.50 C ATOM 742 O LYS 47 37.075 27.495 13.660 1.00 0.50 O ATOM 743 CB LYS 47 39.660 27.712 11.986 1.00 0.50 C ATOM 744 CG LYS 47 40.975 28.454 11.798 1.00 0.50 C ATOM 745 CD LYS 47 41.242 28.749 10.327 1.00 0.50 C ATOM 746 CE LYS 47 42.624 29.354 10.116 1.00 0.50 C ATOM 747 NZ LYS 47 42.924 29.552 8.669 1.00 0.50 N ATOM 761 N LEU 48 37.843 25.381 13.590 1.00 0.50 N ATOM 762 CA LEU 48 36.523 24.778 13.734 1.00 0.50 C ATOM 763 C LEU 48 35.481 25.820 14.119 1.00 0.50 C ATOM 764 O LEU 48 34.444 25.946 13.467 1.00 0.50 O ATOM 765 CB LEU 48 36.559 23.667 14.790 1.00 0.50 C ATOM 766 CG LEU 48 35.208 23.066 15.186 1.00 0.50 C ATOM 767 CD1 LEU 48 34.561 22.392 13.982 1.00 0.50 C ATOM 768 CD2 LEU 48 35.391 22.067 16.320 1.00 0.50 C ATOM 780 N VAL 49 35.760 26.563 15.185 1.00 0.50 N ATOM 781 CA VAL 49 34.847 27.595 15.660 1.00 0.50 C ATOM 782 C VAL 49 33.672 27.772 14.706 1.00 0.50 C ATOM 783 O VAL 49 32.593 27.221 14.928 1.00 0.50 O ATOM 784 CB VAL 49 35.572 28.948 15.837 1.00 0.50 C ATOM 785 CG1 VAL 49 34.568 30.075 16.060 1.00 0.50 C ATOM 786 CG2 VAL 49 36.552 28.878 17.003 1.00 0.50 C ATOM 796 N GLY 50 33.886 28.544 13.647 1.00 0.50 N ATOM 797 CA GLY 50 32.845 28.795 12.658 1.00 0.50 C ATOM 798 C GLY 50 33.425 28.857 11.251 1.00 0.50 C ATOM 799 O GLY 50 33.016 28.103 10.367 1.00 0.50 O ATOM 803 N LYS 51 34.377 29.760 11.048 1.00 0.50 N ATOM 804 CA LYS 51 35.014 29.922 9.746 1.00 0.50 C ATOM 805 C LYS 51 35.877 28.715 9.402 1.00 0.50 C ATOM 806 O LYS 51 37.040 28.637 9.801 1.00 0.50 O ATOM 807 CB LYS 51 35.867 31.193 9.723 1.00 0.50 C ATOM 808 CG LYS 51 36.507 31.479 8.373 1.00 0.50 C ATOM 809 CD LYS 51 37.250 32.809 8.379 1.00 0.50 C ATOM 810 CE LYS 51 37.906 33.093 7.033 1.00 0.50 C ATOM 811 NZ LYS 51 38.619 34.403 7.032 1.00 0.50 N ATOM 825 N GLU 52 35.301 27.774 8.661 1.00 0.50 N ATOM 826 CA GLU 52 36.017 26.569 8.262 1.00 0.50 C ATOM 827 C GLU 52 36.515 26.674 6.826 1.00 0.50 C ATOM 828 O GLU 52 35.809 26.310 5.886 1.00 0.50 O ATOM 829 CB GLU 52 35.117 25.339 8.411 1.00 0.50 C ATOM 830 CG GLU 52 34.309 25.322 9.702 1.00 0.50 C ATOM 831 CD GLU 52 33.406 24.109 9.830 1.00 0.50 C ATOM 832 OE1 GLU 52 32.250 24.154 9.358 1.00 0.50 O ATOM 833 OE2 GLU 52 33.861 23.099 10.421 1.00 0.50 O ATOM 840 N THR 53 37.734 27.176 6.663 1.00 0.50 N ATOM 841 CA THR 53 38.328 27.331 5.340 1.00 0.50 C ATOM 842 C THR 53 39.749 26.783 5.308 1.00 0.50 C ATOM 843 O THR 53 40.542 27.032 6.216 1.00 0.50 O ATOM 844 CB THR 53 38.345 28.815 4.909 1.00 0.50 C ATOM 845 OG1 THR 53 37.888 29.619 6.002 1.00 0.50 O ATOM 846 CG2 THR 53 37.443 29.046 3.704 1.00 0.50 C ATOM 854 N PHE 54 40.065 26.033 4.256 1.00 0.50 N ATOM 855 CA PHE 54 41.391 25.448 4.103 1.00 0.50 C ATOM 856 C PHE 54 42.120 26.039 2.904 1.00 0.50 C ATOM 857 O PHE 54 41.510 26.318 1.871 1.00 0.50 O ATOM 858 CB PHE 54 41.291 23.923 3.949 1.00 0.50 C ATOM 859 CG PHE 54 40.242 23.482 2.960 1.00 0.50 C ATOM 860 CD1 PHE 54 40.524 23.439 1.600 1.00 0.50 C ATOM 861 CD2 PHE 54 38.973 23.114 3.395 1.00 0.50 C ATOM 862 CE1 PHE 54 39.557 23.033 0.684 1.00 0.50 C ATOM 863 CE2 PHE 54 37.999 22.707 2.486 1.00 0.50 C ATOM 864 CZ PHE 54 38.294 22.667 1.129 1.00 0.50 C ATOM 874 N TYR 55 43.427 26.229 3.047 1.00 0.50 N ATOM 875 CA TYR 55 44.241 26.788 1.975 1.00 0.50 C ATOM 876 C TYR 55 44.797 25.691 1.076 1.00 0.50 C ATOM 877 O TYR 55 45.281 24.666 1.557 1.00 0.50 O ATOM 878 CB TYR 55 45.396 27.616 2.556 1.00 0.50 C ATOM 879 CG TYR 55 46.298 28.222 1.503 1.00 0.50 C ATOM 880 CD1 TYR 55 45.901 29.347 0.783 1.00 0.50 C ATOM 881 CD2 TYR 55 47.546 27.667 1.231 1.00 0.50 C ATOM 882 CE1 TYR 55 46.726 29.906 -0.188 1.00 0.50 C ATOM 883 CE2 TYR 55 48.379 28.218 0.262 1.00 0.50 C ATOM 884 CZ TYR 55 47.961 29.335 -0.440 1.00 0.50 C ATOM 885 OH TYR 55 48.786 29.884 -1.399 1.00 0.50 H ATOM 895 N VAL 56 44.723 25.911 -0.233 1.00 0.50 N ATOM 896 CA VAL 56 45.219 24.941 -1.202 1.00 0.50 C ATOM 897 C VAL 56 46.713 25.118 -1.444 1.00 0.50 C ATOM 898 O VAL 56 47.124 25.698 -2.448 1.00 0.50 O ATOM 899 CB VAL 56 44.464 25.054 -2.546 1.00 0.50 C ATOM 900 CG1 VAL 56 44.851 23.913 -3.480 1.00 0.50 C ATOM 901 CG2 VAL 56 42.958 25.055 -2.311 1.00 0.50 C ATOM 911 N GLY 57 47.521 24.617 -0.516 1.00 0.50 N ATOM 912 CA GLY 57 48.971 24.719 -0.626 1.00 0.50 C ATOM 913 C GLY 57 49.374 25.540 -1.844 1.00 0.50 C ATOM 914 O GLY 57 49.667 26.730 -1.732 1.00 0.50 O ATOM 918 N ALA 58 49.388 24.898 -3.007 1.00 0.50 N ATOM 919 CA ALA 58 49.756 25.568 -4.248 1.00 0.50 C ATOM 920 C ALA 58 48.537 25.799 -5.132 1.00 0.50 C ATOM 921 O ALA 58 47.586 25.017 -5.110 1.00 0.50 O ATOM 922 CB ALA 58 50.800 24.748 -5.001 1.00 0.50 C ATOM 928 N ALA 59 48.570 26.877 -5.908 1.00 0.50 N ATOM 929 CA ALA 59 47.467 27.211 -6.802 1.00 0.50 C ATOM 930 C ALA 59 46.988 28.640 -6.574 1.00 0.50 C ATOM 931 O ALA 59 46.336 29.231 -7.434 1.00 0.50 O ATOM 932 CB ALA 59 46.312 26.235 -6.601 1.00 0.50 C ATOM 938 N LYS 60 47.315 29.189 -5.409 1.00 0.50 N ATOM 939 CA LYS 60 46.918 30.549 -5.066 1.00 0.50 C ATOM 940 C LYS 60 45.431 30.624 -4.739 1.00 0.50 C ATOM 941 O LYS 60 44.812 31.679 -4.861 1.00 0.50 O ATOM 942 CB LYS 60 47.245 31.508 -6.214 1.00 0.50 C ATOM 943 CG LYS 60 48.730 31.609 -6.524 1.00 0.50 C ATOM 944 CD LYS 60 48.997 32.590 -7.659 1.00 0.50 C ATOM 945 CE LYS 60 50.470 32.621 -8.043 1.00 0.50 C ATOM 946 NZ LYS 60 50.727 33.556 -9.176 1.00 0.50 N ATOM 960 N THR 61 44.864 29.496 -4.324 1.00 0.50 N ATOM 961 CA THR 61 43.450 29.431 -3.979 1.00 0.50 C ATOM 962 C THR 61 43.224 28.586 -2.731 1.00 0.50 C ATOM 963 O THR 61 43.919 27.595 -2.509 1.00 0.50 O ATOM 964 CB THR 61 42.619 28.848 -5.144 1.00 0.50 C ATOM 965 OG1 THR 61 41.231 28.900 -4.792 1.00 0.50 O ATOM 966 CG2 THR 61 43.011 27.405 -5.431 1.00 0.50 C ATOM 974 N LYS 62 42.251 28.985 -1.920 1.00 0.50 N ATOM 975 CA LYS 62 41.933 28.265 -0.693 1.00 0.50 C ATOM 976 C LYS 62 40.589 27.557 -0.802 1.00 0.50 C ATOM 977 O LYS 62 39.624 28.114 -1.325 1.00 0.50 O ATOM 978 CB LYS 62 41.919 29.223 0.501 1.00 0.50 C ATOM 979 CG LYS 62 41.571 28.555 1.822 1.00 0.50 C ATOM 980 CD LYS 62 41.880 29.463 3.005 1.00 0.50 C ATOM 981 CE LYS 62 40.913 30.639 3.081 1.00 0.50 C ATOM 982 NZ LYS 62 41.130 31.454 4.309 1.00 0.50 N ATOM 996 N ALA 63 40.532 26.324 -0.309 1.00 0.50 N ATOM 997 CA ALA 63 39.306 25.537 -0.352 1.00 0.50 C ATOM 998 C ALA 63 38.347 25.953 0.756 1.00 0.50 C ATOM 999 O ALA 63 38.755 26.160 1.899 1.00 0.50 O ATOM 1000 CB ALA 63 39.629 24.050 -0.231 1.00 0.50 C ATOM 1006 N THR 64 37.070 26.075 0.411 1.00 0.50 N ATOM 1007 CA THR 64 36.050 26.467 1.376 1.00 0.50 C ATOM 1008 C THR 64 35.332 25.249 1.943 1.00 0.50 C ATOM 1009 O THR 64 34.563 24.588 1.245 1.00 0.50 O ATOM 1010 CB THR 64 35.012 27.417 0.735 1.00 0.50 C ATOM 1011 OG1 THR 64 35.690 28.588 0.262 1.00 0.50 O ATOM 1012 CG2 THR 64 33.947 27.825 1.742 1.00 0.50 C ATOM 1020 N ILE 65 35.587 24.956 3.214 1.00 0.50 N ATOM 1021 CA ILE 65 34.966 23.816 3.878 1.00 0.50 C ATOM 1022 C ILE 65 33.979 24.272 4.945 1.00 0.50 C ATOM 1023 O ILE 65 34.362 24.545 6.083 1.00 0.50 O ATOM 1024 CB ILE 65 36.031 22.897 4.522 1.00 0.50 C ATOM 1025 CG1 ILE 65 37.116 22.541 3.498 1.00 0.50 C ATOM 1026 CG2 ILE 65 35.382 21.631 5.085 1.00 0.50 C ATOM 1027 CD1 ILE 65 38.153 21.559 4.020 1.00 0.50 C ATOM 1039 N ASN 66 32.707 24.352 4.572 1.00 0.50 N ATOM 1040 CA ASN 66 31.662 24.775 5.497 1.00 0.50 C ATOM 1041 C ASN 66 30.695 23.637 5.793 1.00 0.50 C ATOM 1042 O ASN 66 29.724 23.429 5.065 1.00 0.50 O ATOM 1043 CB ASN 66 30.904 25.982 4.932 1.00 0.50 C ATOM 1044 CG ASN 66 31.793 27.200 4.767 1.00 0.50 C ATOM 1045 OD1 ASN 66 32.797 27.352 5.470 1.00 0.50 O ATOM 1046 ND2 ASN 66 31.435 28.080 3.840 1.00 0.50 N ATOM 1053 N ILE 67 30.967 22.900 6.865 1.00 0.50 N ATOM 1054 CA ILE 67 30.121 21.779 7.259 1.00 0.50 C ATOM 1055 C ILE 67 29.332 22.103 8.522 1.00 0.50 C ATOM 1056 O ILE 67 29.484 21.439 9.547 1.00 0.50 O ATOM 1057 CB ILE 67 30.960 20.501 7.491 1.00 0.50 C ATOM 1058 CG1 ILE 67 31.863 20.231 6.281 1.00 0.50 C ATOM 1059 CG2 ILE 67 30.052 19.301 7.766 1.00 0.50 C ATOM 1060 CD1 ILE 67 31.102 20.055 4.976 1.00 0.50 C ATOM 1072 N ASP 68 28.490 23.128 8.441 1.00 0.50 N ATOM 1073 CA ASP 68 27.675 23.541 9.576 1.00 0.50 C ATOM 1074 C ASP 68 27.022 22.342 10.251 1.00 0.50 C ATOM 1075 O ASP 68 25.835 22.081 10.059 1.00 0.50 O ATOM 1076 CB ASP 68 26.602 24.539 9.129 1.00 0.50 C ATOM 1077 CG ASP 68 27.177 25.866 8.671 1.00 0.50 C ATOM 1078 OD1 ASP 68 27.539 26.704 9.524 1.00 0.50 O ATOM 1079 OD2 ASP 68 27.265 26.074 7.440 1.00 0.50 O ATOM 1084 N ALA 69 27.804 21.615 11.041 1.00 0.50 N ATOM 1085 CA ALA 69 27.303 20.440 11.745 1.00 0.50 C ATOM 1086 C ALA 69 26.522 20.838 12.992 1.00 0.50 C ATOM 1087 O ALA 69 25.716 21.767 12.960 1.00 0.50 O ATOM 1088 CB ALA 69 28.460 19.520 12.125 1.00 0.50 C ATOM 1094 N ILE 70 26.766 20.127 14.087 1.00 0.50 N ATOM 1095 CA ILE 70 26.085 20.404 15.346 1.00 0.50 C ATOM 1096 C ILE 70 24.996 19.377 15.622 1.00 0.50 C ATOM 1097 O ILE 70 25.045 18.255 15.118 1.00 0.50 O ATOM 1098 CB ILE 70 25.467 21.822 15.347 1.00 0.50 C ATOM 1099 CG1 ILE 70 24.423 21.946 14.231 1.00 0.50 C ATOM 1100 CG2 ILE 70 26.556 22.886 15.190 1.00 0.50 C ATOM 1101 CD1 ILE 70 23.610 23.231 14.292 1.00 0.50 C ATOM 1113 N SER 71 24.011 19.766 16.426 1.00 0.50 N ATOM 1114 CA SER 71 22.907 18.879 16.769 1.00 0.50 C ATOM 1115 C SER 71 23.054 17.525 16.086 1.00 0.50 C ATOM 1116 O SER 71 22.850 16.481 16.704 1.00 0.50 O ATOM 1117 CB SER 71 21.570 19.514 16.378 1.00 0.50 C ATOM 1118 OG SER 71 21.489 19.675 14.971 1.00 0.50 O ATOM 1124 N GLY 72 23.406 17.551 14.805 1.00 0.50 N ATOM 1125 CA GLY 72 23.581 16.326 14.033 1.00 0.50 C ATOM 1126 C GLY 72 24.532 16.542 12.864 1.00 0.50 C ATOM 1127 O GLY 72 25.454 17.353 12.942 1.00 0.50 O ATOM 1131 N PHE 73 24.303 15.811 11.778 1.00 0.50 N ATOM 1132 CA PHE 73 25.139 15.921 10.590 1.00 0.50 C ATOM 1133 C PHE 73 24.614 16.994 9.644 1.00 0.50 C ATOM 1134 O PHE 73 23.412 17.084 9.398 1.00 0.50 O ATOM 1135 CB PHE 73 25.211 14.574 9.857 1.00 0.50 C ATOM 1136 CG PHE 73 25.954 13.508 10.622 1.00 0.50 C ATOM 1137 CD1 PHE 73 26.747 13.841 11.714 1.00 0.50 C ATOM 1138 CD2 PHE 73 25.855 12.173 10.245 1.00 0.50 C ATOM 1139 CE1 PHE 73 27.434 12.858 12.421 1.00 0.50 C ATOM 1140 CE2 PHE 73 26.539 11.182 10.947 1.00 0.50 C ATOM 1141 CZ PHE 73 27.329 11.528 12.036 1.00 0.50 C ATOM 1151 N ALA 74 25.523 17.807 9.117 1.00 0.50 N ATOM 1152 CA ALA 74 25.154 18.877 8.199 1.00 0.50 C ATOM 1153 C ALA 74 26.222 19.082 7.132 1.00 0.50 C ATOM 1154 O ALA 74 26.837 20.145 7.052 1.00 0.50 O ATOM 1155 CB ALA 74 24.927 20.176 8.966 1.00 0.50 C ATOM 1161 N TYR 75 26.442 18.055 6.317 1.00 0.50 N ATOM 1162 CA TYR 75 27.438 18.122 5.254 1.00 0.50 C ATOM 1163 C TYR 75 27.328 19.426 4.476 1.00 0.50 C ATOM 1164 O TYR 75 26.228 19.901 4.191 1.00 0.50 O ATOM 1165 CB TYR 75 27.278 16.934 4.296 1.00 0.50 C ATOM 1166 CG TYR 75 27.628 15.600 4.919 1.00 0.50 C ATOM 1167 CD1 TYR 75 28.714 15.478 5.783 1.00 0.50 C ATOM 1168 CD2 TYR 75 26.872 14.464 4.640 1.00 0.50 C ATOM 1169 CE1 TYR 75 29.041 14.253 6.357 1.00 0.50 C ATOM 1170 CE2 TYR 75 27.190 13.234 5.207 1.00 0.50 C ATOM 1171 CZ TYR 75 28.274 13.138 6.063 1.00 0.50 C ATOM 1172 OH TYR 75 28.590 11.922 6.628 1.00 0.50 H ATOM 1182 N GLU 76 28.474 20.006 4.136 1.00 0.50 N ATOM 1183 CA GLU 76 28.510 21.258 3.391 1.00 0.50 C ATOM 1184 C GLU 76 29.943 21.708 3.136 1.00 0.50 C ATOM 1185 O GLU 76 30.383 22.735 3.652 1.00 0.50 O ATOM 1186 CB GLU 76 27.748 22.351 4.146 1.00 0.50 C ATOM 1187 CG GLU 76 27.664 23.672 3.393 1.00 0.50 C ATOM 1188 CD GLU 76 26.998 24.778 4.192 1.00 0.50 C ATOM 1189 OE1 GLU 76 27.516 25.155 5.265 1.00 0.50 O ATOM 1190 OE2 GLU 76 25.935 25.269 3.741 1.00 0.50 O ATOM 1197 N TYR 77 30.668 20.931 2.338 1.00 0.50 N ATOM 1198 CA TYR 77 32.053 21.247 2.013 1.00 0.50 C ATOM 1199 C TYR 77 32.173 21.816 0.605 1.00 0.50 C ATOM 1200 O TYR 77 31.901 21.128 -0.378 1.00 0.50 O ATOM 1201 CB TYR 77 32.932 19.995 2.142 1.00 0.50 C ATOM 1202 CG TYR 77 33.412 19.733 3.553 1.00 0.50 C ATOM 1203 CD1 TYR 77 34.402 20.523 4.130 1.00 0.50 C ATOM 1204 CD2 TYR 77 32.872 18.693 4.306 1.00 0.50 C ATOM 1205 CE1 TYR 77 34.848 20.284 5.427 1.00 0.50 C ATOM 1206 CE2 TYR 77 33.310 18.444 5.602 1.00 0.50 C ATOM 1207 CZ TYR 77 34.297 19.244 6.154 1.00 0.50 C ATOM 1208 OH TYR 77 34.732 19.001 7.438 1.00 0.50 H ATOM 1218 N THR 78 32.580 23.078 0.515 1.00 0.50 N ATOM 1219 CA THR 78 32.736 23.743 -0.773 1.00 0.50 C ATOM 1220 C THR 78 34.206 23.870 -1.153 1.00 0.50 C ATOM 1221 O THR 78 35.059 24.118 -0.300 1.00 0.50 O ATOM 1222 CB THR 78 32.091 25.147 -0.756 1.00 0.50 C ATOM 1223 OG1 THR 78 31.520 25.377 0.538 1.00 0.50 O ATOM 1224 CG2 THR 78 31.000 25.263 -1.812 1.00 0.50 C ATOM 1232 N LEU 79 34.496 23.697 -2.438 1.00 0.50 N ATOM 1233 CA LEU 79 35.848 23.887 -2.950 1.00 0.50 C ATOM 1234 C LEU 79 35.906 25.043 -3.940 1.00 0.50 C ATOM 1235 O LEU 79 35.284 24.996 -5.001 1.00 0.50 O ATOM 1236 CB LEU 79 36.345 22.604 -3.625 1.00 0.50 C ATOM 1237 CG LEU 79 37.643 22.720 -4.428 1.00 0.50 C ATOM 1238 CD1 LEU 79 38.767 23.234 -3.537 1.00 0.50 C ATOM 1239 CD2 LEU 79 38.012 21.369 -5.026 1.00 0.50 C ATOM 1251 N GLU 80 36.654 26.082 -3.584 1.00 0.50 N ATOM 1252 CA GLU 80 36.794 27.254 -4.441 1.00 0.50 C ATOM 1253 C GLU 80 38.076 27.186 -5.262 1.00 0.50 C ATOM 1254 O GLU 80 39.176 27.315 -4.725 1.00 0.50 O ATOM 1255 CB GLU 80 36.782 28.535 -3.602 1.00 0.50 C ATOM 1256 CG GLU 80 36.831 29.812 -4.430 1.00 0.50 C ATOM 1257 CD GLU 80 36.951 31.070 -3.588 1.00 0.50 C ATOM 1258 OE1 GLU 80 36.010 31.392 -2.832 1.00 0.50 O ATOM 1259 OE2 GLU 80 38.001 31.749 -3.694 1.00 0.50 O ATOM 1266 N ILE 81 37.927 26.982 -6.566 1.00 0.50 N ATOM 1267 CA ILE 81 39.073 26.879 -7.462 1.00 0.50 C ATOM 1268 C ILE 81 39.057 27.989 -8.505 1.00 0.50 C ATOM 1269 O ILE 81 38.134 28.081 -9.314 1.00 0.50 O ATOM 1270 CB ILE 81 39.105 25.505 -8.173 1.00 0.50 C ATOM 1271 CG1 ILE 81 39.093 24.372 -7.141 1.00 0.50 C ATOM 1272 CG2 ILE 81 40.331 25.396 -9.083 1.00 0.50 C ATOM 1273 CD1 ILE 81 40.290 24.385 -6.202 1.00 0.50 C ATOM 1285 N ASN 82 40.085 28.830 -8.481 1.00 0.50 N ATOM 1286 CA ASN 82 40.122 30.019 -9.325 1.00 0.50 C ATOM 1287 C ASN 82 38.894 30.893 -9.100 1.00 0.50 C ATOM 1288 O ASN 82 38.417 31.558 -10.019 1.00 0.50 O ATOM 1289 CB ASN 82 40.227 29.623 -10.802 1.00 0.50 C ATOM 1290 CG ASN 82 41.482 28.825 -11.101 1.00 0.50 C ATOM 1291 OD1 ASN 82 42.600 29.295 -10.873 1.00 0.50 O ATOM 1292 ND2 ASN 82 41.311 27.612 -11.612 1.00 0.50 N ATOM 1299 N GLY 83 38.385 30.885 -7.873 1.00 0.50 N ATOM 1300 CA GLY 83 37.235 31.706 -7.514 1.00 0.50 C ATOM 1301 C GLY 83 35.937 31.082 -8.010 1.00 0.50 C ATOM 1302 O GLY 83 34.862 31.664 -7.865 1.00 0.50 O ATOM 1306 N LYS 84 36.043 29.895 -8.597 1.00 0.50 N ATOM 1307 CA LYS 84 34.872 29.165 -9.067 1.00 0.50 C ATOM 1308 C LYS 84 34.359 28.202 -8.004 1.00 0.50 C ATOM 1309 O LYS 84 35.121 27.404 -7.457 1.00 0.50 O ATOM 1310 CB LYS 84 35.200 28.396 -10.349 1.00 0.50 C ATOM 1311 CG LYS 84 33.996 27.715 -10.983 1.00 0.50 C ATOM 1312 CD LYS 84 34.384 26.966 -12.251 1.00 0.50 C ATOM 1313 CE LYS 84 33.158 26.494 -13.023 1.00 0.50 C ATOM 1314 NZ LYS 84 33.531 25.884 -14.332 1.00 0.50 N ATOM 1328 N SER 85 33.065 28.283 -7.713 1.00 0.50 N ATOM 1329 CA SER 85 32.453 27.434 -6.700 1.00 0.50 C ATOM 1330 C SER 85 32.036 26.090 -7.284 1.00 0.50 C ATOM 1331 O SER 85 31.281 26.032 -8.256 1.00 0.50 O ATOM 1332 CB SER 85 31.236 28.130 -6.085 1.00 0.50 C ATOM 1333 OG SER 85 30.567 27.260 -5.186 1.00 0.50 O ATOM 1339 N LEU 86 32.532 25.011 -6.689 1.00 0.50 N ATOM 1340 CA LEU 86 32.022 23.676 -6.973 1.00 0.50 C ATOM 1341 C LEU 86 31.722 22.915 -5.689 1.00 0.50 C ATOM 1342 O LEU 86 32.633 22.433 -5.014 1.00 0.50 O ATOM 1343 CB LEU 86 33.034 22.889 -7.814 1.00 0.50 C ATOM 1344 CG LEU 86 33.306 23.424 -9.223 1.00 0.50 C ATOM 1345 CD1 LEU 86 34.411 22.615 -9.888 1.00 0.50 C ATOM 1346 CD2 LEU 86 32.032 23.371 -10.057 1.00 0.50 C ATOM 1358 N LYS 87 30.441 22.811 -5.354 1.00 0.50 N ATOM 1359 CA LYS 87 30.019 22.108 -4.148 1.00 0.50 C ATOM 1360 C LYS 87 29.022 21.003 -4.475 1.00 0.50 C ATOM 1361 O LYS 87 28.561 20.887 -5.610 1.00 0.50 O ATOM 1362 CB LYS 87 29.399 23.088 -3.148 1.00 0.50 C ATOM 1363 CG LYS 87 28.155 23.793 -3.668 1.00 0.50 C ATOM 1364 CD LYS 87 27.598 24.770 -2.642 1.00 0.50 C ATOM 1365 CE LYS 87 26.359 25.488 -3.161 1.00 0.50 C ATOM 1366 NZ LYS 87 25.796 26.424 -2.147 1.00 0.50 N ATOM 1380 N LYS 88 28.692 20.194 -3.473 1.00 0.50 N ATOM 1381 CA LYS 88 27.749 19.098 -3.652 1.00 0.50 C ATOM 1382 C LYS 88 28.394 17.930 -4.386 1.00 0.50 C ATOM 1383 O LYS 88 27.706 17.038 -4.882 1.00 0.50 O ATOM 1384 CB LYS 88 26.514 19.575 -4.420 1.00 0.50 C ATOM 1385 CG LYS 88 25.700 20.629 -3.684 1.00 0.50 C ATOM 1386 CD LYS 88 24.539 21.129 -4.532 1.00 0.50 C ATOM 1387 CE LYS 88 23.732 22.199 -3.807 1.00 0.50 C ATOM 1388 NZ LYS 88 22.607 22.704 -4.645 1.00 0.50 N ATOM 1402 N TYR 89 29.722 17.941 -4.454 1.00 0.50 N ATOM 1403 CA TYR 89 30.464 16.883 -5.129 1.00 0.50 C ATOM 1404 C TYR 89 30.353 15.566 -4.372 1.00 0.50 C ATOM 1405 O TYR 89 31.361 14.932 -4.057 1.00 0.50 O ATOM 1406 CB TYR 89 31.941 17.274 -5.275 1.00 0.50 C ATOM 1407 CG TYR 89 32.728 16.347 -6.175 1.00 0.50 C ATOM 1408 CD1 TYR 89 32.535 16.356 -7.554 1.00 0.50 C ATOM 1409 CD2 TYR 89 33.663 15.463 -5.643 1.00 0.50 C ATOM 1410 CE1 TYR 89 33.256 15.503 -8.386 1.00 0.50 C ATOM 1411 CE2 TYR 89 34.388 14.606 -6.464 1.00 0.50 C ATOM 1412 CZ TYR 89 34.178 14.633 -7.832 1.00 0.50 C ATOM 1413 OH TYR 89 34.896 13.787 -8.647 1.00 0.50 H ATOM 1423 N MET 90 29.123 15.156 -4.082 1.00 0.50 N ATOM 1424 CA MET 90 28.879 13.912 -3.362 1.00 0.50 C ATOM 1425 C MET 90 29.806 12.804 -3.845 1.00 0.50 C ATOM 1426 O MET 90 29.748 11.677 -3.357 1.00 0.50 O ATOM 1427 CB MET 90 27.419 13.476 -3.524 1.00 0.50 C ATOM 1428 CG MET 90 26.432 14.384 -2.804 1.00 0.50 C ATOM 1429 SD MET 90 26.652 14.351 -1.010 1.00 0.50 S ATOM 1430 CE MET 90 26.106 12.688 -0.640 1.00 0.50 C ATOM 1440 OXT MET 90 30.630 13.022 -4.737 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.23 43.8 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 57.55 47.5 118 100.0 118 ARMSMC SURFACE . . . . . . . . 82.68 37.0 108 100.0 108 ARMSMC BURIED . . . . . . . . 52.14 54.3 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.55 50.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 78.04 53.0 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 75.57 53.8 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 88.36 43.2 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 67.93 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.65 56.4 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 63.43 63.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 68.15 56.4 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 65.44 60.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 70.84 50.0 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.13 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 62.13 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 57.62 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 62.52 55.6 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 60.96 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.27 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 77.27 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 88.03 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.29 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 65.06 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.47 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.47 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0496 CRMSCA SECONDARY STRUCTURE . . 2.93 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.19 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.99 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.52 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.08 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.23 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.10 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.67 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.87 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.33 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.94 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.42 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.62 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.73 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.58 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.83 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.206 0.689 0.344 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.162 0.644 0.322 59 100.0 59 ERRCA SURFACE . . . . . . . . 3.847 0.721 0.360 55 100.0 55 ERRCA BURIED . . . . . . . . 2.197 0.638 0.319 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.260 0.693 0.347 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.281 0.651 0.326 293 100.0 293 ERRMC SURFACE . . . . . . . . 3.893 0.724 0.362 269 100.0 269 ERRMC BURIED . . . . . . . . 2.276 0.643 0.323 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.829 0.746 0.373 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 4.978 0.751 0.376 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.208 0.698 0.349 252 100.0 252 ERRSC SURFACE . . . . . . . . 5.932 0.772 0.386 204 100.0 204 ERRSC BURIED . . . . . . . . 3.348 0.711 0.356 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.975 0.715 0.358 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 2.718 0.672 0.336 488 100.0 488 ERRALL SURFACE . . . . . . . . 4.778 0.743 0.371 424 100.0 424 ERRALL BURIED . . . . . . . . 2.808 0.676 0.339 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 22 50 68 88 90 90 DISTCA CA (P) 1.11 24.44 55.56 75.56 97.78 90 DISTCA CA (RMS) 0.85 1.52 2.13 2.69 4.10 DISTCA ALL (N) 14 133 324 496 662 716 716 DISTALL ALL (P) 1.96 18.58 45.25 69.27 92.46 716 DISTALL ALL (RMS) 0.75 1.52 2.12 2.83 4.35 DISTALL END of the results output