####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS400_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS400_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 3.57 3.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 3 - 41 1.96 3.80 LCS_AVERAGE: 30.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 74 - 86 0.98 4.07 LCS_AVERAGE: 10.54 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 6 8 90 2 4 6 6 8 11 11 14 15 19 19 52 63 72 76 78 84 86 88 88 LCS_GDT T 2 T 2 6 8 90 0 4 9 15 19 27 38 56 64 74 79 83 84 85 87 89 89 89 89 89 LCS_GDT D 3 D 3 6 39 90 3 10 39 55 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT L 4 L 4 6 39 90 3 4 9 36 49 61 73 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 5 V 5 10 39 90 3 20 37 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 6 A 6 10 39 90 10 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 7 V 7 10 39 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT W 8 W 8 10 39 90 9 24 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT D 9 D 9 10 39 90 7 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 10 V 10 10 39 90 4 10 32 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 11 A 11 10 39 90 4 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT L 12 L 12 10 39 90 4 25 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT S 13 S 13 10 39 90 3 11 30 53 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT D 14 D 14 10 39 90 3 11 20 40 52 67 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 15 G 15 10 39 90 3 22 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 16 V 16 10 39 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT H 17 H 17 10 39 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 18 K 18 10 39 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 19 I 19 10 39 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 20 E 20 10 39 90 14 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT F 21 F 21 10 39 90 10 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 22 E 22 10 39 90 6 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT H 23 H 23 10 39 90 6 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 24 G 24 10 39 90 6 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 25 T 25 7 39 90 0 4 11 33 54 67 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 26 T 26 8 39 90 4 6 10 13 32 56 72 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT S 27 S 27 8 39 90 4 11 30 48 64 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 28 G 28 11 39 90 4 9 28 48 62 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 29 K 29 12 39 90 6 22 41 57 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT R 30 R 30 12 39 90 4 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 31 V 31 12 39 90 10 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 32 V 32 12 39 90 10 25 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT Y 33 Y 33 12 39 90 9 21 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 34 V 34 12 39 90 10 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT D 35 D 35 12 39 90 8 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 36 G 36 12 39 90 4 14 35 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 37 K 37 12 39 90 6 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 38 E 38 12 39 90 10 22 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 39 E 39 12 39 90 5 20 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 40 I 40 12 39 90 3 21 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT R 41 R 41 5 39 90 3 6 16 33 52 66 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 42 K 42 5 38 90 3 4 9 25 47 66 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 43 E 43 5 7 90 3 4 5 6 6 24 26 33 45 61 68 80 85 87 88 89 89 89 89 89 LCS_GDT W 44 W 44 3 6 90 3 3 4 6 6 12 15 20 30 48 62 74 84 87 88 89 89 89 89 89 LCS_GDT M 45 M 45 3 6 90 3 3 4 9 17 27 34 45 56 71 80 83 85 87 88 89 89 89 89 89 LCS_GDT F 46 F 46 3 6 90 3 3 4 6 19 28 39 51 64 78 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 47 K 47 3 6 90 3 7 20 34 52 67 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT L 48 L 48 3 8 90 3 6 8 13 17 19 26 30 57 78 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 49 V 49 3 21 90 4 12 25 40 61 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 50 G 50 6 21 90 10 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 51 K 51 6 21 90 5 21 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 52 E 52 6 21 90 6 21 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 53 T 53 6 21 90 5 23 41 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT F 54 F 54 6 21 90 5 6 27 55 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT Y 55 Y 55 6 21 90 5 17 36 55 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT V 56 V 56 6 21 90 6 21 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 57 G 57 6 21 90 3 9 22 34 44 58 68 75 77 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 58 A 58 12 21 90 3 17 38 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 59 A 59 12 21 90 3 23 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 60 K 60 12 21 90 9 18 36 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 61 T 61 12 21 90 9 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 62 K 62 12 21 90 11 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 63 A 63 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 64 T 64 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 65 I 65 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT N 66 N 66 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 67 I 67 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT D 68 D 68 12 21 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 69 A 69 12 21 90 6 22 41 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 70 I 70 6 21 90 1 6 14 17 27 49 55 71 73 77 82 83 85 87 88 89 89 89 89 89 LCS_GDT S 71 S 71 6 15 90 3 7 15 19 25 35 48 58 70 75 79 82 85 87 88 89 89 89 89 89 LCS_GDT G 72 G 72 6 16 90 3 13 24 32 49 61 72 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT F 73 F 73 10 18 90 3 6 33 52 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT A 74 A 74 13 18 90 11 24 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT Y 75 Y 75 13 18 90 13 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 76 E 76 13 18 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT Y 77 Y 77 13 18 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT T 78 T 78 13 18 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT L 79 L 79 13 18 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT E 80 E 80 13 18 90 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT I 81 I 81 13 18 90 14 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT N 82 N 82 13 18 90 4 21 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT G 83 G 83 13 18 90 12 27 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 84 K 84 13 18 90 5 22 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT S 85 S 85 13 18 90 4 23 39 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT L 86 L 86 13 18 90 5 10 29 51 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 87 K 87 11 18 90 5 9 22 40 61 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT K 88 K 88 10 18 90 5 8 20 28 44 59 69 75 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT Y 89 Y 89 5 18 90 3 4 10 28 38 58 69 75 78 80 82 83 85 87 88 89 89 89 89 89 LCS_GDT M 90 M 90 4 18 90 3 6 10 13 43 65 69 75 78 80 82 83 85 87 88 89 89 89 89 89 LCS_AVERAGE LCS_A: 46.85 ( 10.54 30.01 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 28 42 58 65 68 74 76 78 80 82 83 85 87 88 89 89 89 89 89 GDT PERCENT_AT 17.78 31.11 46.67 64.44 72.22 75.56 82.22 84.44 86.67 88.89 91.11 92.22 94.44 96.67 97.78 98.89 98.89 98.89 98.89 98.89 GDT RMS_LOCAL 0.34 0.69 0.98 1.30 1.44 1.57 1.94 2.06 2.16 2.28 2.44 2.56 2.82 3.08 3.22 3.31 3.31 3.31 3.31 3.31 GDT RMS_ALL_AT 3.75 3.87 3.96 3.93 3.92 3.85 3.68 3.65 3.66 3.65 3.66 3.63 3.60 3.59 3.59 3.58 3.58 3.58 3.58 3.58 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 13.158 0 0.473 0.974 15.942 0.357 0.179 LGA T 2 T 2 7.665 0 0.695 0.659 10.705 13.690 8.912 LGA D 3 D 3 2.634 0 0.187 1.122 6.887 56.548 41.310 LGA L 4 L 4 4.181 0 0.278 0.327 10.315 52.619 29.464 LGA V 5 V 5 2.209 0 0.668 0.987 6.771 70.833 48.027 LGA A 6 A 6 0.679 0 0.069 0.079 1.349 95.238 92.476 LGA V 7 V 7 0.631 0 0.058 0.050 1.041 88.214 89.184 LGA W 8 W 8 1.146 0 0.046 0.098 1.658 83.690 80.850 LGA D 9 D 9 1.491 0 0.073 0.962 4.524 75.119 62.262 LGA V 10 V 10 2.284 0 0.241 1.152 3.765 70.833 62.993 LGA A 11 A 11 1.752 0 0.633 0.592 2.818 75.000 71.429 LGA L 12 L 12 1.617 0 0.224 1.491 3.880 63.095 58.631 LGA S 13 S 13 1.947 0 0.558 0.750 3.782 65.595 58.175 LGA D 14 D 14 3.623 0 0.391 1.239 8.380 49.167 31.369 LGA G 15 G 15 1.620 0 0.411 0.411 1.620 77.143 77.143 LGA V 16 V 16 0.633 0 0.102 1.163 3.083 88.214 78.639 LGA H 17 H 17 0.430 0 0.114 1.118 2.839 95.357 85.714 LGA K 18 K 18 0.448 0 0.031 0.865 2.209 97.619 86.931 LGA I 19 I 19 0.348 0 0.110 0.236 1.464 100.000 95.298 LGA E 20 E 20 0.726 0 0.065 0.645 3.697 88.214 72.169 LGA F 21 F 21 0.648 0 0.056 0.977 5.413 92.857 66.494 LGA E 22 E 22 1.556 0 0.082 0.591 2.448 72.976 71.111 LGA H 23 H 23 1.609 0 0.158 1.353 6.650 79.405 53.381 LGA G 24 G 24 1.292 0 0.081 0.081 2.728 69.048 69.048 LGA T 25 T 25 3.423 0 0.704 0.957 7.623 50.119 37.143 LGA T 26 T 26 4.999 0 0.170 1.143 7.867 35.833 27.687 LGA S 27 S 27 2.119 0 0.091 0.111 2.937 69.048 73.254 LGA G 28 G 28 2.813 0 0.210 0.210 3.458 57.262 57.262 LGA K 29 K 29 1.874 0 0.284 0.970 6.297 65.119 54.180 LGA R 30 R 30 1.871 0 0.042 0.971 3.932 75.000 61.775 LGA V 31 V 31 1.719 0 0.060 1.200 3.978 75.000 67.619 LGA V 32 V 32 1.553 0 0.047 0.119 1.772 72.857 72.857 LGA Y 33 Y 33 1.882 0 0.600 0.755 3.725 63.452 61.865 LGA V 34 V 34 1.035 0 0.134 1.163 2.676 85.952 78.367 LGA D 35 D 35 0.648 0 0.044 0.894 2.864 85.952 77.679 LGA G 36 G 36 1.987 0 0.054 0.054 2.743 69.048 69.048 LGA K 37 K 37 1.247 0 0.029 0.844 5.190 81.429 63.968 LGA E 38 E 38 2.031 0 0.070 0.614 6.062 66.786 45.608 LGA E 39 E 39 2.136 0 0.602 0.675 4.161 55.952 61.799 LGA I 40 I 40 2.493 0 0.103 0.160 9.993 57.857 36.786 LGA R 41 R 41 4.268 0 0.632 1.206 16.404 44.643 18.052 LGA K 42 K 42 4.418 0 0.640 0.670 11.535 26.190 16.878 LGA E 43 E 43 10.271 0 0.421 1.416 17.503 1.786 0.794 LGA W 44 W 44 10.065 0 0.674 0.720 17.250 0.476 0.136 LGA M 45 M 45 8.708 0 0.060 1.278 9.462 3.452 4.167 LGA F 46 F 46 8.133 0 0.490 1.139 10.478 5.238 5.195 LGA K 47 K 47 4.127 0 0.638 1.014 6.269 27.976 31.746 LGA L 48 L 48 7.513 0 0.335 0.344 14.740 15.714 7.917 LGA V 49 V 49 3.114 0 0.628 1.358 4.905 51.071 47.823 LGA G 50 G 50 1.663 0 0.467 0.467 1.663 79.286 79.286 LGA K 51 K 51 1.958 0 0.375 0.830 6.644 70.833 49.894 LGA E 52 E 52 2.250 0 0.048 0.785 5.240 64.762 52.011 LGA T 53 T 53 2.062 0 0.052 0.073 2.403 64.762 68.231 LGA F 54 F 54 2.651 0 0.158 1.394 4.580 62.976 60.216 LGA Y 55 Y 55 2.814 0 0.100 0.271 3.885 57.143 47.937 LGA V 56 V 56 2.364 0 0.050 0.074 3.268 55.476 62.993 LGA G 57 G 57 5.361 0 0.668 0.668 5.361 40.714 40.714 LGA A 58 A 58 2.441 0 0.140 0.140 3.548 65.595 62.476 LGA A 59 A 59 1.489 0 0.116 0.120 2.177 81.548 78.190 LGA K 60 K 60 2.005 0 0.072 0.819 8.645 70.833 50.106 LGA T 61 T 61 1.424 0 0.039 0.095 1.785 79.286 78.980 LGA K 62 K 62 1.378 0 0.051 0.756 4.045 79.286 67.566 LGA A 63 A 63 0.592 0 0.132 0.139 1.365 88.214 88.667 LGA T 64 T 64 0.710 0 0.044 1.052 2.849 90.476 82.041 LGA I 65 I 65 0.584 0 0.054 0.533 2.725 90.476 87.500 LGA N 66 N 66 0.629 0 0.045 0.489 1.513 90.476 87.143 LGA I 67 I 67 0.752 0 0.043 0.080 1.190 90.476 89.345 LGA D 68 D 68 0.740 0 0.671 0.670 3.702 82.143 69.881 LGA A 69 A 69 1.748 0 0.121 0.209 6.238 50.714 55.143 LGA I 70 I 70 6.827 0 0.373 1.104 9.543 13.690 8.333 LGA S 71 S 71 8.290 0 0.156 0.725 11.057 9.643 6.429 LGA G 72 G 72 5.286 0 0.605 0.605 6.543 28.571 28.571 LGA F 73 F 73 2.443 0 0.230 0.410 6.890 66.786 41.775 LGA A 74 A 74 1.525 0 0.310 0.385 2.590 83.929 78.571 LGA Y 75 Y 75 1.341 0 0.082 1.502 11.931 79.286 38.135 LGA E 76 E 76 0.859 0 0.044 0.861 3.711 90.476 71.746 LGA Y 77 Y 77 0.752 0 0.030 0.311 1.013 90.476 90.516 LGA T 78 T 78 0.749 0 0.066 0.121 1.243 90.476 87.891 LGA L 79 L 79 0.522 0 0.116 0.130 0.777 95.238 95.238 LGA E 80 E 80 0.550 0 0.032 0.201 1.298 90.476 90.529 LGA I 81 I 81 0.708 0 0.186 0.181 1.268 88.333 88.274 LGA N 82 N 82 2.313 0 0.019 0.819 4.008 68.810 56.964 LGA G 83 G 83 0.755 0 0.152 0.152 1.112 85.952 85.952 LGA K 84 K 84 1.649 0 0.128 0.713 5.948 81.548 57.460 LGA S 85 S 85 1.365 0 0.171 0.547 2.263 77.143 75.794 LGA L 86 L 86 2.575 0 0.084 1.381 7.657 64.881 45.833 LGA K 87 K 87 3.298 0 0.171 1.112 4.096 48.333 47.090 LGA K 88 K 88 4.757 0 0.328 0.900 6.694 27.024 23.439 LGA Y 89 Y 89 4.965 0 0.083 0.299 5.396 38.929 37.897 LGA M 90 M 90 4.384 0 0.121 0.787 8.689 25.714 18.929 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 3.570 3.540 4.808 64.058 56.716 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 76 2.06 69.722 63.322 3.514 LGA_LOCAL RMSD: 2.063 Number of atoms: 76 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.650 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 3.570 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.898644 * X + -0.261791 * Y + 0.352000 * Z + 70.700989 Y_new = 0.430782 * X + -0.678196 * Y + 0.595380 * Z + 6.175242 Z_new = 0.082860 * X + 0.686670 * Y + 0.722232 * Z + -59.669106 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.694586 -0.082955 0.760162 [DEG: 154.3884 -4.7530 43.5541 ] ZXZ: 2.607655 0.763772 0.120088 [DEG: 149.4076 43.7609 6.8806 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS400_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS400_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 76 2.06 63.322 3.57 REMARK ---------------------------------------------------------- MOLECULE T0540TS400_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 25.836 12.232 7.354 1.00 0.00 N ATOM 2 CA MET 1 25.984 10.934 7.978 1.00 0.00 C ATOM 3 C MET 1 27.313 11.006 8.628 1.00 0.00 C ATOM 4 O MET 1 28.111 11.856 8.272 1.00 0.00 O ATOM 5 CB MET 1 25.883 9.811 6.932 1.00 0.00 C ATOM 6 CG MET 1 24.432 9.589 6.465 1.00 0.00 C ATOM 7 SD MET 1 24.230 8.324 5.183 1.00 0.00 S ATOM 8 CE MET 1 24.671 6.837 6.111 1.00 0.00 C ATOM 9 N THR 2 27.513 10.144 9.601 1.00 0.00 N ATOM 10 CA THR 2 28.854 9.872 9.989 1.00 0.00 C ATOM 11 C THR 2 29.279 8.604 9.248 1.00 0.00 C ATOM 12 O THR 2 28.431 7.782 8.913 1.00 0.00 O ATOM 13 CB THR 2 28.865 9.737 11.535 1.00 0.00 C ATOM 14 OG1 THR 2 28.048 8.680 12.029 1.00 0.00 O ATOM 15 CG2 THR 2 28.355 11.000 12.238 1.00 0.00 C ATOM 16 N ASP 3 30.555 8.478 8.896 1.00 0.00 N ATOM 17 CA ASP 3 31.777 9.256 9.169 1.00 0.00 C ATOM 18 C ASP 3 31.931 10.605 8.536 1.00 0.00 C ATOM 19 O ASP 3 32.896 11.277 8.869 1.00 0.00 O ATOM 20 CB ASP 3 32.975 8.385 8.708 1.00 0.00 C ATOM 21 CG ASP 3 32.909 7.924 7.251 1.00 0.00 C ATOM 22 OD1 ASP 3 31.839 8.111 6.621 1.00 0.00 O ATOM 23 OD2 ASP 3 33.889 7.291 6.810 1.00 0.00 O ATOM 24 N LEU 4 30.965 10.999 7.712 1.00 0.00 N ATOM 25 CA LEU 4 30.899 12.304 7.098 1.00 0.00 C ATOM 26 C LEU 4 32.076 12.416 6.128 1.00 0.00 C ATOM 27 O LEU 4 33.002 13.220 6.314 1.00 0.00 O ATOM 28 CB LEU 4 30.825 13.410 8.147 1.00 0.00 C ATOM 29 CG LEU 4 30.807 14.853 7.687 1.00 0.00 C ATOM 30 CD1 LEU 4 29.555 15.156 6.897 1.00 0.00 C ATOM 31 CD2 LEU 4 31.001 15.793 8.893 1.00 0.00 C ATOM 32 N VAL 5 32.067 11.545 5.119 1.00 0.00 N ATOM 33 CA VAL 5 32.961 11.719 4.014 1.00 0.00 C ATOM 34 C VAL 5 32.352 12.722 3.055 1.00 0.00 C ATOM 35 O VAL 5 31.168 12.657 2.743 1.00 0.00 O ATOM 36 CB VAL 5 33.255 10.388 3.264 1.00 0.00 C ATOM 37 CG1 VAL 5 34.206 10.560 2.064 1.00 0.00 C ATOM 38 CG2 VAL 5 33.924 9.396 4.213 1.00 0.00 C ATOM 39 N ALA 6 33.199 13.631 2.571 1.00 0.00 N ATOM 40 CA ALA 6 32.828 14.622 1.603 1.00 0.00 C ATOM 41 C ALA 6 33.970 14.797 0.653 1.00 0.00 C ATOM 42 O ALA 6 35.101 15.057 1.064 1.00 0.00 O ATOM 43 CB ALA 6 32.378 15.863 2.336 1.00 0.00 C ATOM 44 N VAL 7 33.654 14.639 -0.628 1.00 0.00 N ATOM 45 CA VAL 7 34.642 14.671 -1.662 1.00 0.00 C ATOM 46 C VAL 7 34.424 15.868 -2.529 1.00 0.00 C ATOM 47 O VAL 7 33.326 16.080 -2.985 1.00 0.00 O ATOM 48 CB VAL 7 34.644 13.374 -2.505 1.00 0.00 C ATOM 49 CG1 VAL 7 35.718 13.414 -3.615 1.00 0.00 C ATOM 50 CG2 VAL 7 34.919 12.134 -1.644 1.00 0.00 C ATOM 51 N TRP 8 35.474 16.588 -2.859 1.00 0.00 N ATOM 52 CA TRP 8 35.379 17.604 -3.858 1.00 0.00 C ATOM 53 C TRP 8 36.557 17.502 -4.791 1.00 0.00 C ATOM 54 O TRP 8 37.717 17.520 -4.374 1.00 0.00 O ATOM 55 CB TRP 8 35.251 18.969 -3.287 1.00 0.00 C ATOM 56 CG TRP 8 34.066 19.187 -2.431 1.00 0.00 C ATOM 57 CD1 TRP 8 32.847 19.643 -2.809 1.00 0.00 C ATOM 58 CD2 TRP 8 34.019 18.934 -1.024 1.00 0.00 C ATOM 59 NE1 TRP 8 32.021 19.634 -1.706 1.00 0.00 N ATOM 60 CE2 TRP 8 32.706 19.202 -0.604 1.00 0.00 C ATOM 61 CE3 TRP 8 34.929 18.422 -0.076 1.00 0.00 C ATOM 62 CZ2 TRP 8 32.321 18.982 0.706 1.00 0.00 C ATOM 63 CZ3 TRP 8 34.556 18.337 1.270 1.00 0.00 C ATOM 64 CH2 TRP 8 33.261 18.666 1.685 1.00 0.00 H ATOM 65 N ASP 9 36.235 17.403 -6.075 1.00 0.00 N ATOM 66 CA ASP 9 37.203 17.398 -7.138 1.00 0.00 C ATOM 67 C ASP 9 37.669 18.799 -7.440 1.00 0.00 C ATOM 68 O ASP 9 36.870 19.590 -7.910 1.00 0.00 O ATOM 69 CB ASP 9 36.542 16.746 -8.383 1.00 0.00 C ATOM 70 CG ASP 9 37.423 16.568 -9.607 1.00 0.00 C ATOM 71 OD1 ASP 9 38.505 17.186 -9.661 1.00 0.00 O ATOM 72 OD2 ASP 9 36.941 15.852 -10.512 1.00 0.00 O ATOM 73 N VAL 10 38.931 19.078 -7.150 1.00 0.00 N ATOM 74 CA VAL 10 39.525 20.360 -7.375 1.00 0.00 C ATOM 75 C VAL 10 40.342 20.364 -8.676 1.00 0.00 C ATOM 76 O VAL 10 41.350 19.686 -8.816 1.00 0.00 O ATOM 77 CB VAL 10 40.406 20.790 -6.207 1.00 0.00 C ATOM 78 CG1 VAL 10 41.124 22.133 -6.486 1.00 0.00 C ATOM 79 CG2 VAL 10 39.484 20.840 -4.995 1.00 0.00 C ATOM 80 N ALA 11 39.956 21.266 -9.578 1.00 0.00 N ATOM 81 CA ALA 11 40.502 21.363 -10.921 1.00 0.00 C ATOM 82 C ALA 11 41.788 22.130 -11.100 1.00 0.00 C ATOM 83 O ALA 11 42.256 22.234 -12.231 1.00 0.00 O ATOM 84 CB ALA 11 39.467 22.129 -11.767 1.00 0.00 C ATOM 85 N LEU 12 42.263 22.806 -10.061 1.00 0.00 N ATOM 86 CA LEU 12 43.315 23.795 -10.198 1.00 0.00 C ATOM 87 C LEU 12 44.603 23.245 -10.746 1.00 0.00 C ATOM 88 O LEU 12 45.230 22.391 -10.127 1.00 0.00 O ATOM 89 CB LEU 12 43.583 24.397 -8.846 1.00 0.00 C ATOM 90 CG LEU 12 44.691 25.443 -8.905 1.00 0.00 C ATOM 91 CD1 LEU 12 44.282 26.729 -9.655 1.00 0.00 C ATOM 92 CD2 LEU 12 45.037 25.685 -7.500 1.00 0.00 C ATOM 93 N SER 13 45.016 23.938 -11.796 1.00 0.00 N ATOM 94 CA SER 13 46.151 23.626 -12.590 1.00 0.00 C ATOM 95 C SER 13 45.698 22.696 -13.638 1.00 0.00 C ATOM 96 O SER 13 44.535 22.717 -14.045 1.00 0.00 O ATOM 97 CB SER 13 47.390 23.278 -11.703 1.00 0.00 C ATOM 98 OG SER 13 48.646 23.374 -12.339 1.00 0.00 O ATOM 99 N ASP 14 46.653 21.885 -14.030 1.00 0.00 N ATOM 100 CA ASP 14 46.262 20.743 -14.740 1.00 0.00 C ATOM 101 C ASP 14 45.820 19.627 -13.854 1.00 0.00 C ATOM 102 O ASP 14 44.670 19.209 -13.890 1.00 0.00 O ATOM 103 CB ASP 14 47.416 20.212 -15.640 1.00 0.00 C ATOM 104 CG ASP 14 47.807 21.092 -16.820 1.00 0.00 C ATOM 105 OD1 ASP 14 47.058 22.051 -17.134 1.00 0.00 O ATOM 106 OD2 ASP 14 48.888 20.807 -17.374 1.00 0.00 O ATOM 107 N GLY 15 46.808 19.192 -13.063 1.00 0.00 N ATOM 108 CA GLY 15 46.717 18.502 -11.799 1.00 0.00 C ATOM 109 C GLY 15 45.388 18.574 -11.142 1.00 0.00 C ATOM 110 O GLY 15 45.146 19.470 -10.335 1.00 0.00 O ATOM 111 N VAL 16 44.540 17.619 -11.506 1.00 0.00 N ATOM 112 CA VAL 16 43.325 17.431 -10.786 1.00 0.00 C ATOM 113 C VAL 16 43.725 16.932 -9.407 1.00 0.00 C ATOM 114 O VAL 16 44.481 15.976 -9.277 1.00 0.00 O ATOM 115 CB VAL 16 42.382 16.404 -11.460 1.00 0.00 C ATOM 116 CG1 VAL 16 41.131 16.205 -10.590 1.00 0.00 C ATOM 117 CG2 VAL 16 41.935 16.878 -12.852 1.00 0.00 C ATOM 118 N HIS 17 43.211 17.639 -8.410 1.00 0.00 N ATOM 119 CA HIS 17 43.482 17.361 -7.038 1.00 0.00 C ATOM 120 C HIS 17 42.183 16.948 -6.426 1.00 0.00 C ATOM 121 O HIS 17 41.178 17.655 -6.519 1.00 0.00 O ATOM 122 CB HIS 17 44.042 18.626 -6.333 1.00 0.00 C ATOM 123 CG HIS 17 45.380 19.079 -6.846 1.00 0.00 C ATOM 124 ND1 HIS 17 46.532 18.300 -6.724 1.00 0.00 N ATOM 125 CD2 HIS 17 45.733 20.260 -7.466 1.00 0.00 C ATOM 126 CE1 HIS 17 47.481 18.945 -7.386 1.00 0.00 C ATOM 127 NE2 HIS 17 47.067 20.137 -7.807 1.00 0.00 N ATOM 128 N LYS 18 42.191 15.796 -5.784 1.00 0.00 N ATOM 129 CA LYS 18 41.006 15.313 -5.140 1.00 0.00 C ATOM 130 C LYS 18 41.141 15.592 -3.678 1.00 0.00 C ATOM 131 O LYS 18 42.092 15.131 -3.042 1.00 0.00 O ATOM 132 CB LYS 18 40.892 13.796 -5.371 1.00 0.00 C ATOM 133 CG LYS 18 39.584 13.195 -4.847 1.00 0.00 C ATOM 134 CD LYS 18 39.482 11.689 -5.121 1.00 0.00 C ATOM 135 CE LYS 18 38.196 11.099 -4.534 1.00 0.00 C ATOM 136 NZ LYS 18 38.125 9.638 -4.708 1.00 0.00 N ATOM 137 N ILE 19 40.181 16.346 -3.167 1.00 0.00 N ATOM 138 CA ILE 19 40.141 16.767 -1.806 1.00 0.00 C ATOM 139 C ILE 19 38.986 16.003 -1.180 1.00 0.00 C ATOM 140 O ILE 19 37.830 16.270 -1.474 1.00 0.00 O ATOM 141 CB ILE 19 40.039 18.278 -1.838 1.00 0.00 C ATOM 142 CG1 ILE 19 41.237 18.999 -2.490 1.00 0.00 C ATOM 143 CG2 ILE 19 40.023 18.694 -0.429 1.00 0.00 C ATOM 144 CD1 ILE 19 41.115 20.529 -2.350 1.00 0.00 C ATOM 145 N GLU 20 39.356 15.055 -0.330 1.00 0.00 N ATOM 146 CA GLU 20 38.426 14.288 0.451 1.00 0.00 C ATOM 147 C GLU 20 38.575 14.741 1.888 1.00 0.00 C ATOM 148 O GLU 20 39.669 14.756 2.450 1.00 0.00 O ATOM 149 CB GLU 20 38.642 12.794 0.179 1.00 0.00 C ATOM 150 CG GLU 20 37.643 11.835 0.847 1.00 0.00 C ATOM 151 CD GLU 20 37.742 10.415 0.253 1.00 0.00 C ATOM 152 OE1 GLU 20 38.413 10.254 -0.800 1.00 0.00 O ATOM 153 OE2 GLU 20 37.054 9.530 0.777 1.00 0.00 O ATOM 154 N PHE 21 37.486 15.243 2.434 1.00 0.00 N ATOM 155 CA PHE 21 37.417 15.670 3.805 1.00 0.00 C ATOM 156 C PHE 21 36.753 14.517 4.525 1.00 0.00 C ATOM 157 O PHE 21 35.612 14.173 4.202 1.00 0.00 O ATOM 158 CB PHE 21 36.524 16.908 3.857 1.00 0.00 C ATOM 159 CG PHE 21 37.152 18.288 3.493 1.00 0.00 C ATOM 160 CD1 PHE 21 38.019 18.355 2.405 1.00 0.00 C ATOM 161 CD2 PHE 21 36.989 19.500 4.235 1.00 0.00 C ATOM 162 CE1 PHE 21 38.723 19.546 2.161 1.00 0.00 C ATOM 163 CE2 PHE 21 37.714 20.665 3.987 1.00 0.00 C ATOM 164 CZ PHE 21 38.600 20.676 2.923 1.00 0.00 C ATOM 165 N GLU 22 37.451 13.972 5.520 1.00 0.00 N ATOM 166 CA GLU 22 36.865 13.036 6.439 1.00 0.00 C ATOM 167 C GLU 22 36.675 13.711 7.748 1.00 0.00 C ATOM 168 O GLU 22 37.639 14.163 8.373 1.00 0.00 O ATOM 169 CB GLU 22 37.756 11.792 6.643 1.00 0.00 C ATOM 170 CG GLU 22 37.108 10.690 7.521 1.00 0.00 C ATOM 171 CD GLU 22 38.068 9.557 7.890 1.00 0.00 C ATOM 172 OE1 GLU 22 39.219 9.565 7.419 1.00 0.00 O ATOM 173 OE2 GLU 22 37.661 8.747 8.770 1.00 0.00 O ATOM 174 N HIS 23 35.407 13.881 8.087 1.00 0.00 N ATOM 175 CA HIS 23 35.009 14.750 9.143 1.00 0.00 C ATOM 176 C HIS 23 34.336 13.953 10.211 1.00 0.00 C ATOM 177 O HIS 23 33.147 13.725 10.203 1.00 0.00 O ATOM 178 CB HIS 23 34.141 15.850 8.618 1.00 0.00 C ATOM 179 CG HIS 23 34.794 16.763 7.685 1.00 0.00 C ATOM 180 ND1 HIS 23 34.036 17.757 7.097 1.00 0.00 N ATOM 181 CD2 HIS 23 36.114 16.913 7.347 1.00 0.00 C ATOM 182 CE1 HIS 23 34.907 18.471 6.430 1.00 0.00 C ATOM 183 NE2 HIS 23 36.162 18.095 6.668 1.00 0.00 N ATOM 184 N GLY 24 35.003 13.804 11.338 1.00 0.00 N ATOM 185 CA GLY 24 34.177 13.714 12.507 1.00 0.00 C ATOM 186 C GLY 24 33.982 15.146 12.959 1.00 0.00 C ATOM 187 O GLY 24 34.836 15.761 13.600 1.00 0.00 O ATOM 188 N THR 25 32.863 15.706 12.517 1.00 0.00 N ATOM 189 CA THR 25 32.388 17.017 12.858 1.00 0.00 C ATOM 190 C THR 25 30.962 16.769 13.411 1.00 0.00 C ATOM 191 O THR 25 30.216 15.999 12.817 1.00 0.00 O ATOM 192 CB THR 25 32.441 17.982 11.677 1.00 0.00 C ATOM 193 OG1 THR 25 33.798 18.129 11.393 1.00 0.00 O ATOM 194 CG2 THR 25 31.989 19.416 11.989 1.00 0.00 C ATOM 195 N THR 26 30.534 17.329 14.543 1.00 0.00 N ATOM 196 CA THR 26 30.960 18.516 15.281 1.00 0.00 C ATOM 197 C THR 26 32.273 18.467 16.024 1.00 0.00 C ATOM 198 O THR 26 32.785 19.538 16.374 1.00 0.00 O ATOM 199 CB THR 26 29.848 18.803 16.334 1.00 0.00 C ATOM 200 OG1 THR 26 29.612 17.646 17.140 1.00 0.00 O ATOM 201 CG2 THR 26 28.514 19.227 15.720 1.00 0.00 C ATOM 202 N SER 27 32.807 17.276 16.303 1.00 0.00 N ATOM 203 CA SER 27 33.889 17.144 17.255 1.00 0.00 C ATOM 204 C SER 27 35.175 17.830 16.894 1.00 0.00 C ATOM 205 O SER 27 35.940 18.238 17.763 1.00 0.00 O ATOM 206 CB SER 27 34.153 15.642 17.548 1.00 0.00 C ATOM 207 OG SER 27 34.601 14.940 16.399 1.00 0.00 O ATOM 208 N GLY 28 35.390 17.927 15.587 1.00 0.00 N ATOM 209 CA GLY 28 36.472 18.699 15.102 1.00 0.00 C ATOM 210 C GLY 28 37.691 17.876 14.855 1.00 0.00 C ATOM 211 O GLY 28 38.788 18.254 15.254 1.00 0.00 O ATOM 212 N LYS 29 37.465 16.737 14.227 1.00 0.00 N ATOM 213 CA LYS 29 38.548 15.922 13.791 1.00 0.00 C ATOM 214 C LYS 29 38.446 15.714 12.323 1.00 0.00 C ATOM 215 O LYS 29 38.050 14.653 11.853 1.00 0.00 O ATOM 216 CB LYS 29 38.522 14.549 14.492 1.00 0.00 C ATOM 217 CG LYS 29 38.617 14.594 16.015 1.00 0.00 C ATOM 218 CD LYS 29 38.688 13.169 16.587 1.00 0.00 C ATOM 219 CE LYS 29 38.756 13.181 18.109 1.00 0.00 C ATOM 220 NZ LYS 29 38.815 11.810 18.642 1.00 0.00 N ATOM 221 N ARG 30 38.758 16.776 11.627 1.00 0.00 N ATOM 222 CA ARG 30 38.703 16.724 10.215 1.00 0.00 C ATOM 223 C ARG 30 40.098 16.601 9.693 1.00 0.00 C ATOM 224 O ARG 30 40.975 17.385 10.059 1.00 0.00 O ATOM 225 CB ARG 30 38.043 17.975 9.713 1.00 0.00 C ATOM 226 CG ARG 30 36.589 17.978 10.225 1.00 0.00 C ATOM 227 CD ARG 30 35.893 19.147 9.629 1.00 0.00 C ATOM 228 NE ARG 30 36.518 20.299 10.175 1.00 0.00 N ATOM 229 CZ ARG 30 36.022 20.997 11.185 1.00 0.00 C ATOM 230 NH1 ARG 30 36.545 22.192 11.370 1.00 0.00 H ATOM 231 NH2 ARG 30 35.070 20.506 11.983 1.00 0.00 H ATOM 232 N VAL 31 40.270 15.591 8.849 1.00 0.00 N ATOM 233 CA VAL 31 41.422 15.459 8.022 1.00 0.00 C ATOM 234 C VAL 31 41.005 15.724 6.595 1.00 0.00 C ATOM 235 O VAL 31 39.956 15.268 6.153 1.00 0.00 O ATOM 236 CB VAL 31 42.089 14.072 8.231 1.00 0.00 C ATOM 237 CG1 VAL 31 41.164 12.869 7.957 1.00 0.00 C ATOM 238 CG2 VAL 31 43.386 13.894 7.414 1.00 0.00 C ATOM 239 N VAL 32 41.845 16.515 5.921 1.00 0.00 N ATOM 240 CA VAL 32 41.663 16.752 4.527 1.00 0.00 C ATOM 241 C VAL 32 42.747 16.009 3.725 1.00 0.00 C ATOM 242 O VAL 32 43.942 16.269 3.870 1.00 0.00 O ATOM 243 CB VAL 32 41.644 18.238 4.196 1.00 0.00 C ATOM 244 CG1 VAL 32 41.570 18.466 2.689 1.00 0.00 C ATOM 245 CG2 VAL 32 40.401 18.835 4.865 1.00 0.00 C ATOM 246 N TYR 33 42.309 15.130 2.821 1.00 0.00 N ATOM 247 CA TYR 33 43.086 14.123 2.123 1.00 0.00 C ATOM 248 C TYR 33 43.749 14.485 0.796 1.00 0.00 C ATOM 249 O TYR 33 44.113 13.576 0.052 1.00 0.00 O ATOM 250 CB TYR 33 42.132 12.968 1.769 1.00 0.00 C ATOM 251 CG TYR 33 41.797 12.091 2.931 1.00 0.00 C ATOM 252 CD1 TYR 33 40.463 11.761 3.217 1.00 0.00 C ATOM 253 CD2 TYR 33 42.853 11.469 3.622 1.00 0.00 C ATOM 254 CE1 TYR 33 40.186 10.745 4.162 1.00 0.00 C ATOM 255 CE2 TYR 33 42.572 10.510 4.591 1.00 0.00 C ATOM 256 CZ TYR 33 41.250 10.119 4.837 1.00 0.00 C ATOM 257 OH TYR 33 41.071 9.052 5.666 1.00 0.00 H ATOM 258 N VAL 34 43.858 15.776 0.453 1.00 0.00 N ATOM 259 CA VAL 34 44.323 16.233 -0.856 1.00 0.00 C ATOM 260 C VAL 34 45.442 15.422 -1.521 1.00 0.00 C ATOM 261 O VAL 34 46.590 15.461 -1.103 1.00 0.00 O ATOM 262 CB VAL 34 44.707 17.751 -0.841 1.00 0.00 C ATOM 263 CG1 VAL 34 45.897 18.078 0.096 1.00 0.00 C ATOM 264 CG2 VAL 34 45.006 18.275 -2.263 1.00 0.00 C ATOM 265 N ASP 35 45.092 14.709 -2.577 1.00 0.00 N ATOM 266 CA ASP 35 46.054 14.130 -3.496 1.00 0.00 C ATOM 267 C ASP 35 47.090 13.182 -2.901 1.00 0.00 C ATOM 268 O ASP 35 48.285 13.204 -3.211 1.00 0.00 O ATOM 269 CB ASP 35 46.737 15.215 -4.392 1.00 0.00 C ATOM 270 CG ASP 35 47.445 14.657 -5.634 1.00 0.00 C ATOM 271 OD1 ASP 35 46.913 13.681 -6.204 1.00 0.00 O ATOM 272 OD2 ASP 35 48.498 15.228 -5.994 1.00 0.00 O ATOM 273 N GLY 36 46.666 12.408 -1.905 1.00 0.00 N ATOM 274 CA GLY 36 47.589 11.499 -1.286 1.00 0.00 C ATOM 275 C GLY 36 48.438 12.111 -0.212 1.00 0.00 C ATOM 276 O GLY 36 49.376 11.488 0.288 1.00 0.00 O ATOM 277 N LYS 37 48.131 13.357 0.116 1.00 0.00 N ATOM 278 CA LYS 37 48.740 14.079 1.162 1.00 0.00 C ATOM 279 C LYS 37 47.692 14.335 2.224 1.00 0.00 C ATOM 280 O LYS 37 46.629 14.886 1.941 1.00 0.00 O ATOM 281 CB LYS 37 49.314 15.418 0.665 1.00 0.00 C ATOM 282 CG LYS 37 50.380 15.225 -0.415 1.00 0.00 C ATOM 283 CD LYS 37 50.975 16.552 -0.858 1.00 0.00 C ATOM 284 CE LYS 37 51.990 16.354 -1.978 1.00 0.00 C ATOM 285 NZ LYS 37 52.534 17.642 -2.406 1.00 0.00 N ATOM 286 N GLU 38 48.016 13.940 3.443 1.00 0.00 N ATOM 287 CA GLU 38 47.124 14.143 4.542 1.00 0.00 C ATOM 288 C GLU 38 47.439 15.466 5.181 1.00 0.00 C ATOM 289 O GLU 38 48.491 15.664 5.793 1.00 0.00 O ATOM 290 CB GLU 38 47.316 13.040 5.593 1.00 0.00 C ATOM 291 CG GLU 38 46.889 11.642 5.098 1.00 0.00 C ATOM 292 CD GLU 38 47.010 10.572 6.184 1.00 0.00 C ATOM 293 OE1 GLU 38 47.588 10.876 7.244 1.00 0.00 O ATOM 294 OE2 GLU 38 46.527 9.454 5.915 1.00 0.00 O ATOM 295 N GLU 39 46.491 16.375 5.019 1.00 0.00 N ATOM 296 CA GLU 39 46.618 17.714 5.472 1.00 0.00 C ATOM 297 C GLU 39 45.585 17.955 6.525 1.00 0.00 C ATOM 298 O GLU 39 44.375 17.987 6.271 1.00 0.00 O ATOM 299 CB GLU 39 46.451 18.684 4.284 1.00 0.00 C ATOM 300 CG GLU 39 47.566 18.592 3.221 1.00 0.00 C ATOM 301 CD GLU 39 48.936 19.113 3.660 1.00 0.00 C ATOM 302 OE1 GLU 39 48.976 19.890 4.647 1.00 0.00 O ATOM 303 OE2 GLU 39 49.915 18.810 2.948 1.00 0.00 O ATOM 304 N ILE 40 46.086 18.166 7.726 1.00 0.00 N ATOM 305 CA ILE 40 45.277 18.565 8.831 1.00 0.00 C ATOM 306 C ILE 40 45.747 19.928 9.250 1.00 0.00 C ATOM 307 O ILE 40 46.900 20.147 9.643 1.00 0.00 O ATOM 308 CB ILE 40 45.381 17.555 10.014 1.00 0.00 C ATOM 309 CG1 ILE 40 44.956 16.155 9.547 1.00 0.00 C ATOM 310 CG2 ILE 40 44.496 17.987 11.210 1.00 0.00 C ATOM 311 CD1 ILE 40 45.135 15.012 10.554 1.00 0.00 C ATOM 312 N ARG 41 44.808 20.862 9.173 1.00 0.00 N ATOM 313 CA ARG 41 45.105 22.255 9.264 1.00 0.00 C ATOM 314 C ARG 41 45.471 22.732 10.632 1.00 0.00 C ATOM 315 O ARG 41 46.321 23.598 10.763 1.00 0.00 O ATOM 316 CB ARG 41 43.930 23.073 8.678 1.00 0.00 C ATOM 317 CG ARG 41 44.124 24.599 8.642 1.00 0.00 C ATOM 318 CD ARG 41 45.341 25.063 7.846 1.00 0.00 C ATOM 319 NE ARG 41 45.549 26.513 7.989 1.00 0.00 N ATOM 320 CZ ARG 41 46.654 27.169 7.630 1.00 0.00 C ATOM 321 NH1 ARG 41 46.727 28.486 7.852 1.00 0.00 H ATOM 322 NH2 ARG 41 47.672 26.497 7.078 1.00 0.00 H ATOM 323 N LYS 42 44.688 22.281 11.607 1.00 0.00 N ATOM 324 CA LYS 42 44.682 22.772 12.963 1.00 0.00 C ATOM 325 C LYS 42 43.924 24.059 13.144 1.00 0.00 C ATOM 326 O LYS 42 43.256 24.282 14.144 1.00 0.00 O ATOM 327 CB LYS 42 46.098 22.841 13.600 1.00 0.00 C ATOM 328 CG LYS 42 46.844 21.501 13.580 1.00 0.00 C ATOM 329 CD LYS 42 48.277 21.652 14.087 1.00 0.00 C ATOM 330 CE LYS 42 49.021 20.305 14.073 1.00 0.00 C ATOM 331 NZ LYS 42 50.411 20.470 14.534 1.00 0.00 N ATOM 332 N GLU 43 43.997 24.854 12.093 1.00 0.00 N ATOM 333 CA GLU 43 43.256 26.055 11.934 1.00 0.00 C ATOM 334 C GLU 43 42.036 25.850 11.106 1.00 0.00 C ATOM 335 O GLU 43 41.824 26.468 10.063 1.00 0.00 O ATOM 336 CB GLU 43 44.126 27.191 11.363 1.00 0.00 C ATOM 337 CG GLU 43 45.390 27.509 12.188 1.00 0.00 C ATOM 338 CD GLU 43 46.198 28.645 11.550 1.00 0.00 C ATOM 339 OE1 GLU 43 45.928 28.981 10.367 1.00 0.00 O ATOM 340 OE2 GLU 43 47.116 29.126 12.244 1.00 0.00 O ATOM 341 N TRP 44 41.256 24.917 11.605 1.00 0.00 N ATOM 342 CA TRP 44 40.190 24.400 10.820 1.00 0.00 C ATOM 343 C TRP 44 38.991 25.254 10.755 1.00 0.00 C ATOM 344 O TRP 44 38.218 25.072 9.828 1.00 0.00 O ATOM 345 CB TRP 44 39.776 23.038 11.355 1.00 0.00 C ATOM 346 CG TRP 44 40.695 21.970 10.943 1.00 0.00 C ATOM 347 CD1 TRP 44 41.522 21.267 11.743 1.00 0.00 C ATOM 348 CD2 TRP 44 40.889 21.498 9.589 1.00 0.00 C ATOM 349 NE1 TRP 44 42.168 20.325 10.972 1.00 0.00 N ATOM 350 CE2 TRP 44 41.767 20.391 9.660 1.00 0.00 C ATOM 351 CE3 TRP 44 40.368 21.840 8.315 1.00 0.00 C ATOM 352 CZ2 TRP 44 42.049 19.642 8.533 1.00 0.00 C ATOM 353 CZ3 TRP 44 40.869 21.231 7.147 1.00 0.00 C ATOM 354 CH2 TRP 44 41.780 20.160 7.267 1.00 0.00 H ATOM 355 N MET 45 38.860 26.114 11.744 1.00 0.00 N ATOM 356 CA MET 45 37.676 26.857 12.055 1.00 0.00 C ATOM 357 C MET 45 36.872 26.158 13.009 1.00 0.00 C ATOM 358 O MET 45 36.884 24.927 13.021 1.00 0.00 O ATOM 359 CB MET 45 36.876 27.309 10.798 1.00 0.00 C ATOM 360 CG MET 45 35.825 28.399 10.993 1.00 0.00 C ATOM 361 SD MET 45 36.437 30.022 11.490 1.00 0.00 S ATOM 362 CE MET 45 37.379 30.419 9.984 1.00 0.00 C ATOM 363 N PHE 46 36.074 27.020 13.629 1.00 0.00 N ATOM 364 CA PHE 46 34.710 26.714 13.812 1.00 0.00 C ATOM 365 C PHE 46 34.039 27.803 14.515 1.00 0.00 C ATOM 366 O PHE 46 34.328 29.001 14.439 1.00 0.00 O ATOM 367 CB PHE 46 34.735 25.342 14.709 1.00 0.00 C ATOM 368 CG PHE 46 33.493 24.565 15.055 1.00 0.00 C ATOM 369 CD1 PHE 46 32.790 23.896 14.039 1.00 0.00 C ATOM 370 CD2 PHE 46 33.034 24.561 16.376 1.00 0.00 C ATOM 371 CE1 PHE 46 31.561 23.294 14.345 1.00 0.00 C ATOM 372 CE2 PHE 46 31.766 24.017 16.667 1.00 0.00 C ATOM 373 CZ PHE 46 31.035 23.385 15.647 1.00 0.00 C ATOM 374 N LYS 47 33.081 27.233 15.175 1.00 0.00 N ATOM 375 CA LYS 47 32.191 27.651 16.151 1.00 0.00 C ATOM 376 C LYS 47 30.985 28.232 15.609 1.00 0.00 C ATOM 377 O LYS 47 29.941 28.230 16.244 1.00 0.00 O ATOM 378 CB LYS 47 32.852 28.599 17.179 1.00 0.00 C ATOM 379 CG LYS 47 33.966 27.953 18.014 1.00 0.00 C ATOM 380 CD LYS 47 34.633 28.955 18.953 1.00 0.00 C ATOM 381 CE LYS 47 35.747 28.309 19.787 1.00 0.00 C ATOM 382 NZ LYS 47 36.389 29.294 20.670 1.00 0.00 N ATOM 383 N LEU 48 31.244 28.830 14.464 1.00 0.00 N ATOM 384 CA LEU 48 30.278 29.593 13.903 1.00 0.00 C ATOM 385 C LEU 48 29.185 28.835 13.233 1.00 0.00 C ATOM 386 O LEU 48 28.363 28.163 13.842 1.00 0.00 O ATOM 387 CB LEU 48 30.762 30.813 13.049 1.00 0.00 C ATOM 388 CG LEU 48 31.436 31.983 13.792 1.00 0.00 C ATOM 389 CD1 LEU 48 31.766 33.077 12.770 1.00 0.00 C ATOM 390 CD2 LEU 48 30.547 32.584 14.906 1.00 0.00 C ATOM 391 N VAL 49 29.247 28.960 11.923 1.00 0.00 N ATOM 392 CA VAL 49 28.588 28.021 11.108 1.00 0.00 C ATOM 393 C VAL 49 29.246 26.675 11.122 1.00 0.00 C ATOM 394 O VAL 49 28.655 25.613 10.955 1.00 0.00 O ATOM 395 CB VAL 49 28.363 28.678 9.720 1.00 0.00 C ATOM 396 CG1 VAL 49 27.411 27.857 8.853 1.00 0.00 C ATOM 397 CG2 VAL 49 27.750 30.093 9.836 1.00 0.00 C ATOM 398 N GLY 50 30.524 26.837 11.348 1.00 0.00 N ATOM 399 CA GLY 50 31.406 26.014 10.710 1.00 0.00 C ATOM 400 C GLY 50 31.805 26.504 9.351 1.00 0.00 C ATOM 401 O GLY 50 31.257 26.065 8.345 1.00 0.00 O ATOM 402 N LYS 51 32.757 27.427 9.330 1.00 0.00 N ATOM 403 CA LYS 51 33.225 27.905 8.058 1.00 0.00 C ATOM 404 C LYS 51 34.673 27.592 7.762 1.00 0.00 C ATOM 405 O LYS 51 35.552 28.453 7.870 1.00 0.00 O ATOM 406 CB LYS 51 33.060 29.440 7.938 1.00 0.00 C ATOM 407 CG LYS 51 31.613 29.905 7.817 1.00 0.00 C ATOM 408 CD LYS 51 31.529 31.420 7.592 1.00 0.00 C ATOM 409 CE LYS 51 30.073 31.881 7.507 1.00 0.00 C ATOM 410 NZ LYS 51 29.983 33.336 7.293 1.00 0.00 N ATOM 411 N GLU 52 34.959 26.348 7.443 1.00 0.00 N ATOM 412 CA GLU 52 36.306 25.855 7.470 1.00 0.00 C ATOM 413 C GLU 52 37.036 26.362 6.239 1.00 0.00 C ATOM 414 O GLU 52 36.470 26.594 5.175 1.00 0.00 O ATOM 415 CB GLU 52 36.284 24.359 7.412 1.00 0.00 C ATOM 416 CG GLU 52 35.516 23.872 8.618 1.00 0.00 C ATOM 417 CD GLU 52 35.404 22.396 8.559 1.00 0.00 C ATOM 418 OE1 GLU 52 36.351 21.750 8.063 1.00 0.00 O ATOM 419 OE2 GLU 52 34.574 21.926 9.352 1.00 0.00 O ATOM 420 N THR 53 38.331 26.526 6.400 1.00 0.00 N ATOM 421 CA THR 53 39.118 26.963 5.297 1.00 0.00 C ATOM 422 C THR 53 40.223 25.966 5.082 1.00 0.00 C ATOM 423 O THR 53 40.976 25.663 6.017 1.00 0.00 O ATOM 424 CB THR 53 39.670 28.394 5.537 1.00 0.00 C ATOM 425 OG1 THR 53 38.614 29.315 5.709 1.00 0.00 O ATOM 426 CG2 THR 53 40.481 28.924 4.331 1.00 0.00 C ATOM 427 N PHE 54 40.355 25.528 3.842 1.00 0.00 N ATOM 428 CA PHE 54 41.465 24.746 3.419 1.00 0.00 C ATOM 429 C PHE 54 42.377 25.564 2.536 1.00 0.00 C ATOM 430 O PHE 54 41.971 26.364 1.700 1.00 0.00 O ATOM 431 CB PHE 54 41.005 23.480 2.721 1.00 0.00 C ATOM 432 CG PHE 54 42.075 22.479 2.388 1.00 0.00 C ATOM 433 CD1 PHE 54 42.979 22.039 3.376 1.00 0.00 C ATOM 434 CD2 PHE 54 42.148 21.978 1.076 1.00 0.00 C ATOM 435 CE1 PHE 54 44.018 21.163 3.024 1.00 0.00 C ATOM 436 CE2 PHE 54 43.140 21.021 0.758 1.00 0.00 C ATOM 437 CZ PHE 54 44.094 20.668 1.719 1.00 0.00 C ATOM 438 N TYR 55 43.658 25.356 2.789 1.00 0.00 N ATOM 439 CA TYR 55 44.670 26.012 2.032 1.00 0.00 C ATOM 440 C TYR 55 45.396 24.995 1.188 1.00 0.00 C ATOM 441 O TYR 55 46.111 24.156 1.724 1.00 0.00 O ATOM 442 CB TYR 55 45.663 26.716 2.975 1.00 0.00 C ATOM 443 CG TYR 55 45.048 27.886 3.751 1.00 0.00 C ATOM 444 CD1 TYR 55 44.391 27.650 4.971 1.00 0.00 C ATOM 445 CD2 TYR 55 45.100 29.187 3.220 1.00 0.00 C ATOM 446 CE1 TYR 55 43.786 28.716 5.662 1.00 0.00 C ATOM 447 CE2 TYR 55 44.499 30.258 3.918 1.00 0.00 C ATOM 448 CZ TYR 55 43.839 30.016 5.146 1.00 0.00 C ATOM 449 OH TYR 55 43.241 31.031 5.818 1.00 0.00 H ATOM 450 N VAL 56 45.242 25.114 -0.137 1.00 0.00 N ATOM 451 CA VAL 56 45.902 24.232 -1.061 1.00 0.00 C ATOM 452 C VAL 56 47.126 24.970 -1.643 1.00 0.00 C ATOM 453 O VAL 56 47.007 25.974 -2.357 1.00 0.00 O ATOM 454 CB VAL 56 44.961 23.815 -2.225 1.00 0.00 C ATOM 455 CG1 VAL 56 45.642 22.823 -3.193 1.00 0.00 C ATOM 456 CG2 VAL 56 43.728 23.130 -1.654 1.00 0.00 C ATOM 457 N GLY 57 48.327 24.469 -1.345 1.00 0.00 N ATOM 458 CA GLY 57 49.524 25.298 -1.351 1.00 0.00 C ATOM 459 C GLY 57 50.271 25.477 -2.638 1.00 0.00 C ATOM 460 O GLY 57 51.038 26.444 -2.715 1.00 0.00 O ATOM 461 N ALA 58 50.061 24.600 -3.613 1.00 0.00 N ATOM 462 CA ALA 58 50.916 24.613 -4.788 1.00 0.00 C ATOM 463 C ALA 58 50.758 25.883 -5.619 1.00 0.00 C ATOM 464 O ALA 58 51.714 26.622 -5.850 1.00 0.00 O ATOM 465 CB ALA 58 50.651 23.400 -5.694 1.00 0.00 C ATOM 466 N ALA 59 49.507 26.173 -5.969 1.00 0.00 N ATOM 467 CA ALA 59 49.142 27.435 -6.596 1.00 0.00 C ATOM 468 C ALA 59 48.972 28.565 -5.617 1.00 0.00 C ATOM 469 O ALA 59 49.002 29.723 -6.005 1.00 0.00 O ATOM 470 CB ALA 59 47.844 27.256 -7.311 1.00 0.00 C ATOM 471 N LYS 60 48.742 28.170 -4.376 1.00 0.00 N ATOM 472 CA LYS 60 48.286 29.011 -3.311 1.00 0.00 C ATOM 473 C LYS 60 46.837 29.361 -3.474 1.00 0.00 C ATOM 474 O LYS 60 46.413 30.484 -3.168 1.00 0.00 O ATOM 475 CB LYS 60 49.191 30.258 -3.118 1.00 0.00 C ATOM 476 CG LYS 60 50.675 29.931 -2.948 1.00 0.00 C ATOM 477 CD LYS 60 51.542 31.201 -2.922 1.00 0.00 C ATOM 478 CE LYS 60 53.026 30.873 -2.738 1.00 0.00 C ATOM 479 NZ LYS 60 53.846 32.095 -2.733 1.00 0.00 N ATOM 480 N THR 61 46.079 28.381 -3.945 1.00 0.00 N ATOM 481 CA THR 61 44.678 28.550 -4.079 1.00 0.00 C ATOM 482 C THR 61 44.068 28.226 -2.739 1.00 0.00 C ATOM 483 O THR 61 44.269 27.162 -2.140 1.00 0.00 O ATOM 484 CB THR 61 44.106 27.734 -5.205 1.00 0.00 C ATOM 485 OG1 THR 61 44.617 28.329 -6.374 1.00 0.00 O ATOM 486 CG2 THR 61 42.601 27.875 -5.363 1.00 0.00 C ATOM 487 N LYS 62 43.341 29.214 -2.244 1.00 0.00 N ATOM 488 CA LYS 62 42.574 29.055 -1.047 1.00 0.00 C ATOM 489 C LYS 62 41.231 28.465 -1.443 1.00 0.00 C ATOM 490 O LYS 62 40.514 29.053 -2.257 1.00 0.00 O ATOM 491 CB LYS 62 42.358 30.428 -0.385 1.00 0.00 C ATOM 492 CG LYS 62 43.688 31.071 0.071 1.00 0.00 C ATOM 493 CD LYS 62 43.473 32.419 0.754 1.00 0.00 C ATOM 494 CE LYS 62 44.800 33.088 1.162 1.00 0.00 C ATOM 495 NZ LYS 62 44.561 34.394 1.794 1.00 0.00 N ATOM 496 N ALA 63 40.956 27.279 -0.913 1.00 0.00 N ATOM 497 CA ALA 63 39.733 26.565 -1.168 1.00 0.00 C ATOM 498 C ALA 63 38.902 26.608 0.087 1.00 0.00 C ATOM 499 O ALA 63 39.294 26.069 1.116 1.00 0.00 O ATOM 500 CB ALA 63 40.073 25.124 -1.573 1.00 0.00 C ATOM 501 N THR 64 37.789 27.319 0.016 1.00 0.00 N ATOM 502 CA THR 64 36.945 27.474 1.158 1.00 0.00 C ATOM 503 C THR 64 35.868 26.430 1.187 1.00 0.00 C ATOM 504 O THR 64 35.210 26.155 0.183 1.00 0.00 O ATOM 505 CB THR 64 36.260 28.881 1.135 1.00 0.00 C ATOM 506 OG1 THR 64 35.520 29.121 -0.045 1.00 0.00 O ATOM 507 CG2 THR 64 37.248 30.043 1.232 1.00 0.00 C ATOM 508 N ILE 65 35.708 25.846 2.369 1.00 0.00 N ATOM 509 CA ILE 65 34.766 24.795 2.559 1.00 0.00 C ATOM 510 C ILE 65 33.780 25.305 3.575 1.00 0.00 C ATOM 511 O ILE 65 34.101 25.470 4.750 1.00 0.00 O ATOM 512 CB ILE 65 35.392 23.503 3.153 1.00 0.00 C ATOM 513 CG1 ILE 65 36.464 23.045 2.192 1.00 0.00 C ATOM 514 CG2 ILE 65 34.354 22.373 3.316 1.00 0.00 C ATOM 515 CD1 ILE 65 37.841 23.614 2.463 1.00 0.00 C ATOM 516 N ASN 66 32.555 25.483 3.125 1.00 0.00 N ATOM 517 CA ASN 66 31.550 25.903 4.044 1.00 0.00 C ATOM 518 C ASN 66 30.662 24.752 4.374 1.00 0.00 C ATOM 519 O ASN 66 30.203 24.064 3.461 1.00 0.00 O ATOM 520 CB ASN 66 30.730 27.069 3.441 1.00 0.00 C ATOM 521 CG ASN 66 31.545 28.347 3.223 1.00 0.00 C ATOM 522 OD1 ASN 66 32.248 28.831 4.115 1.00 0.00 O ATOM 523 ND2 ASN 66 31.489 28.925 2.025 1.00 0.00 N ATOM 524 N ILE 67 30.451 24.573 5.676 1.00 0.00 N ATOM 525 CA ILE 67 29.571 23.585 6.213 1.00 0.00 C ATOM 526 C ILE 67 28.373 24.328 6.738 1.00 0.00 C ATOM 527 O ILE 67 28.561 25.244 7.511 1.00 0.00 O ATOM 528 CB ILE 67 30.247 22.804 7.345 1.00 0.00 C ATOM 529 CG1 ILE 67 31.484 22.153 6.766 1.00 0.00 C ATOM 530 CG2 ILE 67 29.279 21.747 7.899 1.00 0.00 C ATOM 531 CD1 ILE 67 32.251 21.392 7.822 1.00 0.00 C ATOM 532 N ASP 68 27.167 23.907 6.344 1.00 0.00 N ATOM 533 CA ASP 68 25.980 24.699 6.615 1.00 0.00 C ATOM 534 C ASP 68 25.295 24.460 7.909 1.00 0.00 C ATOM 535 O ASP 68 24.593 25.333 8.431 1.00 0.00 O ATOM 536 CB ASP 68 24.939 24.510 5.478 1.00 0.00 C ATOM 537 CG ASP 68 25.266 25.276 4.190 1.00 0.00 C ATOM 538 OD1 ASP 68 26.105 26.206 4.233 1.00 0.00 O ATOM 539 OD2 ASP 68 24.645 24.945 3.159 1.00 0.00 O ATOM 540 N ALA 69 25.516 23.286 8.436 1.00 0.00 N ATOM 541 CA ALA 69 24.956 22.924 9.685 1.00 0.00 C ATOM 542 C ALA 69 25.892 22.059 10.455 1.00 0.00 C ATOM 543 O ALA 69 26.878 21.624 9.890 1.00 0.00 O ATOM 544 CB ALA 69 23.530 22.438 9.535 1.00 0.00 C ATOM 545 N ILE 70 25.589 21.832 11.731 1.00 0.00 N ATOM 546 CA ILE 70 24.729 20.728 12.119 1.00 0.00 C ATOM 547 C ILE 70 24.081 21.122 13.426 1.00 0.00 C ATOM 548 O ILE 70 24.559 20.752 14.495 1.00 0.00 O ATOM 549 CB ILE 70 25.679 19.463 12.353 1.00 0.00 C ATOM 550 CG1 ILE 70 26.615 19.060 11.190 1.00 0.00 C ATOM 551 CG2 ILE 70 24.884 18.218 12.728 1.00 0.00 C ATOM 552 CD1 ILE 70 27.614 17.930 11.372 1.00 0.00 C ATOM 553 N SER 71 22.975 21.845 13.354 1.00 0.00 N ATOM 554 CA SER 71 22.096 21.860 14.490 1.00 0.00 C ATOM 555 C SER 71 20.802 21.151 14.155 1.00 0.00 C ATOM 556 O SER 71 19.945 21.662 13.431 1.00 0.00 O ATOM 557 CB SER 71 21.849 23.326 14.926 1.00 0.00 C ATOM 558 OG SER 71 21.137 23.391 16.161 1.00 0.00 O ATOM 559 N GLY 72 20.790 19.889 14.551 1.00 0.00 N ATOM 560 CA GLY 72 20.123 18.882 13.767 1.00 0.00 C ATOM 561 C GLY 72 21.047 18.501 12.607 1.00 0.00 C ATOM 562 O GLY 72 21.894 19.282 12.187 1.00 0.00 O ATOM 563 N PHE 73 20.949 17.282 12.094 1.00 0.00 N ATOM 564 CA PHE 73 22.050 16.734 11.317 1.00 0.00 C ATOM 565 C PHE 73 22.321 17.285 9.941 1.00 0.00 C ATOM 566 O PHE 73 23.379 16.971 9.408 1.00 0.00 O ATOM 567 CB PHE 73 21.753 15.226 11.099 1.00 0.00 C ATOM 568 CG PHE 73 22.061 14.361 12.299 1.00 0.00 C ATOM 569 CD1 PHE 73 21.030 13.723 13.009 1.00 0.00 C ATOM 570 CD2 PHE 73 23.412 14.201 12.700 1.00 0.00 C ATOM 571 CE1 PHE 73 21.345 12.912 14.119 1.00 0.00 C ATOM 572 CE2 PHE 73 23.721 13.401 13.818 1.00 0.00 C ATOM 573 CZ PHE 73 22.678 12.761 14.522 1.00 0.00 C ATOM 574 N ALA 74 21.349 17.990 9.364 1.00 0.00 N ATOM 575 CA ALA 74 21.314 18.305 7.958 1.00 0.00 C ATOM 576 C ALA 74 22.538 19.010 7.431 1.00 0.00 C ATOM 577 O ALA 74 22.651 20.216 7.573 1.00 0.00 O ATOM 578 CB ALA 74 20.082 19.168 7.612 1.00 0.00 C ATOM 579 N TYR 75 23.444 18.252 6.839 1.00 0.00 N ATOM 580 CA TYR 75 24.746 18.733 6.500 1.00 0.00 C ATOM 581 C TYR 75 24.755 18.919 5.027 1.00 0.00 C ATOM 582 O TYR 75 24.341 18.041 4.263 1.00 0.00 O ATOM 583 CB TYR 75 25.774 17.722 6.985 1.00 0.00 C ATOM 584 CG TYR 75 25.742 16.375 6.269 1.00 0.00 C ATOM 585 CD1 TYR 75 26.446 16.101 5.072 1.00 0.00 C ATOM 586 CD2 TYR 75 24.798 15.436 6.714 1.00 0.00 C ATOM 587 CE1 TYR 75 26.312 14.857 4.419 1.00 0.00 C ATOM 588 CE2 TYR 75 24.542 14.276 5.981 1.00 0.00 C ATOM 589 CZ TYR 75 25.378 13.926 4.921 1.00 0.00 C ATOM 590 OH TYR 75 25.413 12.599 4.599 1.00 0.00 H ATOM 591 N GLU 76 25.261 20.068 4.664 1.00 0.00 N ATOM 592 CA GLU 76 25.675 20.282 3.344 1.00 0.00 C ATOM 593 C GLU 76 26.949 21.072 3.387 1.00 0.00 C ATOM 594 O GLU 76 27.183 21.876 4.286 1.00 0.00 O ATOM 595 CB GLU 76 24.556 21.023 2.558 1.00 0.00 C ATOM 596 CG GLU 76 23.190 20.279 2.467 1.00 0.00 C ATOM 597 CD GLU 76 22.196 20.880 1.473 1.00 0.00 C ATOM 598 OE1 GLU 76 22.643 21.678 0.611 1.00 0.00 O ATOM 599 OE2 GLU 76 21.046 20.391 1.440 1.00 0.00 O ATOM 600 N TYR 77 27.772 20.726 2.413 1.00 0.00 N ATOM 601 CA TYR 77 29.118 21.179 2.339 1.00 0.00 C ATOM 602 C TYR 77 29.336 21.693 0.950 1.00 0.00 C ATOM 603 O TYR 77 29.243 20.941 -0.018 1.00 0.00 O ATOM 604 CB TYR 77 30.074 20.035 2.608 1.00 0.00 C ATOM 605 CG TYR 77 30.144 19.453 3.982 1.00 0.00 C ATOM 606 CD1 TYR 77 29.042 18.753 4.473 1.00 0.00 C ATOM 607 CD2 TYR 77 31.337 19.501 4.718 1.00 0.00 C ATOM 608 CE1 TYR 77 29.049 18.329 5.789 1.00 0.00 C ATOM 609 CE2 TYR 77 31.323 19.054 6.048 1.00 0.00 C ATOM 610 CZ TYR 77 30.128 18.609 6.624 1.00 0.00 C ATOM 611 OH TYR 77 29.999 18.407 7.961 1.00 0.00 H ATOM 612 N THR 78 29.692 22.961 0.867 1.00 0.00 N ATOM 613 CA THR 78 29.990 23.528 -0.410 1.00 0.00 C ATOM 614 C THR 78 31.451 23.908 -0.425 1.00 0.00 C ATOM 615 O THR 78 31.939 24.534 0.525 1.00 0.00 O ATOM 616 CB THR 78 29.058 24.747 -0.684 1.00 0.00 C ATOM 617 OG1 THR 78 27.694 24.330 -0.756 1.00 0.00 O ATOM 618 CG2 THR 78 29.300 25.399 -2.059 1.00 0.00 C ATOM 619 N LEU 79 32.125 23.527 -1.505 1.00 0.00 N ATOM 620 CA LEU 79 33.499 23.876 -1.701 1.00 0.00 C ATOM 621 C LEU 79 33.605 24.930 -2.774 1.00 0.00 C ATOM 622 O LEU 79 33.460 24.649 -3.967 1.00 0.00 O ATOM 623 CB LEU 79 34.332 22.630 -2.118 1.00 0.00 C ATOM 624 CG LEU 79 35.844 22.905 -2.362 1.00 0.00 C ATOM 625 CD1 LEU 79 36.547 23.268 -1.080 1.00 0.00 C ATOM 626 CD2 LEU 79 36.622 21.696 -2.838 1.00 0.00 C ATOM 627 N GLU 80 33.944 26.137 -2.356 1.00 0.00 N ATOM 628 CA GLU 80 34.214 27.202 -3.269 1.00 0.00 C ATOM 629 C GLU 80 35.714 27.424 -3.366 1.00 0.00 C ATOM 630 O GLU 80 36.421 27.692 -2.395 1.00 0.00 O ATOM 631 CB GLU 80 33.486 28.475 -2.814 1.00 0.00 C ATOM 632 CG GLU 80 33.582 29.635 -3.830 1.00 0.00 C ATOM 633 CD GLU 80 32.894 30.919 -3.363 1.00 0.00 C ATOM 634 OE1 GLU 80 32.193 30.883 -2.327 1.00 0.00 O ATOM 635 OE2 GLU 80 33.151 31.937 -4.051 1.00 0.00 O ATOM 636 N ILE 81 36.212 27.305 -4.590 1.00 0.00 N ATOM 637 CA ILE 81 37.614 27.477 -4.875 1.00 0.00 C ATOM 638 C ILE 81 37.795 28.732 -5.693 1.00 0.00 C ATOM 639 O ILE 81 37.698 28.719 -6.923 1.00 0.00 O ATOM 640 CB ILE 81 38.206 26.278 -5.616 1.00 0.00 C ATOM 641 CG1 ILE 81 37.978 25.076 -4.735 1.00 0.00 C ATOM 642 CG2 ILE 81 39.716 26.485 -5.885 1.00 0.00 C ATOM 643 CD1 ILE 81 38.497 23.814 -5.346 1.00 0.00 C ATOM 644 N ASN 82 38.131 29.807 -4.985 1.00 0.00 N ATOM 645 CA ASN 82 38.577 31.076 -5.542 1.00 0.00 C ATOM 646 C ASN 82 37.599 31.646 -6.560 1.00 0.00 C ATOM 647 O ASN 82 37.965 32.128 -7.634 1.00 0.00 O ATOM 648 CB ASN 82 40.006 30.946 -6.145 1.00 0.00 C ATOM 649 CG ASN 82 40.705 32.288 -6.388 1.00 0.00 C ATOM 650 OD1 ASN 82 40.541 33.241 -5.640 1.00 0.00 O ATOM 651 ND2 ASN 82 41.488 32.388 -7.461 1.00 0.00 N ATOM 652 N GLY 83 36.322 31.452 -6.248 1.00 0.00 N ATOM 653 CA GLY 83 35.266 31.898 -7.099 1.00 0.00 C ATOM 654 C GLY 83 34.522 30.809 -7.818 1.00 0.00 C ATOM 655 O GLY 83 33.361 30.962 -8.167 1.00 0.00 O ATOM 656 N LYS 84 35.213 29.698 -8.069 1.00 0.00 N ATOM 657 CA LYS 84 34.561 28.568 -8.662 1.00 0.00 C ATOM 658 C LYS 84 33.815 27.806 -7.601 1.00 0.00 C ATOM 659 O LYS 84 34.411 27.397 -6.613 1.00 0.00 O ATOM 660 CB LYS 84 35.575 27.602 -9.301 1.00 0.00 C ATOM 661 CG LYS 84 36.301 28.212 -10.504 1.00 0.00 C ATOM 662 CD LYS 84 37.233 27.201 -11.191 1.00 0.00 C ATOM 663 CE LYS 84 37.985 27.814 -12.382 1.00 0.00 C ATOM 664 NZ LYS 84 38.891 26.830 -13.009 1.00 0.00 N ATOM 665 N SER 85 32.532 27.591 -7.851 1.00 0.00 N ATOM 666 CA SER 85 31.726 26.809 -6.965 1.00 0.00 C ATOM 667 C SER 85 31.686 25.414 -7.513 1.00 0.00 C ATOM 668 O SER 85 31.229 25.163 -8.634 1.00 0.00 O ATOM 669 CB SER 85 30.304 27.420 -6.859 1.00 0.00 C ATOM 670 OG SER 85 29.474 26.681 -5.984 1.00 0.00 O ATOM 671 N LEU 86 32.231 24.516 -6.706 1.00 0.00 N ATOM 672 CA LEU 86 32.158 23.105 -6.920 1.00 0.00 C ATOM 673 C LEU 86 31.299 22.562 -5.818 1.00 0.00 C ATOM 674 O LEU 86 31.308 23.012 -4.670 1.00 0.00 O ATOM 675 CB LEU 86 33.566 22.518 -6.831 1.00 0.00 C ATOM 676 CG LEU 86 34.574 23.182 -7.787 1.00 0.00 C ATOM 677 CD1 LEU 86 35.934 22.582 -7.540 1.00 0.00 C ATOM 678 CD2 LEU 86 34.188 23.009 -9.270 1.00 0.00 C ATOM 679 N LYS 87 30.516 21.584 -6.208 1.00 0.00 N ATOM 680 CA LYS 87 29.564 21.028 -5.314 1.00 0.00 C ATOM 681 C LYS 87 29.324 19.632 -5.721 1.00 0.00 C ATOM 682 O LYS 87 28.496 19.349 -6.594 1.00 0.00 O ATOM 683 CB LYS 87 28.264 21.890 -5.308 1.00 0.00 C ATOM 684 CG LYS 87 27.237 21.491 -4.229 1.00 0.00 C ATOM 685 CD LYS 87 25.954 22.355 -4.288 1.00 0.00 C ATOM 686 CE LYS 87 24.982 22.029 -3.131 1.00 0.00 C ATOM 687 NZ LYS 87 23.716 22.772 -3.098 1.00 0.00 N ATOM 688 N LYS 88 30.086 18.776 -5.082 1.00 0.00 N ATOM 689 CA LYS 88 29.789 17.405 -5.151 1.00 0.00 C ATOM 690 C LYS 88 29.892 16.809 -3.837 1.00 0.00 C ATOM 691 O LYS 88 30.863 16.138 -3.577 1.00 0.00 O ATOM 692 CB LYS 88 30.748 16.697 -6.155 1.00 0.00 C ATOM 693 CG LYS 88 30.722 17.220 -7.585 1.00 0.00 C ATOM 694 CD LYS 88 31.669 16.420 -8.481 1.00 0.00 C ATOM 695 CE LYS 88 31.702 16.970 -9.905 1.00 0.00 C ATOM 696 NZ LYS 88 32.627 16.187 -10.763 1.00 0.00 N ATOM 697 N TYR 89 28.868 17.005 -3.043 1.00 0.00 N ATOM 698 CA TYR 89 28.941 16.339 -1.809 1.00 0.00 C ATOM 699 C TYR 89 27.841 15.343 -1.684 1.00 0.00 C ATOM 700 O TYR 89 26.754 15.505 -2.243 1.00 0.00 O ATOM 701 CB TYR 89 29.017 17.313 -0.614 1.00 0.00 C ATOM 702 CG TYR 89 27.723 18.024 -0.362 1.00 0.00 C ATOM 703 CD1 TYR 89 26.742 17.522 0.530 1.00 0.00 C ATOM 704 CD2 TYR 89 27.461 19.138 -1.153 1.00 0.00 C ATOM 705 CE1 TYR 89 25.456 18.110 0.548 1.00 0.00 C ATOM 706 CE2 TYR 89 26.237 19.764 -1.030 1.00 0.00 C ATOM 707 CZ TYR 89 25.200 19.222 -0.286 1.00 0.00 C ATOM 708 OH TYR 89 23.967 19.737 -0.525 1.00 0.00 H ATOM 709 N MET 90 28.193 14.312 -0.951 1.00 0.00 N ATOM 710 CA MET 90 27.329 13.288 -0.530 1.00 0.00 C ATOM 711 C MET 90 27.635 12.927 0.920 1.00 0.00 C ATOM 712 O MET 90 28.512 13.627 1.480 1.00 0.00 O ATOM 713 CB MET 90 27.346 12.098 -1.523 1.00 0.00 C ATOM 714 CG MET 90 26.802 12.439 -2.924 1.00 0.00 C ATOM 715 SD MET 90 26.938 11.128 -4.166 1.00 0.00 S ATOM 716 CE MET 90 25.730 9.964 -3.490 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 64.56 60.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 54.62 65.3 118 100.0 118 ARMSMC SURFACE . . . . . . . . 76.50 50.9 108 100.0 108 ARMSMC BURIED . . . . . . . . 39.59 74.3 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.15 48.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 83.00 50.0 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 80.55 55.8 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 88.98 43.2 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 79.40 54.8 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.85 58.2 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 53.33 63.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 63.01 59.0 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 57.99 57.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 67.24 59.1 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.01 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 62.01 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 55.48 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 54.63 61.1 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 80.16 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.29 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 78.29 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 89.24 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 81.54 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 57.23 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.57 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.57 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0397 CRMSCA SECONDARY STRUCTURE . . 2.30 59 100.0 59 CRMSCA SURFACE . . . . . . . . 4.10 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.52 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.67 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 2.50 293 100.0 293 CRMSMC SURFACE . . . . . . . . 4.21 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.62 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.86 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 5.95 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.52 252 100.0 252 CRMSSC SURFACE . . . . . . . . 6.82 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.24 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.83 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.65 488 100.0 488 CRMSALL SURFACE . . . . . . . . 5.56 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.52 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.786 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 1.977 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 3.257 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.046 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.871 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.081 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 3.358 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.112 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.646 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 4.713 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.599 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 5.656 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.291 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.704 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 2.827 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 4.395 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 2.701 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 13 35 64 79 89 90 90 DISTCA CA (P) 14.44 38.89 71.11 87.78 98.89 90 DISTCA CA (RMS) 0.71 1.22 1.88 2.33 3.32 DISTCA ALL (N) 92 241 399 546 678 716 716 DISTALL ALL (P) 12.85 33.66 55.73 76.26 94.69 716 DISTALL ALL (RMS) 0.74 1.28 1.85 2.57 3.88 DISTALL END of the results output