####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 715), selected 90 , name T0540TS399_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS399_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.04 4.04 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 14 - 41 1.98 4.19 LCS_AVERAGE: 26.19 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 1.00 4.94 LCS_AVERAGE: 9.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 90 0 3 6 9 14 17 21 28 38 44 52 61 65 73 77 81 83 84 87 88 LCS_GDT T 2 T 2 3 4 90 3 3 4 5 5 18 24 42 47 55 66 73 75 79 84 85 87 88 89 89 LCS_GDT D 3 D 3 3 4 90 3 4 4 5 11 15 35 42 47 58 66 73 75 79 84 85 87 88 89 89 LCS_GDT L 4 L 4 3 22 90 3 4 7 7 30 36 57 67 72 75 80 82 84 85 85 87 87 88 89 89 LCS_GDT V 5 V 5 8 22 90 4 23 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 6 A 6 8 22 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 7 V 7 8 22 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT W 8 W 8 8 22 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT D 9 D 9 8 22 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 10 V 10 8 22 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 11 A 11 8 22 90 5 27 42 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT L 12 L 12 8 22 90 4 12 19 42 57 62 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT S 13 S 13 4 22 90 3 5 13 23 27 34 55 62 70 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT D 14 D 14 10 28 90 10 22 38 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 15 G 15 10 28 90 8 22 38 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 16 V 16 10 28 90 10 22 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT H 17 H 17 10 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 18 K 18 10 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 19 I 19 10 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 20 E 20 10 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT F 21 F 21 10 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 22 E 22 10 28 90 8 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT H 23 H 23 10 28 90 5 27 42 54 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 24 G 24 3 28 90 3 3 13 38 57 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 25 T 25 4 28 90 3 4 6 30 48 62 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 26 T 26 4 28 90 3 4 4 6 14 40 62 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT S 27 S 27 4 28 90 3 12 21 27 49 59 65 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 28 G 28 4 28 90 3 4 20 32 53 61 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 29 K 29 5 28 90 1 4 20 34 58 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT R 30 R 30 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 31 V 31 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 32 V 32 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT Y 33 Y 33 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 34 V 34 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT D 35 D 35 11 28 90 5 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 36 G 36 11 28 90 5 23 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 37 K 37 11 28 90 15 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 38 E 38 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 39 E 39 11 28 90 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 40 I 40 11 28 90 3 4 32 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT R 41 R 41 6 28 90 4 7 13 21 36 59 65 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 42 K 42 6 14 90 4 5 9 16 28 37 56 68 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 43 E 43 6 14 90 4 5 9 15 20 28 42 60 69 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT W 44 W 44 6 14 90 4 5 7 10 20 26 29 41 52 64 74 80 83 85 85 87 87 88 89 89 LCS_GDT M 45 M 45 5 14 90 3 7 17 22 32 52 63 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT F 46 F 46 5 14 90 3 5 11 16 23 31 42 60 70 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 47 K 47 5 9 90 3 7 17 23 42 56 64 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT L 48 L 48 4 9 90 3 3 7 8 17 21 27 64 71 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 49 V 49 8 21 90 3 16 38 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 50 G 50 8 21 90 7 22 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 51 K 51 8 21 90 3 24 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 52 E 52 8 21 90 15 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 53 T 53 8 21 90 6 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT F 54 F 54 8 21 90 8 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT Y 55 Y 55 8 21 90 6 20 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT V 56 V 56 8 21 90 6 20 39 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 57 G 57 7 21 90 3 9 19 37 49 62 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 58 A 58 5 21 90 3 4 12 26 46 58 61 69 72 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 59 A 59 4 21 90 3 4 4 21 38 50 61 65 72 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 60 K 60 10 27 90 3 8 18 38 54 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 61 T 61 10 27 90 8 20 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 62 K 62 10 27 90 5 24 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 63 A 63 10 27 90 13 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 64 T 64 10 27 90 4 25 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 65 I 65 10 27 90 5 25 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT N 66 N 66 10 27 90 4 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 67 I 67 10 27 90 5 23 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT D 68 D 68 10 27 90 4 17 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 69 A 69 10 27 90 4 14 35 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 70 I 70 10 27 90 3 12 24 44 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT S 71 S 71 7 27 90 3 8 15 32 45 56 65 67 70 75 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 72 G 72 7 27 90 3 6 11 18 38 56 60 63 70 75 79 83 84 85 85 87 87 88 89 89 LCS_GDT F 73 F 73 14 27 90 5 22 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT A 74 A 74 14 27 90 4 16 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT Y 75 Y 75 14 27 90 7 18 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 76 E 76 14 27 90 7 18 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT Y 77 Y 77 14 27 90 7 17 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT T 78 T 78 14 27 90 4 14 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT L 79 L 79 14 27 90 7 13 42 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT E 80 E 80 14 27 90 7 13 42 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT I 81 I 81 14 27 90 6 13 42 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT N 82 N 82 14 27 90 6 13 31 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT G 83 G 83 14 27 90 6 13 23 42 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 84 K 84 14 27 90 6 13 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT S 85 S 85 14 27 90 7 22 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT L 86 L 86 14 27 90 3 8 37 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 87 K 87 5 16 90 3 5 15 23 46 53 65 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT K 88 K 88 5 16 90 3 6 22 43 52 60 65 70 75 76 80 83 84 85 85 87 87 88 89 89 LCS_GDT Y 89 Y 89 5 13 90 3 4 6 11 14 30 38 47 55 63 66 71 75 80 84 87 87 88 89 89 LCS_GDT M 90 M 90 3 13 90 0 7 9 14 29 39 48 56 60 67 70 77 79 83 84 87 87 88 89 89 LCS_AVERAGE LCS_A: 45.30 ( 9.70 26.19 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 27 43 55 59 63 67 70 75 76 80 83 84 85 85 87 87 88 89 89 GDT PERCENT_AT 17.78 30.00 47.78 61.11 65.56 70.00 74.44 77.78 83.33 84.44 88.89 92.22 93.33 94.44 94.44 96.67 96.67 97.78 98.89 98.89 GDT RMS_LOCAL 0.30 0.66 1.01 1.28 1.36 1.57 1.77 2.00 2.41 2.47 2.88 3.04 3.09 3.21 3.21 3.44 3.44 3.61 3.78 3.78 GDT RMS_ALL_AT 4.17 4.27 4.30 4.23 4.28 4.26 4.25 4.19 4.12 4.12 4.09 4.15 4.13 4.14 4.14 4.12 4.12 4.08 4.05 4.05 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 14.274 0 0.433 1.344 15.871 0.000 0.000 LGA T 2 T 2 11.241 0 0.635 0.605 12.510 0.000 0.000 LGA D 3 D 3 10.633 0 0.267 1.104 16.347 2.976 1.488 LGA L 4 L 4 5.621 0 0.574 1.324 9.300 32.857 20.536 LGA V 5 V 5 1.744 0 0.670 1.010 5.976 66.905 51.088 LGA A 6 A 6 1.370 0 0.080 0.073 1.582 79.286 79.714 LGA V 7 V 7 1.578 0 0.062 0.100 1.725 72.857 72.857 LGA W 8 W 8 1.432 0 0.036 1.176 10.440 81.429 40.986 LGA D 9 D 9 1.174 0 0.085 0.943 4.625 81.429 64.881 LGA V 10 V 10 1.160 0 0.124 1.154 3.347 79.286 73.333 LGA A 11 A 11 1.616 0 0.141 0.131 2.858 69.048 68.190 LGA L 12 L 12 3.222 0 0.107 1.406 5.282 43.095 47.976 LGA S 13 S 13 6.552 0 0.407 0.580 8.427 19.762 15.159 LGA D 14 D 14 2.004 0 0.108 1.211 5.324 64.881 51.250 LGA G 15 G 15 1.786 0 0.048 0.048 1.954 75.000 75.000 LGA V 16 V 16 1.195 0 0.172 1.198 3.011 81.548 74.626 LGA H 17 H 17 0.332 0 0.196 1.237 5.143 97.619 70.476 LGA K 18 K 18 0.623 0 0.076 0.856 2.929 90.476 84.815 LGA I 19 I 19 0.982 0 0.153 0.195 1.304 85.952 85.952 LGA E 20 E 20 1.377 0 0.116 0.563 3.225 81.429 72.328 LGA F 21 F 21 1.555 0 0.084 0.255 1.960 72.857 74.416 LGA E 22 E 22 1.661 0 0.050 0.700 2.911 72.976 69.365 LGA H 23 H 23 2.567 0 0.581 0.495 5.887 69.048 45.190 LGA G 24 G 24 3.022 0 0.374 0.374 3.481 53.571 53.571 LGA T 25 T 25 3.727 0 0.687 0.629 7.706 36.310 26.259 LGA T 26 T 26 5.475 0 0.087 0.179 8.524 26.071 20.204 LGA S 27 S 27 5.149 0 0.176 0.692 5.804 30.238 28.095 LGA G 28 G 28 3.181 0 0.690 0.690 3.339 61.548 61.548 LGA K 29 K 29 2.683 0 0.508 1.029 8.512 57.619 41.693 LGA R 30 R 30 1.555 0 0.089 1.054 6.728 67.143 51.905 LGA V 31 V 31 1.175 0 0.071 0.206 1.574 81.429 81.497 LGA V 32 V 32 1.137 0 0.071 0.116 1.338 81.429 81.429 LGA Y 33 Y 33 1.434 0 0.075 1.273 7.825 83.690 55.278 LGA V 34 V 34 0.622 0 0.058 0.076 1.030 92.857 90.544 LGA D 35 D 35 0.584 0 0.072 0.122 1.064 92.857 89.405 LGA G 36 G 36 0.813 0 0.132 0.132 1.103 88.214 88.214 LGA K 37 K 37 0.705 0 0.041 0.234 1.736 88.333 83.598 LGA E 38 E 38 1.675 0 0.090 0.648 4.570 75.000 56.402 LGA E 39 E 39 1.490 0 0.613 0.668 3.432 71.429 67.778 LGA I 40 I 40 1.754 0 0.102 0.168 8.181 60.714 41.548 LGA R 41 R 41 4.776 0 0.119 1.363 10.504 40.833 17.403 LGA K 42 K 42 6.744 0 0.607 0.677 7.871 11.905 10.899 LGA E 43 E 43 8.082 0 0.357 1.091 9.739 4.524 6.667 LGA W 44 W 44 10.465 0 0.045 1.163 18.789 1.071 0.306 LGA M 45 M 45 6.760 0 0.165 0.895 9.061 6.667 16.607 LGA F 46 F 46 9.225 0 0.635 1.246 16.726 5.833 2.121 LGA K 47 K 47 6.013 0 0.575 1.034 10.539 12.619 9.471 LGA L 48 L 48 7.567 0 0.110 1.347 13.110 17.024 8.690 LGA V 49 V 49 1.672 0 0.200 0.249 3.759 74.286 67.211 LGA G 50 G 50 1.519 0 0.277 0.277 1.519 83.810 83.810 LGA K 51 K 51 0.853 0 0.218 0.822 4.986 90.476 68.836 LGA E 52 E 52 0.772 0 0.116 0.888 4.069 90.476 73.122 LGA T 53 T 53 1.019 0 0.119 0.150 1.147 83.690 84.014 LGA F 54 F 54 1.543 0 0.118 0.229 1.559 77.143 87.403 LGA Y 55 Y 55 1.903 0 0.033 0.229 2.018 72.857 72.183 LGA V 56 V 56 1.954 0 0.062 0.059 2.733 65.000 70.884 LGA G 57 G 57 4.154 0 0.083 0.083 4.396 40.357 40.357 LGA A 58 A 58 5.476 0 0.666 0.617 6.237 31.548 28.667 LGA A 59 A 59 5.537 0 0.399 0.371 7.714 36.429 30.571 LGA K 60 K 60 3.154 0 0.412 0.827 8.994 53.810 34.444 LGA T 61 T 61 1.255 0 0.140 1.123 2.352 79.405 76.667 LGA K 62 K 62 0.733 0 0.053 0.744 3.859 90.595 76.878 LGA A 63 A 63 0.488 0 0.039 0.060 0.587 97.619 96.190 LGA T 64 T 64 1.117 0 0.069 0.981 2.894 83.690 78.027 LGA I 65 I 65 0.933 0 0.029 0.664 1.268 90.476 87.083 LGA N 66 N 66 0.956 0 0.155 0.956 4.087 90.476 74.345 LGA I 67 I 67 0.858 0 0.044 0.674 3.141 85.952 80.893 LGA D 68 D 68 1.190 0 0.078 0.399 1.964 85.952 83.750 LGA A 69 A 69 2.125 0 0.075 0.086 3.834 59.524 57.619 LGA I 70 I 70 3.483 0 0.227 1.059 5.876 57.738 44.167 LGA S 71 S 71 5.772 0 0.103 0.115 6.497 19.286 20.794 LGA G 72 G 72 6.630 0 0.283 0.283 6.630 26.190 26.190 LGA F 73 F 73 1.181 0 0.379 1.139 9.868 75.119 39.567 LGA A 74 A 74 1.302 0 0.080 0.099 1.773 81.429 79.714 LGA Y 75 Y 75 1.152 0 0.071 0.182 1.852 81.429 78.571 LGA E 76 E 76 1.190 0 0.053 0.753 3.165 83.690 71.693 LGA Y 77 Y 77 1.334 0 0.081 0.098 1.669 79.286 77.857 LGA T 78 T 78 1.681 0 0.037 0.041 2.389 77.143 71.837 LGA L 79 L 79 1.751 0 0.069 1.411 4.890 72.857 58.036 LGA E 80 E 80 1.775 0 0.052 0.223 2.480 72.857 71.058 LGA I 81 I 81 1.761 0 0.030 0.643 2.141 75.000 72.917 LGA N 82 N 82 2.249 0 0.071 0.071 2.574 62.857 66.845 LGA G 83 G 83 2.827 0 0.114 0.114 2.827 60.952 60.952 LGA K 84 K 84 1.684 0 0.056 0.682 2.508 75.119 72.169 LGA S 85 S 85 0.975 0 0.056 0.093 2.332 85.952 78.889 LGA L 86 L 86 1.909 0 0.062 1.038 6.941 75.238 53.988 LGA K 87 K 87 4.784 0 0.048 0.724 11.015 35.833 18.254 LGA K 88 K 88 3.864 0 0.037 1.081 8.059 25.595 36.349 LGA Y 89 Y 89 8.955 0 0.167 1.355 16.454 11.190 3.730 LGA M 90 M 90 8.199 1 0.046 1.123 10.216 1.667 3.333 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 359 99.72 716 715 99.86 90 SUMMARY(RMSD_GDC): 4.042 3.924 5.131 60.774 54.340 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 70 2.00 66.389 59.865 3.336 LGA_LOCAL RMSD: 1.998 Number of atoms: 70 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.190 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.042 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.565882 * X + -0.447901 * Y + 0.692216 * Z + 26.792290 Y_new = 0.761578 * X + 0.037695 * Y + 0.646976 * Z + 6.468218 Z_new = -0.315874 * X + 0.893288 * Y + 0.319780 * Z + -2.909160 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.209827 0.321378 1.227029 [DEG: 126.6138 18.4136 70.3036 ] ZXZ: 2.322426 1.245299 -0.339886 [DEG: 133.0652 71.3503 -19.4740 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS399_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS399_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 70 2.00 59.865 4.04 REMARK ---------------------------------------------------------- MOLECULE T0540TS399_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 26.792 6.468 -2.909 1.00 0.00 N ATOM 2 CA MET 1 27.796 7.406 -2.445 1.00 0.00 C ATOM 3 C MET 1 27.551 7.822 -1.004 1.00 0.00 C ATOM 4 O MET 1 26.654 7.437 -0.325 1.00 0.00 O ATOM 5 CB MET 1 27.786 8.671 -3.307 1.00 0.00 C ATOM 6 CG MET 1 28.139 8.432 -4.765 1.00 0.00 C ATOM 7 SD MET 1 29.825 7.833 -4.983 1.00 0.00 S ATOM 8 CE MET 1 29.818 7.429 -6.729 1.00 0.00 C ATOM 9 N THR 2 28.414 8.691 -0.454 1.00 0.00 N ATOM 10 CA THR 2 28.177 9.043 0.910 1.00 0.00 C ATOM 11 C THR 2 27.970 10.513 1.024 1.00 0.00 C ATOM 12 O THR 2 28.715 11.364 0.572 1.00 0.00 O ATOM 13 CB THR 2 29.366 8.652 1.808 1.00 0.00 C ATOM 14 OG1 THR 2 30.546 9.339 1.369 1.00 0.00 O ATOM 15 CG2 THR 2 29.615 7.153 1.739 1.00 0.00 C ATOM 16 N ASP 3 26.858 10.880 1.685 1.00 0.00 N ATOM 17 CA ASP 3 26.538 12.241 1.979 1.00 0.00 C ATOM 18 C ASP 3 27.530 12.675 3.003 1.00 0.00 C ATOM 19 O ASP 3 27.871 13.817 3.199 1.00 0.00 O ATOM 20 CB ASP 3 25.112 12.351 2.521 1.00 0.00 C ATOM 21 CG ASP 3 24.063 12.133 1.448 1.00 0.00 C ATOM 22 OD1 ASP 3 24.425 12.144 0.252 1.00 0.00 O ATOM 23 OD2 ASP 3 22.878 11.954 1.801 1.00 0.00 O ATOM 24 N LEU 4 28.064 11.691 3.746 1.00 0.00 N ATOM 25 CA LEU 4 28.966 11.919 4.833 1.00 0.00 C ATOM 26 C LEU 4 30.168 12.646 4.317 1.00 0.00 C ATOM 27 O LEU 4 30.669 13.527 4.869 1.00 0.00 O ATOM 28 CB LEU 4 29.405 10.591 5.453 1.00 0.00 C ATOM 29 CG LEU 4 28.334 9.815 6.222 1.00 0.00 C ATOM 30 CD1 LEU 4 28.850 8.442 6.626 1.00 0.00 C ATOM 31 CD2 LEU 4 27.931 10.562 7.485 1.00 0.00 C ATOM 32 N VAL 5 30.711 12.264 3.145 1.00 0.00 N ATOM 33 CA VAL 5 31.883 12.971 2.717 1.00 0.00 C ATOM 34 C VAL 5 31.583 13.674 1.434 1.00 0.00 C ATOM 35 O VAL 5 30.773 13.309 0.628 1.00 0.00 O ATOM 36 CB VAL 5 33.068 12.014 2.491 1.00 0.00 C ATOM 37 CG1 VAL 5 34.274 12.775 1.963 1.00 0.00 C ATOM 38 CG2 VAL 5 33.461 11.334 3.795 1.00 0.00 C ATOM 39 N ALA 6 32.287 14.797 1.189 1.00 0.00 N ATOM 40 CA ALA 6 32.101 15.550 -0.014 1.00 0.00 C ATOM 41 C ALA 6 33.394 15.484 -0.760 1.00 0.00 C ATOM 42 O ALA 6 34.416 15.415 -0.253 1.00 0.00 O ATOM 43 CB ALA 6 31.747 16.993 0.313 1.00 0.00 C ATOM 44 N VAL 7 33.378 15.508 -2.097 1.00 0.00 N ATOM 45 CA VAL 7 34.570 15.453 -2.927 1.00 0.00 C ATOM 46 C VAL 7 34.387 16.415 -4.088 1.00 0.00 C ATOM 47 O VAL 7 33.352 16.732 -4.567 1.00 0.00 O ATOM 48 CB VAL 7 34.808 14.036 -3.480 1.00 0.00 C ATOM 49 CG1 VAL 7 36.003 14.024 -4.421 1.00 0.00 C ATOM 50 CG2 VAL 7 35.080 13.059 -2.346 1.00 0.00 C ATOM 51 N TRP 8 35.479 16.949 -4.617 1.00 0.00 N ATOM 52 CA TRP 8 35.495 17.825 -5.763 1.00 0.00 C ATOM 53 C TRP 8 36.778 17.509 -6.547 1.00 0.00 C ATOM 54 O TRP 8 37.864 17.413 -6.089 1.00 0.00 O ATOM 55 CB TRP 8 35.491 19.289 -5.319 1.00 0.00 C ATOM 56 CG TRP 8 35.548 20.261 -6.457 1.00 0.00 C ATOM 57 CD1 TRP 8 34.507 20.665 -7.243 1.00 0.00 C ATOM 58 CD2 TRP 8 36.707 20.954 -6.937 1.00 0.00 C ATOM 59 NE1 TRP 8 34.945 21.565 -8.184 1.00 0.00 N ATOM 60 CE2 TRP 8 36.293 21.760 -8.017 1.00 0.00 C ATOM 61 CE3 TRP 8 38.053 20.972 -6.561 1.00 0.00 C ATOM 62 CZ2 TRP 8 37.177 22.574 -8.724 1.00 0.00 C ATOM 63 CZ3 TRP 8 38.926 21.780 -7.264 1.00 0.00 C ATOM 64 CH2 TRP 8 38.488 22.571 -8.332 1.00 0.00 H ATOM 65 N ASP 9 36.678 17.325 -7.862 1.00 0.00 N ATOM 66 CA ASP 9 37.832 17.078 -8.720 1.00 0.00 C ATOM 67 C ASP 9 38.041 18.322 -9.618 1.00 0.00 C ATOM 68 O ASP 9 37.254 18.775 -10.417 1.00 0.00 O ATOM 69 CB ASP 9 37.595 15.846 -9.596 1.00 0.00 C ATOM 70 CG ASP 9 38.793 15.507 -10.461 1.00 0.00 C ATOM 71 OD1 ASP 9 39.791 16.256 -10.413 1.00 0.00 O ATOM 72 OD2 ASP 9 38.734 14.493 -11.185 1.00 0.00 O ATOM 73 N VAL 10 39.207 18.958 -9.498 1.00 0.00 N ATOM 74 CA VAL 10 39.547 20.202 -10.191 1.00 0.00 C ATOM 75 C VAL 10 41.030 20.172 -10.543 1.00 0.00 C ATOM 76 O VAL 10 41.877 19.719 -9.869 1.00 0.00 O ATOM 77 CB VAL 10 39.268 21.434 -9.309 1.00 0.00 C ATOM 78 CG1 VAL 10 40.116 21.388 -8.047 1.00 0.00 C ATOM 79 CG2 VAL 10 39.597 22.713 -10.064 1.00 0.00 C ATOM 80 N ALA 11 41.415 20.696 -11.708 1.00 0.00 N ATOM 81 CA ALA 11 42.760 20.767 -12.197 1.00 0.00 C ATOM 82 C ALA 11 43.580 21.724 -11.324 1.00 0.00 C ATOM 83 O ALA 11 43.519 22.906 -11.343 1.00 0.00 O ATOM 84 CB ALA 11 42.777 21.272 -13.632 1.00 0.00 C ATOM 85 N LEU 12 44.440 21.195 -10.462 1.00 0.00 N ATOM 86 CA LEU 12 45.230 21.964 -9.524 1.00 0.00 C ATOM 87 C LEU 12 46.531 21.193 -9.316 1.00 0.00 C ATOM 88 O LEU 12 46.656 19.985 -9.274 1.00 0.00 O ATOM 89 CB LEU 12 44.484 22.120 -8.197 1.00 0.00 C ATOM 90 CG LEU 12 45.229 22.860 -7.084 1.00 0.00 C ATOM 91 CD1 LEU 12 45.406 24.328 -7.439 1.00 0.00 C ATOM 92 CD2 LEU 12 44.459 22.777 -5.775 1.00 0.00 C ATOM 93 N SER 13 47.626 21.933 -9.170 1.00 0.00 N ATOM 94 CA SER 13 48.987 21.376 -9.087 1.00 0.00 C ATOM 95 C SER 13 49.328 20.528 -10.351 1.00 0.00 C ATOM 96 O SER 13 49.805 19.383 -10.389 1.00 0.00 O ATOM 97 CB SER 13 49.123 20.473 -7.860 1.00 0.00 C ATOM 98 OG SER 13 48.896 21.199 -6.664 1.00 0.00 O ATOM 99 N ASP 14 49.069 21.118 -11.517 1.00 0.00 N ATOM 100 CA ASP 14 49.383 20.558 -12.824 1.00 0.00 C ATOM 101 C ASP 14 48.730 19.199 -13.124 1.00 0.00 C ATOM 102 O ASP 14 49.215 18.357 -13.756 1.00 0.00 O ATOM 103 CB ASP 14 50.891 20.340 -12.965 1.00 0.00 C ATOM 104 CG ASP 14 51.671 21.641 -12.940 1.00 0.00 C ATOM 105 OD1 ASP 14 51.319 22.560 -13.710 1.00 0.00 O ATOM 106 OD2 ASP 14 52.635 21.741 -12.152 1.00 0.00 O ATOM 107 N GLY 15 47.510 18.928 -12.640 1.00 0.00 N ATOM 108 CA GLY 15 46.883 17.658 -12.890 1.00 0.00 C ATOM 109 C GLY 15 45.534 17.571 -12.165 1.00 0.00 C ATOM 110 O GLY 15 45.003 18.444 -11.668 1.00 0.00 O ATOM 111 N VAL 16 44.890 16.420 -12.079 1.00 0.00 N ATOM 112 CA VAL 16 43.608 16.286 -11.405 1.00 0.00 C ATOM 113 C VAL 16 43.881 16.280 -9.886 1.00 0.00 C ATOM 114 O VAL 16 44.500 15.442 -9.262 1.00 0.00 O ATOM 115 CB VAL 16 42.894 14.981 -11.804 1.00 0.00 C ATOM 116 CG1 VAL 16 41.591 14.829 -11.035 1.00 0.00 C ATOM 117 CG2 VAL 16 42.577 14.982 -13.292 1.00 0.00 C ATOM 118 N HIS 17 43.385 17.300 -9.193 1.00 0.00 N ATOM 119 CA HIS 17 43.519 17.504 -7.761 1.00 0.00 C ATOM 120 C HIS 17 42.212 17.051 -7.095 1.00 0.00 C ATOM 121 O HIS 17 41.098 17.573 -7.226 1.00 0.00 O ATOM 122 CB HIS 17 43.771 18.981 -7.452 1.00 0.00 C ATOM 123 CG HIS 17 44.011 19.262 -6.001 1.00 0.00 C ATOM 124 ND1 HIS 17 45.209 18.986 -5.377 1.00 0.00 N ATOM 125 CD2 HIS 17 43.229 19.822 -4.909 1.00 0.00 C ATOM 126 CE1 HIS 17 45.122 19.346 -4.084 1.00 0.00 C ATOM 127 NE2 HIS 17 43.937 19.848 -3.796 1.00 0.00 N ATOM 128 N LYS 18 42.323 15.977 -6.299 1.00 0.00 N ATOM 129 CA LYS 18 41.194 15.339 -5.635 1.00 0.00 C ATOM 130 C LYS 18 40.997 15.932 -4.251 1.00 0.00 C ATOM 131 O LYS 18 41.774 15.870 -3.388 1.00 0.00 O ATOM 132 CB LYS 18 41.437 13.835 -5.492 1.00 0.00 C ATOM 133 CG LYS 18 40.258 13.067 -4.917 1.00 0.00 C ATOM 134 CD LYS 18 40.564 11.582 -4.812 1.00 0.00 C ATOM 135 CE LYS 18 39.373 10.811 -4.264 1.00 0.00 C ATOM 136 NZ LYS 18 39.666 9.357 -4.138 1.00 0.00 N ATOM 137 N ILE 19 39.856 16.579 -3.977 1.00 0.00 N ATOM 138 CA ILE 19 39.671 17.294 -2.712 1.00 0.00 C ATOM 139 C ILE 19 38.449 16.746 -1.910 1.00 0.00 C ATOM 140 O ILE 19 37.294 16.835 -2.229 1.00 0.00 O ATOM 141 CB ILE 19 39.428 18.796 -2.943 1.00 0.00 C ATOM 142 CG1 ILE 19 40.615 19.422 -3.677 1.00 0.00 C ATOM 143 CG2 ILE 19 39.249 19.517 -1.615 1.00 0.00 C ATOM 144 CD1 ILE 19 40.383 20.856 -4.101 1.00 0.00 C ATOM 145 N GLU 20 38.694 16.111 -0.749 1.00 0.00 N ATOM 146 CA GLU 20 37.684 15.442 0.064 1.00 0.00 C ATOM 147 C GLU 20 37.488 16.039 1.472 1.00 0.00 C ATOM 148 O GLU 20 38.371 16.319 2.263 1.00 0.00 O ATOM 149 CB GLU 20 38.052 13.971 0.273 1.00 0.00 C ATOM 150 CG GLU 20 38.022 13.137 -0.998 1.00 0.00 C ATOM 151 CD GLU 20 38.318 11.673 -0.741 1.00 0.00 C ATOM 152 OE1 GLU 20 38.521 11.305 0.436 1.00 0.00 O ATOM 153 OE2 GLU 20 38.347 10.893 -1.715 1.00 0.00 O ATOM 154 N PHE 21 36.218 16.269 1.855 1.00 0.00 N ATOM 155 CA PHE 21 35.927 16.834 3.137 1.00 0.00 C ATOM 156 C PHE 21 35.344 15.727 3.952 1.00 0.00 C ATOM 157 O PHE 21 34.262 15.268 3.789 1.00 0.00 O ATOM 158 CB PHE 21 34.931 17.988 2.999 1.00 0.00 C ATOM 159 CG PHE 21 34.633 18.689 4.294 1.00 0.00 C ATOM 160 CD1 PHE 21 35.522 19.611 4.818 1.00 0.00 C ATOM 161 CD2 PHE 21 33.465 18.427 4.987 1.00 0.00 C ATOM 162 CE1 PHE 21 35.248 20.257 6.008 1.00 0.00 C ATOM 163 CE2 PHE 21 33.191 19.072 6.179 1.00 0.00 C ATOM 164 CZ PHE 21 34.077 19.984 6.690 1.00 0.00 C ATOM 165 N GLU 22 36.112 15.227 4.935 1.00 0.00 N ATOM 166 CA GLU 22 35.619 14.136 5.718 1.00 0.00 C ATOM 167 C GLU 22 34.674 14.700 6.722 1.00 0.00 C ATOM 168 O GLU 22 34.765 15.789 7.200 1.00 0.00 O ATOM 169 CB GLU 22 36.771 13.422 6.427 1.00 0.00 C ATOM 170 CG GLU 22 37.758 12.750 5.485 1.00 0.00 C ATOM 171 CD GLU 22 38.860 12.017 6.223 1.00 0.00 C ATOM 172 OE1 GLU 22 38.882 12.077 7.471 1.00 0.00 O ATOM 173 OE2 GLU 22 39.703 11.381 5.555 1.00 0.00 O ATOM 174 N HIS 23 33.658 13.907 7.098 1.00 0.00 N ATOM 175 CA HIS 23 32.699 14.397 8.035 1.00 0.00 C ATOM 176 C HIS 23 33.458 14.718 9.272 1.00 0.00 C ATOM 177 O HIS 23 33.308 15.709 9.913 1.00 0.00 O ATOM 178 CB HIS 23 31.633 13.335 8.316 1.00 0.00 C ATOM 179 CG HIS 23 30.585 13.775 9.291 1.00 0.00 C ATOM 180 ND1 HIS 23 29.616 14.702 8.975 1.00 0.00 N ATOM 181 CD2 HIS 23 30.254 13.456 10.672 1.00 0.00 C ATOM 182 CE1 HIS 23 28.824 14.890 10.046 1.00 0.00 C ATOM 183 NE2 HIS 23 29.200 14.146 11.067 1.00 0.00 N ATOM 184 N GLY 24 34.369 13.812 9.674 1.00 0.00 N ATOM 185 CA GLY 24 35.155 14.067 10.839 1.00 0.00 C ATOM 186 C GLY 24 34.189 14.253 11.951 1.00 0.00 C ATOM 187 O GLY 24 33.319 13.494 12.213 1.00 0.00 O ATOM 188 N THR 25 34.330 15.362 12.698 1.00 0.00 N ATOM 189 CA THR 25 33.379 15.562 13.741 1.00 0.00 C ATOM 190 C THR 25 32.722 16.884 13.545 1.00 0.00 C ATOM 191 O THR 25 33.203 17.828 12.936 1.00 0.00 O ATOM 192 CB THR 25 34.049 15.541 15.128 1.00 0.00 C ATOM 193 OG1 THR 25 34.989 16.618 15.223 1.00 0.00 O ATOM 194 CG2 THR 25 34.782 14.226 15.346 1.00 0.00 C ATOM 195 N THR 26 31.500 16.997 14.103 1.00 0.00 N ATOM 196 CA THR 26 30.679 18.166 14.009 1.00 0.00 C ATOM 197 C THR 26 31.383 19.282 14.704 1.00 0.00 C ATOM 198 O THR 26 31.424 20.401 14.310 1.00 0.00 O ATOM 199 CB THR 26 29.305 17.945 14.670 1.00 0.00 C ATOM 200 OG1 THR 26 28.612 16.888 13.995 1.00 0.00 O ATOM 201 CG2 THR 26 28.468 19.212 14.591 1.00 0.00 C ATOM 202 N SER 27 32.009 18.977 15.853 1.00 0.00 N ATOM 203 CA SER 27 32.660 20.004 16.608 1.00 0.00 C ATOM 204 C SER 27 33.687 20.631 15.726 1.00 0.00 C ATOM 205 O SER 27 33.875 21.795 15.644 1.00 0.00 O ATOM 206 CB SER 27 33.330 19.412 17.849 1.00 0.00 C ATOM 207 OG SER 27 32.367 18.900 18.755 1.00 0.00 O ATOM 208 N GLY 28 34.443 19.806 14.979 1.00 0.00 N ATOM 209 CA GLY 28 35.454 20.373 14.141 1.00 0.00 C ATOM 210 C GLY 28 36.353 19.261 13.731 1.00 0.00 C ATOM 211 O GLY 28 36.021 18.121 13.641 1.00 0.00 O ATOM 212 N LYS 29 37.623 19.593 13.448 1.00 0.00 N ATOM 213 CA LYS 29 38.558 18.587 13.057 1.00 0.00 C ATOM 214 C LYS 29 38.015 17.927 11.835 1.00 0.00 C ATOM 215 O LYS 29 38.283 16.816 11.487 1.00 0.00 O ATOM 216 CB LYS 29 38.736 17.557 14.175 1.00 0.00 C ATOM 217 CG LYS 29 39.330 18.126 15.453 1.00 0.00 C ATOM 218 CD LYS 29 39.489 17.049 16.515 1.00 0.00 C ATOM 219 CE LYS 29 39.967 17.638 17.831 1.00 0.00 C ATOM 220 NZ LYS 29 40.078 16.603 18.895 1.00 0.00 N ATOM 221 N ARG 30 37.163 18.657 11.090 1.00 0.00 N ATOM 222 CA ARG 30 36.668 18.164 9.844 1.00 0.00 C ATOM 223 C ARG 30 37.858 18.216 8.952 1.00 0.00 C ATOM 224 O ARG 30 38.418 19.216 8.622 1.00 0.00 O ATOM 225 CB ARG 30 35.530 19.049 9.331 1.00 0.00 C ATOM 226 CG ARG 30 34.279 19.014 10.193 1.00 0.00 C ATOM 227 CD ARG 30 33.202 19.932 9.642 1.00 0.00 C ATOM 228 NE ARG 30 31.967 19.859 10.420 1.00 0.00 N ATOM 229 CZ ARG 30 31.676 20.665 11.436 1.00 0.00 C ATOM 230 NH1 ARG 30 30.530 20.525 12.087 1.00 0.00 H ATOM 231 NH2 ARG 30 32.533 21.611 11.799 1.00 0.00 H ATOM 232 N VAL 31 38.312 17.040 8.498 1.00 0.00 N ATOM 233 CA VAL 31 39.540 17.016 7.770 1.00 0.00 C ATOM 234 C VAL 31 39.298 17.321 6.338 1.00 0.00 C ATOM 235 O VAL 31 38.323 16.970 5.704 1.00 0.00 O ATOM 236 CB VAL 31 40.218 15.636 7.853 1.00 0.00 C ATOM 237 CG1 VAL 31 41.458 15.598 6.974 1.00 0.00 C ATOM 238 CG2 VAL 31 40.634 15.332 9.285 1.00 0.00 C ATOM 239 N VAL 32 40.260 18.044 5.742 1.00 0.00 N ATOM 240 CA VAL 32 40.233 18.289 4.338 1.00 0.00 C ATOM 241 C VAL 32 41.301 17.403 3.799 1.00 0.00 C ATOM 242 O VAL 32 42.383 17.287 4.276 1.00 0.00 O ATOM 243 CB VAL 32 40.519 19.768 4.018 1.00 0.00 C ATOM 244 CG1 VAL 32 40.548 19.990 2.513 1.00 0.00 C ATOM 245 CG2 VAL 32 39.441 20.660 4.614 1.00 0.00 C ATOM 246 N TYR 33 41.000 16.695 2.697 1.00 0.00 N ATOM 247 CA TYR 33 41.928 15.731 2.194 1.00 0.00 C ATOM 248 C TYR 33 42.351 16.181 0.834 1.00 0.00 C ATOM 249 O TYR 33 41.606 16.405 -0.058 1.00 0.00 O ATOM 250 CB TYR 33 41.273 14.351 2.107 1.00 0.00 C ATOM 251 CG TYR 33 42.188 13.271 1.573 1.00 0.00 C ATOM 252 CD1 TYR 33 43.169 12.708 2.379 1.00 0.00 C ATOM 253 CD2 TYR 33 42.067 12.820 0.265 1.00 0.00 C ATOM 254 CE1 TYR 33 44.009 11.721 1.899 1.00 0.00 C ATOM 255 CE2 TYR 33 42.898 11.833 -0.232 1.00 0.00 C ATOM 256 CZ TYR 33 43.875 11.285 0.599 1.00 0.00 C ATOM 257 OH TYR 33 44.710 10.302 0.119 1.00 0.00 H ATOM 258 N VAL 34 43.672 16.338 0.625 1.00 0.00 N ATOM 259 CA VAL 34 44.126 16.817 -0.646 1.00 0.00 C ATOM 260 C VAL 34 45.337 16.035 -1.014 1.00 0.00 C ATOM 261 O VAL 34 46.225 15.768 -0.261 1.00 0.00 O ATOM 262 CB VAL 34 44.480 18.315 -0.590 1.00 0.00 C ATOM 263 CG1 VAL 34 44.997 18.791 -1.939 1.00 0.00 C ATOM 264 CG2 VAL 34 43.255 19.139 -0.226 1.00 0.00 C ATOM 265 N ASP 35 45.409 15.612 -2.292 1.00 0.00 N ATOM 266 CA ASP 35 46.496 14.901 -2.909 1.00 0.00 C ATOM 267 C ASP 35 47.095 13.888 -1.986 1.00 0.00 C ATOM 268 O ASP 35 48.256 13.793 -1.752 1.00 0.00 O ATOM 269 CB ASP 35 47.606 15.870 -3.320 1.00 0.00 C ATOM 270 CG ASP 35 47.181 16.804 -4.434 1.00 0.00 C ATOM 271 OD1 ASP 35 46.158 16.519 -5.092 1.00 0.00 O ATOM 272 OD2 ASP 35 47.870 17.824 -4.651 1.00 0.00 O ATOM 273 N GLY 36 46.248 13.032 -1.387 1.00 0.00 N ATOM 274 CA GLY 36 46.740 11.941 -0.594 1.00 0.00 C ATOM 275 C GLY 36 47.344 12.429 0.683 1.00 0.00 C ATOM 276 O GLY 36 48.111 11.821 1.316 1.00 0.00 O ATOM 277 N LYS 37 46.982 13.643 1.134 1.00 0.00 N ATOM 278 CA LYS 37 47.534 14.097 2.375 1.00 0.00 C ATOM 279 C LYS 37 46.422 14.690 3.163 1.00 0.00 C ATOM 280 O LYS 37 45.643 15.444 2.726 1.00 0.00 O ATOM 281 CB LYS 37 48.620 15.146 2.128 1.00 0.00 C ATOM 282 CG LYS 37 49.352 15.590 3.383 1.00 0.00 C ATOM 283 CD LYS 37 50.473 16.563 3.054 1.00 0.00 C ATOM 284 CE LYS 37 51.142 17.081 4.316 1.00 0.00 C ATOM 285 NZ LYS 37 52.274 17.998 4.007 1.00 0.00 N ATOM 286 N GLU 38 46.309 14.336 4.454 1.00 0.00 N ATOM 287 CA GLU 38 45.296 15.033 5.172 1.00 0.00 C ATOM 288 C GLU 38 45.847 16.401 5.416 1.00 0.00 C ATOM 289 O GLU 38 46.947 16.632 5.843 1.00 0.00 O ATOM 290 CB GLU 38 44.991 14.323 6.492 1.00 0.00 C ATOM 291 CG GLU 38 44.357 12.951 6.327 1.00 0.00 C ATOM 292 CD GLU 38 43.998 12.312 7.654 1.00 0.00 C ATOM 293 OE1 GLU 38 44.303 12.913 8.705 1.00 0.00 O ATOM 294 OE2 GLU 38 43.413 11.208 7.643 1.00 0.00 O ATOM 295 N GLU 39 45.026 17.426 5.127 1.00 0.00 N ATOM 296 CA GLU 39 45.451 18.793 5.207 1.00 0.00 C ATOM 297 C GLU 39 45.385 19.272 6.620 1.00 0.00 C ATOM 298 O GLU 39 44.851 18.674 7.530 1.00 0.00 O ATOM 299 CB GLU 39 44.553 19.685 4.347 1.00 0.00 C ATOM 300 CG GLU 39 44.665 19.423 2.854 1.00 0.00 C ATOM 301 CD GLU 39 46.010 19.836 2.290 1.00 0.00 C ATOM 302 OE1 GLU 39 46.766 20.530 3.002 1.00 0.00 O ATOM 303 OE2 GLU 39 46.310 19.465 1.135 1.00 0.00 O ATOM 304 N ILE 40 45.974 20.463 6.858 1.00 0.00 N ATOM 305 CA ILE 40 46.042 21.055 8.162 1.00 0.00 C ATOM 306 C ILE 40 45.051 22.186 8.166 1.00 0.00 C ATOM 307 O ILE 40 45.099 23.126 7.438 1.00 0.00 O ATOM 308 CB ILE 40 47.454 21.589 8.467 1.00 0.00 C ATOM 309 CG1 ILE 40 48.475 20.450 8.426 1.00 0.00 C ATOM 310 CG2 ILE 40 47.497 22.225 9.849 1.00 0.00 C ATOM 311 CD1 ILE 40 49.912 20.916 8.504 1.00 0.00 C ATOM 312 N ARG 41 44.042 22.120 9.063 1.00 0.00 N ATOM 313 CA ARG 41 42.931 23.039 9.108 1.00 0.00 C ATOM 314 C ARG 41 43.039 23.975 10.282 1.00 0.00 C ATOM 315 O ARG 41 43.800 23.837 11.237 1.00 0.00 O ATOM 316 CB ARG 41 41.610 22.277 9.234 1.00 0.00 C ATOM 317 CG ARG 41 40.385 23.092 8.854 1.00 0.00 C ATOM 318 CD ARG 41 39.103 22.391 9.273 1.00 0.00 C ATOM 319 NE ARG 41 38.962 22.333 10.725 1.00 0.00 N ATOM 320 CZ ARG 41 38.038 21.617 11.358 1.00 0.00 C ATOM 321 NH1 ARG 41 37.985 21.626 12.684 1.00 0.00 H ATOM 322 NH2 ARG 41 37.169 20.894 10.664 1.00 0.00 H ATOM 323 N LYS 42 42.208 25.042 10.237 1.00 0.00 N ATOM 324 CA LYS 42 42.021 26.079 11.224 1.00 0.00 C ATOM 325 C LYS 42 41.319 25.586 12.452 1.00 0.00 C ATOM 326 O LYS 42 41.651 25.841 13.565 1.00 0.00 O ATOM 327 CB LYS 42 41.183 27.222 10.648 1.00 0.00 C ATOM 328 CG LYS 42 41.901 28.046 9.591 1.00 0.00 C ATOM 329 CD LYS 42 41.014 29.164 9.066 1.00 0.00 C ATOM 330 CE LYS 42 41.719 29.967 7.986 1.00 0.00 C ATOM 331 NZ LYS 42 40.854 31.051 7.445 1.00 0.00 N ATOM 332 N GLU 43 40.236 24.799 12.266 1.00 0.00 N ATOM 333 CA GLU 43 39.404 24.326 13.340 1.00 0.00 C ATOM 334 C GLU 43 38.806 25.503 14.053 1.00 0.00 C ATOM 335 O GLU 43 38.748 25.625 15.234 1.00 0.00 O ATOM 336 CB GLU 43 40.227 23.504 14.334 1.00 0.00 C ATOM 337 CG GLU 43 40.844 22.249 13.739 1.00 0.00 C ATOM 338 CD GLU 43 41.626 21.445 14.759 1.00 0.00 C ATOM 339 OE1 GLU 43 41.737 21.901 15.916 1.00 0.00 O ATOM 340 OE2 GLU 43 42.129 20.359 14.401 1.00 0.00 O ATOM 341 N TRP 44 38.304 26.483 13.288 1.00 0.00 N ATOM 342 CA TRP 44 37.727 27.633 13.914 1.00 0.00 C ATOM 343 C TRP 44 36.271 27.336 14.058 1.00 0.00 C ATOM 344 O TRP 44 35.563 27.001 13.169 1.00 0.00 O ATOM 345 CB TRP 44 37.942 28.878 13.050 1.00 0.00 C ATOM 346 CG TRP 44 39.372 29.317 12.978 1.00 0.00 C ATOM 347 CD1 TRP 44 40.453 28.684 13.520 1.00 0.00 C ATOM 348 CD2 TRP 44 39.878 30.488 12.324 1.00 0.00 C ATOM 349 NE1 TRP 44 41.602 29.386 13.246 1.00 0.00 N ATOM 350 CE2 TRP 44 41.275 30.499 12.512 1.00 0.00 C ATOM 351 CE3 TRP 44 39.288 31.527 11.600 1.00 0.00 C ATOM 352 CZ2 TRP 44 42.090 31.509 12.002 1.00 0.00 C ATOM 353 CZ3 TRP 44 40.100 32.526 11.095 1.00 0.00 C ATOM 354 CH2 TRP 44 41.484 32.513 11.297 1.00 0.00 H ATOM 355 N MET 45 35.742 27.462 15.287 1.00 0.00 N ATOM 356 CA MET 45 34.361 27.141 15.438 1.00 0.00 C ATOM 357 C MET 45 33.632 28.370 15.862 1.00 0.00 C ATOM 358 O MET 45 33.805 28.960 16.908 1.00 0.00 O ATOM 359 CB MET 45 34.176 26.051 16.496 1.00 0.00 C ATOM 360 CG MET 45 32.725 25.679 16.758 1.00 0.00 C ATOM 361 SD MET 45 32.556 24.319 17.929 1.00 0.00 S ATOM 362 CE MET 45 33.071 25.116 19.449 1.00 0.00 C ATOM 363 N PHE 46 32.723 28.825 14.986 1.00 0.00 N ATOM 364 CA PHE 46 31.861 29.930 15.250 1.00 0.00 C ATOM 365 C PHE 46 30.672 29.257 15.841 1.00 0.00 C ATOM 366 O PHE 46 30.493 28.123 15.794 1.00 0.00 O ATOM 367 CB PHE 46 31.534 30.677 13.956 1.00 0.00 C ATOM 368 CG PHE 46 32.704 31.414 13.369 1.00 0.00 C ATOM 369 CD1 PHE 46 33.473 30.840 12.371 1.00 0.00 C ATOM 370 CD2 PHE 46 33.037 32.681 13.816 1.00 0.00 C ATOM 371 CE1 PHE 46 34.549 31.518 11.832 1.00 0.00 C ATOM 372 CE2 PHE 46 34.114 33.359 13.277 1.00 0.00 C ATOM 373 CZ PHE 46 34.869 32.783 12.288 1.00 0.00 C ATOM 374 N LYS 47 29.750 29.998 16.467 1.00 0.00 N ATOM 375 CA LYS 47 28.636 29.293 17.019 1.00 0.00 C ATOM 376 C LYS 47 27.913 28.639 15.883 1.00 0.00 C ATOM 377 O LYS 47 27.430 27.541 15.926 1.00 0.00 O ATOM 378 CB LYS 47 27.699 30.258 17.749 1.00 0.00 C ATOM 379 CG LYS 47 28.270 30.816 19.043 1.00 0.00 C ATOM 380 CD LYS 47 27.288 31.762 19.716 1.00 0.00 C ATOM 381 CE LYS 47 27.869 32.339 20.997 1.00 0.00 C ATOM 382 NZ LYS 47 26.932 33.295 21.650 1.00 0.00 N ATOM 383 N LEU 48 27.809 29.357 14.742 1.00 0.00 N ATOM 384 CA LEU 48 27.055 28.921 13.596 1.00 0.00 C ATOM 385 C LEU 48 27.612 27.715 12.888 1.00 0.00 C ATOM 386 O LEU 48 27.047 26.711 12.785 1.00 0.00 O ATOM 387 CB LEU 48 26.985 30.031 12.545 1.00 0.00 C ATOM 388 CG LEU 48 26.235 29.697 11.254 1.00 0.00 C ATOM 389 CD1 LEU 48 24.774 29.389 11.545 1.00 0.00 C ATOM 390 CD2 LEU 48 26.290 30.866 10.283 1.00 0.00 C ATOM 391 N VAL 49 28.837 27.791 12.336 1.00 0.00 N ATOM 392 CA VAL 49 29.264 26.717 11.474 1.00 0.00 C ATOM 393 C VAL 49 30.744 26.594 11.678 1.00 0.00 C ATOM 394 O VAL 49 31.341 26.828 12.714 1.00 0.00 O ATOM 395 CB VAL 49 28.949 27.020 9.998 1.00 0.00 C ATOM 396 CG1 VAL 49 27.447 27.124 9.783 1.00 0.00 C ATOM 397 CG2 VAL 49 29.588 28.334 9.576 1.00 0.00 C ATOM 398 N GLY 50 31.432 26.190 10.602 1.00 0.00 N ATOM 399 CA GLY 50 32.851 26.097 10.627 1.00 0.00 C ATOM 400 C GLY 50 33.281 26.557 9.277 1.00 0.00 C ATOM 401 O GLY 50 32.777 26.216 8.264 1.00 0.00 O ATOM 402 N LYS 51 34.310 27.415 9.223 1.00 0.00 N ATOM 403 CA LYS 51 34.766 27.817 7.930 1.00 0.00 C ATOM 404 C LYS 51 36.178 27.362 7.893 1.00 0.00 C ATOM 405 O LYS 51 37.043 27.890 8.464 1.00 0.00 O ATOM 406 CB LYS 51 34.655 29.335 7.771 1.00 0.00 C ATOM 407 CG LYS 51 33.230 29.862 7.830 1.00 0.00 C ATOM 408 CD LYS 51 33.191 31.369 7.626 1.00 0.00 C ATOM 409 CE LYS 51 31.763 31.891 7.648 1.00 0.00 C ATOM 410 NZ LYS 51 31.699 33.343 7.324 1.00 0.00 N ATOM 411 N GLU 52 36.472 26.277 7.156 1.00 0.00 N ATOM 412 CA GLU 52 37.827 25.824 7.201 1.00 0.00 C ATOM 413 C GLU 52 38.525 26.311 5.983 1.00 0.00 C ATOM 414 O GLU 52 38.235 26.003 4.857 1.00 0.00 O ATOM 415 CB GLU 52 37.880 24.295 7.242 1.00 0.00 C ATOM 416 CG GLU 52 37.316 23.689 8.517 1.00 0.00 C ATOM 417 CD GLU 52 37.326 22.173 8.496 1.00 0.00 C ATOM 418 OE1 GLU 52 38.408 21.590 8.270 1.00 0.00 O ATOM 419 OE2 GLU 52 36.254 21.569 8.705 1.00 0.00 O ATOM 420 N THR 53 39.549 27.156 6.194 1.00 0.00 N ATOM 421 CA THR 53 40.269 27.683 5.082 1.00 0.00 C ATOM 422 C THR 53 41.604 27.027 5.082 1.00 0.00 C ATOM 423 O THR 53 42.477 27.219 5.899 1.00 0.00 O ATOM 424 CB THR 53 40.439 29.210 5.192 1.00 0.00 C ATOM 425 OG1 THR 53 39.150 29.836 5.218 1.00 0.00 O ATOM 426 CG2 THR 53 41.223 29.745 4.003 1.00 0.00 C ATOM 427 N PHE 54 41.814 26.160 4.079 1.00 0.00 N ATOM 428 CA PHE 54 43.042 25.453 3.947 1.00 0.00 C ATOM 429 C PHE 54 43.624 25.793 2.623 1.00 0.00 C ATOM 430 O PHE 54 42.984 26.065 1.636 1.00 0.00 O ATOM 431 CB PHE 54 42.805 23.944 4.036 1.00 0.00 C ATOM 432 CG PHE 54 41.958 23.398 2.923 1.00 0.00 C ATOM 433 CD1 PHE 54 42.538 22.949 1.749 1.00 0.00 C ATOM 434 CD2 PHE 54 40.581 23.331 3.050 1.00 0.00 C ATOM 435 CE1 PHE 54 41.758 22.446 0.724 1.00 0.00 C ATOM 436 CE2 PHE 54 39.802 22.827 2.025 1.00 0.00 C ATOM 437 CZ PHE 54 40.385 22.386 0.867 1.00 0.00 C ATOM 438 N TYR 55 44.967 25.786 2.561 1.00 0.00 N ATOM 439 CA TYR 55 45.658 26.220 1.386 1.00 0.00 C ATOM 440 C TYR 55 46.130 25.001 0.668 1.00 0.00 C ATOM 441 O TYR 55 46.655 24.076 1.193 1.00 0.00 O ATOM 442 CB TYR 55 46.852 27.101 1.761 1.00 0.00 C ATOM 443 CG TYR 55 46.465 28.440 2.348 1.00 0.00 C ATOM 444 CD1 TYR 55 46.333 28.603 3.721 1.00 0.00 C ATOM 445 CD2 TYR 55 46.233 29.536 1.527 1.00 0.00 C ATOM 446 CE1 TYR 55 45.980 29.823 4.266 1.00 0.00 C ATOM 447 CE2 TYR 55 45.878 30.763 2.054 1.00 0.00 C ATOM 448 CZ TYR 55 45.754 30.899 3.436 1.00 0.00 C ATOM 449 OH TYR 55 45.402 32.114 3.976 1.00 0.00 H ATOM 450 N VAL 56 45.940 24.966 -0.668 1.00 0.00 N ATOM 451 CA VAL 56 46.365 23.813 -1.404 1.00 0.00 C ATOM 452 C VAL 56 47.731 24.086 -1.936 1.00 0.00 C ATOM 453 O VAL 56 47.977 24.923 -2.735 1.00 0.00 O ATOM 454 CB VAL 56 45.414 23.510 -2.577 1.00 0.00 C ATOM 455 CG1 VAL 56 45.914 22.315 -3.374 1.00 0.00 C ATOM 456 CG2 VAL 56 44.017 23.194 -2.062 1.00 0.00 C ATOM 457 N GLY 57 48.738 23.322 -1.468 1.00 0.00 N ATOM 458 CA GLY 57 50.080 23.482 -1.948 1.00 0.00 C ATOM 459 C GLY 57 50.462 24.889 -1.664 1.00 0.00 C ATOM 460 O GLY 57 50.012 25.533 -0.778 1.00 0.00 O ATOM 461 N ALA 58 51.381 25.449 -2.475 1.00 0.00 N ATOM 462 CA ALA 58 51.617 26.851 -2.329 1.00 0.00 C ATOM 463 C ALA 58 50.277 27.398 -2.668 1.00 0.00 C ATOM 464 O ALA 58 49.572 26.896 -3.401 1.00 0.00 O ATOM 465 CB ALA 58 52.710 27.307 -3.284 1.00 0.00 C ATOM 466 N ALA 59 49.858 28.539 -2.096 1.00 0.00 N ATOM 467 CA ALA 59 48.504 28.878 -2.404 1.00 0.00 C ATOM 468 C ALA 59 48.452 29.511 -3.752 1.00 0.00 C ATOM 469 O ALA 59 48.410 30.688 -3.946 1.00 0.00 O ATOM 470 CB ALA 59 47.953 29.852 -1.374 1.00 0.00 C ATOM 471 N LYS 60 48.455 28.677 -4.806 1.00 0.00 N ATOM 472 CA LYS 60 48.266 29.179 -6.122 1.00 0.00 C ATOM 473 C LYS 60 46.822 29.517 -6.170 1.00 0.00 C ATOM 474 O LYS 60 46.354 30.500 -6.715 1.00 0.00 O ATOM 475 CB LYS 60 48.633 28.115 -7.159 1.00 0.00 C ATOM 476 CG LYS 60 50.123 27.821 -7.245 1.00 0.00 C ATOM 477 CD LYS 60 50.417 26.762 -8.294 1.00 0.00 C ATOM 478 CE LYS 60 51.902 26.443 -8.357 1.00 0.00 C ATOM 479 NZ LYS 60 52.202 25.390 -9.366 1.00 0.00 N ATOM 480 N THR 61 46.010 28.637 -5.549 1.00 0.00 N ATOM 481 CA THR 61 44.592 28.809 -5.518 1.00 0.00 C ATOM 482 C THR 61 44.156 28.767 -4.092 1.00 0.00 C ATOM 483 O THR 61 44.816 28.331 -3.181 1.00 0.00 O ATOM 484 CB THR 61 43.871 27.698 -6.303 1.00 0.00 C ATOM 485 OG1 THR 61 44.137 26.429 -5.693 1.00 0.00 O ATOM 486 CG2 THR 61 44.356 27.662 -7.744 1.00 0.00 C ATOM 487 N LYS 62 42.928 29.260 -3.840 1.00 0.00 N ATOM 488 CA LYS 62 42.373 29.303 -2.522 1.00 0.00 C ATOM 489 C LYS 62 41.289 28.269 -2.483 1.00 0.00 C ATOM 490 O LYS 62 40.427 28.168 -3.294 1.00 0.00 O ATOM 491 CB LYS 62 41.801 30.691 -2.226 1.00 0.00 C ATOM 492 CG LYS 62 42.846 31.792 -2.157 1.00 0.00 C ATOM 493 CD LYS 62 42.210 33.137 -1.849 1.00 0.00 C ATOM 494 CE LYS 62 43.249 34.247 -1.827 1.00 0.00 C ATOM 495 NZ LYS 62 42.638 35.575 -1.547 1.00 0.00 N ATOM 496 N ALA 63 41.308 27.401 -1.453 1.00 0.00 N ATOM 497 CA ALA 63 40.330 26.356 -1.338 1.00 0.00 C ATOM 498 C ALA 63 39.754 26.434 0.040 1.00 0.00 C ATOM 499 O ALA 63 40.350 26.812 0.986 1.00 0.00 O ATOM 500 CB ALA 63 40.977 24.997 -1.557 1.00 0.00 C ATOM 501 N THR 64 38.471 26.045 0.198 1.00 0.00 N ATOM 502 CA THR 64 37.880 26.081 1.506 1.00 0.00 C ATOM 503 C THR 64 36.804 25.044 1.580 1.00 0.00 C ATOM 504 O THR 64 36.177 24.660 0.647 1.00 0.00 O ATOM 505 CB THR 64 37.261 27.459 1.808 1.00 0.00 C ATOM 506 OG1 THR 64 36.794 27.490 3.162 1.00 0.00 O ATOM 507 CG2 THR 64 36.089 27.732 0.876 1.00 0.00 C ATOM 508 N ILE 65 36.541 24.520 2.793 1.00 0.00 N ATOM 509 CA ILE 65 35.452 23.597 2.928 1.00 0.00 C ATOM 510 C ILE 65 34.408 24.277 3.746 1.00 0.00 C ATOM 511 O ILE 65 34.579 24.708 4.852 1.00 0.00 O ATOM 512 CB ILE 65 35.896 22.297 3.624 1.00 0.00 C ATOM 513 CG1 ILE 65 37.064 21.660 2.868 1.00 0.00 C ATOM 514 CG2 ILE 65 34.750 21.300 3.671 1.00 0.00 C ATOM 515 CD1 ILE 65 36.737 21.295 1.436 1.00 0.00 C ATOM 516 N ASN 66 33.197 24.402 3.172 1.00 0.00 N ATOM 517 CA ASN 66 32.148 25.107 3.839 1.00 0.00 C ATOM 518 C ASN 66 31.349 24.120 4.620 1.00 0.00 C ATOM 519 O ASN 66 30.610 23.341 4.139 1.00 0.00 O ATOM 520 CB ASN 66 31.246 25.811 2.823 1.00 0.00 C ATOM 521 CG ASN 66 30.115 26.578 3.481 1.00 0.00 C ATOM 522 OD1 ASN 66 30.162 26.868 4.676 1.00 0.00 O ATOM 523 ND2 ASN 66 29.092 26.908 2.700 1.00 0.00 N ATOM 524 N ILE 67 31.488 24.128 5.958 1.00 0.00 N ATOM 525 CA ILE 67 30.631 23.267 6.710 1.00 0.00 C ATOM 526 C ILE 67 29.685 24.137 7.459 1.00 0.00 C ATOM 527 O ILE 67 30.008 24.929 8.294 1.00 0.00 O ATOM 528 CB ILE 67 31.431 22.399 7.698 1.00 0.00 C ATOM 529 CG1 ILE 67 32.500 21.594 6.957 1.00 0.00 C ATOM 530 CG2 ILE 67 30.510 21.427 8.420 1.00 0.00 C ATOM 531 CD1 ILE 67 31.942 20.657 5.909 1.00 0.00 C ATOM 532 N ASP 68 28.381 24.000 7.153 1.00 0.00 N ATOM 533 CA ASP 68 27.389 24.831 7.769 1.00 0.00 C ATOM 534 C ASP 68 26.380 23.915 8.391 1.00 0.00 C ATOM 535 O ASP 68 25.830 23.038 7.820 1.00 0.00 O ATOM 536 CB ASP 68 26.719 25.728 6.726 1.00 0.00 C ATOM 537 CG ASP 68 27.642 26.817 6.215 1.00 0.00 C ATOM 538 OD1 ASP 68 28.724 27.006 6.810 1.00 0.00 O ATOM 539 OD2 ASP 68 27.283 27.481 5.220 1.00 0.00 O ATOM 540 N ALA 69 26.089 24.111 9.689 1.00 0.00 N ATOM 541 CA ALA 69 25.134 23.240 10.299 1.00 0.00 C ATOM 542 C ALA 69 23.839 23.975 10.370 1.00 0.00 C ATOM 543 O ALA 69 23.700 25.061 10.848 1.00 0.00 O ATOM 544 CB ALA 69 25.590 22.851 11.698 1.00 0.00 C ATOM 545 N ILE 70 22.767 23.347 9.854 1.00 0.00 N ATOM 546 CA ILE 70 21.474 23.952 9.940 1.00 0.00 C ATOM 547 C ILE 70 20.656 23.035 10.779 1.00 0.00 C ATOM 548 O ILE 70 20.377 21.923 10.481 1.00 0.00 O ATOM 549 CB ILE 70 20.835 24.120 8.549 1.00 0.00 C ATOM 550 CG1 ILE 70 21.709 25.012 7.664 1.00 0.00 C ATOM 551 CG2 ILE 70 19.460 24.757 8.668 1.00 0.00 C ATOM 552 CD1 ILE 70 21.259 25.069 6.221 1.00 0.00 C ATOM 553 N SER 71 20.211 23.520 11.952 1.00 0.00 N ATOM 554 CA SER 71 19.420 22.700 12.818 1.00 0.00 C ATOM 555 C SER 71 20.256 21.551 13.287 1.00 0.00 C ATOM 556 O SER 71 21.293 21.204 12.788 1.00 0.00 O ATOM 557 CB SER 71 18.194 22.166 12.077 1.00 0.00 C ATOM 558 OG SER 71 17.355 23.225 11.646 1.00 0.00 O ATOM 559 N GLY 72 19.785 20.876 14.349 1.00 0.00 N ATOM 560 CA GLY 72 20.493 19.751 14.877 1.00 0.00 C ATOM 561 C GLY 72 20.474 18.650 13.866 1.00 0.00 C ATOM 562 O GLY 72 21.385 17.907 13.654 1.00 0.00 O ATOM 563 N PHE 73 19.339 18.505 13.156 1.00 0.00 N ATOM 564 CA PHE 73 19.134 17.394 12.273 1.00 0.00 C ATOM 565 C PHE 73 20.139 17.319 11.170 1.00 0.00 C ATOM 566 O PHE 73 20.734 16.372 10.921 1.00 0.00 O ATOM 567 CB PHE 73 17.756 17.481 11.614 1.00 0.00 C ATOM 568 CG PHE 73 17.479 16.371 10.640 1.00 0.00 C ATOM 569 CD1 PHE 73 17.095 15.119 11.087 1.00 0.00 C ATOM 570 CD2 PHE 73 17.602 16.580 9.278 1.00 0.00 C ATOM 571 CE1 PHE 73 16.840 14.098 10.190 1.00 0.00 C ATOM 572 CE2 PHE 73 17.348 15.560 8.382 1.00 0.00 C ATOM 573 CZ PHE 73 16.968 14.323 8.833 1.00 0.00 C ATOM 574 N ALA 74 20.372 18.409 10.415 1.00 0.00 N ATOM 575 CA ALA 74 21.215 18.183 9.278 1.00 0.00 C ATOM 576 C ALA 74 22.339 19.162 9.226 1.00 0.00 C ATOM 577 O ALA 74 22.322 20.279 9.715 1.00 0.00 O ATOM 578 CB ALA 74 20.417 18.318 7.991 1.00 0.00 C ATOM 579 N TYR 75 23.436 18.731 8.576 1.00 0.00 N ATOM 580 CA TYR 75 24.586 19.556 8.369 1.00 0.00 C ATOM 581 C TYR 75 24.839 19.506 6.897 1.00 0.00 C ATOM 582 O TYR 75 24.769 18.531 6.251 1.00 0.00 O ATOM 583 CB TYR 75 25.783 19.015 9.154 1.00 0.00 C ATOM 584 CG TYR 75 25.587 19.027 10.654 1.00 0.00 C ATOM 585 CD1 TYR 75 25.027 17.936 11.307 1.00 0.00 C ATOM 586 CD2 TYR 75 25.964 20.127 11.411 1.00 0.00 C ATOM 587 CE1 TYR 75 24.844 17.938 12.676 1.00 0.00 C ATOM 588 CE2 TYR 75 25.789 20.147 12.782 1.00 0.00 C ATOM 589 CZ TYR 75 25.224 19.040 13.412 1.00 0.00 C ATOM 590 OH TYR 75 25.044 19.043 14.776 1.00 0.00 H ATOM 591 N GLU 76 25.166 20.656 6.279 1.00 0.00 N ATOM 592 CA GLU 76 25.431 20.629 4.871 1.00 0.00 C ATOM 593 C GLU 76 26.882 20.926 4.693 1.00 0.00 C ATOM 594 O GLU 76 27.520 21.709 5.301 1.00 0.00 O ATOM 595 CB GLU 76 24.585 21.677 4.146 1.00 0.00 C ATOM 596 CG GLU 76 23.090 21.408 4.190 1.00 0.00 C ATOM 597 CD GLU 76 22.291 22.424 3.399 1.00 0.00 C ATOM 598 OE1 GLU 76 22.901 23.374 2.865 1.00 0.00 O ATOM 599 OE2 GLU 76 21.054 22.271 3.314 1.00 0.00 O ATOM 600 N TYR 77 27.492 20.249 3.778 1.00 0.00 N ATOM 601 CA TYR 77 28.883 20.423 3.579 1.00 0.00 C ATOM 602 C TYR 77 29.118 20.683 2.088 1.00 0.00 C ATOM 603 O TYR 77 28.957 19.889 1.223 1.00 0.00 O ATOM 604 CB TYR 77 29.646 19.170 4.012 1.00 0.00 C ATOM 605 CG TYR 77 29.474 18.821 5.473 1.00 0.00 C ATOM 606 CD1 TYR 77 28.490 17.929 5.880 1.00 0.00 C ATOM 607 CD2 TYR 77 30.296 19.385 6.440 1.00 0.00 C ATOM 608 CE1 TYR 77 28.325 17.604 7.214 1.00 0.00 C ATOM 609 CE2 TYR 77 30.146 19.072 7.778 1.00 0.00 C ATOM 610 CZ TYR 77 29.150 18.174 8.160 1.00 0.00 C ATOM 611 OH TYR 77 28.989 17.852 9.487 1.00 0.00 H ATOM 612 N THR 78 29.541 21.905 1.719 1.00 0.00 N ATOM 613 CA THR 78 29.783 22.133 0.327 1.00 0.00 C ATOM 614 C THR 78 31.178 22.644 0.167 1.00 0.00 C ATOM 615 O THR 78 31.606 23.636 0.685 1.00 0.00 O ATOM 616 CB THR 78 28.801 23.167 -0.255 1.00 0.00 C ATOM 617 OG1 THR 78 27.456 22.704 -0.079 1.00 0.00 O ATOM 618 CG2 THR 78 29.061 23.371 -1.739 1.00 0.00 C ATOM 619 N LEU 79 31.992 21.920 -0.625 1.00 0.00 N ATOM 620 CA LEU 79 33.349 22.314 -0.865 1.00 0.00 C ATOM 621 C LEU 79 33.330 23.446 -1.838 1.00 0.00 C ATOM 622 O LEU 79 32.563 23.540 -2.739 1.00 0.00 O ATOM 623 CB LEU 79 34.151 21.146 -1.443 1.00 0.00 C ATOM 624 CG LEU 79 34.297 19.916 -0.546 1.00 0.00 C ATOM 625 CD1 LEU 79 35.031 18.802 -1.279 1.00 0.00 C ATOM 626 CD2 LEU 79 35.083 20.255 0.711 1.00 0.00 C ATOM 627 N GLU 80 34.251 24.416 -1.668 1.00 0.00 N ATOM 628 CA GLU 80 34.292 25.518 -2.583 1.00 0.00 C ATOM 629 C GLU 80 35.726 25.818 -2.887 1.00 0.00 C ATOM 630 O GLU 80 36.587 25.914 -2.065 1.00 0.00 O ATOM 631 CB GLU 80 33.627 26.751 -1.968 1.00 0.00 C ATOM 632 CG GLU 80 33.623 27.971 -2.876 1.00 0.00 C ATOM 633 CD GLU 80 32.828 29.125 -2.297 1.00 0.00 C ATOM 634 OE1 GLU 80 32.215 28.945 -1.222 1.00 0.00 O ATOM 635 OE2 GLU 80 32.817 30.209 -2.916 1.00 0.00 O ATOM 636 N ILE 81 36.044 25.990 -4.186 1.00 0.00 N ATOM 637 CA ILE 81 37.387 26.302 -4.584 1.00 0.00 C ATOM 638 C ILE 81 37.320 27.556 -5.396 1.00 0.00 C ATOM 639 O ILE 81 36.580 27.731 -6.310 1.00 0.00 O ATOM 640 CB ILE 81 38.004 25.169 -5.426 1.00 0.00 C ATOM 641 CG1 ILE 81 37.989 23.855 -4.643 1.00 0.00 C ATOM 642 CG2 ILE 81 39.444 25.499 -5.787 1.00 0.00 C ATOM 643 CD1 ILE 81 38.812 23.890 -3.375 1.00 0.00 C ATOM 644 N ASN 82 38.165 28.545 -5.057 1.00 0.00 N ATOM 645 CA ASN 82 38.209 29.775 -5.793 1.00 0.00 C ATOM 646 C ASN 82 36.859 30.420 -5.813 1.00 0.00 C ATOM 647 O ASN 82 36.425 31.030 -6.725 1.00 0.00 O ATOM 648 CB ASN 82 38.647 29.520 -7.236 1.00 0.00 C ATOM 649 CG ASN 82 40.089 29.063 -7.337 1.00 0.00 C ATOM 650 OD1 ASN 82 40.913 29.389 -6.483 1.00 0.00 O ATOM 651 ND2 ASN 82 40.398 28.306 -8.383 1.00 0.00 N ATOM 652 N GLY 83 36.097 30.292 -4.713 1.00 0.00 N ATOM 653 CA GLY 83 34.845 30.989 -4.621 1.00 0.00 C ATOM 654 C GLY 83 33.795 30.309 -5.439 1.00 0.00 C ATOM 655 O GLY 83 32.781 30.796 -5.718 1.00 0.00 O ATOM 656 N LYS 84 34.031 29.060 -5.883 1.00 0.00 N ATOM 657 CA LYS 84 32.992 28.425 -6.639 1.00 0.00 C ATOM 658 C LYS 84 32.629 27.150 -5.951 1.00 0.00 C ATOM 659 O LYS 84 33.405 26.440 -5.390 1.00 0.00 O ATOM 660 CB LYS 84 33.470 28.124 -8.061 1.00 0.00 C ATOM 661 CG LYS 84 33.745 29.363 -8.898 1.00 0.00 C ATOM 662 CD LYS 84 34.176 28.991 -10.308 1.00 0.00 C ATOM 663 CE LYS 84 34.450 30.230 -11.146 1.00 0.00 C ATOM 664 NZ LYS 84 34.865 29.881 -12.533 1.00 0.00 N ATOM 665 N SER 85 31.329 26.797 -5.978 1.00 0.00 N ATOM 666 CA SER 85 30.883 25.617 -5.297 1.00 0.00 C ATOM 667 C SER 85 31.305 24.418 -6.079 1.00 0.00 C ATOM 668 O SER 85 31.472 24.399 -7.271 1.00 0.00 O ATOM 669 CB SER 85 29.359 25.620 -5.162 1.00 0.00 C ATOM 670 OG SER 85 28.734 25.502 -6.427 1.00 0.00 O ATOM 671 N LEU 86 31.506 23.291 -5.367 1.00 0.00 N ATOM 672 CA LEU 86 31.878 22.069 -6.013 1.00 0.00 C ATOM 673 C LEU 86 30.788 21.090 -5.734 1.00 0.00 C ATOM 674 O LEU 86 30.247 20.961 -4.682 1.00 0.00 O ATOM 675 CB LEU 86 33.209 21.555 -5.461 1.00 0.00 C ATOM 676 CG LEU 86 34.472 22.228 -6.003 1.00 0.00 C ATOM 677 CD1 LEU 86 34.544 23.679 -5.548 1.00 0.00 C ATOM 678 CD2 LEU 86 35.718 21.512 -5.506 1.00 0.00 C ATOM 679 N LYS 87 30.404 20.306 -6.758 1.00 0.00 N ATOM 680 CA LYS 87 29.328 19.384 -6.573 1.00 0.00 C ATOM 681 C LYS 87 29.814 18.183 -5.833 1.00 0.00 C ATOM 682 O LYS 87 30.892 17.651 -6.000 1.00 0.00 O ATOM 683 CB LYS 87 28.767 18.937 -7.925 1.00 0.00 C ATOM 684 CG LYS 87 28.058 20.037 -8.697 1.00 0.00 C ATOM 685 CD LYS 87 27.490 19.515 -10.006 1.00 0.00 C ATOM 686 CE LYS 87 26.830 20.627 -10.805 1.00 0.00 C ATOM 687 NZ LYS 87 26.271 20.130 -12.093 1.00 0.00 N ATOM 688 N LYS 88 28.961 17.685 -4.919 1.00 0.00 N ATOM 689 CA LYS 88 29.275 16.541 -4.124 1.00 0.00 C ATOM 690 C LYS 88 29.039 15.343 -4.963 1.00 0.00 C ATOM 691 O LYS 88 28.283 15.302 -5.878 1.00 0.00 O ATOM 692 CB LYS 88 28.386 16.494 -2.879 1.00 0.00 C ATOM 693 CG LYS 88 28.663 17.601 -1.876 1.00 0.00 C ATOM 694 CD LYS 88 27.874 17.395 -0.594 1.00 0.00 C ATOM 695 CE LYS 88 26.403 17.728 -0.790 1.00 0.00 C ATOM 696 NZ LYS 88 25.643 17.659 0.489 1.00 0.00 N ATOM 697 N TYR 89 29.741 14.241 -4.648 1.00 0.00 N ATOM 698 CA TYR 89 29.521 13.073 -5.430 1.00 0.00 C ATOM 699 C TYR 89 28.234 12.490 -4.966 1.00 0.00 C ATOM 700 O TYR 89 27.986 12.229 -3.855 1.00 0.00 O ATOM 701 CB TYR 89 30.662 12.073 -5.233 1.00 0.00 C ATOM 702 CG TYR 89 31.957 12.484 -5.896 1.00 0.00 C ATOM 703 CD1 TYR 89 32.954 13.129 -5.174 1.00 0.00 C ATOM 704 CD2 TYR 89 32.180 12.226 -7.242 1.00 0.00 C ATOM 705 CE1 TYR 89 34.141 13.507 -5.772 1.00 0.00 C ATOM 706 CE2 TYR 89 33.361 12.598 -7.857 1.00 0.00 C ATOM 707 CZ TYR 89 34.344 13.243 -7.109 1.00 0.00 C ATOM 708 OH TYR 89 35.524 13.619 -7.706 1.00 0.00 H ATOM 709 N MET 90 27.302 12.252 -5.884 1.00 0.00 N ATOM 710 CA MET 90 26.026 11.684 -5.493 1.00 0.00 C ATOM 711 C MET 90 25.108 11.491 -6.689 1.00 0.00 C ATOM 712 CB MET 90 25.313 12.603 -4.498 1.00 0.00 C ATOM 713 CG MET 90 23.989 12.059 -3.990 1.00 0.00 C ATOM 714 SD MET 90 23.194 13.159 -2.803 1.00 0.00 S ATOM 715 CE MET 90 22.660 14.488 -3.877 1.00 0.00 C TER 716 MET 90 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 715 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.18 61.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 43.26 72.9 118 100.0 118 ARMSMC SURFACE . . . . . . . . 66.33 56.5 108 100.0 108 ARMSMC BURIED . . . . . . . . 52.27 68.6 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.81 58.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 76.33 57.6 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 72.13 63.5 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 76.85 56.8 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 74.30 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.67 60.0 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 64.85 65.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 68.93 61.5 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 60.23 60.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 79.67 59.1 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.67 50.0 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 67.67 50.0 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 60.05 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 65.90 61.1 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 72.71 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.30 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 77.30 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 88.12 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.79 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 61.81 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.04 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.04 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0449 CRMSCA SECONDARY STRUCTURE . . 2.26 59 100.0 59 CRMSCA SURFACE . . . . . . . . 4.83 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.31 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.05 441 99.8 442 CRMSMC SECONDARY STRUCTURE . . 2.40 293 100.0 293 CRMSMC SURFACE . . . . . . . . 4.80 268 99.6 269 CRMSMC BURIED . . . . . . . . 2.45 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.17 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.32 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 3.98 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.39 204 100.0 204 CRMSSC BURIED . . . . . . . . 3.98 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.17 715 99.9 716 CRMSALL SECONDARY STRUCTURE . . 3.29 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.12 423 99.8 424 CRMSALL BURIED . . . . . . . . 3.33 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.118 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 1.937 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 3.866 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 1.943 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.128 1.000 0.500 441 99.8 442 ERRMC SECONDARY STRUCTURE . . 2.012 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 3.847 1.000 0.500 268 99.6 269 ERRMC BURIED . . . . . . . . 2.013 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.800 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 4.898 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.286 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 5.957 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.247 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.923 1.000 0.500 715 99.9 716 ERRALL SECONDARY STRUCTURE . . 2.649 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 4.804 1.000 0.500 423 99.8 424 ERRALL BURIED . . . . . . . . 2.647 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 16 40 58 74 88 90 90 DISTCA CA (P) 17.78 44.44 64.44 82.22 97.78 90 DISTCA CA (RMS) 0.77 1.29 1.76 2.43 3.65 DISTCA ALL (N) 95 238 393 521 670 715 716 DISTALL ALL (P) 13.27 33.24 54.89 72.77 93.58 716 DISTALL ALL (RMS) 0.79 1.27 1.82 2.53 4.03 DISTALL END of the results output