####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS382_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS382_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 21 - 58 4.98 11.80 LCS_AVERAGE: 36.65 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 28 - 42 1.99 13.11 LCS_AVERAGE: 11.42 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 30 - 40 0.75 14.21 LCS_AVERAGE: 6.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 5 19 3 3 7 9 10 11 14 17 20 24 25 28 30 32 39 40 40 46 49 51 LCS_GDT T 2 T 2 4 5 19 3 4 5 6 7 8 13 14 20 22 25 28 29 34 39 40 40 46 49 51 LCS_GDT D 3 D 3 4 5 19 3 4 4 4 5 7 8 10 12 14 16 19 24 26 27 35 39 46 49 51 LCS_GDT L 4 L 4 4 5 19 3 4 4 4 5 6 6 10 13 14 17 19 25 28 31 35 39 46 52 55 LCS_GDT V 5 V 5 4 5 19 3 4 4 4 5 9 10 13 14 15 19 24 30 40 45 49 51 55 56 59 LCS_GDT A 6 A 6 3 5 20 3 4 5 6 6 9 10 12 14 17 19 24 29 37 45 49 51 55 56 59 LCS_GDT V 7 V 7 3 7 35 3 3 4 5 8 9 10 11 13 17 19 20 26 28 31 41 48 53 55 57 LCS_GDT W 8 W 8 3 7 36 3 3 5 6 8 9 10 13 18 23 28 32 37 42 45 49 51 55 56 58 LCS_GDT D 9 D 9 4 8 36 3 3 5 7 8 12 14 17 22 27 30 33 37 42 45 49 53 55 56 59 LCS_GDT V 10 V 10 6 8 36 3 5 6 7 11 12 14 17 25 28 32 34 39 43 50 52 53 55 56 59 LCS_GDT A 11 A 11 6 8 36 3 5 6 7 8 12 12 17 25 28 32 34 39 43 50 52 53 55 56 59 LCS_GDT L 12 L 12 6 8 36 3 5 6 9 12 14 18 20 25 28 32 35 39 46 50 52 53 55 56 59 LCS_GDT S 13 S 13 6 11 36 3 5 6 7 15 18 19 20 24 28 32 34 38 43 50 52 53 55 56 59 LCS_GDT D 14 D 14 6 11 36 4 5 7 10 11 15 18 19 25 28 30 33 36 40 43 48 53 55 55 58 LCS_GDT G 15 G 15 6 11 36 4 4 8 12 15 18 19 20 22 24 30 32 34 38 39 41 45 46 54 57 LCS_GDT V 16 V 16 8 11 36 4 4 9 12 15 18 19 20 22 24 30 32 35 38 39 42 45 51 55 57 LCS_GDT H 17 H 17 8 11 36 4 6 8 10 15 18 19 20 25 28 30 33 37 42 45 51 53 55 56 59 LCS_GDT K 18 K 18 8 11 36 3 6 9 12 15 18 19 20 22 27 30 33 37 42 45 49 53 55 56 59 LCS_GDT I 19 I 19 8 11 36 4 6 9 12 15 18 19 20 25 28 32 36 41 46 50 52 55 55 56 59 LCS_GDT E 20 E 20 8 11 36 4 5 9 12 15 18 19 20 25 28 32 36 41 46 50 52 55 55 56 59 LCS_GDT F 21 F 21 8 11 38 4 6 9 12 15 18 19 20 25 31 34 40 42 47 50 52 55 55 56 59 LCS_GDT E 22 E 22 8 11 38 4 6 9 12 15 18 19 20 22 26 28 32 38 44 50 52 55 55 56 59 LCS_GDT H 23 H 23 8 11 38 3 6 9 12 15 18 19 20 22 28 33 38 41 47 50 52 55 55 56 59 LCS_GDT G 24 G 24 4 11 38 4 4 8 8 10 18 19 20 25 28 32 38 42 47 50 52 55 55 56 59 LCS_GDT T 25 T 25 4 6 38 4 4 6 6 10 16 18 23 28 31 34 40 42 47 50 52 55 55 56 59 LCS_GDT T 26 T 26 4 8 38 4 4 6 6 9 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT S 27 S 27 4 8 38 3 5 7 8 12 14 18 22 26 31 34 38 42 47 50 52 55 55 56 59 LCS_GDT G 28 G 28 5 15 38 4 7 10 13 14 15 16 19 25 29 34 38 41 47 50 52 55 55 56 59 LCS_GDT K 29 K 29 5 15 38 4 5 7 13 14 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT R 30 R 30 11 15 38 4 7 11 13 14 15 18 19 27 31 34 40 42 47 50 52 55 55 56 59 LCS_GDT V 31 V 31 11 15 38 7 10 11 13 14 15 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT V 32 V 32 11 15 38 7 10 11 13 14 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT Y 33 Y 33 11 15 38 5 10 11 13 14 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT V 34 V 34 11 15 38 7 10 11 13 14 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT D 35 D 35 11 15 38 7 10 11 13 14 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT G 36 G 36 11 15 38 7 10 11 13 14 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 37 K 37 11 15 38 7 10 11 13 14 15 18 22 28 31 34 40 42 47 50 52 55 55 56 59 LCS_GDT E 38 E 38 11 15 38 7 10 11 13 14 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT E 39 E 39 11 15 38 7 10 11 13 14 15 18 22 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT I 40 I 40 11 15 38 5 10 11 13 14 15 18 22 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT R 41 R 41 3 15 38 3 3 8 11 13 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 42 K 42 3 15 38 3 5 6 9 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT E 43 E 43 4 14 38 3 4 7 8 11 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT W 44 W 44 4 7 38 3 4 7 11 11 12 18 22 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT M 45 M 45 6 7 38 3 5 6 11 11 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT F 46 F 46 6 10 38 3 5 6 7 8 10 12 17 23 29 34 38 42 47 50 52 55 55 56 59 LCS_GDT K 47 K 47 6 10 38 3 5 6 7 8 14 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT L 48 L 48 6 10 38 3 5 6 7 8 9 16 20 24 30 35 40 42 47 50 52 55 55 56 59 LCS_GDT V 49 V 49 6 10 38 3 5 6 7 10 15 22 23 24 30 35 40 42 47 50 52 55 55 56 59 LCS_GDT G 50 G 50 6 10 38 3 4 6 8 12 15 22 23 24 30 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 51 K 51 4 10 38 3 4 6 8 12 15 22 23 25 30 35 40 42 47 50 52 55 55 56 59 LCS_GDT E 52 E 52 5 10 38 3 5 7 8 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT T 53 T 53 5 10 38 4 4 7 7 12 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT F 54 F 54 5 10 38 4 4 6 7 8 13 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT Y 55 Y 55 5 10 38 4 4 5 7 9 16 18 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT V 56 V 56 5 9 38 4 4 5 7 8 10 12 15 19 28 32 37 41 47 50 52 53 55 56 59 LCS_GDT G 57 G 57 3 9 38 3 3 3 6 9 10 14 21 26 31 34 38 42 47 50 52 55 55 56 59 LCS_GDT A 58 A 58 4 6 38 4 4 8 13 14 15 16 18 26 31 34 38 42 47 50 52 55 55 56 59 LCS_GDT A 59 A 59 4 11 37 4 4 8 9 10 14 15 23 27 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 60 K 60 4 11 32 4 5 7 11 15 18 19 20 22 24 30 34 39 43 45 51 55 55 56 59 LCS_GDT T 61 T 61 7 11 29 4 5 8 11 11 12 17 20 24 27 30 35 39 42 45 49 55 55 56 59 LCS_GDT K 62 K 62 7 11 29 3 5 8 11 11 18 19 19 22 26 27 33 39 41 45 48 50 52 53 57 LCS_GDT A 63 A 63 7 11 29 3 5 8 12 15 18 19 20 24 29 33 35 39 42 46 50 55 55 56 58 LCS_GDT T 64 T 64 7 11 29 3 5 9 12 15 18 19 20 22 24 25 33 39 41 45 48 50 52 53 54 LCS_GDT I 65 I 65 7 11 29 3 5 9 12 15 18 19 20 22 24 29 35 39 41 45 48 50 52 53 57 LCS_GDT N 66 N 66 7 11 29 3 5 8 12 15 18 19 20 22 24 25 28 32 41 45 48 50 52 53 54 LCS_GDT I 67 I 67 7 11 29 3 5 8 11 14 18 19 20 22 24 25 33 38 41 45 48 50 52 53 54 LCS_GDT D 68 D 68 6 11 29 3 5 8 11 15 18 19 20 22 24 25 28 32 37 44 48 50 52 53 54 LCS_GDT A 69 A 69 6 11 29 3 4 6 9 11 18 19 20 22 24 25 29 37 41 45 48 50 52 53 54 LCS_GDT I 70 I 70 5 11 29 3 4 5 6 15 18 19 20 22 24 25 28 32 37 44 47 50 52 53 54 LCS_GDT S 71 S 71 3 9 29 3 3 3 7 10 11 17 19 21 24 25 29 35 41 45 48 50 52 53 54 LCS_GDT G 72 G 72 3 11 29 3 3 6 7 10 12 15 17 21 23 24 29 33 41 45 48 50 52 53 54 LCS_GDT F 73 F 73 7 11 29 3 6 7 8 11 12 16 19 21 23 24 27 37 41 45 48 50 52 53 54 LCS_GDT A 74 A 74 7 11 29 3 6 7 8 11 13 16 19 21 23 24 30 37 41 45 48 50 52 53 54 LCS_GDT Y 75 Y 75 7 11 29 3 6 7 8 11 14 18 19 21 23 27 34 39 41 45 48 50 52 53 54 LCS_GDT E 76 E 76 7 11 29 4 6 7 9 12 14 18 19 21 23 28 34 39 41 45 48 50 52 53 54 LCS_GDT Y 77 Y 77 7 11 29 3 6 7 9 12 14 18 19 24 29 33 35 39 41 45 48 51 54 56 57 LCS_GDT T 78 T 78 7 11 29 3 6 7 9 12 14 18 19 22 27 32 35 39 41 45 48 50 53 56 57 LCS_GDT L 79 L 79 7 11 29 3 5 7 9 12 14 18 22 27 31 34 40 42 47 49 52 55 55 56 58 LCS_GDT E 80 E 80 5 11 29 3 5 6 9 12 14 18 22 24 31 34 38 42 47 49 51 55 55 56 58 LCS_GDT I 81 I 81 5 11 29 3 5 6 7 12 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT N 82 N 82 4 11 29 4 5 7 9 12 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT G 83 G 83 4 7 29 4 5 7 8 12 15 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 84 K 84 4 7 29 4 5 7 8 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT S 85 S 85 4 7 29 4 5 7 8 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT L 86 L 86 4 7 29 3 3 4 8 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 87 K 87 4 7 29 3 5 7 8 12 16 22 23 28 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT K 88 K 88 4 7 20 3 4 4 6 9 15 22 23 25 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT Y 89 Y 89 4 7 19 3 4 4 5 12 15 22 23 26 31 35 40 42 47 50 52 55 55 56 59 LCS_GDT M 90 M 90 4 7 16 3 4 4 6 9 15 22 23 24 27 31 36 41 46 50 52 55 55 56 59 LCS_AVERAGE LCS_A: 18.25 ( 6.67 11.42 36.65 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 11 13 15 18 22 23 28 31 35 40 42 47 50 52 55 55 56 59 GDT PERCENT_AT 7.78 11.11 12.22 14.44 16.67 20.00 24.44 25.56 31.11 34.44 38.89 44.44 46.67 52.22 55.56 57.78 61.11 61.11 62.22 65.56 GDT RMS_LOCAL 0.31 0.59 0.75 1.32 1.61 2.01 7.21 2.81 3.39 3.59 3.90 4.23 4.47 4.79 5.10 5.28 5.47 5.47 5.56 6.31 GDT RMS_ALL_AT 14.69 14.71 14.21 13.46 14.69 14.43 13.05 12.83 11.72 11.73 12.10 12.00 11.75 11.84 11.86 11.79 11.99 11.99 11.93 12.01 # Checking swapping # possible swapping detected: D 14 D 14 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 38 E 38 # possible swapping detected: D 68 D 68 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 17.027 0 0.043 1.095 18.336 0.000 0.000 LGA T 2 T 2 18.975 0 0.333 0.318 21.258 0.000 0.000 LGA D 3 D 3 17.131 0 0.622 0.855 20.691 0.000 0.000 LGA L 4 L 4 15.814 0 0.427 0.888 19.033 0.000 0.000 LGA V 5 V 5 11.906 0 0.311 1.140 13.251 0.000 0.680 LGA A 6 A 6 14.037 0 0.644 0.594 17.387 0.000 0.000 LGA V 7 V 7 18.157 0 0.686 0.597 22.257 0.000 0.000 LGA W 8 W 8 15.288 0 0.462 1.284 15.857 0.000 0.000 LGA D 9 D 9 15.140 0 0.489 1.186 17.476 0.000 0.000 LGA V 10 V 10 13.834 0 0.652 0.666 15.019 0.000 0.000 LGA A 11 A 11 13.418 0 0.433 0.413 13.418 0.000 0.000 LGA L 12 L 12 13.633 0 0.275 0.378 15.356 0.000 0.000 LGA S 13 S 13 15.657 0 0.120 0.606 19.309 0.000 0.000 LGA D 14 D 14 21.077 0 0.423 1.141 23.148 0.000 0.000 LGA G 15 G 15 23.579 0 0.371 0.371 23.579 0.000 0.000 LGA V 16 V 16 19.975 0 0.059 1.026 23.877 0.000 0.000 LGA H 17 H 17 13.827 0 0.229 0.715 15.822 0.000 0.000 LGA K 18 K 18 13.067 0 0.220 1.017 17.819 0.000 0.000 LGA I 19 I 19 6.832 0 0.023 0.653 8.995 9.167 21.429 LGA E 20 E 20 6.478 0 0.140 0.795 14.744 18.452 8.360 LGA F 21 F 21 5.587 0 0.041 1.226 7.665 25.357 20.649 LGA E 22 E 22 9.596 0 0.379 0.928 14.937 0.833 0.370 LGA H 23 H 23 11.156 0 0.514 0.642 16.740 0.357 0.143 LGA G 24 G 24 11.635 0 0.558 0.558 11.858 0.000 0.000 LGA T 25 T 25 10.348 0 0.218 1.109 11.444 0.000 0.748 LGA T 26 T 26 9.612 0 0.119 0.326 10.890 0.238 0.748 LGA S 27 S 27 12.370 0 0.490 0.811 14.271 0.000 0.000 LGA G 28 G 28 11.888 0 0.540 0.540 11.888 0.000 0.000 LGA K 29 K 29 6.345 0 0.073 0.861 7.888 11.905 39.101 LGA R 30 R 30 7.258 0 0.047 0.733 18.504 20.238 7.489 LGA V 31 V 31 4.042 0 0.192 0.234 5.578 30.476 36.054 LGA V 32 V 32 3.392 0 0.093 0.081 6.337 63.571 48.571 LGA Y 33 Y 33 2.378 0 0.176 0.294 7.255 62.857 36.667 LGA V 34 V 34 3.167 0 0.025 0.049 5.911 40.000 37.211 LGA D 35 D 35 6.792 0 0.116 0.223 8.789 12.381 9.583 LGA G 36 G 36 8.206 0 0.073 0.073 8.568 6.190 6.190 LGA K 37 K 37 7.511 0 0.023 1.167 10.527 17.500 8.677 LGA E 38 E 38 4.505 0 0.045 1.061 6.473 24.048 31.111 LGA E 39 E 39 5.541 0 0.045 0.528 8.178 20.000 15.979 LGA I 40 I 40 5.980 0 0.418 0.835 8.057 25.000 17.381 LGA R 41 R 41 3.554 0 0.144 1.110 12.803 39.048 17.532 LGA K 42 K 42 1.781 0 0.497 1.046 9.678 77.143 44.974 LGA E 43 E 43 3.466 0 0.081 1.109 7.065 52.024 33.333 LGA W 44 W 44 5.124 0 0.227 1.264 12.048 24.524 9.354 LGA M 45 M 45 7.238 0 0.293 1.214 9.665 14.167 9.464 LGA F 46 F 46 11.124 0 0.039 1.325 17.913 0.119 0.043 LGA K 47 K 47 6.974 0 0.241 1.236 8.417 21.905 19.788 LGA L 48 L 48 5.169 0 0.332 0.391 9.501 38.929 23.333 LGA V 49 V 49 3.347 0 0.321 1.131 5.759 54.762 48.639 LGA G 50 G 50 2.242 0 0.416 0.416 4.486 54.048 54.048 LGA K 51 K 51 2.438 0 0.368 0.935 4.081 68.929 57.831 LGA E 52 E 52 1.278 0 0.061 1.276 6.473 88.333 56.772 LGA T 53 T 53 0.704 0 0.092 0.975 3.414 75.476 73.537 LGA F 54 F 54 3.003 0 0.127 1.346 7.971 47.381 27.662 LGA Y 55 Y 55 6.419 0 0.185 1.239 9.064 12.381 27.262 LGA V 56 V 56 12.119 0 0.590 0.563 16.170 0.119 0.068 LGA G 57 G 57 11.898 0 0.469 0.469 12.084 1.190 1.190 LGA A 58 A 58 10.505 0 0.598 0.543 12.812 0.833 0.667 LGA A 59 A 59 4.910 0 0.535 0.499 6.452 25.238 31.619 LGA K 60 K 60 8.154 0 0.159 0.527 14.737 6.667 2.963 LGA T 61 T 61 6.266 0 0.275 1.055 7.105 15.476 20.884 LGA K 62 K 62 9.844 0 0.026 1.018 18.350 3.214 1.429 LGA A 63 A 63 6.708 0 0.243 0.262 9.320 6.190 12.381 LGA T 64 T 64 12.375 0 0.054 0.464 17.164 0.000 0.000 LGA I 65 I 65 11.859 0 0.077 1.264 15.604 0.000 2.738 LGA N 66 N 66 18.029 0 0.106 0.714 23.365 0.000 0.000 LGA I 67 I 67 17.558 0 0.051 0.154 22.017 0.000 0.000 LGA D 68 D 68 23.373 0 0.149 1.047 24.637 0.000 0.000 LGA A 69 A 69 24.849 0 0.047 0.061 28.615 0.000 0.000 LGA I 70 I 70 27.469 0 0.694 0.570 29.043 0.000 0.000 LGA S 71 S 71 30.759 0 0.640 0.764 31.438 0.000 0.000 LGA G 72 G 72 31.161 0 0.160 0.160 31.161 0.000 0.000 LGA F 73 F 73 28.757 0 0.465 0.532 33.918 0.000 0.000 LGA A 74 A 74 25.080 0 0.120 0.143 27.005 0.000 0.000 LGA Y 75 Y 75 21.077 0 0.035 1.281 25.281 0.000 0.000 LGA E 76 E 76 18.809 0 0.089 1.314 21.861 0.000 0.000 LGA Y 77 Y 77 13.055 0 0.344 1.177 14.905 0.000 0.000 LGA T 78 T 78 13.115 0 0.181 1.095 16.757 0.000 0.000 LGA L 79 L 79 6.804 0 0.285 0.605 8.842 9.167 27.440 LGA E 80 E 80 6.352 0 0.027 0.933 13.538 28.690 13.704 LGA I 81 I 81 2.788 0 0.091 0.124 4.325 48.690 48.631 LGA N 82 N 82 2.623 0 0.591 1.248 6.498 62.976 48.393 LGA G 83 G 83 1.536 0 0.392 0.392 2.236 72.976 72.976 LGA K 84 K 84 1.332 0 0.035 0.732 5.722 77.143 60.265 LGA S 85 S 85 2.245 0 0.071 0.721 3.036 77.381 70.714 LGA L 86 L 86 1.306 0 0.257 0.774 7.091 86.071 55.476 LGA K 87 K 87 3.256 0 0.616 1.233 10.879 59.286 31.111 LGA K 88 K 88 3.410 0 0.106 1.159 10.364 50.357 26.349 LGA Y 89 Y 89 2.506 0 0.173 1.537 11.967 60.952 28.214 LGA M 90 M 90 3.265 1 0.058 0.799 5.183 33.333 43.274 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 359 99.72 716 715 99.86 90 SUMMARY(RMSD_GDC): 11.225 11.139 11.599 19.819 16.124 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 23 2.81 27.222 23.479 0.791 LGA_LOCAL RMSD: 2.809 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.827 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 11.225 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.932748 * X + -0.312650 * Y + 0.179530 * Z + -8.292985 Y_new = -0.263341 * X + -0.250725 * Y + 0.931552 * Z + -0.329518 Z_new = -0.246237 * X + -0.916180 * Y + -0.316197 * Z + 73.190758 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.275166 0.248796 -1.903122 [DEG: -15.7659 14.2550 -109.0408 ] ZXZ: 2.951205 1.892514 -2.879032 [DEG: 169.0916 108.4331 -164.9564 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS382_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS382_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 23 2.81 23.479 11.23 REMARK ---------------------------------------------------------- MOLECULE T0540TS382_1-D1 USER MOD reduce.3.15.091106 removed 723 hydrogens (0 hets) REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFR REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2kd2_A ATOM 1 N MET 1 26.379 19.309 5.456 1.00 99.99 N ATOM 5 CA MET 1 25.859 19.008 6.823 1.00 99.99 C ATOM 7 CB MET 1 26.857 19.523 7.902 1.00 99.99 C ATOM 10 CG MET 1 28.233 18.824 7.900 1.00 99.99 C ATOM 13 SD MET 1 28.174 17.008 8.001 1.00 99.99 S ATOM 14 CE MET 1 27.600 16.878 9.719 1.00 99.99 C ATOM 18 C MET 1 24.477 19.622 7.062 1.00 99.99 C ATOM 19 O MET 1 24.340 20.577 7.821 1.00 99.99 O ATOM 20 N THR 2 23.429 19.089 6.392 1.00 99.99 N ATOM 22 CA THR 2 22.089 19.651 6.152 1.00 99.99 C ATOM 24 CB THR 2 21.274 20.200 7.335 1.00 99.99 C ATOM 26 OG1 THR 2 21.828 21.362 7.935 1.00 99.99 O ATOM 28 CG2 THR 2 21.161 19.135 8.432 1.00 99.99 C ATOM 32 C THR 2 22.147 20.608 4.975 1.00 99.99 C ATOM 33 O THR 2 21.940 20.225 3.821 1.00 99.99 O ATOM 34 N ASP 3 22.519 21.872 5.222 1.00 99.99 N ATOM 36 CA ASP 3 23.320 22.626 4.284 1.00 99.99 C ATOM 38 CB ASP 3 22.612 23.909 3.756 1.00 99.99 C ATOM 41 CG ASP 3 23.470 24.554 2.682 1.00 99.99 C ATOM 42 OD1 ASP 3 23.676 23.938 1.612 1.00 99.99 O ATOM 43 OD2 ASP 3 24.085 25.605 2.994 1.00 99.99 O ATOM 44 C ASP 3 24.688 22.866 4.926 1.00 99.99 C ATOM 45 O ASP 3 25.470 21.931 5.118 1.00 99.99 O ATOM 46 N LEU 4 25.013 24.143 5.204 1.00 99.99 N ATOM 48 CA LEU 4 26.339 24.649 5.496 1.00 99.99 C ATOM 50 CB LEU 4 26.916 24.200 6.867 1.00 99.99 C ATOM 53 CG LEU 4 26.204 24.739 8.137 1.00 99.99 C ATOM 55 CD1 LEU 4 26.145 26.274 8.168 1.00 99.99 C ATOM 59 CD2 LEU 4 24.813 24.135 8.388 1.00 99.99 C ATOM 63 C LEU 4 27.277 24.375 4.326 1.00 99.99 C ATOM 64 O LEU 4 28.456 24.079 4.491 1.00 99.99 O ATOM 65 N VAL 5 26.730 24.474 3.100 1.00 99.99 N ATOM 67 CA VAL 5 27.442 24.316 1.848 1.00 99.99 C ATOM 69 CB VAL 5 27.157 23.004 1.116 1.00 99.99 C ATOM 71 CG1 VAL 5 27.988 22.950 -0.182 1.00 99.99 C ATOM 75 CG2 VAL 5 27.532 21.819 2.027 1.00 99.99 C ATOM 79 C VAL 5 27.074 25.507 0.998 1.00 99.99 C ATOM 80 O VAL 5 27.908 26.368 0.777 1.00 99.99 O ATOM 81 N ALA 6 25.806 25.673 0.575 1.00 99.99 N ATOM 83 CA ALA 6 25.389 26.836 -0.198 1.00 99.99 C ATOM 85 CB ALA 6 23.942 26.609 -0.681 1.00 99.99 C ATOM 89 C ALA 6 25.480 28.154 0.584 1.00 99.99 C ATOM 90 O ALA 6 25.676 29.236 0.038 1.00 99.99 O ATOM 91 N VAL 7 25.371 28.074 1.922 1.00 99.99 N ATOM 93 CA VAL 7 25.648 29.177 2.832 1.00 99.99 C ATOM 95 CB VAL 7 24.911 28.922 4.156 1.00 99.99 C ATOM 97 CG1 VAL 7 25.127 30.044 5.192 1.00 99.99 C ATOM 101 CG2 VAL 7 23.399 28.801 3.871 1.00 99.99 C ATOM 105 C VAL 7 27.159 29.391 3.060 1.00 99.99 C ATOM 106 O VAL 7 27.597 30.424 3.567 1.00 99.99 O ATOM 107 N TRP 8 28.016 28.415 2.700 1.00 99.99 N ATOM 109 CA TRP 8 29.382 28.357 3.193 1.00 99.99 C ATOM 111 CB TRP 8 29.336 27.579 4.549 1.00 99.99 C ATOM 114 CG TRP 8 30.570 27.592 5.443 1.00 99.99 C ATOM 115 CD1 TRP 8 31.358 26.539 5.818 1.00 99.99 C ATOM 117 NE1 TRP 8 32.390 26.968 6.625 1.00 99.99 N ATOM 119 CE2 TRP 8 32.259 28.330 6.798 1.00 99.99 C ATOM 120 CD2 TRP 8 31.116 28.755 6.087 1.00 99.99 C ATOM 121 CE3 TRP 8 30.716 30.091 6.091 1.00 99.99 C ATOM 123 CZ3 TRP 8 31.490 31.003 6.824 1.00 99.99 C ATOM 125 CZ2 TRP 8 33.028 29.237 7.510 1.00 99.99 C ATOM 127 CH2 TRP 8 32.631 30.583 7.523 1.00 99.99 H ATOM 129 C TRP 8 30.367 27.708 2.206 1.00 99.99 C ATOM 130 O TRP 8 31.238 26.939 2.609 1.00 99.99 O ATOM 131 N ASP 9 30.294 27.989 0.884 1.00 99.99 N ATOM 133 CA ASP 9 31.254 27.451 -0.072 1.00 99.99 C ATOM 135 CB ASP 9 30.697 26.238 -0.877 1.00 99.99 C ATOM 138 CG ASP 9 29.517 26.452 -1.803 1.00 99.99 C ATOM 139 OD1 ASP 9 29.190 27.597 -2.195 1.00 99.99 O ATOM 140 OD2 ASP 9 29.005 25.396 -2.254 1.00 99.99 O ATOM 141 C ASP 9 32.018 28.491 -0.884 1.00 99.99 C ATOM 142 O ASP 9 33.059 28.962 -0.428 1.00 99.99 O ATOM 143 N VAL 10 31.561 28.833 -2.103 1.00 99.99 N ATOM 145 CA VAL 10 32.136 29.721 -3.123 1.00 99.99 C ATOM 147 CB VAL 10 31.798 31.204 -2.943 1.00 99.99 C ATOM 149 CG1 VAL 10 30.272 31.372 -3.081 1.00 99.99 C ATOM 153 CG2 VAL 10 32.281 31.756 -1.588 1.00 99.99 C ATOM 157 C VAL 10 33.589 29.502 -3.589 1.00 99.99 C ATOM 158 O VAL 10 33.925 29.739 -4.751 1.00 99.99 O ATOM 159 N ALA 11 34.491 29.034 -2.706 1.00 99.99 N ATOM 161 CA ALA 11 35.853 28.615 -2.986 1.00 99.99 C ATOM 163 CB ALA 11 35.891 27.383 -3.914 1.00 99.99 C ATOM 167 C ALA 11 36.783 29.729 -3.451 1.00 99.99 C ATOM 168 O ALA 11 37.542 29.574 -4.410 1.00 99.99 O ATOM 169 N LEU 12 36.749 30.875 -2.744 1.00 99.99 N ATOM 171 CA LEU 12 37.493 32.084 -3.058 1.00 99.99 C ATOM 173 CB LEU 12 36.756 33.326 -2.504 1.00 99.99 C ATOM 176 CG LEU 12 35.306 33.488 -3.008 1.00 99.99 C ATOM 178 CD1 LEU 12 34.647 34.675 -2.293 1.00 99.99 C ATOM 182 CD2 LEU 12 35.219 33.673 -4.531 1.00 99.99 C ATOM 186 C LEU 12 38.949 32.021 -2.587 1.00 99.99 C ATOM 187 O LEU 12 39.708 31.171 -3.047 1.00 99.99 O ATOM 188 N SER 13 39.406 32.922 -1.707 1.00 99.99 N ATOM 190 CA SER 13 40.759 32.849 -1.149 1.00 99.99 C ATOM 192 CB SER 13 41.682 33.963 -1.722 1.00 99.99 C ATOM 195 OG SER 13 42.079 33.719 -3.073 1.00 99.99 O ATOM 197 C SER 13 40.676 33.094 0.343 1.00 99.99 C ATOM 198 O SER 13 41.092 32.312 1.199 1.00 99.99 O ATOM 199 N ASP 14 40.079 34.246 0.639 1.00 99.99 N ATOM 201 CA ASP 14 39.647 34.873 1.857 1.00 99.99 C ATOM 203 CB ASP 14 38.869 36.144 1.378 1.00 99.99 C ATOM 206 CG ASP 14 37.941 35.802 0.209 1.00 99.99 C ATOM 207 OD1 ASP 14 38.460 35.644 -0.925 1.00 99.99 O ATOM 208 OD2 ASP 14 36.757 35.508 0.493 1.00 99.99 O ATOM 209 C ASP 14 38.792 34.001 2.788 1.00 99.99 C ATOM 210 O ASP 14 39.242 33.552 3.847 1.00 99.99 O ATOM 211 N GLY 15 37.514 33.781 2.428 1.00 99.99 N ATOM 213 CA GLY 15 36.483 33.134 3.223 1.00 99.99 C ATOM 216 C GLY 15 36.595 31.642 3.371 1.00 99.99 C ATOM 217 O GLY 15 37.116 31.154 4.375 1.00 99.99 O ATOM 218 N VAL 16 36.046 30.870 2.420 1.00 99.99 N ATOM 220 CA VAL 16 35.816 29.446 2.622 1.00 99.99 C ATOM 222 CB VAL 16 34.341 29.130 2.910 1.00 99.99 C ATOM 224 CG1 VAL 16 34.219 27.748 3.575 1.00 99.99 C ATOM 228 CG2 VAL 16 33.716 30.171 3.860 1.00 99.99 C ATOM 232 C VAL 16 36.284 28.624 1.424 1.00 99.99 C ATOM 233 O VAL 16 36.160 29.025 0.270 1.00 99.99 O ATOM 234 N HIS 17 36.843 27.426 1.679 1.00 99.99 N ATOM 236 CA HIS 17 36.936 26.333 0.724 1.00 99.99 C ATOM 238 CB HIS 17 38.381 25.785 0.544 1.00 99.99 C ATOM 241 ND1 HIS 17 40.370 25.972 -0.999 1.00 99.99 N ATOM 243 CG HIS 17 39.210 26.505 -0.477 1.00 99.99 C ATOM 244 CE1 HIS 17 40.812 26.833 -1.941 1.00 99.99 C ATOM 246 NE2 HIS 17 40.019 27.880 -2.062 1.00 99.99 N ATOM 247 CD2 HIS 17 39.017 27.683 -1.130 1.00 99.99 C ATOM 249 C HIS 17 36.121 25.190 1.291 1.00 99.99 C ATOM 250 O HIS 17 36.590 24.483 2.179 1.00 99.99 O ATOM 251 N LYS 18 34.876 24.954 0.824 1.00 99.99 N ATOM 253 CA LYS 18 34.053 23.926 1.444 1.00 99.99 C ATOM 255 CB LYS 18 32.544 24.073 1.161 1.00 99.99 C ATOM 258 CG LYS 18 31.658 23.150 2.023 1.00 99.99 C ATOM 261 CD LYS 18 31.588 23.613 3.485 1.00 99.99 C ATOM 264 CE LYS 18 31.059 22.560 4.462 1.00 99.99 C ATOM 267 NZ LYS 18 32.121 21.649 4.916 1.00 99.99 N ATOM 271 C LYS 18 34.444 22.502 1.100 1.00 99.99 C ATOM 272 O LYS 18 33.961 21.891 0.151 1.00 99.99 O ATOM 273 N ILE 19 35.312 21.905 1.921 1.00 99.99 N ATOM 275 CA ILE 19 35.624 20.497 1.820 1.00 99.99 C ATOM 277 CB ILE 19 37.021 20.171 2.327 1.00 99.99 C ATOM 279 CG2 ILE 19 37.395 18.729 1.909 1.00 99.99 C ATOM 283 CG1 ILE 19 38.064 21.203 1.830 1.00 99.99 C ATOM 286 CD1 ILE 19 38.178 21.362 0.306 1.00 99.99 C ATOM 290 C ILE 19 34.580 19.710 2.586 1.00 99.99 C ATOM 291 O ILE 19 34.211 20.074 3.702 1.00 99.99 O ATOM 292 N GLU 20 34.050 18.642 1.974 1.00 99.99 N ATOM 294 CA GLU 20 33.133 17.691 2.561 1.00 99.99 C ATOM 296 CB GLU 20 31.738 18.333 2.795 1.00 99.99 C ATOM 299 CG GLU 20 30.849 17.663 3.875 1.00 99.99 C ATOM 302 CD GLU 20 29.945 18.683 4.561 1.00 99.99 C ATOM 303 OE1 GLU 20 28.699 18.607 4.422 1.00 99.99 O ATOM 304 OE2 GLU 20 30.501 19.583 5.249 1.00 99.99 O ATOM 305 C GLU 20 33.145 16.553 1.546 1.00 99.99 C ATOM 306 O GLU 20 33.663 16.751 0.444 1.00 99.99 O ATOM 307 N PHE 21 32.664 15.333 1.864 1.00 99.99 N ATOM 309 CA PHE 21 32.797 14.220 0.927 1.00 99.99 C ATOM 311 CB PHE 21 34.273 13.733 0.741 1.00 99.99 C ATOM 314 CG PHE 21 35.007 13.552 2.044 1.00 99.99 C ATOM 315 CD1 PHE 21 35.819 14.577 2.559 1.00 99.99 C ATOM 317 CE1 PHE 21 36.479 14.417 3.784 1.00 99.99 C ATOM 319 CZ PHE 21 36.344 13.219 4.497 1.00 99.99 C ATOM 321 CD2 PHE 21 34.893 12.353 2.762 1.00 99.99 C ATOM 323 CE2 PHE 21 35.555 12.183 3.983 1.00 99.99 C ATOM 325 C PHE 21 31.885 13.035 1.238 1.00 99.99 C ATOM 326 O PHE 21 31.777 12.569 2.374 1.00 99.99 O ATOM 327 N GLU 22 31.215 12.489 0.204 1.00 99.99 N ATOM 329 CA GLU 22 30.362 11.318 0.290 1.00 99.99 C ATOM 331 CB GLU 22 29.330 11.291 -0.867 1.00 99.99 C ATOM 334 CG GLU 22 28.298 12.445 -0.845 1.00 99.99 C ATOM 337 CD GLU 22 28.771 13.767 -1.411 1.00 99.99 C ATOM 338 OE1 GLU 22 27.959 14.725 -1.374 1.00 99.99 O ATOM 339 OE2 GLU 22 29.916 13.901 -1.920 1.00 99.99 O ATOM 340 C GLU 22 31.120 9.987 0.279 1.00 99.99 C ATOM 341 O GLU 22 30.974 9.156 -0.610 1.00 99.99 O ATOM 342 N HIS 23 31.915 9.709 1.325 1.00 99.99 N ATOM 344 CA HIS 23 32.536 8.406 1.536 1.00 99.99 C ATOM 346 CB HIS 23 34.003 8.625 2.015 1.00 99.99 C ATOM 349 ND1 HIS 23 35.195 6.346 1.890 1.00 99.99 N ATOM 351 CG HIS 23 34.724 7.435 2.591 1.00 99.99 C ATOM 352 CE1 HIS 23 35.676 5.463 2.800 1.00 99.99 C ATOM 354 NE2 HIS 23 35.554 5.912 4.039 1.00 99.99 N ATOM 355 CD2 HIS 23 34.948 7.152 3.901 1.00 99.99 C ATOM 357 C HIS 23 31.729 7.617 2.566 1.00 99.99 C ATOM 358 O HIS 23 32.177 6.643 3.163 1.00 99.99 O ATOM 359 N GLY 24 30.491 8.051 2.878 1.00 99.99 N ATOM 361 CA GLY 24 29.755 7.569 4.052 1.00 99.99 C ATOM 364 C GLY 24 30.215 8.302 5.285 1.00 99.99 C ATOM 365 O GLY 24 29.429 8.923 5.990 1.00 99.99 O ATOM 366 N THR 25 31.537 8.268 5.533 1.00 99.99 N ATOM 368 CA THR 25 32.281 9.278 6.290 1.00 99.99 C ATOM 370 CB THR 25 32.069 10.707 5.791 1.00 99.99 C ATOM 372 OG1 THR 25 32.457 10.772 4.423 1.00 99.99 O ATOM 374 CG2 THR 25 32.955 11.714 6.537 1.00 99.99 C ATOM 378 C THR 25 32.177 9.167 7.792 1.00 99.99 C ATOM 379 O THR 25 33.196 9.078 8.470 1.00 99.99 O ATOM 380 N THR 26 30.959 9.127 8.357 1.00 99.99 N ATOM 382 CA THR 26 30.654 9.092 9.794 1.00 99.99 C ATOM 384 CB THR 26 29.151 9.092 10.050 1.00 99.99 C ATOM 386 OG1 THR 26 28.531 10.034 9.189 1.00 99.99 O ATOM 388 CG2 THR 26 28.828 9.547 11.479 1.00 99.99 C ATOM 392 C THR 26 31.289 7.938 10.559 1.00 99.99 C ATOM 393 O THR 26 31.537 7.996 11.762 1.00 99.99 O ATOM 394 N SER 27 31.630 6.835 9.868 1.00 99.99 N ATOM 396 CA SER 27 32.441 5.775 10.456 1.00 99.99 C ATOM 398 CB SER 27 32.287 4.423 9.712 1.00 99.99 C ATOM 401 OG SER 27 32.851 3.351 10.470 1.00 99.99 O ATOM 403 C SER 27 33.917 6.172 10.525 1.00 99.99 C ATOM 404 O SER 27 34.696 5.960 9.590 1.00 99.99 O ATOM 405 N GLY 28 34.317 6.801 11.652 1.00 99.99 N ATOM 407 CA GLY 28 35.688 7.224 11.938 1.00 99.99 C ATOM 410 C GLY 28 35.994 8.622 11.463 1.00 99.99 C ATOM 411 O GLY 28 35.922 8.910 10.272 1.00 99.99 O ATOM 412 N LYS 29 36.378 9.547 12.371 1.00 99.99 N ATOM 414 CA LYS 29 36.770 10.897 11.983 1.00 99.99 C ATOM 416 CB LYS 29 36.737 11.902 13.170 1.00 99.99 C ATOM 419 CG LYS 29 37.199 13.342 12.833 1.00 99.99 C ATOM 422 CD LYS 29 38.655 13.635 13.264 1.00 99.99 C ATOM 425 CE LYS 29 39.304 14.862 12.603 1.00 99.99 C ATOM 428 NZ LYS 29 38.634 16.112 12.981 1.00 99.99 N ATOM 432 C LYS 29 38.138 10.908 11.321 1.00 99.99 C ATOM 433 O LYS 29 39.127 10.455 11.885 1.00 99.99 O ATOM 434 N ARG 30 38.194 11.419 10.083 1.00 99.99 N ATOM 436 CA ARG 30 39.362 11.354 9.234 1.00 99.99 C ATOM 438 CB ARG 30 38.894 11.164 7.770 1.00 99.99 C ATOM 441 CG ARG 30 37.897 10.000 7.596 1.00 99.99 C ATOM 444 CD ARG 30 38.429 8.644 8.082 1.00 99.99 C ATOM 447 NE ARG 30 37.260 7.708 8.080 1.00 99.99 N ATOM 449 CZ ARG 30 36.791 7.113 6.986 1.00 99.99 C ATOM 450 NH1 ARG 30 37.425 7.128 5.825 1.00 99.99 H ATOM 453 NH2 ARG 30 35.641 6.455 7.046 1.00 99.99 H ATOM 456 C ARG 30 40.232 12.592 9.350 1.00 99.99 C ATOM 457 O ARG 30 39.736 13.698 9.559 1.00 99.99 O ATOM 458 N VAL 31 41.552 12.428 9.205 1.00 99.99 N ATOM 460 CA VAL 31 42.557 13.470 9.331 1.00 99.99 C ATOM 462 CB VAL 31 43.789 12.977 10.088 1.00 99.99 C ATOM 464 CG1 VAL 31 44.754 14.148 10.352 1.00 99.99 C ATOM 468 CG2 VAL 31 43.353 12.349 11.428 1.00 99.99 C ATOM 472 C VAL 31 42.911 13.928 7.927 1.00 99.99 C ATOM 473 O VAL 31 43.856 13.469 7.286 1.00 99.99 O ATOM 474 N VAL 32 42.088 14.828 7.361 1.00 99.99 N ATOM 476 CA VAL 32 42.062 15.020 5.921 1.00 99.99 C ATOM 478 CB VAL 32 40.663 15.289 5.386 1.00 99.99 C ATOM 480 CG1 VAL 32 40.656 15.273 3.843 1.00 99.99 C ATOM 484 CG2 VAL 32 39.725 14.195 5.920 1.00 99.99 C ATOM 488 C VAL 32 43.000 16.112 5.457 1.00 99.99 C ATOM 489 O VAL 32 42.809 17.301 5.722 1.00 99.99 O ATOM 490 N TYR 33 44.031 15.712 4.694 1.00 99.99 N ATOM 492 CA TYR 33 45.009 16.612 4.126 1.00 99.99 C ATOM 494 CB TYR 33 46.397 15.937 3.998 1.00 99.99 C ATOM 497 CG TYR 33 46.954 15.739 5.380 1.00 99.99 C ATOM 498 CD1 TYR 33 46.720 14.551 6.092 1.00 99.99 C ATOM 500 CE1 TYR 33 47.167 14.413 7.413 1.00 99.99 C ATOM 502 CZ TYR 33 47.853 15.461 8.032 1.00 99.99 C ATOM 503 OH TYR 33 48.267 15.328 9.371 1.00 99.99 H ATOM 505 CD2 TYR 33 47.654 16.782 6.009 1.00 99.99 C ATOM 507 CE2 TYR 33 48.103 16.646 7.331 1.00 99.99 C ATOM 509 C TYR 33 44.539 17.153 2.783 1.00 99.99 C ATOM 510 O TYR 33 44.582 16.478 1.758 1.00 99.99 O ATOM 511 N VAL 34 44.062 18.405 2.774 1.00 99.99 N ATOM 513 CA VAL 34 43.520 19.119 1.630 1.00 99.99 C ATOM 515 CB VAL 34 42.246 19.852 2.012 1.00 99.99 C ATOM 517 CG1 VAL 34 41.648 20.642 0.831 1.00 99.99 C ATOM 521 CG2 VAL 34 41.236 18.832 2.570 1.00 99.99 C ATOM 525 C VAL 34 44.540 20.146 1.198 1.00 99.99 C ATOM 526 O VAL 34 44.926 21.018 1.982 1.00 99.99 O ATOM 527 N ASP 35 45.055 20.048 -0.041 1.00 99.99 N ATOM 529 CA ASP 35 46.124 20.898 -0.559 1.00 99.99 C ATOM 531 CB ASP 35 45.723 22.399 -0.682 1.00 99.99 C ATOM 534 CG ASP 35 44.281 22.615 -1.097 1.00 99.99 C ATOM 535 OD1 ASP 35 43.891 22.163 -2.194 1.00 99.99 O ATOM 536 OD2 ASP 35 43.548 23.272 -0.301 1.00 99.99 O ATOM 537 C ASP 35 47.446 20.786 0.232 1.00 99.99 C ATOM 538 O ASP 35 48.336 21.624 0.127 1.00 99.99 O ATOM 539 N GLY 36 47.582 19.747 1.088 1.00 99.99 N ATOM 541 CA GLY 36 48.678 19.608 2.051 1.00 99.99 C ATOM 544 C GLY 36 48.329 20.043 3.459 1.00 99.99 C ATOM 545 O GLY 36 49.059 19.769 4.405 1.00 99.99 O ATOM 546 N LYS 37 47.196 20.732 3.661 1.00 99.99 N ATOM 548 CA LYS 37 46.775 21.243 4.955 1.00 99.99 C ATOM 550 CB LYS 37 45.945 22.544 4.779 1.00 99.99 C ATOM 553 CG LYS 37 46.589 23.648 3.925 1.00 99.99 C ATOM 556 CD LYS 37 45.618 24.820 3.665 1.00 99.99 C ATOM 559 CE LYS 37 44.822 24.760 2.347 1.00 99.99 C ATOM 562 NZ LYS 37 43.917 23.603 2.277 1.00 99.99 N ATOM 566 C LYS 37 45.830 20.273 5.650 1.00 99.99 C ATOM 567 O LYS 37 44.909 19.771 5.018 1.00 99.99 O ATOM 568 N GLU 38 45.953 20.024 6.975 1.00 99.99 N ATOM 570 CA GLU 38 44.879 19.342 7.703 1.00 99.99 C ATOM 572 CB GLU 38 45.318 18.823 9.097 1.00 99.99 C ATOM 575 CG GLU 38 44.460 17.648 9.654 1.00 99.99 C ATOM 578 CD GLU 38 43.091 18.010 10.222 1.00 99.99 C ATOM 579 OE1 GLU 38 43.016 18.369 11.429 1.00 99.99 O ATOM 580 OE2 GLU 38 42.087 17.902 9.471 1.00 99.99 O ATOM 581 C GLU 38 43.682 20.280 7.815 1.00 99.99 C ATOM 582 O GLU 38 43.810 21.415 8.288 1.00 99.99 O ATOM 583 N GLU 39 42.537 19.869 7.247 1.00 99.99 N ATOM 585 CA GLU 39 41.438 20.751 6.899 1.00 99.99 C ATOM 587 CB GLU 39 41.283 20.716 5.366 1.00 99.99 C ATOM 590 CG GLU 39 40.574 21.934 4.723 1.00 99.99 C ATOM 593 CD GLU 39 41.371 23.201 4.905 1.00 99.99 C ATOM 594 OE1 GLU 39 42.573 23.254 4.547 1.00 99.99 O ATOM 595 OE2 GLU 39 40.832 24.171 5.487 1.00 99.99 O ATOM 596 C GLU 39 40.128 20.374 7.562 1.00 99.99 C ATOM 597 O GLU 39 39.226 21.195 7.729 1.00 99.99 O ATOM 598 N ILE 40 39.989 19.122 8.029 1.00 99.99 N ATOM 600 CA ILE 40 38.784 18.606 8.672 1.00 99.99 C ATOM 602 CB ILE 40 38.458 17.206 8.103 1.00 99.99 C ATOM 604 CG2 ILE 40 37.702 16.264 9.066 1.00 99.99 C ATOM 608 CG1 ILE 40 37.614 17.279 6.796 1.00 99.99 C ATOM 611 CD1 ILE 40 38.113 18.201 5.676 1.00 99.99 C ATOM 615 C ILE 40 39.063 18.774 10.174 1.00 99.99 C ATOM 616 O ILE 40 38.960 17.893 11.028 1.00 99.99 O ATOM 617 N ARG 41 39.450 20.017 10.518 1.00 99.99 N ATOM 619 CA ARG 41 40.388 20.339 11.576 1.00 99.99 C ATOM 621 CB ARG 41 40.606 21.870 11.683 1.00 99.99 C ATOM 624 CG ARG 41 41.331 22.407 10.437 1.00 99.99 C ATOM 627 CD ARG 41 41.843 23.845 10.546 1.00 99.99 C ATOM 630 NE ARG 41 42.835 23.984 9.434 1.00 99.99 N ATOM 632 CZ ARG 41 42.519 24.337 8.187 1.00 99.99 C ATOM 633 NH1 ARG 41 41.432 25.009 7.870 1.00 99.99 H ATOM 636 NH2 ARG 41 43.282 23.878 7.201 1.00 99.99 H ATOM 639 C ARG 41 40.169 19.754 12.958 1.00 99.99 C ATOM 640 O ARG 41 39.234 20.116 13.666 1.00 99.99 O ATOM 641 N LYS 42 41.083 18.848 13.369 1.00 99.99 N ATOM 643 CA LYS 42 41.282 18.342 14.723 1.00 99.99 C ATOM 645 CB LYS 42 42.280 19.275 15.447 1.00 99.99 C ATOM 648 CG LYS 42 42.893 18.713 16.738 1.00 99.99 C ATOM 651 CD LYS 42 43.965 19.672 17.287 1.00 99.99 C ATOM 654 CE LYS 42 44.367 19.440 18.748 1.00 99.99 C ATOM 657 NZ LYS 42 43.253 19.790 19.628 1.00 99.99 N ATOM 661 C LYS 42 40.018 18.008 15.535 1.00 99.99 C ATOM 662 O LYS 42 39.471 16.911 15.405 1.00 99.99 O ATOM 663 N GLU 43 39.488 18.947 16.343 1.00 99.99 N ATOM 665 CA GLU 43 38.238 18.833 17.085 1.00 99.99 C ATOM 667 CB GLU 43 38.063 20.059 18.021 1.00 99.99 C ATOM 670 CG GLU 43 38.820 19.945 19.369 1.00 99.99 C ATOM 673 CD GLU 43 40.315 19.806 19.224 1.00 99.99 C ATOM 674 OE1 GLU 43 40.988 20.732 18.692 1.00 99.99 O ATOM 675 OE2 GLU 43 40.884 18.770 19.666 1.00 99.99 O ATOM 676 C GLU 43 36.969 18.689 16.236 1.00 99.99 C ATOM 677 O GLU 43 35.913 18.309 16.739 1.00 99.99 O ATOM 678 N TRP 44 37.004 18.972 14.919 1.00 99.99 N ATOM 680 CA TRP 44 35.855 18.804 14.043 1.00 99.99 C ATOM 682 CB TRP 44 36.061 19.513 12.682 1.00 99.99 C ATOM 685 CG TRP 44 36.202 21.038 12.632 1.00 99.99 C ATOM 686 CD1 TRP 44 36.628 21.719 11.524 1.00 99.99 C ATOM 688 NE1 TRP 44 36.613 23.076 11.748 1.00 99.99 N ATOM 690 CE2 TRP 44 36.165 23.305 13.025 1.00 99.99 C ATOM 691 CD2 TRP 44 35.888 22.053 13.623 1.00 99.99 C ATOM 692 CE3 TRP 44 35.413 21.989 14.938 1.00 99.99 C ATOM 694 CZ3 TRP 44 35.233 23.191 15.641 1.00 99.99 C ATOM 696 CZ2 TRP 44 35.969 24.493 13.718 1.00 99.99 C ATOM 698 CH2 TRP 44 35.503 24.427 15.038 1.00 99.99 H ATOM 700 C TRP 44 35.466 17.341 13.808 1.00 99.99 C ATOM 701 O TRP 44 35.915 16.662 12.879 1.00 99.99 O ATOM 702 N MET 45 34.593 16.811 14.676 1.00 99.99 N ATOM 704 CA MET 45 33.986 15.504 14.557 1.00 99.99 C ATOM 706 CB MET 45 33.629 14.927 15.950 1.00 99.99 C ATOM 709 CG MET 45 34.817 14.898 16.935 1.00 99.99 C ATOM 712 SD MET 45 36.260 13.969 16.340 1.00 99.99 S ATOM 713 CE MET 45 37.387 14.640 17.592 1.00 99.99 C ATOM 717 C MET 45 32.749 15.580 13.678 1.00 99.99 C ATOM 718 O MET 45 31.635 15.788 14.157 1.00 99.99 O ATOM 719 N PHE 46 32.942 15.464 12.347 1.00 99.99 N ATOM 721 CA PHE 46 31.900 15.442 11.319 1.00 99.99 C ATOM 723 CB PHE 46 30.852 14.313 11.509 1.00 99.99 C ATOM 726 CG PHE 46 31.565 13.013 11.767 1.00 99.99 C ATOM 727 CD1 PHE 46 32.416 12.452 10.798 1.00 99.99 C ATOM 729 CE1 PHE 46 33.146 11.291 11.078 1.00 99.99 C ATOM 731 CZ PHE 46 33.010 10.669 12.325 1.00 99.99 C ATOM 733 CD2 PHE 46 31.439 12.377 13.013 1.00 99.99 C ATOM 735 CE2 PHE 46 32.155 11.209 13.292 1.00 99.99 C ATOM 737 C PHE 46 31.257 16.798 11.057 1.00 99.99 C ATOM 738 O PHE 46 31.092 17.217 9.917 1.00 99.99 O ATOM 739 N LYS 47 30.941 17.574 12.110 1.00 99.99 N ATOM 741 CA LYS 47 30.685 18.998 11.999 1.00 99.99 C ATOM 743 CB LYS 47 30.112 19.565 13.335 1.00 99.99 C ATOM 746 CG LYS 47 29.478 20.982 13.300 1.00 99.99 C ATOM 749 CD LYS 47 30.420 22.185 13.052 1.00 99.99 C ATOM 752 CE LYS 47 31.507 22.413 14.119 1.00 99.99 C ATOM 755 NZ LYS 47 32.589 23.249 13.572 1.00 99.99 N ATOM 759 C LYS 47 31.974 19.720 11.614 1.00 99.99 C ATOM 760 O LYS 47 32.800 20.051 12.465 1.00 99.99 O ATOM 761 N LEU 48 32.162 19.982 10.306 1.00 99.99 N ATOM 763 CA LEU 48 33.302 20.696 9.759 1.00 99.99 C ATOM 765 CB LEU 48 33.456 20.371 8.255 1.00 99.99 C ATOM 768 CG LEU 48 33.515 18.854 7.959 1.00 99.99 C ATOM 770 CD1 LEU 48 33.818 18.599 6.478 1.00 99.99 C ATOM 774 CD2 LEU 48 34.535 18.115 8.837 1.00 99.99 C ATOM 778 C LEU 48 33.176 22.179 10.068 1.00 99.99 C ATOM 779 O LEU 48 33.436 22.568 11.200 1.00 99.99 O ATOM 780 N VAL 49 32.723 23.033 9.138 1.00 99.99 N ATOM 782 CA VAL 49 32.039 24.301 9.379 1.00 99.99 C ATOM 784 CB VAL 49 30.532 24.141 9.578 1.00 99.99 C ATOM 786 CG1 VAL 49 29.841 25.508 9.395 1.00 99.99 C ATOM 790 CG2 VAL 49 29.969 23.125 8.563 1.00 99.99 C ATOM 794 C VAL 49 32.624 25.208 10.460 1.00 99.99 C ATOM 795 O VAL 49 32.236 25.187 11.637 1.00 99.99 O ATOM 796 N GLY 50 33.606 26.030 10.080 1.00 99.99 N ATOM 798 CA GLY 50 34.185 27.004 10.997 1.00 99.99 C ATOM 801 C GLY 50 35.197 27.839 10.292 1.00 99.99 C ATOM 802 O GLY 50 35.107 29.061 10.280 1.00 99.99 O ATOM 803 N LYS 51 36.171 27.174 9.656 1.00 99.99 N ATOM 805 CA LYS 51 36.947 27.771 8.590 1.00 99.99 C ATOM 807 CB LYS 51 37.892 28.943 8.988 1.00 99.99 C ATOM 810 CG LYS 51 38.151 29.887 7.797 1.00 99.99 C ATOM 813 CD LYS 51 39.309 30.869 8.046 1.00 99.99 C ATOM 816 CE LYS 51 39.366 32.063 7.083 1.00 99.99 C ATOM 819 NZ LYS 51 39.375 31.617 5.686 1.00 99.99 N ATOM 823 C LYS 51 37.748 26.700 7.869 1.00 99.99 C ATOM 824 O LYS 51 38.958 26.552 8.050 1.00 99.99 O ATOM 825 N GLU 52 37.085 25.923 7.005 1.00 99.99 N ATOM 827 CA GLU 52 37.727 25.188 5.938 1.00 99.99 C ATOM 829 CB GLU 52 36.821 24.019 5.455 1.00 99.99 C ATOM 832 CG GLU 52 35.313 24.345 5.226 1.00 99.99 C ATOM 835 CD GLU 52 34.400 24.235 6.447 1.00 99.99 C ATOM 836 OE1 GLU 52 34.445 25.135 7.332 1.00 99.99 O ATOM 837 OE2 GLU 52 33.595 23.259 6.487 1.00 99.99 O ATOM 838 C GLU 52 38.149 26.182 4.836 1.00 99.99 C ATOM 839 O GLU 52 37.380 27.037 4.402 1.00 99.99 O ATOM 840 N THR 53 39.439 26.195 4.445 1.00 99.99 N ATOM 842 CA THR 53 40.093 27.427 3.990 1.00 99.99 C ATOM 844 CB THR 53 40.748 28.142 5.189 1.00 99.99 C ATOM 846 OG1 THR 53 40.982 29.530 4.977 1.00 99.99 O ATOM 848 CG2 THR 53 42.086 27.523 5.625 1.00 99.99 C ATOM 852 C THR 53 41.161 27.250 2.922 1.00 99.99 C ATOM 853 O THR 53 41.712 26.172 2.704 1.00 99.99 O ATOM 854 N PHE 54 41.535 28.369 2.266 1.00 99.99 N ATOM 856 CA PHE 54 42.860 28.545 1.699 1.00 99.99 C ATOM 858 CB PHE 54 42.804 28.725 0.155 1.00 99.99 C ATOM 861 CG PHE 54 44.033 28.142 -0.506 1.00 99.99 C ATOM 862 CD1 PHE 54 45.111 28.943 -0.922 1.00 99.99 C ATOM 864 CE1 PHE 54 46.260 28.370 -1.484 1.00 99.99 C ATOM 866 CZ PHE 54 46.325 26.986 -1.672 1.00 99.99 C ATOM 868 CD2 PHE 54 44.116 26.755 -0.699 1.00 99.99 C ATOM 870 CE2 PHE 54 45.248 26.182 -1.288 1.00 99.99 C ATOM 872 C PHE 54 43.499 29.747 2.394 1.00 99.99 C ATOM 873 O PHE 54 43.200 30.050 3.549 1.00 99.99 O ATOM 874 N TYR 55 44.388 30.462 1.695 1.00 99.99 N ATOM 876 CA TYR 55 44.970 31.723 2.098 1.00 99.99 C ATOM 878 CB TYR 55 46.485 31.573 2.400 1.00 99.99 C ATOM 881 CG TYR 55 46.691 30.620 3.543 1.00 99.99 C ATOM 882 CD1 TYR 55 47.169 29.317 3.318 1.00 99.99 C ATOM 884 CE1 TYR 55 47.357 28.434 4.390 1.00 99.99 C ATOM 886 CZ TYR 55 47.069 28.846 5.694 1.00 99.99 C ATOM 887 OH TYR 55 47.274 27.959 6.766 1.00 99.99 H ATOM 889 CD2 TYR 55 46.401 31.022 4.858 1.00 99.99 C ATOM 891 CE2 TYR 55 46.591 30.139 5.932 1.00 99.99 C ATOM 893 C TYR 55 44.772 32.698 0.945 1.00 99.99 C ATOM 894 O TYR 55 44.188 32.352 -0.077 1.00 99.99 O ATOM 895 N VAL 56 45.277 33.946 1.065 1.00 99.99 N ATOM 897 CA VAL 56 45.092 35.029 0.096 1.00 99.99 C ATOM 899 CB VAL 56 45.816 36.296 0.553 1.00 99.99 C ATOM 901 CG1 VAL 56 45.484 37.477 -0.384 1.00 99.99 C ATOM 905 CG2 VAL 56 45.378 36.652 1.989 1.00 99.99 C ATOM 909 C VAL 56 45.502 34.683 -1.339 1.00 99.99 C ATOM 910 O VAL 56 44.752 34.884 -2.295 1.00 99.99 O ATOM 911 N GLY 57 46.708 34.113 -1.528 1.00 99.99 N ATOM 913 CA GLY 57 47.172 33.665 -2.839 1.00 99.99 C ATOM 916 C GLY 57 46.711 32.273 -3.180 1.00 99.99 C ATOM 917 O GLY 57 47.503 31.338 -3.243 1.00 99.99 O ATOM 918 N ALA 58 45.404 32.090 -3.418 1.00 99.99 N ATOM 920 CA ALA 58 44.855 30.814 -3.817 1.00 99.99 C ATOM 922 CB ALA 58 43.379 30.707 -3.394 1.00 99.99 C ATOM 926 C ALA 58 45.008 30.543 -5.308 1.00 99.99 C ATOM 927 O ALA 58 44.476 31.251 -6.162 1.00 99.99 O ATOM 928 N ALA 59 45.748 29.479 -5.670 1.00 99.99 N ATOM 930 CA ALA 59 45.924 29.082 -7.049 1.00 99.99 C ATOM 932 CB ALA 59 47.190 28.212 -7.186 1.00 99.99 C ATOM 936 C ALA 59 44.701 28.328 -7.560 1.00 99.99 C ATOM 937 O ALA 59 44.400 27.221 -7.124 1.00 99.99 O ATOM 938 N LYS 60 43.931 28.929 -8.487 1.00 99.99 N ATOM 940 CA LYS 60 42.649 28.397 -8.920 1.00 99.99 C ATOM 942 CB LYS 60 41.756 29.520 -9.529 1.00 99.99 C ATOM 945 CG LYS 60 40.847 30.254 -8.513 1.00 99.99 C ATOM 948 CD LYS 60 41.565 31.006 -7.379 1.00 99.99 C ATOM 951 CE LYS 60 40.644 31.658 -6.331 1.00 99.99 C ATOM 954 NZ LYS 60 39.821 30.641 -5.653 1.00 99.99 N ATOM 958 C LYS 60 42.753 27.177 -9.845 1.00 99.99 C ATOM 959 O LYS 60 42.713 27.275 -11.067 1.00 99.99 O ATOM 960 N THR 61 42.887 25.984 -9.239 1.00 99.99 N ATOM 962 CA THR 61 42.912 24.684 -9.898 1.00 99.99 C ATOM 964 CB THR 61 44.353 24.191 -10.118 1.00 99.99 C ATOM 966 OG1 THR 61 44.433 22.981 -10.863 1.00 99.99 O ATOM 968 CG2 THR 61 45.111 23.988 -8.795 1.00 99.99 C ATOM 972 C THR 61 42.051 23.717 -9.084 1.00 99.99 C ATOM 973 O THR 61 41.138 24.119 -8.362 1.00 99.99 O ATOM 974 N LYS 62 42.278 22.397 -9.158 1.00 99.99 N ATOM 976 CA LYS 62 41.594 21.441 -8.307 1.00 99.99 C ATOM 978 CB LYS 62 41.459 20.048 -8.961 1.00 99.99 C ATOM 981 CG LYS 62 40.541 20.055 -10.194 1.00 99.99 C ATOM 984 CD LYS 62 39.998 18.650 -10.520 1.00 99.99 C ATOM 987 CE LYS 62 38.474 18.571 -10.675 1.00 99.99 C ATOM 990 NZ LYS 62 37.801 18.969 -9.426 1.00 99.99 N ATOM 994 C LYS 62 42.223 21.310 -6.923 1.00 99.99 C ATOM 995 O LYS 62 43.439 21.294 -6.760 1.00 99.99 O ATOM 996 N ALA 63 41.369 21.199 -5.887 1.00 99.99 N ATOM 998 CA ALA 63 41.771 21.015 -4.508 1.00 99.99 C ATOM 1000 CB ALA 63 40.794 21.736 -3.553 1.00 99.99 C ATOM 1004 C ALA 63 41.776 19.530 -4.190 1.00 99.99 C ATOM 1005 O ALA 63 40.751 18.945 -3.833 1.00 99.99 O ATOM 1006 N THR 64 42.926 18.859 -4.361 1.00 99.99 N ATOM 1008 CA THR 64 43.024 17.415 -4.151 1.00 99.99 C ATOM 1010 CB THR 64 44.010 16.711 -5.091 1.00 99.99 C ATOM 1012 OG1 THR 64 43.292 15.943 -6.047 1.00 99.99 O ATOM 1014 CG2 THR 64 45.012 15.748 -4.429 1.00 99.99 C ATOM 1018 C THR 64 43.253 17.082 -2.696 1.00 99.99 C ATOM 1019 O THR 64 43.958 17.782 -1.962 1.00 99.99 O ATOM 1020 N ILE 65 42.583 16.015 -2.222 1.00 99.99 N ATOM 1022 CA ILE 65 42.477 15.726 -0.806 1.00 99.99 C ATOM 1024 CB ILE 65 41.088 16.017 -0.219 1.00 99.99 C ATOM 1026 CG2 ILE 65 40.646 17.406 -0.722 1.00 99.99 C ATOM 1030 CG1 ILE 65 39.992 14.978 -0.542 1.00 99.99 C ATOM 1033 CD1 ILE 65 38.676 15.283 0.191 1.00 99.99 C ATOM 1037 C ILE 65 42.924 14.315 -0.511 1.00 99.99 C ATOM 1038 O ILE 65 42.690 13.380 -1.267 1.00 99.99 O ATOM 1039 N ASN 66 43.622 14.091 0.610 1.00 99.99 N ATOM 1041 CA ASN 66 43.968 12.749 1.041 1.00 99.99 C ATOM 1043 CB ASN 66 45.493 12.575 1.239 1.00 99.99 C ATOM 1046 CG ASN 66 46.288 12.649 -0.065 1.00 99.99 C ATOM 1047 OD1 ASN 66 47.506 12.817 -0.034 1.00 99.99 O ATOM 1048 ND2 ASN 66 45.641 12.497 -1.240 1.00 99.99 N ATOM 1051 C ASN 66 43.219 12.442 2.320 1.00 99.99 C ATOM 1052 O ASN 66 43.402 13.095 3.344 1.00 99.99 O ATOM 1053 N ILE 67 42.325 11.443 2.250 1.00 99.99 N ATOM 1055 CA ILE 67 41.472 10.999 3.336 1.00 99.99 C ATOM 1057 CB ILE 67 40.019 10.818 2.865 1.00 99.99 C ATOM 1059 CG2 ILE 67 39.094 10.617 4.084 1.00 99.99 C ATOM 1063 CG1 ILE 67 39.503 11.979 1.978 1.00 99.99 C ATOM 1066 CD1 ILE 67 38.208 11.616 1.237 1.00 99.99 C ATOM 1070 C ILE 67 41.984 9.637 3.783 1.00 99.99 C ATOM 1071 O ILE 67 42.265 8.778 2.947 1.00 99.99 O ATOM 1072 N ASP 68 42.111 9.373 5.091 1.00 99.99 N ATOM 1074 CA ASP 68 42.415 8.055 5.611 1.00 99.99 C ATOM 1076 CB ASP 68 43.063 8.227 7.015 1.00 99.99 C ATOM 1079 CG ASP 68 42.102 8.959 7.931 1.00 99.99 C ATOM 1080 OD1 ASP 68 41.968 10.192 7.754 1.00 99.99 O ATOM 1081 OD2 ASP 68 41.411 8.289 8.735 1.00 99.99 O ATOM 1082 C ASP 68 41.167 7.162 5.703 1.00 99.99 C ATOM 1083 O ASP 68 40.066 7.501 5.257 1.00 99.99 O ATOM 1084 N ALA 69 41.305 6.002 6.357 1.00 99.99 N ATOM 1086 CA ALA 69 40.179 5.286 6.884 1.00 99.99 C ATOM 1088 CB ALA 69 39.493 4.411 5.816 1.00 99.99 C ATOM 1092 C ALA 69 40.629 4.415 8.028 1.00 99.99 C ATOM 1093 O ALA 69 41.769 3.960 8.090 1.00 99.99 O ATOM 1094 N ILE 70 39.701 4.093 8.944 1.00 99.99 N ATOM 1096 CA ILE 70 39.932 3.179 10.053 1.00 99.99 C ATOM 1098 CB ILE 70 38.806 3.275 11.079 1.00 99.99 C ATOM 1100 CG2 ILE 70 38.855 4.692 11.698 1.00 99.99 C ATOM 1104 CG1 ILE 70 37.417 2.950 10.475 1.00 99.99 C ATOM 1107 CD1 ILE 70 36.297 2.929 11.522 1.00 99.99 C ATOM 1111 C ILE 70 40.137 1.730 9.610 1.00 99.99 C ATOM 1112 O ILE 70 40.561 0.872 10.375 1.00 99.99 O ATOM 1113 N SER 71 39.872 1.434 8.324 1.00 99.99 N ATOM 1115 CA SER 71 40.202 0.183 7.663 1.00 99.99 C ATOM 1117 CB SER 71 39.219 -0.090 6.491 1.00 99.99 C ATOM 1120 OG SER 71 39.131 1.040 5.613 1.00 99.99 O ATOM 1122 C SER 71 41.604 0.173 7.070 1.00 99.99 C ATOM 1123 O SER 71 42.060 -0.854 6.577 1.00 99.99 O ATOM 1124 N GLY 72 42.318 1.319 7.069 1.00 99.99 N ATOM 1126 CA GLY 72 43.663 1.434 6.507 1.00 99.99 C ATOM 1129 C GLY 72 43.695 1.909 5.078 1.00 99.99 C ATOM 1130 O GLY 72 44.751 2.228 4.542 1.00 99.99 O ATOM 1131 N PHE 73 42.536 1.962 4.404 1.00 99.99 N ATOM 1133 CA PHE 73 42.451 2.331 3.004 1.00 99.99 C ATOM 1135 CB PHE 73 41.207 1.644 2.373 1.00 99.99 C ATOM 1138 CG PHE 73 41.352 1.474 0.883 1.00 99.99 C ATOM 1139 CD1 PHE 73 41.745 0.236 0.346 1.00 99.99 C ATOM 1141 CE1 PHE 73 41.890 0.073 -1.039 1.00 99.99 C ATOM 1143 CZ PHE 73 41.648 1.152 -1.899 1.00 99.99 C ATOM 1145 CD2 PHE 73 41.107 2.544 0.009 1.00 99.99 C ATOM 1147 CE2 PHE 73 41.259 2.389 -1.374 1.00 99.99 C ATOM 1149 C PHE 73 42.391 3.850 2.820 1.00 99.99 C ATOM 1150 O PHE 73 41.591 4.538 3.445 1.00 99.99 O ATOM 1151 N ALA 74 43.245 4.418 1.948 1.00 99.99 N ATOM 1153 CA ALA 74 43.265 5.844 1.690 1.00 99.99 C ATOM 1155 CB ALA 74 44.712 6.316 1.449 1.00 99.99 C ATOM 1159 C ALA 74 42.382 6.234 0.506 1.00 99.99 C ATOM 1160 O ALA 74 42.296 5.529 -0.497 1.00 99.99 O ATOM 1161 N TYR 75 41.695 7.386 0.600 1.00 99.99 N ATOM 1163 CA TYR 75 40.768 7.856 -0.415 1.00 99.99 C ATOM 1165 CB TYR 75 39.297 7.839 0.092 1.00 99.99 C ATOM 1168 CG TYR 75 38.859 6.439 0.419 1.00 99.99 C ATOM 1169 CD1 TYR 75 38.329 5.608 -0.583 1.00 99.99 C ATOM 1171 CE1 TYR 75 37.934 4.294 -0.285 1.00 99.99 C ATOM 1173 CZ TYR 75 38.068 3.806 1.020 1.00 99.99 C ATOM 1174 OH TYR 75 37.698 2.485 1.332 1.00 99.99 H ATOM 1176 CD2 TYR 75 38.987 5.935 1.725 1.00 99.99 C ATOM 1178 CE2 TYR 75 38.597 4.622 2.019 1.00 99.99 C ATOM 1180 C TYR 75 41.118 9.266 -0.876 1.00 99.99 C ATOM 1181 O TYR 75 41.839 10.013 -0.214 1.00 99.99 O ATOM 1182 N GLU 76 40.588 9.652 -2.050 1.00 99.99 N ATOM 1184 CA GLU 76 40.764 10.949 -2.677 1.00 99.99 C ATOM 1186 CB GLU 76 41.697 10.788 -3.912 1.00 99.99 C ATOM 1189 CG GLU 76 42.544 12.023 -4.327 1.00 99.99 C ATOM 1192 CD GLU 76 41.722 13.165 -4.880 1.00 99.99 C ATOM 1193 OE1 GLU 76 40.870 12.910 -5.765 1.00 99.99 O ATOM 1194 OE2 GLU 76 41.890 14.326 -4.415 1.00 99.99 O ATOM 1195 C GLU 76 39.360 11.430 -3.046 1.00 99.99 C ATOM 1196 O GLU 76 38.427 10.624 -3.051 1.00 99.99 O ATOM 1197 N TYR 77 39.153 12.734 -3.321 1.00 99.99 N ATOM 1199 CA TYR 77 37.853 13.259 -3.721 1.00 99.99 C ATOM 1201 CB TYR 77 36.889 13.333 -2.495 1.00 99.99 C ATOM 1204 CG TYR 77 35.440 13.192 -2.878 1.00 99.99 C ATOM 1205 CD1 TYR 77 34.929 11.929 -3.217 1.00 99.99 C ATOM 1207 CE1 TYR 77 33.567 11.767 -3.511 1.00 99.99 C ATOM 1209 CZ TYR 77 32.705 12.866 -3.460 1.00 99.99 C ATOM 1210 OH TYR 77 31.334 12.686 -3.734 1.00 99.99 H ATOM 1212 CD2 TYR 77 34.570 14.295 -2.851 1.00 99.99 C ATOM 1214 CE2 TYR 77 33.205 14.131 -3.137 1.00 99.99 C ATOM 1216 C TYR 77 38.015 14.640 -4.371 1.00 99.99 C ATOM 1217 O TYR 77 37.422 15.626 -3.934 1.00 99.99 O ATOM 1218 N THR 78 38.858 14.740 -5.423 1.00 99.99 N ATOM 1220 CA THR 78 39.377 15.975 -6.028 1.00 99.99 C ATOM 1222 CB THR 78 40.277 15.711 -7.240 1.00 99.99 C ATOM 1224 OG1 THR 78 41.058 16.844 -7.602 1.00 99.99 O ATOM 1226 CG2 THR 78 39.520 15.206 -8.477 1.00 99.99 C ATOM 1230 C THR 78 38.409 17.137 -6.272 1.00 99.99 C ATOM 1231 O THR 78 37.628 17.218 -7.231 1.00 99.99 O ATOM 1232 N LEU 79 38.450 18.121 -5.356 1.00 99.99 N ATOM 1234 CA LEU 79 37.512 19.216 -5.282 1.00 99.99 C ATOM 1236 CB LEU 79 37.159 19.447 -3.793 1.00 99.99 C ATOM 1239 CG LEU 79 35.867 20.225 -3.468 1.00 99.99 C ATOM 1241 CD1 LEU 79 34.689 19.888 -4.393 1.00 99.99 C ATOM 1245 CD2 LEU 79 35.472 19.917 -2.021 1.00 99.99 C ATOM 1249 C LEU 79 38.079 20.421 -6.023 1.00 99.99 C ATOM 1250 O LEU 79 38.842 20.247 -6.974 1.00 99.99 O ATOM 1251 N GLU 80 37.701 21.679 -5.703 1.00 99.99 N ATOM 1253 CA GLU 80 38.095 22.825 -6.519 1.00 99.99 C ATOM 1255 CB GLU 80 37.065 23.141 -7.644 1.00 99.99 C ATOM 1258 CG GLU 80 36.896 21.908 -8.556 1.00 99.99 C ATOM 1261 CD GLU 80 36.183 22.035 -9.878 1.00 99.99 C ATOM 1262 OE1 GLU 80 35.702 23.124 -10.262 1.00 99.99 O ATOM 1263 OE2 GLU 80 36.149 20.965 -10.546 1.00 99.99 O ATOM 1264 C GLU 80 38.402 24.087 -5.739 1.00 99.99 C ATOM 1265 O GLU 80 37.652 24.520 -4.867 1.00 99.99 O ATOM 1266 N ILE 81 39.525 24.732 -6.104 1.00 99.99 N ATOM 1268 CA ILE 81 39.897 26.075 -5.710 1.00 99.99 C ATOM 1270 CB ILE 81 41.417 26.215 -5.584 1.00 99.99 C ATOM 1272 CG2 ILE 81 41.779 27.659 -5.168 1.00 99.99 C ATOM 1276 CG1 ILE 81 41.985 25.132 -4.637 1.00 99.99 C ATOM 1279 CD1 ILE 81 43.489 25.242 -4.362 1.00 99.99 C ATOM 1283 C ILE 81 39.411 26.954 -6.845 1.00 99.99 C ATOM 1284 O ILE 81 39.955 26.917 -7.945 1.00 99.99 O ATOM 1285 N ASN 82 38.328 27.739 -6.689 1.00 99.99 N ATOM 1287 CA ASN 82 37.672 28.216 -7.898 1.00 99.99 C ATOM 1289 CB ASN 82 36.826 27.049 -8.496 1.00 99.99 C ATOM 1292 CG ASN 82 36.976 27.029 -10.008 1.00 99.99 C ATOM 1293 OD1 ASN 82 36.069 27.410 -10.740 1.00 99.99 O ATOM 1294 ND2 ASN 82 38.169 26.617 -10.491 1.00 99.99 N ATOM 1297 C ASN 82 36.894 29.509 -7.705 1.00 99.99 C ATOM 1298 O ASN 82 37.398 30.460 -7.107 1.00 99.99 O ATOM 1299 N GLY 83 35.674 29.565 -8.263 1.00 99.99 N ATOM 1301 CA GLY 83 34.656 30.571 -8.009 1.00 99.99 C ATOM 1304 C GLY 83 33.345 29.932 -8.362 1.00 99.99 C ATOM 1305 O GLY 83 32.725 30.251 -9.369 1.00 99.99 O ATOM 1306 N LYS 84 32.933 28.938 -7.565 1.00 99.99 N ATOM 1308 CA LYS 84 31.796 28.087 -7.849 1.00 99.99 C ATOM 1310 CB LYS 84 32.207 26.750 -8.536 1.00 99.99 C ATOM 1313 CG LYS 84 32.705 26.833 -9.987 1.00 99.99 C ATOM 1316 CD LYS 84 33.180 25.444 -10.453 1.00 99.99 C ATOM 1319 CE LYS 84 33.705 25.393 -11.890 1.00 99.99 C ATOM 1322 NZ LYS 84 34.257 24.053 -12.165 1.00 99.99 N ATOM 1326 C LYS 84 31.229 27.650 -6.520 1.00 99.99 C ATOM 1327 O LYS 84 31.970 27.547 -5.549 1.00 99.99 O ATOM 1328 N SER 85 29.935 27.295 -6.456 1.00 99.99 N ATOM 1330 CA SER 85 29.443 26.497 -5.339 1.00 99.99 C ATOM 1332 CB SER 85 27.939 26.664 -5.030 1.00 99.99 C ATOM 1335 OG SER 85 27.720 27.956 -4.467 1.00 99.99 O ATOM 1337 C SER 85 29.769 25.030 -5.540 1.00 99.99 C ATOM 1338 O SER 85 29.787 24.494 -6.651 1.00 99.99 O ATOM 1339 N LEU 86 30.099 24.339 -4.445 1.00 99.99 N ATOM 1341 CA LEU 86 30.794 23.073 -4.450 1.00 99.99 C ATOM 1343 CB LEU 86 31.908 23.044 -3.368 1.00 99.99 C ATOM 1346 CG LEU 86 33.296 23.525 -3.863 1.00 99.99 C ATOM 1348 CD1 LEU 86 33.278 24.873 -4.590 1.00 99.99 C ATOM 1352 CD2 LEU 86 34.291 23.607 -2.698 1.00 99.99 C ATOM 1356 C LEU 86 29.798 21.944 -4.298 1.00 99.99 C ATOM 1357 O LEU 86 29.660 21.315 -3.249 1.00 99.99 O ATOM 1358 N LYS 87 29.067 21.659 -5.396 1.00 99.99 N ATOM 1360 CA LYS 87 28.235 20.480 -5.601 1.00 99.99 C ATOM 1362 CB LYS 87 29.044 19.170 -5.362 1.00 99.99 C ATOM 1365 CG LYS 87 28.378 17.891 -5.901 1.00 99.99 C ATOM 1368 CD LYS 87 29.218 16.626 -5.645 1.00 99.99 C ATOM 1371 CE LYS 87 28.703 15.701 -4.531 1.00 99.99 C ATOM 1374 NZ LYS 87 28.634 16.396 -3.239 1.00 99.99 N ATOM 1378 C LYS 87 26.916 20.433 -4.833 1.00 99.99 C ATOM 1379 O LYS 87 25.899 20.027 -5.385 1.00 99.99 O ATOM 1380 N LYS 88 26.946 20.800 -3.536 1.00 99.99 N ATOM 1382 CA LYS 88 26.021 20.416 -2.484 1.00 99.99 C ATOM 1384 CB LYS 88 24.502 20.581 -2.782 1.00 99.99 C ATOM 1387 CG LYS 88 23.513 20.261 -1.633 1.00 99.99 C ATOM 1390 CD LYS 88 23.492 21.275 -0.468 1.00 99.99 C ATOM 1393 CE LYS 88 24.153 20.832 0.849 1.00 99.99 C ATOM 1396 NZ LYS 88 23.422 19.737 1.511 1.00 99.99 N ATOM 1400 C LYS 88 26.380 19.019 -1.995 1.00 99.99 C ATOM 1401 O LYS 88 26.507 18.058 -2.753 1.00 99.99 O ATOM 1402 N TYR 89 26.623 18.896 -0.685 1.00 99.99 N ATOM 1404 CA TYR 89 26.881 17.642 -0.007 1.00 99.99 C ATOM 1406 CB TYR 89 28.093 17.821 0.946 1.00 99.99 C ATOM 1409 CG TYR 89 29.318 17.975 0.100 1.00 99.99 C ATOM 1410 CD1 TYR 89 29.787 19.222 -0.357 1.00 99.99 C ATOM 1412 CE1 TYR 89 30.910 19.289 -1.195 1.00 99.99 C ATOM 1414 CZ TYR 89 31.559 18.114 -1.584 1.00 99.99 C ATOM 1415 OH TYR 89 32.694 18.146 -2.401 1.00 99.99 H ATOM 1417 CD2 TYR 89 30.002 16.814 -0.273 1.00 99.99 C ATOM 1419 CE2 TYR 89 31.102 16.880 -1.130 1.00 99.99 C ATOM 1421 C TYR 89 25.631 17.209 0.739 1.00 99.99 C ATOM 1422 O TYR 89 24.508 17.534 0.348 1.00 99.99 O ATOM 1423 C MET 90 24.597 17.330 3.816 1.00 99.99 C ATOM 1424 OT1 MET 90 24.410 17.032 5.020 0.00 99.99 O ATOM 1425 OT2 MET 90 24.716 18.538 3.463 0.00 99.99 O ATOM 1426 N MET 90 25.786 16.487 1.853 1.00 99.99 N ATOM 1428 CA MET 90 24.705 16.197 2.763 1.00 99.99 C ATOM 1430 CB MET 90 24.949 14.831 3.448 1.00 99.99 C ATOM 1433 CG MET 90 25.048 13.652 2.456 1.00 99.99 C ATOM 1436 SD MET 90 25.403 12.043 3.231 1.00 99.99 S ATOM 1437 CE MET 90 23.794 11.835 4.048 1.00 99.99 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 715 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 77.94 41.0 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 71.13 43.2 118 100.0 118 ARMSMC SURFACE . . . . . . . . 83.82 40.7 108 100.0 108 ARMSMC BURIED . . . . . . . . 67.89 41.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.07 44.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 85.40 40.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 85.18 44.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 91.67 29.5 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 69.06 64.5 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.78 47.3 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 73.27 50.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 73.00 53.8 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 74.69 42.4 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 69.83 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.11 33.3 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 71.11 33.3 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 62.66 35.3 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 67.80 33.3 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 80.22 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 128.66 7.7 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 128.66 7.7 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 137.65 0.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 132.47 9.1 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 105.30 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.23 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.23 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.1247 CRMSCA SECONDARY STRUCTURE . . 10.96 59 100.0 59 CRMSCA SURFACE . . . . . . . . 12.11 55 100.0 55 CRMSCA BURIED . . . . . . . . 9.66 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.25 441 99.8 442 CRMSMC SECONDARY STRUCTURE . . 10.97 293 100.0 293 CRMSMC SURFACE . . . . . . . . 12.11 268 99.6 269 CRMSMC BURIED . . . . . . . . 9.77 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.06 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 12.00 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 11.76 252 100.0 252 CRMSSC SURFACE . . . . . . . . 13.49 204 100.0 204 CRMSSC BURIED . . . . . . . . 9.82 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.61 715 99.9 716 CRMSALL SECONDARY STRUCTURE . . 11.33 488 100.0 488 CRMSALL SURFACE . . . . . . . . 12.69 423 99.8 424 CRMSALL BURIED . . . . . . . . 9.82 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 90.184 0.826 0.843 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 90.235 0.826 0.842 59 100.0 59 ERRCA SURFACE . . . . . . . . 89.581 0.817 0.836 55 100.0 55 ERRCA BURIED . . . . . . . . 91.131 0.839 0.853 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 90.157 0.825 0.842 441 99.8 442 ERRMC SECONDARY STRUCTURE . . 90.248 0.826 0.843 293 100.0 293 ERRMC SURFACE . . . . . . . . 89.561 0.817 0.836 268 99.6 269 ERRMC BURIED . . . . . . . . 91.079 0.839 0.853 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 89.310 0.811 0.831 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 89.339 0.812 0.831 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 89.554 0.815 0.834 252 100.0 252 ERRSC SURFACE . . . . . . . . 87.946 0.790 0.813 204 100.0 204 ERRSC BURIED . . . . . . . . 91.141 0.840 0.854 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 89.782 0.819 0.837 715 99.9 716 ERRALL SECONDARY STRUCTURE . . 89.924 0.821 0.838 488 100.0 488 ERRALL SURFACE . . . . . . . . 88.887 0.806 0.826 423 99.8 424 ERRALL BURIED . . . . . . . . 91.078 0.839 0.853 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 6 18 54 90 90 DISTCA CA (P) 0.00 1.11 6.67 20.00 60.00 90 DISTCA CA (RMS) 0.00 1.41 2.51 3.69 6.48 DISTCA ALL (N) 2 6 26 130 412 715 716 DISTALL ALL (P) 0.28 0.84 3.63 18.16 57.54 716 DISTALL ALL (RMS) 0.70 1.28 2.31 3.91 6.63 DISTALL END of the results output