####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS345_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS345_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 1 - 43 4.54 11.59 LCS_AVERAGE: 35.72 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 2 - 24 1.95 13.48 LCS_AVERAGE: 14.12 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 6 - 18 0.97 13.56 LCS_AVERAGE: 8.01 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 4 43 3 3 6 11 13 15 25 30 36 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT T 2 T 2 3 23 43 4 4 6 11 17 22 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT D 3 D 3 4 23 43 4 4 7 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT L 4 L 4 4 23 43 4 4 9 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 5 V 5 11 23 43 4 7 10 15 18 22 27 31 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT A 6 A 6 13 23 43 4 10 15 17 20 24 28 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 7 V 7 13 23 43 6 10 15 18 20 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT W 8 W 8 13 23 43 4 9 15 18 20 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT D 9 D 9 13 23 43 3 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 10 V 10 13 23 43 3 8 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT A 11 A 11 13 23 43 3 8 14 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT L 12 L 12 13 23 43 3 8 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT S 13 S 13 13 23 43 3 8 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT D 14 D 14 13 23 43 3 9 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT G 15 G 15 13 23 43 3 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 16 V 16 13 23 43 3 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT H 17 H 17 13 23 43 3 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 18 K 18 13 23 43 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT I 19 I 19 11 23 43 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 20 E 20 11 23 43 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT F 21 F 21 11 23 43 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 22 E 22 11 23 43 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT H 23 H 23 11 23 43 5 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT G 24 G 24 11 23 43 3 6 13 17 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT T 25 T 25 7 22 43 3 6 9 15 20 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT T 26 T 26 7 20 43 3 6 9 14 20 24 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT S 27 S 27 7 14 43 3 6 7 14 20 24 29 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT G 28 G 28 8 14 43 6 7 8 14 20 24 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 29 K 29 8 14 43 6 7 8 8 11 19 23 29 32 39 43 46 51 56 57 59 62 63 65 66 LCS_GDT R 30 R 30 8 14 43 6 7 9 14 20 24 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 31 V 31 8 14 43 6 7 8 14 20 24 27 35 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 32 V 32 8 14 43 6 7 9 13 19 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT Y 33 Y 33 8 14 43 6 7 8 14 20 24 28 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT V 34 V 34 8 12 43 4 7 10 15 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT D 35 D 35 8 12 43 3 7 8 14 20 24 31 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT G 36 G 36 6 9 43 4 5 6 8 10 12 17 26 32 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 37 K 37 6 8 43 4 5 6 8 10 16 21 26 33 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 38 E 38 6 8 43 4 5 7 8 10 12 14 26 30 38 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 39 E 39 6 8 43 4 5 6 11 13 17 22 24 26 30 42 49 53 56 57 59 62 63 65 66 LCS_GDT I 40 I 40 5 8 43 3 5 5 8 8 17 22 26 26 37 42 49 53 56 57 59 62 63 65 66 LCS_GDT R 41 R 41 5 8 43 3 4 5 5 7 9 15 21 30 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 42 K 42 5 8 43 3 4 5 6 7 10 17 21 29 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 43 E 43 5 8 43 3 4 5 7 8 9 14 17 20 26 30 37 44 50 53 58 62 63 65 66 LCS_GDT W 44 W 44 4 6 42 3 4 5 6 6 7 8 10 13 16 20 25 28 34 39 47 50 57 61 66 LCS_GDT M 45 M 45 4 6 13 3 4 5 6 6 7 8 10 14 17 21 23 35 39 44 50 55 59 63 66 LCS_GDT F 46 F 46 5 6 13 3 4 5 6 6 6 8 8 10 10 13 13 20 23 42 44 48 54 59 64 LCS_GDT K 47 K 47 5 6 13 3 4 5 6 6 7 10 14 18 21 34 39 46 52 56 58 61 63 65 66 LCS_GDT L 48 L 48 5 6 13 3 4 5 7 7 9 13 19 27 36 44 47 53 56 57 59 62 63 65 66 LCS_GDT V 49 V 49 5 6 13 3 4 5 10 12 19 25 31 37 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT G 50 G 50 5 6 13 3 4 12 15 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 51 K 51 3 8 12 1 3 4 7 8 8 10 15 16 32 39 43 45 54 57 59 62 63 65 66 LCS_GDT E 52 E 52 4 8 12 3 4 5 7 8 11 14 25 30 40 43 46 50 56 57 59 62 63 65 66 LCS_GDT T 53 T 53 4 8 12 3 4 5 7 8 8 10 11 13 34 43 45 47 50 55 59 61 63 65 66 LCS_GDT F 54 F 54 4 8 12 3 4 5 7 8 8 23 24 26 30 38 41 46 50 52 54 58 62 64 66 LCS_GDT Y 55 Y 55 4 8 13 3 4 5 7 8 8 10 11 16 24 26 30 33 36 40 44 49 51 54 58 LCS_GDT V 56 V 56 4 8 15 3 4 5 7 8 8 10 11 13 19 23 24 32 32 40 44 44 48 52 56 LCS_GDT G 57 G 57 4 8 15 1 4 4 6 7 8 10 11 13 15 16 18 21 28 31 33 38 41 42 44 LCS_GDT A 58 A 58 3 8 17 0 3 5 7 8 8 10 10 14 15 16 18 21 22 29 31 34 41 42 45 LCS_GDT A 59 A 59 3 4 27 3 3 3 3 5 6 9 10 14 15 16 20 23 26 29 31 38 43 52 55 LCS_GDT K 60 K 60 3 11 27 3 3 4 7 11 12 13 17 19 21 23 24 25 28 31 31 38 46 52 56 LCS_GDT T 61 T 61 10 11 27 3 9 10 10 11 12 13 17 19 21 23 24 26 31 42 44 50 53 59 61 LCS_GDT K 62 K 62 10 11 27 4 9 10 10 11 12 21 22 27 31 37 41 42 46 52 54 60 62 65 66 LCS_GDT A 63 A 63 10 11 27 4 10 13 14 17 22 26 29 34 39 42 45 48 51 57 59 62 63 65 66 LCS_GDT T 64 T 64 10 11 27 4 9 10 13 20 24 28 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT I 65 I 65 10 11 27 4 9 10 10 13 21 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT N 66 N 66 10 11 27 4 9 10 10 11 11 17 26 32 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT I 67 I 67 10 11 27 4 9 10 10 11 11 13 17 22 28 40 43 45 51 56 58 60 62 64 66 LCS_GDT D 68 D 68 10 11 27 3 9 10 10 11 11 12 17 19 23 29 37 41 44 49 54 56 59 61 64 LCS_GDT A 69 A 69 10 11 27 3 9 10 10 11 11 13 17 19 21 23 24 31 39 44 49 52 55 59 63 LCS_GDT I 70 I 70 10 11 27 2 6 10 10 11 11 12 17 19 21 23 24 26 28 30 32 35 40 43 50 LCS_GDT S 71 S 71 3 8 27 3 3 5 7 8 9 12 17 19 21 23 24 26 28 30 32 34 38 40 45 LCS_GDT G 72 G 72 3 8 27 3 3 5 7 8 11 12 17 19 21 23 24 26 28 30 32 34 38 40 42 LCS_GDT F 73 F 73 4 8 27 3 3 4 6 6 9 10 12 16 21 23 24 26 28 30 32 34 38 40 45 LCS_GDT A 74 A 74 6 8 27 3 5 6 7 9 10 13 17 19 21 23 24 26 28 30 32 34 38 40 43 LCS_GDT Y 75 Y 75 6 8 27 3 5 6 8 9 10 12 17 19 21 23 24 26 28 30 32 34 38 41 45 LCS_GDT E 76 E 76 6 9 27 3 5 7 8 9 10 12 14 15 21 23 24 31 34 39 47 51 53 55 57 LCS_GDT Y 77 Y 77 6 9 27 4 5 7 8 9 10 13 17 19 21 23 28 36 41 47 51 53 59 61 63 LCS_GDT T 78 T 78 6 9 27 4 5 7 8 9 10 12 14 22 26 40 43 51 54 56 58 60 62 64 66 LCS_GDT L 79 L 79 6 9 27 4 5 7 8 9 10 18 26 33 39 44 49 53 56 57 59 62 63 65 66 LCS_GDT E 80 E 80 6 9 27 3 5 7 8 9 10 21 28 32 39 43 47 53 56 57 59 62 63 65 66 LCS_GDT I 81 I 81 6 9 27 3 5 7 8 13 21 23 26 32 36 40 43 48 52 56 59 62 63 65 66 LCS_GDT N 82 N 82 5 9 27 3 5 7 8 9 10 13 17 19 21 23 28 34 43 44 51 55 57 59 61 LCS_GDT G 83 G 83 4 9 27 3 4 4 6 9 10 12 15 24 29 35 39 41 43 45 50 55 57 59 62 LCS_GDT K 84 K 84 4 9 27 3 4 4 8 12 16 23 26 32 34 40 44 48 51 56 59 62 63 65 66 LCS_GDT S 85 S 85 4 7 27 3 3 4 8 13 16 23 26 32 36 42 44 48 51 56 59 62 63 65 66 LCS_GDT L 86 L 86 4 7 27 1 8 11 15 18 20 22 27 38 40 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 87 K 87 3 7 19 3 3 8 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT K 88 K 88 3 3 15 0 3 3 3 20 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT Y 89 Y 89 3 3 13 0 3 6 15 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 LCS_GDT M 90 M 90 3 3 13 0 3 3 4 7 9 14 18 28 39 44 49 53 56 57 59 62 63 65 66 LCS_AVERAGE LCS_A: 19.28 ( 8.01 14.12 35.72 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 15 18 21 26 32 36 39 41 44 49 53 56 57 59 62 63 65 66 GDT PERCENT_AT 6.67 11.11 16.67 20.00 23.33 28.89 35.56 40.00 43.33 45.56 48.89 54.44 58.89 62.22 63.33 65.56 68.89 70.00 72.22 73.33 GDT RMS_LOCAL 0.23 0.54 1.00 1.32 1.67 1.98 2.48 2.73 2.94 3.13 3.42 4.01 4.28 4.46 4.53 4.75 5.13 5.23 5.47 5.53 GDT RMS_ALL_AT 13.85 13.90 13.41 13.48 12.59 12.43 12.19 12.12 12.12 12.04 11.94 11.61 11.55 11.56 11.58 11.54 11.44 11.40 11.42 11.38 # Checking swapping # possible swapping detected: D 14 D 14 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: E 52 E 52 # possible swapping detected: F 54 F 54 # possible swapping detected: D 68 D 68 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 4.901 0 0.588 1.277 6.401 29.048 26.667 LGA T 2 T 2 3.604 0 0.195 0.978 6.260 46.667 45.714 LGA D 3 D 3 3.376 0 0.464 0.709 7.334 55.476 38.988 LGA L 4 L 4 3.136 0 0.120 0.192 6.221 61.429 44.821 LGA V 5 V 5 5.496 0 0.525 1.055 9.216 26.429 16.190 LGA A 6 A 6 4.088 0 0.060 0.170 4.203 48.810 46.476 LGA V 7 V 7 3.076 0 0.122 0.173 4.210 45.119 48.231 LGA W 8 W 8 2.770 0 0.400 1.141 10.137 53.690 26.701 LGA D 9 D 9 1.091 0 0.163 0.862 4.677 79.286 68.274 LGA V 10 V 10 1.781 0 0.399 1.493 4.038 77.143 65.714 LGA A 11 A 11 2.611 0 0.166 0.364 4.282 57.262 53.238 LGA L 12 L 12 3.289 0 0.097 1.189 4.355 51.786 51.071 LGA S 13 S 13 3.108 0 0.133 0.170 3.247 50.000 52.381 LGA D 14 D 14 2.845 0 0.675 0.954 4.295 52.143 56.012 LGA G 15 G 15 1.596 0 0.665 0.665 1.810 79.405 79.405 LGA V 16 V 16 1.941 0 0.164 1.174 5.066 68.810 60.612 LGA H 17 H 17 1.397 0 0.159 0.334 3.666 88.333 73.238 LGA K 18 K 18 0.536 0 0.290 0.969 6.573 88.214 69.471 LGA I 19 I 19 0.975 0 0.167 0.211 2.099 92.857 80.833 LGA E 20 E 20 0.686 0 0.064 0.540 2.156 90.476 82.698 LGA F 21 F 21 1.407 0 0.095 0.965 6.060 79.286 55.584 LGA E 22 E 22 1.328 0 0.218 0.676 2.423 79.286 73.968 LGA H 23 H 23 2.690 0 0.414 0.593 5.640 71.071 46.476 LGA G 24 G 24 1.653 0 0.199 0.199 2.622 68.929 68.929 LGA T 25 T 25 1.825 0 0.290 1.252 4.290 60.000 60.136 LGA T 26 T 26 3.440 0 0.074 1.370 4.948 45.476 42.857 LGA S 27 S 27 4.110 0 0.032 0.567 5.166 37.619 42.063 LGA G 28 G 28 3.553 0 0.533 0.533 4.924 40.476 40.476 LGA K 29 K 29 6.460 0 0.113 0.686 15.159 25.357 11.640 LGA R 30 R 30 2.970 0 0.036 0.755 9.808 38.214 25.022 LGA V 31 V 31 4.831 0 0.098 0.274 9.193 40.476 25.442 LGA V 32 V 32 2.563 0 0.120 0.125 5.660 48.929 40.068 LGA Y 33 Y 33 4.297 0 0.425 1.319 14.080 42.143 15.556 LGA V 34 V 34 1.812 0 0.096 0.139 5.051 67.143 52.789 LGA D 35 D 35 3.469 0 0.627 0.593 4.367 46.905 45.179 LGA G 36 G 36 7.508 0 0.115 0.115 8.606 8.571 8.571 LGA K 37 K 37 7.864 0 0.638 0.823 10.243 5.833 3.651 LGA E 38 E 38 9.238 0 0.416 0.669 14.743 1.548 0.688 LGA E 39 E 39 9.529 0 0.639 0.991 10.326 0.952 0.582 LGA I 40 I 40 9.688 0 0.199 0.191 14.217 1.310 0.655 LGA R 41 R 41 9.047 0 0.241 1.074 16.282 2.619 1.082 LGA K 42 K 42 9.855 0 0.619 1.209 12.892 0.238 0.106 LGA E 43 E 43 13.410 0 0.112 1.165 18.467 0.000 0.000 LGA W 44 W 44 17.584 0 0.630 1.405 27.215 0.000 0.000 LGA M 45 M 45 15.879 0 0.240 0.912 16.796 0.000 0.000 LGA F 46 F 46 17.490 0 0.547 1.127 25.969 0.000 0.000 LGA K 47 K 47 12.456 0 0.102 0.830 13.962 0.000 0.000 LGA L 48 L 48 9.176 0 0.068 0.425 14.092 8.214 4.107 LGA V 49 V 49 5.924 0 0.074 1.104 9.016 25.833 16.667 LGA G 50 G 50 2.437 0 0.606 0.606 6.031 42.262 42.262 LGA K 51 K 51 6.989 0 0.617 0.678 14.741 20.833 9.894 LGA E 52 E 52 5.214 0 0.097 0.723 5.964 23.810 26.349 LGA T 53 T 53 6.306 0 0.165 0.974 6.814 18.452 19.116 LGA F 54 F 54 9.159 0 0.267 1.315 11.618 1.548 10.909 LGA Y 55 Y 55 14.810 0 0.682 1.228 17.575 0.000 0.000 LGA V 56 V 56 15.191 0 0.582 1.365 16.785 0.000 0.000 LGA G 57 G 57 20.919 0 0.464 0.464 21.349 0.000 0.000 LGA A 58 A 58 23.915 0 0.584 0.591 26.490 0.000 0.000 LGA A 59 A 59 24.323 0 0.114 0.160 24.725 0.000 0.000 LGA K 60 K 60 22.898 0 0.311 0.980 29.632 0.000 0.000 LGA T 61 T 61 17.547 0 0.607 1.087 19.591 0.000 0.000 LGA K 62 K 62 13.152 0 0.116 0.772 15.110 0.000 0.000 LGA A 63 A 63 7.929 0 0.116 0.136 9.728 7.738 7.619 LGA T 64 T 64 4.779 0 0.078 0.104 6.812 46.905 36.939 LGA I 65 I 65 3.645 0 0.120 0.651 6.627 31.548 35.655 LGA N 66 N 66 7.372 0 0.160 0.440 9.397 8.571 13.631 LGA I 67 I 67 12.454 0 0.169 0.245 14.802 0.000 0.000 LGA D 68 D 68 17.173 0 0.157 1.272 18.531 0.000 0.000 LGA A 69 A 69 21.754 0 0.203 0.235 22.653 0.000 0.000 LGA I 70 I 70 25.947 0 0.538 0.966 27.884 0.000 0.000 LGA S 71 S 71 29.437 0 0.692 0.816 30.803 0.000 0.000 LGA G 72 G 72 34.264 0 0.104 0.104 34.403 0.000 0.000 LGA F 73 F 73 30.828 0 0.512 0.892 33.957 0.000 0.000 LGA A 74 A 74 27.807 0 0.318 0.396 29.249 0.000 0.000 LGA Y 75 Y 75 23.545 0 0.162 1.282 30.010 0.000 0.000 LGA E 76 E 76 19.496 0 0.346 1.105 21.006 0.000 0.000 LGA Y 77 Y 77 14.561 0 0.140 1.223 21.467 0.000 0.000 LGA T 78 T 78 10.399 0 0.119 0.232 12.535 0.833 0.544 LGA L 79 L 79 6.062 0 0.130 1.415 6.727 25.000 32.857 LGA E 80 E 80 7.309 0 0.254 0.315 14.184 8.810 3.968 LGA I 81 I 81 9.321 0 0.185 1.144 10.761 2.262 3.512 LGA N 82 N 82 15.258 0 0.591 1.233 18.466 0.000 0.000 LGA G 83 G 83 15.464 0 0.199 0.199 15.824 0.000 0.000 LGA K 84 K 84 10.270 0 0.200 0.724 11.943 0.000 0.053 LGA S 85 S 85 9.149 0 0.656 0.828 11.704 2.857 1.905 LGA L 86 L 86 5.049 0 0.576 0.580 8.218 29.048 22.440 LGA K 87 K 87 2.887 0 0.643 1.794 6.722 42.976 43.333 LGA K 88 K 88 3.060 0 0.625 1.485 8.575 61.190 34.762 LGA Y 89 Y 89 2.298 0 0.611 0.937 14.743 52.381 21.706 LGA M 90 M 90 7.796 0 0.575 1.079 12.243 10.714 5.595 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 10.575 10.435 10.999 28.073 23.801 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 36 2.73 34.167 30.246 1.274 LGA_LOCAL RMSD: 2.726 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.116 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 10.575 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.892451 * X + 0.382195 * Y + 0.239707 * Z + -2.529603 Y_new = 0.444687 * X + -0.655644 * Y + -0.610233 * Z + 56.730122 Z_new = -0.076065 * X + 0.651197 * Y + -0.755087 * Z + -4.908154 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.462267 0.076139 2.429936 [DEG: 26.4860 4.3624 139.2251 ] ZXZ: 0.374294 2.426583 -0.116282 [DEG: 21.4455 139.0330 -6.6624 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS345_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS345_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 36 2.73 30.246 10.58 REMARK ---------------------------------------------------------- MOLECULE T0540TS345_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 34.072 5.154 7.905 1.00 0.00 N ATOM 2 CA MET 1 34.749 5.772 8.746 1.00 0.00 C ATOM 3 C MET 1 34.086 6.452 9.742 1.00 0.00 C ATOM 4 O MET 1 33.010 5.875 9.850 1.00 0.00 O ATOM 5 CB MET 1 36.024 6.380 8.147 1.00 0.00 C ATOM 6 CG MET 1 36.923 7.035 9.225 1.00 0.00 C ATOM 7 SD MET 1 38.527 7.739 8.764 1.00 0.00 S ATOM 8 CE MET 1 39.521 6.233 8.416 1.00 0.00 C ATOM 9 N THR 2 34.483 7.411 10.573 1.00 0.00 N ATOM 10 CA THR 2 33.839 8.086 11.620 1.00 0.00 C ATOM 11 C THR 2 32.322 8.370 11.191 1.00 0.00 C ATOM 12 O THR 2 31.284 7.976 11.709 1.00 0.00 O ATOM 13 CB THR 2 34.849 8.827 12.519 1.00 0.00 C ATOM 14 OG1 THR 2 36.098 8.119 12.529 1.00 0.00 O ATOM 15 CG2 THR 2 34.323 8.909 13.945 1.00 0.00 C ATOM 16 N ASP 3 32.334 9.175 10.144 1.00 0.00 N ATOM 17 CA ASP 3 30.956 9.476 9.572 1.00 0.00 C ATOM 18 C ASP 3 31.529 9.967 8.221 1.00 0.00 C ATOM 19 O ASP 3 31.979 11.115 8.223 1.00 0.00 O ATOM 20 CB ASP 3 30.249 10.549 10.385 1.00 0.00 C ATOM 21 CG ASP 3 28.824 10.766 9.945 1.00 0.00 C ATOM 22 OD1 ASP 3 28.338 9.988 9.091 1.00 0.00 O ATOM 23 OD2 ASP 3 28.189 11.711 10.462 1.00 0.00 O ATOM 24 N LEU 4 31.468 9.207 7.189 1.00 0.00 N ATOM 25 CA LEU 4 31.918 9.416 5.896 1.00 0.00 C ATOM 26 C LEU 4 33.178 9.725 5.522 1.00 0.00 C ATOM 27 O LEU 4 33.711 10.627 6.167 1.00 0.00 O ATOM 28 CB LEU 4 30.805 10.160 5.152 1.00 0.00 C ATOM 29 CG LEU 4 30.879 10.084 3.606 1.00 0.00 C ATOM 30 CD1 LEU 4 30.760 8.632 3.149 1.00 0.00 C ATOM 31 CD2 LEU 4 29.758 10.918 2.975 1.00 0.00 C ATOM 32 N VAL 5 33.789 9.076 4.534 1.00 0.00 N ATOM 33 CA VAL 5 35.256 9.321 4.080 1.00 0.00 C ATOM 34 C VAL 5 34.983 9.750 2.598 1.00 0.00 C ATOM 35 O VAL 5 35.079 8.888 1.716 1.00 0.00 O ATOM 36 CB VAL 5 36.286 8.170 4.049 1.00 0.00 C ATOM 37 CG1 VAL 5 37.474 8.564 3.199 1.00 0.00 C ATOM 38 CG2 VAL 5 36.738 7.823 5.464 1.00 0.00 C ATOM 39 N ALA 6 34.691 11.045 2.307 1.00 0.00 N ATOM 40 CA ALA 6 34.363 11.198 0.900 1.00 0.00 C ATOM 41 C ALA 6 35.381 11.712 -0.019 1.00 0.00 C ATOM 42 O ALA 6 36.069 12.646 0.393 1.00 0.00 O ATOM 43 CB ALA 6 33.361 12.360 1.025 1.00 0.00 C ATOM 44 N VAL 7 35.575 11.147 -1.206 1.00 0.00 N ATOM 45 CA VAL 7 36.600 11.742 -2.125 1.00 0.00 C ATOM 46 C VAL 7 35.923 12.195 -3.358 1.00 0.00 C ATOM 47 O VAL 7 35.301 11.492 -4.145 1.00 0.00 O ATOM 48 CB VAL 7 37.568 10.645 -2.651 1.00 0.00 C ATOM 49 CG1 VAL 7 38.460 11.206 -3.747 1.00 0.00 C ATOM 50 CG2 VAL 7 38.427 10.097 -1.509 1.00 0.00 C ATOM 51 N TRP 8 35.951 13.499 -3.491 1.00 0.00 N ATOM 52 CA TRP 8 35.347 14.238 -4.699 1.00 0.00 C ATOM 53 C TRP 8 36.403 14.189 -5.867 1.00 0.00 C ATOM 54 O TRP 8 36.694 13.220 -6.583 1.00 0.00 O ATOM 55 CB TRP 8 34.204 15.179 -4.303 1.00 0.00 C ATOM 56 CG TRP 8 33.047 14.514 -3.644 1.00 0.00 C ATOM 57 CD1 TRP 8 32.574 14.753 -2.385 1.00 0.00 C ATOM 58 CD2 TRP 8 32.220 13.482 -4.194 1.00 0.00 C ATOM 59 NE1 TRP 8 31.508 13.928 -2.115 1.00 0.00 N ATOM 60 CE2 TRP 8 31.269 13.137 -3.207 1.00 0.00 C ATOM 61 CE3 TRP 8 32.192 12.811 -5.425 1.00 0.00 C ATOM 62 CZ2 TRP 8 30.299 12.149 -3.410 1.00 0.00 C ATOM 63 CZ3 TRP 8 31.218 11.817 -5.626 1.00 0.00 C ATOM 64 CH2 TRP 8 30.292 11.503 -4.621 1.00 0.00 H ATOM 65 N ASP 9 36.865 15.398 -6.173 1.00 0.00 N ATOM 66 CA ASP 9 37.981 15.484 -7.142 1.00 0.00 C ATOM 67 C ASP 9 37.793 17.209 -7.437 1.00 0.00 C ATOM 68 O ASP 9 36.807 17.952 -7.504 1.00 0.00 O ATOM 69 CB ASP 9 38.162 14.661 -8.424 1.00 0.00 C ATOM 70 CG ASP 9 39.498 14.903 -9.111 1.00 0.00 C ATOM 71 OD1 ASP 9 40.554 14.794 -8.456 1.00 0.00 O ATOM 72 OD2 ASP 9 39.490 15.166 -10.329 1.00 0.00 O ATOM 73 N VAL 10 39.052 17.664 -7.492 1.00 0.00 N ATOM 74 CA VAL 10 39.691 18.773 -7.958 1.00 0.00 C ATOM 75 C VAL 10 39.850 19.776 -8.881 1.00 0.00 C ATOM 76 O VAL 10 40.828 19.248 -9.407 1.00 0.00 O ATOM 77 CB VAL 10 38.829 18.165 -9.084 1.00 0.00 C ATOM 78 CG1 VAL 10 38.020 19.250 -9.740 1.00 0.00 C ATOM 79 CG2 VAL 10 39.723 17.473 -10.124 1.00 0.00 C ATOM 80 N ALA 11 39.303 20.895 -9.338 1.00 0.00 N ATOM 81 CA ALA 11 39.887 21.711 -10.363 1.00 0.00 C ATOM 82 C ALA 11 40.542 22.810 -9.607 1.00 0.00 C ATOM 83 O ALA 11 39.952 23.851 -9.330 1.00 0.00 O ATOM 84 CB ALA 11 38.742 22.709 -10.595 1.00 0.00 C ATOM 85 N LEU 12 41.822 22.581 -9.334 1.00 0.00 N ATOM 86 CA LEU 12 42.713 23.529 -8.590 1.00 0.00 C ATOM 87 C LEU 12 43.603 24.001 -9.847 1.00 0.00 C ATOM 88 O LEU 12 43.663 23.316 -10.868 1.00 0.00 O ATOM 89 CB LEU 12 43.340 23.087 -7.268 1.00 0.00 C ATOM 90 CG LEU 12 44.243 24.130 -6.576 1.00 0.00 C ATOM 91 CD1 LEU 12 44.290 23.847 -5.076 1.00 0.00 C ATOM 92 CD2 LEU 12 45.634 24.095 -7.196 1.00 0.00 C ATOM 93 N SER 13 44.281 25.137 -9.716 1.00 0.00 N ATOM 94 CA SER 13 45.097 25.487 -10.810 1.00 0.00 C ATOM 95 C SER 13 46.398 24.717 -10.911 1.00 0.00 C ATOM 96 O SER 13 47.105 24.779 -11.918 1.00 0.00 O ATOM 97 CB SER 13 45.240 27.012 -10.780 1.00 0.00 C ATOM 98 OG SER 13 46.014 27.435 -9.672 1.00 0.00 O ATOM 99 N ASP 14 46.673 23.905 -9.900 1.00 0.00 N ATOM 100 CA ASP 14 47.880 23.066 -9.899 1.00 0.00 C ATOM 101 C ASP 14 47.050 21.840 -10.135 1.00 0.00 C ATOM 102 O ASP 14 46.109 21.591 -9.382 1.00 0.00 O ATOM 103 CB ASP 14 48.249 22.649 -8.497 1.00 0.00 C ATOM 104 CG ASP 14 49.716 22.874 -8.210 1.00 0.00 C ATOM 105 OD1 ASP 14 50.528 22.011 -8.558 1.00 0.00 O ATOM 106 OD2 ASP 14 50.025 23.924 -7.647 1.00 0.00 O ATOM 107 N GLY 15 47.292 21.128 -11.233 1.00 0.00 N ATOM 108 CA GLY 15 46.327 20.126 -11.738 1.00 0.00 C ATOM 109 C GLY 15 45.333 19.076 -11.178 1.00 0.00 C ATOM 110 O GLY 15 44.273 18.753 -11.739 1.00 0.00 O ATOM 111 N VAL 16 45.862 18.387 -10.144 1.00 0.00 N ATOM 112 CA VAL 16 44.973 17.188 -9.744 1.00 0.00 C ATOM 113 C VAL 16 45.036 17.653 -8.257 1.00 0.00 C ATOM 114 O VAL 16 46.097 17.977 -7.737 1.00 0.00 O ATOM 115 CB VAL 16 45.486 15.745 -9.812 1.00 0.00 C ATOM 116 CG1 VAL 16 44.617 14.833 -8.951 1.00 0.00 C ATOM 117 CG2 VAL 16 45.452 15.245 -11.252 1.00 0.00 C ATOM 118 N HIS 17 43.854 17.775 -7.635 1.00 0.00 N ATOM 119 CA HIS 17 43.619 18.216 -6.346 1.00 0.00 C ATOM 120 C HIS 17 42.368 17.362 -6.225 1.00 0.00 C ATOM 121 O HIS 17 41.367 17.331 -6.956 1.00 0.00 O ATOM 122 CB HIS 17 42.885 19.540 -6.055 1.00 0.00 C ATOM 123 CG HIS 17 43.787 20.711 -6.338 1.00 0.00 C ATOM 124 ND1 HIS 17 44.119 21.085 -7.637 1.00 0.00 N ATOM 125 CD2 HIS 17 44.413 21.572 -5.488 1.00 0.00 C ATOM 126 CE1 HIS 17 44.915 22.144 -7.587 1.00 0.00 C ATOM 127 NE2 HIS 17 45.104 22.452 -6.324 1.00 0.00 N ATOM 128 N LYS 18 42.552 16.556 -5.191 1.00 0.00 N ATOM 129 CA LYS 18 41.768 15.371 -4.638 1.00 0.00 C ATOM 130 C LYS 18 41.010 15.590 -3.443 1.00 0.00 C ATOM 131 O LYS 18 41.457 15.069 -2.421 1.00 0.00 O ATOM 132 CB LYS 18 42.428 14.022 -4.330 1.00 0.00 C ATOM 133 CG LYS 18 41.511 12.994 -3.695 1.00 0.00 C ATOM 134 CD LYS 18 42.168 11.617 -3.624 1.00 0.00 C ATOM 135 CE LYS 18 43.492 11.654 -2.869 1.00 0.00 C ATOM 136 NZ LYS 18 44.152 10.313 -2.883 1.00 0.00 N ATOM 137 N ILE 19 39.943 16.409 -3.423 1.00 0.00 N ATOM 138 CA ILE 19 39.303 16.812 -2.129 1.00 0.00 C ATOM 139 C ILE 19 38.578 15.741 -1.350 1.00 0.00 C ATOM 140 O ILE 19 37.540 15.213 -1.766 1.00 0.00 O ATOM 141 CB ILE 19 38.280 17.915 -2.442 1.00 0.00 C ATOM 142 CG1 ILE 19 39.034 19.106 -3.049 1.00 0.00 C ATOM 143 CG2 ILE 19 37.574 18.362 -1.175 1.00 0.00 C ATOM 144 CD1 ILE 19 38.173 20.203 -3.623 1.00 0.00 C ATOM 145 N GLU 20 39.227 15.292 -0.279 1.00 0.00 N ATOM 146 CA GLU 20 38.676 14.218 0.575 1.00 0.00 C ATOM 147 C GLU 20 38.129 14.785 1.760 1.00 0.00 C ATOM 148 O GLU 20 38.712 15.747 2.253 1.00 0.00 O ATOM 149 CB GLU 20 39.797 13.210 0.743 1.00 0.00 C ATOM 150 CG GLU 20 39.402 11.960 1.468 1.00 0.00 C ATOM 151 CD GLU 20 40.528 10.962 1.498 1.00 0.00 C ATOM 152 OE1 GLU 20 41.685 11.333 1.242 1.00 0.00 O ATOM 153 OE2 GLU 20 40.275 9.797 1.782 1.00 0.00 O ATOM 154 N PHE 21 37.005 14.307 2.266 1.00 0.00 N ATOM 155 CA PHE 21 36.410 15.003 3.522 1.00 0.00 C ATOM 156 C PHE 21 35.929 13.969 4.543 1.00 0.00 C ATOM 157 O PHE 21 35.446 12.922 4.112 1.00 0.00 O ATOM 158 CB PHE 21 35.147 15.770 3.407 1.00 0.00 C ATOM 159 CG PHE 21 35.131 17.046 2.639 1.00 0.00 C ATOM 160 CD1 PHE 21 35.774 18.156 3.091 1.00 0.00 C ATOM 161 CD2 PHE 21 34.394 17.164 1.482 1.00 0.00 C ATOM 162 CE1 PHE 21 35.717 19.363 2.451 1.00 0.00 C ATOM 163 CE2 PHE 21 34.297 18.346 0.785 1.00 0.00 C ATOM 164 CZ PHE 21 34.962 19.429 1.306 1.00 0.00 C ATOM 165 N GLU 22 36.040 14.212 5.846 1.00 0.00 N ATOM 166 CA GLU 22 35.625 13.211 6.779 1.00 0.00 C ATOM 167 C GLU 22 34.808 14.195 7.806 1.00 0.00 C ATOM 168 O GLU 22 35.149 14.892 8.754 1.00 0.00 O ATOM 169 CB GLU 22 36.687 12.651 7.730 1.00 0.00 C ATOM 170 CG GLU 22 36.099 11.614 8.693 1.00 0.00 C ATOM 171 CD GLU 22 37.116 10.980 9.626 1.00 0.00 C ATOM 172 OE1 GLU 22 38.024 11.691 10.115 1.00 0.00 O ATOM 173 OE2 GLU 22 36.987 9.765 9.889 1.00 0.00 O ATOM 174 N HIS 23 33.543 13.932 7.519 1.00 0.00 N ATOM 175 CA HIS 23 32.306 14.389 8.203 1.00 0.00 C ATOM 176 C HIS 23 32.247 13.854 9.578 1.00 0.00 C ATOM 177 O HIS 23 31.170 13.442 10.028 1.00 0.00 O ATOM 178 CB HIS 23 30.933 13.869 7.747 1.00 0.00 C ATOM 179 CG HIS 23 29.779 14.518 8.458 1.00 0.00 C ATOM 180 ND1 HIS 23 29.482 15.844 8.315 1.00 0.00 N ATOM 181 CD2 HIS 23 28.852 14.006 9.297 1.00 0.00 C ATOM 182 CE1 HIS 23 28.428 16.146 9.048 1.00 0.00 C ATOM 183 NE2 HIS 23 28.028 15.045 9.660 1.00 0.00 N ATOM 184 N GLY 24 33.345 13.880 10.340 1.00 0.00 N ATOM 185 CA GLY 24 33.235 13.213 11.694 1.00 0.00 C ATOM 186 C GLY 24 32.900 14.736 12.247 1.00 0.00 C ATOM 187 O GLY 24 33.698 15.665 12.198 1.00 0.00 O ATOM 188 N THR 25 31.602 14.907 12.475 1.00 0.00 N ATOM 189 CA THR 25 30.950 15.949 13.012 1.00 0.00 C ATOM 190 C THR 25 31.536 16.795 14.140 1.00 0.00 C ATOM 191 O THR 25 32.018 17.902 14.018 1.00 0.00 O ATOM 192 CB THR 25 29.466 16.122 12.657 1.00 0.00 C ATOM 193 OG1 THR 25 29.461 16.182 11.257 1.00 0.00 O ATOM 194 CG2 THR 25 28.813 17.379 13.280 1.00 0.00 C ATOM 195 N THR 26 31.443 16.171 15.275 1.00 0.00 N ATOM 196 CA THR 26 31.942 16.954 16.541 1.00 0.00 C ATOM 197 C THR 26 33.300 17.616 16.104 1.00 0.00 C ATOM 198 O THR 26 33.516 18.809 16.304 1.00 0.00 O ATOM 199 CB THR 26 31.171 16.464 17.782 1.00 0.00 C ATOM 200 OG1 THR 26 32.115 15.984 18.745 1.00 0.00 O ATOM 201 CG2 THR 26 30.193 15.350 17.433 1.00 0.00 C ATOM 202 N SER 27 34.135 16.820 15.458 1.00 0.00 N ATOM 203 CA SER 27 35.379 17.169 14.935 1.00 0.00 C ATOM 204 C SER 27 35.227 18.203 13.813 1.00 0.00 C ATOM 205 O SER 27 36.205 18.793 13.368 1.00 0.00 O ATOM 206 CB SER 27 36.026 16.090 14.049 1.00 0.00 C ATOM 207 OG SER 27 36.362 14.923 14.778 1.00 0.00 O ATOM 208 N GLY 28 33.968 18.617 13.609 1.00 0.00 N ATOM 209 CA GLY 28 33.830 19.788 12.658 1.00 0.00 C ATOM 210 C GLY 28 33.657 19.456 11.050 1.00 0.00 C ATOM 211 O GLY 28 32.697 18.901 10.483 1.00 0.00 O ATOM 212 N LYS 29 34.707 19.905 10.384 1.00 0.00 N ATOM 213 CA LYS 29 34.636 19.602 8.949 1.00 0.00 C ATOM 214 C LYS 29 36.180 19.669 8.712 1.00 0.00 C ATOM 215 O LYS 29 36.828 20.671 8.998 1.00 0.00 O ATOM 216 CB LYS 29 33.848 20.537 8.009 1.00 0.00 C ATOM 217 CG LYS 29 33.731 20.211 6.524 1.00 0.00 C ATOM 218 CD LYS 29 32.738 21.216 5.948 1.00 0.00 C ATOM 219 CE LYS 29 32.667 21.216 4.422 1.00 0.00 C ATOM 220 NZ LYS 29 31.713 22.207 3.940 1.00 0.00 N ATOM 221 N ARG 30 36.727 18.559 8.233 1.00 0.00 N ATOM 222 CA ARG 30 38.106 18.471 7.893 1.00 0.00 C ATOM 223 C ARG 30 38.232 18.298 6.336 1.00 0.00 C ATOM 224 O ARG 30 37.563 17.471 5.724 1.00 0.00 O ATOM 225 CB ARG 30 38.831 17.380 8.663 1.00 0.00 C ATOM 226 CG ARG 30 38.733 17.406 10.168 1.00 0.00 C ATOM 227 CD ARG 30 39.494 16.261 10.828 1.00 0.00 C ATOM 228 NE ARG 30 39.228 16.207 12.253 1.00 0.00 N ATOM 229 CZ ARG 30 39.890 16.790 13.223 1.00 0.00 C ATOM 230 NH1 ARG 30 40.965 17.500 12.912 1.00 0.00 H ATOM 231 NH2 ARG 30 39.460 16.667 14.475 1.00 0.00 H ATOM 232 N VAL 31 39.045 19.162 5.741 1.00 0.00 N ATOM 233 CA VAL 31 39.341 19.099 4.356 1.00 0.00 C ATOM 234 C VAL 31 40.599 18.794 3.933 1.00 0.00 C ATOM 235 O VAL 31 41.490 19.526 4.363 1.00 0.00 O ATOM 236 CB VAL 31 39.093 20.476 3.704 1.00 0.00 C ATOM 237 CG1 VAL 31 39.482 20.450 2.230 1.00 0.00 C ATOM 238 CG2 VAL 31 37.639 20.864 3.837 1.00 0.00 C ATOM 239 N VAL 32 40.842 17.676 3.263 1.00 0.00 N ATOM 240 CA VAL 32 42.314 17.263 2.867 1.00 0.00 C ATOM 241 C VAL 32 42.159 17.550 1.416 1.00 0.00 C ATOM 242 O VAL 32 41.218 17.171 0.732 1.00 0.00 O ATOM 243 CB VAL 32 42.557 15.745 3.071 1.00 0.00 C ATOM 244 CG1 VAL 32 43.825 15.304 2.346 1.00 0.00 C ATOM 245 CG2 VAL 32 42.665 15.439 4.562 1.00 0.00 C ATOM 246 N TYR 33 43.145 18.297 0.941 1.00 0.00 N ATOM 247 CA TYR 33 43.209 18.890 -0.449 1.00 0.00 C ATOM 248 C TYR 33 44.604 18.582 -1.041 1.00 0.00 C ATOM 249 O TYR 33 45.338 19.446 -1.537 1.00 0.00 O ATOM 250 CB TYR 33 43.514 20.410 -0.614 1.00 0.00 C ATOM 251 CG TYR 33 42.356 21.307 -0.201 1.00 0.00 C ATOM 252 CD1 TYR 33 42.168 21.708 1.128 1.00 0.00 C ATOM 253 CD2 TYR 33 41.436 21.744 -1.158 1.00 0.00 C ATOM 254 CE1 TYR 33 41.093 22.525 1.502 1.00 0.00 C ATOM 255 CE2 TYR 33 40.356 22.559 -0.813 1.00 0.00 C ATOM 256 CZ TYR 33 40.188 22.945 0.523 1.00 0.00 C ATOM 257 OH TYR 33 39.129 23.756 0.856 1.00 0.00 H ATOM 258 N VAL 34 44.926 17.279 -1.016 1.00 0.00 N ATOM 259 CA VAL 34 45.903 16.535 -1.727 1.00 0.00 C ATOM 260 C VAL 34 46.163 16.643 -3.139 1.00 0.00 C ATOM 261 O VAL 34 45.176 16.511 -3.875 1.00 0.00 O ATOM 262 CB VAL 34 45.954 15.090 -1.164 1.00 0.00 C ATOM 263 CG1 VAL 34 47.243 14.406 -1.604 1.00 0.00 C ATOM 264 CG2 VAL 34 45.849 15.120 0.355 1.00 0.00 C ATOM 265 N ASP 35 47.390 16.812 -3.608 1.00 0.00 N ATOM 266 CA ASP 35 47.599 16.845 -5.113 1.00 0.00 C ATOM 267 C ASP 35 47.423 15.400 -5.704 1.00 0.00 C ATOM 268 O ASP 35 46.544 14.648 -5.270 1.00 0.00 O ATOM 269 CB ASP 35 48.885 17.574 -5.487 1.00 0.00 C ATOM 270 CG ASP 35 48.811 19.077 -5.373 1.00 0.00 C ATOM 271 OD1 ASP 35 47.708 19.641 -5.411 1.00 0.00 O ATOM 272 OD2 ASP 35 49.917 19.625 -5.229 1.00 0.00 O ATOM 273 N GLY 36 48.215 14.932 -6.678 1.00 0.00 N ATOM 274 CA GLY 36 47.906 13.687 -7.203 1.00 0.00 C ATOM 275 C GLY 36 48.557 12.510 -6.443 1.00 0.00 C ATOM 276 O GLY 36 48.083 11.385 -6.554 1.00 0.00 O ATOM 277 N LYS 37 49.622 12.757 -5.692 1.00 0.00 N ATOM 278 CA LYS 37 50.239 11.768 -4.896 1.00 0.00 C ATOM 279 C LYS 37 49.842 11.060 -3.702 1.00 0.00 C ATOM 280 O LYS 37 50.586 10.266 -3.104 1.00 0.00 O ATOM 281 CB LYS 37 51.748 11.929 -4.825 1.00 0.00 C ATOM 282 CG LYS 37 52.503 10.610 -4.774 1.00 0.00 C ATOM 283 CD LYS 37 53.997 10.819 -5.021 1.00 0.00 C ATOM 284 CE LYS 37 54.629 11.615 -3.867 1.00 0.00 C ATOM 285 NZ LYS 37 56.103 11.579 -3.950 1.00 0.00 N ATOM 286 N GLU 38 48.611 11.318 -3.282 1.00 0.00 N ATOM 287 CA GLU 38 48.028 10.573 -2.045 1.00 0.00 C ATOM 288 C GLU 38 48.895 10.647 -0.781 1.00 0.00 C ATOM 289 O GLU 38 49.080 9.664 -0.061 1.00 0.00 O ATOM 290 CB GLU 38 47.644 9.139 -1.729 1.00 0.00 C ATOM 291 CG GLU 38 46.790 8.562 -2.832 1.00 0.00 C ATOM 292 CD GLU 38 45.901 7.390 -2.412 1.00 0.00 C ATOM 293 OE1 GLU 38 46.065 6.832 -1.316 1.00 0.00 O ATOM 294 OE2 GLU 38 45.007 7.060 -3.195 1.00 0.00 O ATOM 295 N GLU 39 49.419 11.841 -0.515 1.00 0.00 N ATOM 296 CA GLU 39 50.208 12.110 0.661 1.00 0.00 C ATOM 297 C GLU 39 49.256 13.020 1.387 1.00 0.00 C ATOM 298 O GLU 39 48.565 13.960 0.967 1.00 0.00 O ATOM 299 CB GLU 39 51.436 13.007 0.460 1.00 0.00 C ATOM 300 CG GLU 39 52.709 12.240 0.159 1.00 0.00 C ATOM 301 CD GLU 39 53.891 13.108 -0.207 1.00 0.00 C ATOM 302 OE1 GLU 39 53.723 14.323 -0.425 1.00 0.00 O ATOM 303 OE2 GLU 39 55.018 12.567 -0.287 1.00 0.00 O ATOM 304 N ILE 40 49.201 12.563 2.630 1.00 0.00 N ATOM 305 CA ILE 40 48.321 12.868 3.870 1.00 0.00 C ATOM 306 C ILE 40 49.140 13.944 4.666 1.00 0.00 C ATOM 307 O ILE 40 50.007 13.452 5.388 1.00 0.00 O ATOM 308 CB ILE 40 47.424 11.865 4.591 1.00 0.00 C ATOM 309 CG1 ILE 40 46.407 11.241 3.630 1.00 0.00 C ATOM 310 CG2 ILE 40 46.700 12.543 5.764 1.00 0.00 C ATOM 311 CD1 ILE 40 45.506 10.185 4.226 1.00 0.00 C ATOM 312 N ARG 41 48.915 15.260 4.619 1.00 0.00 N ATOM 313 CA ARG 41 50.094 15.699 5.681 1.00 0.00 C ATOM 314 C ARG 41 49.531 16.303 6.782 1.00 0.00 C ATOM 315 O ARG 41 48.353 16.570 6.556 1.00 0.00 O ATOM 316 CB ARG 41 50.738 16.781 4.802 1.00 0.00 C ATOM 317 CG ARG 41 50.308 16.730 3.345 1.00 0.00 C ATOM 318 CD ARG 41 51.230 17.527 2.434 1.00 0.00 C ATOM 319 NE ARG 41 52.518 16.859 2.254 1.00 0.00 N ATOM 320 CZ ARG 41 53.028 16.520 1.074 1.00 0.00 C ATOM 321 NH1 ARG 41 52.368 16.804 -0.039 1.00 0.00 H ATOM 322 NH2 ARG 41 54.206 15.905 1.007 1.00 0.00 H ATOM 323 N LYS 42 50.137 16.592 7.932 1.00 0.00 N ATOM 324 CA LYS 42 49.514 17.327 9.066 1.00 0.00 C ATOM 325 C LYS 42 49.527 18.882 8.727 1.00 0.00 C ATOM 326 O LYS 42 48.879 19.692 9.392 1.00 0.00 O ATOM 327 CB LYS 42 50.374 17.181 10.320 1.00 0.00 C ATOM 328 CG LYS 42 49.973 18.146 11.406 1.00 0.00 C ATOM 329 CD LYS 42 50.795 18.011 12.678 1.00 0.00 C ATOM 330 CE LYS 42 50.304 19.035 13.726 1.00 0.00 C ATOM 331 NZ LYS 42 51.096 19.011 14.988 1.00 0.00 N ATOM 332 N GLU 43 50.413 19.253 7.820 1.00 0.00 N ATOM 333 CA GLU 43 50.506 20.654 7.523 1.00 0.00 C ATOM 334 C GLU 43 49.254 21.213 6.638 1.00 0.00 C ATOM 335 O GLU 43 48.545 22.209 6.796 1.00 0.00 O ATOM 336 CB GLU 43 51.915 20.922 6.976 1.00 0.00 C ATOM 337 CG GLU 43 52.117 22.349 6.497 1.00 0.00 C ATOM 338 CD GLU 43 53.573 22.783 6.506 1.00 0.00 C ATOM 339 OE1 GLU 43 54.085 23.114 7.607 1.00 0.00 O ATOM 340 OE2 GLU 43 54.201 22.809 5.413 1.00 0.00 O ATOM 341 N TRP 44 49.290 20.515 5.507 1.00 0.00 N ATOM 342 CA TRP 44 48.326 21.101 4.443 1.00 0.00 C ATOM 343 C TRP 44 46.911 20.625 4.556 1.00 0.00 C ATOM 344 O TRP 44 46.063 21.000 3.751 1.00 0.00 O ATOM 345 CB TRP 44 48.680 20.479 3.093 1.00 0.00 C ATOM 346 CG TRP 44 47.869 20.943 1.922 1.00 0.00 C ATOM 347 CD1 TRP 44 46.910 20.228 1.263 1.00 0.00 C ATOM 348 CD2 TRP 44 47.955 22.205 1.253 1.00 0.00 C ATOM 349 NE1 TRP 44 46.388 20.972 0.232 1.00 0.00 N ATOM 350 CE2 TRP 44 47.014 22.191 0.206 1.00 0.00 C ATOM 351 CE3 TRP 44 48.744 23.345 1.440 1.00 0.00 C ATOM 352 CZ2 TRP 44 46.825 23.275 -0.649 1.00 0.00 C ATOM 353 CZ3 TRP 44 48.555 24.420 0.586 1.00 0.00 C ATOM 354 CH2 TRP 44 47.606 24.377 -0.444 1.00 0.00 H ATOM 355 N MET 45 46.590 19.816 5.558 1.00 0.00 N ATOM 356 CA MET 45 45.165 19.469 5.779 1.00 0.00 C ATOM 357 C MET 45 44.498 20.745 6.614 1.00 0.00 C ATOM 358 O MET 45 44.668 21.050 7.792 1.00 0.00 O ATOM 359 CB MET 45 45.021 18.256 6.706 1.00 0.00 C ATOM 360 CG MET 45 45.655 17.016 6.160 1.00 0.00 C ATOM 361 SD MET 45 45.229 15.579 7.073 1.00 0.00 S ATOM 362 CE MET 45 46.157 14.438 6.166 1.00 0.00 C ATOM 363 N PHE 46 43.731 21.441 5.787 1.00 0.00 N ATOM 364 CA PHE 46 42.816 22.445 6.053 1.00 0.00 C ATOM 365 C PHE 46 41.588 22.428 6.718 1.00 0.00 C ATOM 366 O PHE 46 40.543 22.410 6.067 1.00 0.00 O ATOM 367 CB PHE 46 42.180 23.127 4.835 1.00 0.00 C ATOM 368 CG PHE 46 43.192 23.790 3.957 1.00 0.00 C ATOM 369 CD1 PHE 46 44.098 24.698 4.461 1.00 0.00 C ATOM 370 CD2 PHE 46 43.246 23.504 2.588 1.00 0.00 C ATOM 371 CE1 PHE 46 45.030 25.295 3.628 1.00 0.00 C ATOM 372 CE2 PHE 46 44.134 24.109 1.778 1.00 0.00 C ATOM 373 CZ PHE 46 45.047 25.047 2.267 1.00 0.00 C ATOM 374 N LYS 47 41.601 22.305 8.057 1.00 0.00 N ATOM 375 CA LYS 47 40.358 22.152 8.937 1.00 0.00 C ATOM 376 C LYS 47 39.541 23.515 8.633 1.00 0.00 C ATOM 377 O LYS 47 39.932 24.671 8.534 1.00 0.00 O ATOM 378 CB LYS 47 40.685 21.939 10.406 1.00 0.00 C ATOM 379 CG LYS 47 41.743 20.815 10.624 1.00 0.00 C ATOM 380 CD LYS 47 41.953 20.668 12.128 1.00 0.00 C ATOM 381 CE LYS 47 43.133 19.753 12.449 1.00 0.00 C ATOM 382 NZ LYS 47 43.092 19.517 13.934 1.00 0.00 N ATOM 383 N LEU 48 38.286 23.152 8.410 1.00 0.00 N ATOM 384 CA LEU 48 37.139 23.874 7.885 1.00 0.00 C ATOM 385 C LEU 48 36.214 24.495 8.925 1.00 0.00 C ATOM 386 O LEU 48 35.596 25.514 8.631 1.00 0.00 O ATOM 387 CB LEU 48 36.483 23.548 6.536 1.00 0.00 C ATOM 388 CG LEU 48 37.304 23.213 5.281 1.00 0.00 C ATOM 389 CD1 LEU 48 36.683 23.920 4.096 1.00 0.00 C ATOM 390 CD2 LEU 48 38.761 23.611 5.439 1.00 0.00 C ATOM 391 N VAL 49 36.084 23.904 10.099 1.00 0.00 N ATOM 392 CA VAL 49 35.399 24.489 11.207 1.00 0.00 C ATOM 393 C VAL 49 35.112 26.012 11.171 1.00 0.00 C ATOM 394 O VAL 49 35.960 26.740 10.663 1.00 0.00 O ATOM 395 CB VAL 49 35.853 23.953 12.569 1.00 0.00 C ATOM 396 CG1 VAL 49 34.866 24.366 13.660 1.00 0.00 C ATOM 397 CG2 VAL 49 35.937 22.431 12.527 1.00 0.00 C ATOM 398 N GLY 50 33.993 26.511 11.725 1.00 0.00 N ATOM 399 CA GLY 50 33.906 27.954 11.657 1.00 0.00 C ATOM 400 C GLY 50 35.051 28.902 12.187 1.00 0.00 C ATOM 401 O GLY 50 35.252 30.051 11.792 1.00 0.00 O ATOM 402 N LYS 51 35.746 28.363 13.181 1.00 0.00 N ATOM 403 CA LYS 51 36.767 29.253 13.794 1.00 0.00 C ATOM 404 C LYS 51 37.812 29.676 12.744 1.00 0.00 C ATOM 405 O LYS 51 38.268 30.812 12.725 1.00 0.00 O ATOM 406 CB LYS 51 37.037 28.869 15.244 1.00 0.00 C ATOM 407 CG LYS 51 38.166 27.907 15.493 1.00 0.00 C ATOM 408 CD LYS 51 38.064 27.309 16.898 1.00 0.00 C ATOM 409 CE LYS 51 38.716 25.914 16.939 1.00 0.00 C ATOM 410 NZ LYS 51 38.648 25.332 18.326 1.00 0.00 N ATOM 411 N GLU 52 38.230 28.704 11.942 1.00 0.00 N ATOM 412 CA GLU 52 39.203 28.946 10.892 1.00 0.00 C ATOM 413 C GLU 52 38.199 29.072 9.807 1.00 0.00 C ATOM 414 O GLU 52 37.351 28.192 9.653 1.00 0.00 O ATOM 415 CB GLU 52 39.697 27.659 10.218 1.00 0.00 C ATOM 416 CG GLU 52 40.669 27.932 9.067 1.00 0.00 C ATOM 417 CD GLU 52 41.932 28.684 9.497 1.00 0.00 C ATOM 418 OE1 GLU 52 42.328 28.584 10.681 1.00 0.00 O ATOM 419 OE2 GLU 52 42.549 29.364 8.643 1.00 0.00 O ATOM 420 N THR 53 38.164 30.221 9.139 1.00 0.00 N ATOM 421 CA THR 53 37.036 30.628 8.262 1.00 0.00 C ATOM 422 C THR 53 36.806 30.025 6.967 1.00 0.00 C ATOM 423 O THR 53 37.604 30.156 6.048 1.00 0.00 O ATOM 424 CB THR 53 37.393 32.137 8.048 1.00 0.00 C ATOM 425 OG1 THR 53 36.181 32.916 8.005 1.00 0.00 O ATOM 426 CG2 THR 53 38.199 32.391 6.773 1.00 0.00 C ATOM 427 N PHE 54 35.803 29.184 6.877 1.00 0.00 N ATOM 428 CA PHE 54 35.483 28.541 5.493 1.00 0.00 C ATOM 429 C PHE 54 34.065 28.896 5.065 1.00 0.00 C ATOM 430 O PHE 54 33.257 28.381 5.850 1.00 0.00 O ATOM 431 CB PHE 54 35.812 27.066 5.669 1.00 0.00 C ATOM 432 CG PHE 54 35.915 26.251 4.402 1.00 0.00 C ATOM 433 CD1 PHE 54 34.750 25.864 3.768 1.00 0.00 C ATOM 434 CD2 PHE 54 37.138 25.891 3.886 1.00 0.00 C ATOM 435 CE1 PHE 54 34.809 25.122 2.584 1.00 0.00 C ATOM 436 CE2 PHE 54 37.196 25.144 2.708 1.00 0.00 C ATOM 437 CZ PHE 54 36.033 24.762 2.052 1.00 0.00 C ATOM 438 N TYR 55 33.689 29.686 4.055 1.00 0.00 N ATOM 439 CA TYR 55 32.299 29.749 3.806 1.00 0.00 C ATOM 440 C TYR 55 31.672 29.062 2.741 1.00 0.00 C ATOM 441 O TYR 55 30.452 28.984 2.665 1.00 0.00 O ATOM 442 CB TYR 55 32.115 31.272 3.761 1.00 0.00 C ATOM 443 CG TYR 55 32.575 31.939 5.027 1.00 0.00 C ATOM 444 CD1 TYR 55 33.913 32.284 5.195 1.00 0.00 C ATOM 445 CD2 TYR 55 31.680 32.217 6.057 1.00 0.00 C ATOM 446 CE1 TYR 55 34.365 32.931 6.339 1.00 0.00 C ATOM 447 CE2 TYR 55 32.116 32.860 7.213 1.00 0.00 C ATOM 448 CZ TYR 55 33.462 33.199 7.358 1.00 0.00 C ATOM 449 OH TYR 55 33.893 33.819 8.501 1.00 0.00 H ATOM 450 N VAL 56 32.493 28.543 1.818 1.00 0.00 N ATOM 451 CA VAL 56 31.944 27.695 0.629 1.00 0.00 C ATOM 452 C VAL 56 31.471 28.482 -0.565 1.00 0.00 C ATOM 453 O VAL 56 31.961 28.248 -1.664 1.00 0.00 O ATOM 454 CB VAL 56 31.594 26.244 0.784 1.00 0.00 C ATOM 455 CG1 VAL 56 31.538 25.797 2.232 1.00 0.00 C ATOM 456 CG2 VAL 56 30.273 25.932 0.057 1.00 0.00 C ATOM 457 N GLY 57 30.432 29.309 -0.394 1.00 0.00 N ATOM 458 CA GLY 57 29.780 30.062 -1.411 1.00 0.00 C ATOM 459 C GLY 57 29.812 29.672 -2.822 1.00 0.00 C ATOM 460 O GLY 57 30.482 30.229 -3.692 1.00 0.00 O ATOM 461 N ALA 58 28.960 28.690 -3.096 1.00 0.00 N ATOM 462 CA ALA 58 28.548 27.656 -4.080 1.00 0.00 C ATOM 463 C ALA 58 27.257 27.662 -4.905 1.00 0.00 C ATOM 464 O ALA 58 26.288 27.182 -4.278 1.00 0.00 O ATOM 465 CB ALA 58 28.230 26.274 -3.512 1.00 0.00 C ATOM 466 N ALA 59 27.214 28.019 -6.187 1.00 0.00 N ATOM 467 CA ALA 59 26.109 27.872 -6.987 1.00 0.00 C ATOM 468 C ALA 59 26.008 27.180 -8.258 1.00 0.00 C ATOM 469 O ALA 59 24.862 27.015 -8.767 1.00 0.00 O ATOM 470 CB ALA 59 25.907 29.261 -7.522 1.00 0.00 C ATOM 471 N LYS 60 27.075 26.789 -8.946 1.00 0.00 N ATOM 472 CA LYS 60 26.916 26.108 -10.254 1.00 0.00 C ATOM 473 C LYS 60 28.070 25.271 -10.225 1.00 0.00 C ATOM 474 O LYS 60 29.108 25.781 -10.619 1.00 0.00 O ATOM 475 CB LYS 60 27.378 26.717 -11.576 1.00 0.00 C ATOM 476 CG LYS 60 26.371 27.528 -12.331 1.00 0.00 C ATOM 477 CD LYS 60 27.012 27.836 -13.656 1.00 0.00 C ATOM 478 CE LYS 60 26.269 28.845 -14.437 1.00 0.00 C ATOM 479 NZ LYS 60 26.998 29.054 -15.713 1.00 0.00 N ATOM 480 N THR 61 27.987 24.033 -9.732 1.00 0.00 N ATOM 481 CA THR 61 29.086 23.092 -9.463 1.00 0.00 C ATOM 482 C THR 61 30.440 23.523 -8.941 1.00 0.00 C ATOM 483 O THR 61 31.362 22.686 -8.890 1.00 0.00 O ATOM 484 CB THR 61 29.395 22.043 -10.505 1.00 0.00 C ATOM 485 OG1 THR 61 30.136 22.649 -11.573 1.00 0.00 O ATOM 486 CG2 THR 61 28.106 21.497 -11.063 1.00 0.00 C ATOM 487 N LYS 62 30.613 24.724 -8.414 1.00 0.00 N ATOM 488 CA LYS 62 31.731 25.213 -7.748 1.00 0.00 C ATOM 489 C LYS 62 31.879 24.872 -6.067 1.00 0.00 C ATOM 490 O LYS 62 30.883 24.950 -5.347 1.00 0.00 O ATOM 491 CB LYS 62 31.915 26.714 -7.955 1.00 0.00 C ATOM 492 CG LYS 62 32.254 27.125 -9.374 1.00 0.00 C ATOM 493 CD LYS 62 32.544 28.621 -9.459 1.00 0.00 C ATOM 494 CE LYS 62 32.605 29.143 -10.886 1.00 0.00 C ATOM 495 NZ LYS 62 31.953 30.447 -11.045 1.00 0.00 N ATOM 496 N ALA 63 33.091 24.637 -5.572 1.00 0.00 N ATOM 497 CA ALA 63 33.100 24.525 -4.271 1.00 0.00 C ATOM 498 C ALA 63 34.119 25.420 -3.892 1.00 0.00 C ATOM 499 O ALA 63 35.233 25.309 -4.395 1.00 0.00 O ATOM 500 CB ALA 63 33.513 23.074 -3.994 1.00 0.00 C ATOM 501 N THR 64 33.792 26.414 -3.074 1.00 0.00 N ATOM 502 CA THR 64 34.809 27.507 -2.651 1.00 0.00 C ATOM 503 C THR 64 35.296 27.105 -1.126 1.00 0.00 C ATOM 504 O THR 64 34.425 26.888 -0.297 1.00 0.00 O ATOM 505 CB THR 64 34.316 28.955 -2.846 1.00 0.00 C ATOM 506 OG1 THR 64 34.167 29.231 -4.249 1.00 0.00 O ATOM 507 CG2 THR 64 35.305 29.940 -2.219 1.00 0.00 C ATOM 508 N ILE 65 36.563 27.043 -0.810 1.00 0.00 N ATOM 509 CA ILE 65 36.962 26.737 0.383 1.00 0.00 C ATOM 510 C ILE 65 37.757 27.997 0.760 1.00 0.00 C ATOM 511 O ILE 65 38.904 28.190 0.367 1.00 0.00 O ATOM 512 CB ILE 65 37.896 25.519 0.322 1.00 0.00 C ATOM 513 CG1 ILE 65 37.233 24.202 -0.078 1.00 0.00 C ATOM 514 CG2 ILE 65 38.622 25.387 1.666 1.00 0.00 C ATOM 515 CD1 ILE 65 35.974 23.791 0.681 1.00 0.00 C ATOM 516 N ASN 66 37.068 28.891 1.455 1.00 0.00 N ATOM 517 CA ASN 66 37.695 30.141 1.896 1.00 0.00 C ATOM 518 C ASN 66 38.704 30.082 3.034 1.00 0.00 C ATOM 519 O ASN 66 38.219 29.776 4.121 1.00 0.00 O ATOM 520 CB ASN 66 36.593 31.183 1.834 1.00 0.00 C ATOM 521 CG ASN 66 36.053 31.337 0.415 1.00 0.00 C ATOM 522 OD1 ASN 66 36.830 31.509 -0.525 1.00 0.00 O ATOM 523 ND2 ASN 66 34.759 31.273 0.202 1.00 0.00 N ATOM 524 N ILE 67 40.011 30.313 2.878 1.00 0.00 N ATOM 525 CA ILE 67 40.580 30.097 4.365 1.00 0.00 C ATOM 526 C ILE 67 41.250 31.364 4.845 1.00 0.00 C ATOM 527 O ILE 67 41.578 32.263 4.060 1.00 0.00 O ATOM 528 CB ILE 67 41.660 29.039 4.039 1.00 0.00 C ATOM 529 CG1 ILE 67 40.985 27.725 3.637 1.00 0.00 C ATOM 530 CG2 ILE 67 42.558 28.803 5.251 1.00 0.00 C ATOM 531 CD1 ILE 67 41.949 26.611 3.340 1.00 0.00 C ATOM 532 N ASP 68 41.353 31.464 6.171 1.00 0.00 N ATOM 533 CA ASP 68 41.846 32.571 6.937 1.00 0.00 C ATOM 534 C ASP 68 41.979 32.232 8.269 1.00 0.00 C ATOM 535 O ASP 68 40.844 31.950 8.668 1.00 0.00 O ATOM 536 CB ASP 68 41.029 33.861 6.999 1.00 0.00 C ATOM 537 CG ASP 68 41.899 35.093 7.217 1.00 0.00 C ATOM 538 OD1 ASP 68 43.141 34.960 7.279 1.00 0.00 O ATOM 539 OD2 ASP 68 41.343 36.205 7.311 1.00 0.00 O ATOM 540 N ALA 69 43.054 32.193 9.053 1.00 0.00 N ATOM 541 CA ALA 69 43.403 32.151 10.373 1.00 0.00 C ATOM 542 C ALA 69 43.356 31.216 11.361 1.00 0.00 C ATOM 543 O ALA 69 42.222 30.840 11.687 1.00 0.00 O ATOM 544 CB ALA 69 43.063 33.416 11.153 1.00 0.00 C ATOM 545 N ILE 70 44.486 30.634 11.792 1.00 0.00 N ATOM 546 CA ILE 70 44.578 29.774 13.079 1.00 0.00 C ATOM 547 C ILE 70 45.434 28.791 12.185 1.00 0.00 C ATOM 548 O ILE 70 46.412 28.166 12.610 1.00 0.00 O ATOM 549 CB ILE 70 44.379 28.746 14.226 1.00 0.00 C ATOM 550 CG1 ILE 70 42.888 28.415 14.385 1.00 0.00 C ATOM 551 CG2 ILE 70 44.923 29.309 15.537 1.00 0.00 C ATOM 552 CD1 ILE 70 42.423 27.206 13.583 1.00 0.00 C ATOM 553 N SER 71 44.976 28.674 10.946 1.00 0.00 N ATOM 554 CA SER 71 45.650 27.850 9.986 1.00 0.00 C ATOM 555 C SER 71 47.063 27.993 9.565 1.00 0.00 C ATOM 556 O SER 71 47.645 27.107 8.927 1.00 0.00 O ATOM 557 CB SER 71 44.978 28.065 8.625 1.00 0.00 C ATOM 558 OG SER 71 45.087 29.408 8.196 1.00 0.00 O ATOM 559 N GLY 72 47.658 29.100 10.026 1.00 0.00 N ATOM 560 CA GLY 72 49.148 29.314 9.777 1.00 0.00 C ATOM 561 C GLY 72 49.145 29.558 8.199 1.00 0.00 C ATOM 562 O GLY 72 50.240 29.697 7.634 1.00 0.00 O ATOM 563 N PHE 73 48.004 29.354 7.541 1.00 0.00 N ATOM 564 CA PHE 73 48.047 29.621 6.159 1.00 0.00 C ATOM 565 C PHE 73 46.644 30.210 5.759 1.00 0.00 C ATOM 566 O PHE 73 45.557 29.847 6.225 1.00 0.00 O ATOM 567 CB PHE 73 48.049 28.354 5.292 1.00 0.00 C ATOM 568 CG PHE 73 49.330 27.575 5.398 1.00 0.00 C ATOM 569 CD1 PHE 73 50.451 27.959 4.676 1.00 0.00 C ATOM 570 CD2 PHE 73 49.431 26.490 6.255 1.00 0.00 C ATOM 571 CE1 PHE 73 51.645 27.279 4.814 1.00 0.00 C ATOM 572 CE2 PHE 73 50.628 25.807 6.397 1.00 0.00 C ATOM 573 CZ PHE 73 51.730 26.198 5.682 1.00 0.00 C ATOM 574 N ALA 74 46.776 31.205 4.887 1.00 0.00 N ATOM 575 CA ALA 74 45.680 31.932 4.290 1.00 0.00 C ATOM 576 C ALA 74 45.406 31.771 2.927 1.00 0.00 C ATOM 577 O ALA 74 46.079 32.493 2.184 1.00 0.00 O ATOM 578 CB ALA 74 45.741 33.409 4.696 1.00 0.00 C ATOM 579 N TYR 75 44.709 30.732 2.472 1.00 0.00 N ATOM 580 CA TYR 75 44.821 30.797 0.767 1.00 0.00 C ATOM 581 C TYR 75 43.290 30.515 0.725 1.00 0.00 C ATOM 582 O TYR 75 42.501 29.874 1.418 1.00 0.00 O ATOM 583 CB TYR 75 45.627 29.540 0.419 1.00 0.00 C ATOM 584 CG TYR 75 45.927 29.339 -1.056 1.00 0.00 C ATOM 585 CD1 TYR 75 47.073 29.880 -1.636 1.00 0.00 C ATOM 586 CD2 TYR 75 45.087 28.568 -1.862 1.00 0.00 C ATOM 587 CE1 TYR 75 47.372 29.653 -2.985 1.00 0.00 C ATOM 588 CE2 TYR 75 45.379 28.341 -3.200 1.00 0.00 C ATOM 589 CZ TYR 75 46.521 28.886 -3.750 1.00 0.00 C ATOM 590 OH TYR 75 46.796 28.650 -5.072 1.00 0.00 H ATOM 591 N GLU 76 42.907 31.346 -0.236 1.00 0.00 N ATOM 592 CA GLU 76 41.513 31.726 -0.856 1.00 0.00 C ATOM 593 C GLU 76 41.317 30.675 -2.036 1.00 0.00 C ATOM 594 O GLU 76 41.431 31.059 -3.208 1.00 0.00 O ATOM 595 CB GLU 76 41.189 33.185 -1.194 1.00 0.00 C ATOM 596 CG GLU 76 39.724 33.525 -1.159 1.00 0.00 C ATOM 597 CD GLU 76 38.990 32.837 -2.273 1.00 0.00 C ATOM 598 OE1 GLU 76 38.998 33.374 -3.400 1.00 0.00 O ATOM 599 OE2 GLU 76 38.413 31.757 -2.023 1.00 0.00 O ATOM 600 N TYR 77 40.969 29.398 -1.733 1.00 0.00 N ATOM 601 CA TYR 77 40.877 28.559 -2.855 1.00 0.00 C ATOM 602 C TYR 77 39.477 28.460 -3.694 1.00 0.00 C ATOM 603 O TYR 77 38.451 28.537 -3.018 1.00 0.00 O ATOM 604 CB TYR 77 41.275 27.207 -2.245 1.00 0.00 C ATOM 605 CG TYR 77 42.741 27.024 -1.935 1.00 0.00 C ATOM 606 CD1 TYR 77 43.690 26.949 -2.960 1.00 0.00 C ATOM 607 CD2 TYR 77 43.180 26.883 -0.620 1.00 0.00 C ATOM 608 CE1 TYR 77 45.039 26.741 -2.677 1.00 0.00 C ATOM 609 CE2 TYR 77 44.523 26.675 -0.325 1.00 0.00 C ATOM 610 CZ TYR 77 45.447 26.604 -1.354 1.00 0.00 C ATOM 611 OH TYR 77 46.775 26.399 -1.060 1.00 0.00 H ATOM 612 N THR 78 39.445 28.192 -4.996 1.00 0.00 N ATOM 613 CA THR 78 38.193 28.016 -5.491 1.00 0.00 C ATOM 614 C THR 78 38.069 26.695 -5.950 1.00 0.00 C ATOM 615 O THR 78 38.830 26.533 -6.903 1.00 0.00 O ATOM 616 CB THR 78 38.000 29.009 -6.624 1.00 0.00 C ATOM 617 OG1 THR 78 37.750 30.247 -5.963 1.00 0.00 O ATOM 618 CG2 THR 78 36.888 28.644 -7.596 1.00 0.00 C ATOM 619 N LEU 79 37.287 25.715 -5.490 1.00 0.00 N ATOM 620 CA LEU 79 37.729 24.348 -6.365 1.00 0.00 C ATOM 621 C LEU 79 36.485 24.044 -7.326 1.00 0.00 C ATOM 622 O LEU 79 35.351 24.382 -6.978 1.00 0.00 O ATOM 623 CB LEU 79 38.032 23.228 -5.356 1.00 0.00 C ATOM 624 CG LEU 79 39.160 23.451 -4.342 1.00 0.00 C ATOM 625 CD1 LEU 79 39.368 22.186 -3.540 1.00 0.00 C ATOM 626 CD2 LEU 79 40.453 23.857 -5.031 1.00 0.00 C ATOM 627 N GLU 80 36.706 23.372 -8.448 1.00 0.00 N ATOM 628 CA GLU 80 35.617 23.067 -9.254 1.00 0.00 C ATOM 629 C GLU 80 35.410 21.685 -8.758 1.00 0.00 C ATOM 630 O GLU 80 36.345 21.123 -8.192 1.00 0.00 O ATOM 631 CB GLU 80 35.992 23.228 -10.729 1.00 0.00 C ATOM 632 CG GLU 80 35.008 22.522 -11.666 1.00 0.00 C ATOM 633 CD GLU 80 35.315 22.753 -13.148 1.00 0.00 C ATOM 634 OE1 GLU 80 36.372 23.403 -13.494 1.00 0.00 O ATOM 635 OE2 GLU 80 34.514 22.295 -14.049 1.00 0.00 O ATOM 636 N ILE 81 34.197 21.145 -8.838 1.00 0.00 N ATOM 637 CA ILE 81 33.907 19.770 -8.466 1.00 0.00 C ATOM 638 C ILE 81 32.496 19.486 -9.127 1.00 0.00 C ATOM 639 O ILE 81 31.803 20.248 -9.807 1.00 0.00 O ATOM 640 CB ILE 81 33.878 19.580 -6.923 1.00 0.00 C ATOM 641 CG1 ILE 81 32.761 20.349 -6.230 1.00 0.00 C ATOM 642 CG2 ILE 81 35.224 19.996 -6.302 1.00 0.00 C ATOM 643 CD1 ILE 81 32.257 19.944 -4.878 1.00 0.00 C ATOM 644 N ASN 82 32.365 18.164 -9.152 1.00 0.00 N ATOM 645 CA ASN 82 31.254 17.305 -9.623 1.00 0.00 C ATOM 646 C ASN 82 30.034 18.196 -9.970 1.00 0.00 C ATOM 647 O ASN 82 30.172 19.397 -10.073 1.00 0.00 O ATOM 648 CB ASN 82 31.068 15.868 -9.148 1.00 0.00 C ATOM 649 CG ASN 82 32.270 15.006 -9.397 1.00 0.00 C ATOM 650 OD1 ASN 82 32.656 14.240 -8.528 1.00 0.00 O ATOM 651 ND2 ASN 82 32.866 15.118 -10.582 1.00 0.00 N ATOM 652 N GLY 83 28.893 17.619 -10.227 1.00 0.00 N ATOM 653 CA GLY 83 27.747 18.414 -10.568 1.00 0.00 C ATOM 654 C GLY 83 27.020 18.947 -9.362 1.00 0.00 C ATOM 655 O GLY 83 25.792 19.012 -9.313 1.00 0.00 O ATOM 656 N LYS 84 27.855 19.340 -8.401 1.00 0.00 N ATOM 657 CA LYS 84 27.244 20.097 -7.198 1.00 0.00 C ATOM 658 C LYS 84 27.466 18.843 -6.302 1.00 0.00 C ATOM 659 O LYS 84 26.885 17.848 -6.741 1.00 0.00 O ATOM 660 CB LYS 84 25.764 20.403 -6.921 1.00 0.00 C ATOM 661 CG LYS 84 25.126 21.402 -7.894 1.00 0.00 C ATOM 662 CD LYS 84 25.854 22.749 -7.847 1.00 0.00 C ATOM 663 CE LYS 84 25.243 23.801 -8.776 1.00 0.00 C ATOM 664 NZ LYS 84 25.967 25.126 -8.702 1.00 0.00 N ATOM 665 N SER 85 27.902 18.923 -5.051 1.00 0.00 N ATOM 666 CA SER 85 27.697 17.899 -4.132 1.00 0.00 C ATOM 667 C SER 85 28.291 18.109 -2.796 1.00 0.00 C ATOM 668 O SER 85 27.795 17.512 -1.838 1.00 0.00 O ATOM 669 CB SER 85 27.614 16.464 -4.468 1.00 0.00 C ATOM 670 OG SER 85 27.154 15.836 -3.287 1.00 0.00 O ATOM 671 N LEU 86 29.166 19.095 -2.634 1.00 0.00 N ATOM 672 CA LEU 86 29.723 19.573 -1.387 1.00 0.00 C ATOM 673 C LEU 86 28.728 20.098 -0.314 1.00 0.00 C ATOM 674 O LEU 86 28.648 19.607 0.795 1.00 0.00 O ATOM 675 CB LEU 86 30.851 20.615 -1.516 1.00 0.00 C ATOM 676 CG LEU 86 31.436 21.246 -0.207 1.00 0.00 C ATOM 677 CD1 LEU 86 31.984 20.081 0.625 1.00 0.00 C ATOM 678 CD2 LEU 86 32.492 22.281 -0.606 1.00 0.00 C ATOM 679 N LYS 87 27.956 21.098 -0.704 1.00 0.00 N ATOM 680 CA LYS 87 26.995 21.669 0.226 1.00 0.00 C ATOM 681 C LYS 87 25.956 20.605 0.751 1.00 0.00 C ATOM 682 O LYS 87 25.206 20.822 1.705 1.00 0.00 O ATOM 683 CB LYS 87 26.093 22.639 -0.540 1.00 0.00 C ATOM 684 CG LYS 87 25.423 23.573 0.397 1.00 0.00 C ATOM 685 CD LYS 87 26.499 24.106 1.325 1.00 0.00 C ATOM 686 CE LYS 87 25.900 24.804 2.536 1.00 0.00 C ATOM 687 NZ LYS 87 25.046 23.885 3.346 1.00 0.00 N ATOM 688 N LYS 88 25.922 19.484 0.035 1.00 0.00 N ATOM 689 CA LYS 88 25.050 18.408 0.360 1.00 0.00 C ATOM 690 C LYS 88 25.653 17.582 1.409 1.00 0.00 C ATOM 691 O LYS 88 24.921 17.129 2.281 1.00 0.00 O ATOM 692 CB LYS 88 24.554 17.532 -0.807 1.00 0.00 C ATOM 693 CG LYS 88 23.497 16.494 -0.435 1.00 0.00 C ATOM 694 CD LYS 88 23.250 15.455 -1.494 1.00 0.00 C ATOM 695 CE LYS 88 22.975 14.097 -0.885 1.00 0.00 C ATOM 696 NZ LYS 88 23.649 12.994 -1.583 1.00 0.00 N ATOM 697 N TYR 89 26.964 17.376 1.372 1.00 0.00 N ATOM 698 CA TYR 89 27.756 16.674 2.389 1.00 0.00 C ATOM 699 C TYR 89 27.653 17.273 3.732 1.00 0.00 C ATOM 700 O TYR 89 27.416 16.506 4.672 1.00 0.00 O ATOM 701 CB TYR 89 29.238 16.577 1.940 1.00 0.00 C ATOM 702 CG TYR 89 30.081 16.017 3.070 1.00 0.00 C ATOM 703 CD1 TYR 89 30.062 14.625 3.225 1.00 0.00 C ATOM 704 CD2 TYR 89 30.786 16.804 3.946 1.00 0.00 C ATOM 705 CE1 TYR 89 30.775 14.049 4.265 1.00 0.00 C ATOM 706 CE2 TYR 89 31.512 16.219 4.997 1.00 0.00 C ATOM 707 CZ TYR 89 31.488 14.851 5.124 1.00 0.00 C ATOM 708 OH TYR 89 32.177 14.203 6.145 1.00 0.00 H ATOM 709 N MET 90 27.811 18.588 3.893 1.00 0.00 N ATOM 710 CA MET 90 27.719 19.310 5.127 1.00 0.00 C ATOM 711 C MET 90 26.377 19.121 5.800 1.00 0.00 C ATOM 712 O MET 90 26.422 19.028 7.020 1.00 0.00 O ATOM 713 CB MET 90 27.953 20.805 4.975 1.00 0.00 C ATOM 714 CG MET 90 29.339 21.152 4.470 1.00 0.00 C ATOM 715 SD MET 90 29.424 22.931 4.077 1.00 0.00 S ATOM 716 CE MET 90 29.368 23.545 5.647 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 77.07 43.3 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 74.22 46.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 88.77 34.3 108 100.0 108 ARMSMC BURIED . . . . . . . . 54.27 57.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.61 45.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 85.61 45.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 89.52 46.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 91.26 36.4 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 84.70 58.1 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.72 60.0 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 66.04 60.9 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 64.55 61.5 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 71.44 51.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 58.94 72.7 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.65 41.7 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 74.65 41.7 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 69.69 41.2 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 71.63 50.0 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 83.06 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.31 38.5 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 77.31 38.5 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 88.05 20.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.63 36.4 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 63.07 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.58 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.58 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.1175 CRMSCA SECONDARY STRUCTURE . . 9.11 59 100.0 59 CRMSCA SURFACE . . . . . . . . 11.74 55 100.0 55 CRMSCA BURIED . . . . . . . . 8.43 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.47 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 9.17 293 100.0 293 CRMSMC SURFACE . . . . . . . . 11.62 269 100.0 269 CRMSMC BURIED . . . . . . . . 8.37 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.57 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 11.82 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 10.41 252 100.0 252 CRMSSC SURFACE . . . . . . . . 12.57 204 100.0 204 CRMSSC BURIED . . . . . . . . 10.09 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.02 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 9.79 488 100.0 488 CRMSALL SURFACE . . . . . . . . 12.06 424 100.0 424 CRMSALL BURIED . . . . . . . . 9.30 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.183 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 7.961 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 10.263 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 7.484 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.085 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 7.997 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 10.153 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 7.426 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.372 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 10.571 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 9.307 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 11.350 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 9.059 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.695 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 8.631 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 10.687 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 8.254 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 6 19 62 90 90 DISTCA CA (P) 0.00 2.22 6.67 21.11 68.89 90 DISTCA CA (RMS) 0.00 1.58 2.30 3.71 6.70 DISTCA ALL (N) 0 15 42 116 436 716 716 DISTALL ALL (P) 0.00 2.09 5.87 16.20 60.89 716 DISTALL ALL (RMS) 0.00 1.68 2.31 3.59 6.71 DISTALL END of the results output