####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS324_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS324_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.64 4.64 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 4 - 39 1.95 4.89 LONGEST_CONTINUOUS_SEGMENT: 36 5 - 40 2.00 4.92 LCS_AVERAGE: 33.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 16 - 38 0.99 5.15 LCS_AVERAGE: 12.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 11 90 0 3 7 28 42 54 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 2 T 2 3 11 90 3 5 16 30 42 54 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT D 3 D 3 4 21 90 3 4 16 32 42 56 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT L 4 L 4 4 36 90 3 4 9 25 42 56 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 5 V 5 7 36 90 4 16 38 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 6 A 6 7 36 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 7 V 7 7 36 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT W 8 W 8 7 36 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT D 9 D 9 7 36 90 8 21 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 10 V 10 7 36 90 7 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 11 A 11 7 36 90 4 16 36 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT L 12 L 12 6 36 90 4 5 9 15 40 50 58 69 72 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT S 13 S 13 6 36 90 4 5 8 12 16 22 53 61 67 72 75 79 83 85 86 87 87 87 87 87 LCS_GDT D 14 D 14 11 36 90 3 20 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 15 G 15 11 36 90 4 20 36 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 16 V 16 23 36 90 8 22 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT H 17 H 17 23 36 90 5 18 32 42 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 18 K 18 23 36 90 3 21 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 19 I 19 23 36 90 8 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 20 E 20 23 36 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT F 21 F 21 23 36 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 22 E 22 23 36 90 10 24 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT H 23 H 23 23 36 90 7 22 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 24 G 24 23 36 90 5 21 32 51 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 25 T 25 23 36 90 4 11 32 51 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 26 T 26 23 36 90 4 17 32 44 57 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT S 27 S 27 23 36 90 3 14 32 43 57 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 28 G 28 23 36 90 7 21 32 51 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 29 K 29 23 36 90 4 13 28 42 57 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT R 30 R 30 23 36 90 9 20 41 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 31 V 31 23 36 90 8 21 40 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 32 V 32 23 36 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT Y 33 Y 33 23 36 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 34 V 34 23 36 90 8 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT D 35 D 35 23 36 90 8 21 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 36 G 36 23 36 90 7 22 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 37 K 37 23 36 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 38 E 38 23 36 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 39 E 39 14 36 90 7 24 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 40 I 40 4 36 90 3 4 5 8 16 20 35 46 67 74 79 82 83 85 86 87 87 87 87 87 LCS_GDT R 41 R 41 4 29 90 3 4 4 10 16 26 36 51 68 74 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 42 K 42 4 29 90 3 4 4 5 33 48 62 66 71 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 43 E 43 4 7 90 3 4 8 12 20 35 39 50 55 69 77 80 83 85 86 87 87 87 87 87 LCS_GDT W 44 W 44 4 7 90 3 4 8 12 19 26 32 40 50 57 70 79 81 84 86 87 87 87 87 87 LCS_GDT M 45 M 45 4 7 90 3 4 8 12 21 35 40 49 54 68 77 80 82 85 86 87 87 87 87 87 LCS_GDT F 46 F 46 4 7 90 3 4 10 27 34 43 51 64 69 75 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 47 K 47 4 7 90 3 7 16 33 43 57 63 67 72 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT L 48 L 48 4 10 90 3 3 9 12 20 30 60 69 72 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 49 V 49 9 33 90 4 16 34 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 50 G 50 9 33 90 3 12 40 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 51 K 51 9 33 90 3 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 52 E 52 9 33 90 4 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 53 T 53 9 33 90 6 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT F 54 F 54 9 33 90 6 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT Y 55 Y 55 9 33 90 5 22 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT V 56 V 56 9 33 90 5 12 32 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 57 G 57 9 33 90 5 9 32 48 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 58 A 58 6 33 90 3 3 6 19 40 55 63 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 59 A 59 3 33 90 3 3 4 12 41 56 63 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 60 K 60 3 33 90 3 3 21 31 53 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 61 T 61 9 33 90 3 21 41 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 62 K 62 9 33 90 8 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 63 A 63 9 33 90 5 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 64 T 64 9 33 90 6 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 65 I 65 9 33 90 5 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT N 66 N 66 9 33 90 7 20 40 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 67 I 67 9 33 90 7 20 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT D 68 D 68 9 33 90 7 16 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 69 A 69 9 33 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 70 I 70 9 33 90 3 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT S 71 S 71 6 33 90 6 20 33 51 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 72 G 72 3 33 90 3 3 10 35 43 54 63 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT F 73 F 73 13 33 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT A 74 A 74 13 33 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT Y 75 Y 75 13 33 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 76 E 76 13 33 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT Y 77 Y 77 13 33 90 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT T 78 T 78 13 33 90 10 24 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT L 79 L 79 13 33 90 9 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT E 80 E 80 13 33 90 8 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT I 81 I 81 13 33 90 5 28 40 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT N 82 N 82 13 25 90 5 9 16 31 48 58 63 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT G 83 G 83 13 25 90 5 8 13 19 32 51 58 68 74 77 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 84 K 84 13 25 90 5 9 17 32 48 56 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT S 85 S 85 13 25 90 5 13 29 47 57 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT L 86 L 86 3 18 90 2 6 12 27 43 56 62 68 73 78 79 82 83 85 86 87 87 87 87 87 LCS_GDT K 87 K 87 3 10 90 1 3 4 6 8 18 29 30 38 58 64 75 82 85 86 87 87 87 87 87 LCS_GDT K 88 K 88 3 3 90 0 3 3 3 3 4 5 5 6 16 22 30 35 35 44 52 57 66 72 76 LCS_GDT Y 89 Y 89 3 3 90 0 3 3 3 3 4 5 8 8 9 9 19 19 25 30 32 41 45 51 64 LCS_GDT M 90 M 90 3 3 90 0 3 3 3 3 6 7 8 8 11 14 15 17 19 27 33 37 44 51 57 LCS_AVERAGE LCS_A: 48.79 ( 12.99 33.38 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 28 42 52 58 62 64 69 74 78 79 82 83 85 86 87 87 87 87 87 GDT PERCENT_AT 11.11 31.11 46.67 57.78 64.44 68.89 71.11 76.67 82.22 86.67 87.78 91.11 92.22 94.44 95.56 96.67 96.67 96.67 96.67 96.67 GDT RMS_LOCAL 0.33 0.77 1.05 1.22 1.43 1.61 1.70 2.07 2.30 2.53 2.58 2.82 2.91 3.17 3.25 3.36 3.36 3.36 3.36 3.36 GDT RMS_ALL_AT 4.86 5.07 4.94 4.91 4.90 4.90 4.87 4.83 4.86 4.79 4.80 4.76 4.76 4.72 4.74 4.71 4.71 4.71 4.71 4.71 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 55 Y 55 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 4.516 0 0.456 1.014 8.704 33.095 22.083 LGA T 2 T 2 4.066 0 0.640 0.615 6.421 45.238 33.810 LGA D 3 D 3 4.322 0 0.417 0.917 7.981 35.714 26.964 LGA L 4 L 4 4.305 0 0.045 0.860 10.086 47.857 26.250 LGA V 5 V 5 2.107 0 0.677 0.952 6.488 73.214 51.837 LGA A 6 A 6 0.539 0 0.042 0.053 0.933 92.857 94.286 LGA V 7 V 7 0.355 0 0.043 1.108 2.581 100.000 88.639 LGA W 8 W 8 0.650 0 0.044 0.103 1.009 90.476 90.510 LGA D 9 D 9 0.979 0 0.103 0.962 3.987 90.476 72.500 LGA V 10 V 10 0.346 0 0.081 1.190 2.355 92.976 87.075 LGA A 11 A 11 1.845 0 0.029 0.054 3.882 61.905 60.952 LGA L 12 L 12 4.942 0 0.096 0.178 5.747 29.405 29.107 LGA S 13 S 13 7.255 0 0.450 0.618 9.219 15.476 11.032 LGA D 14 D 14 1.380 0 0.198 1.182 3.982 75.357 62.857 LGA G 15 G 15 1.631 0 0.035 0.035 1.733 77.143 77.143 LGA V 16 V 16 1.120 0 0.110 1.130 3.230 73.214 71.020 LGA H 17 H 17 2.664 0 0.110 1.150 7.229 71.071 44.571 LGA K 18 K 18 1.378 0 0.120 0.610 3.452 79.286 65.450 LGA I 19 I 19 0.900 0 0.063 1.093 3.011 90.476 78.988 LGA E 20 E 20 0.923 0 0.100 0.198 1.709 85.952 83.492 LGA F 21 F 21 0.710 0 0.075 1.167 6.793 90.476 60.866 LGA E 22 E 22 0.833 0 0.109 0.297 1.780 90.476 87.513 LGA H 23 H 23 1.120 0 0.155 0.936 2.340 75.119 74.762 LGA G 24 G 24 2.213 0 0.140 0.140 2.213 70.833 70.833 LGA T 25 T 25 2.255 0 0.291 1.057 4.343 60.952 53.469 LGA T 26 T 26 3.173 0 0.065 0.918 5.871 51.786 43.333 LGA S 27 S 27 3.214 0 0.276 0.632 4.533 55.476 50.556 LGA G 28 G 28 2.204 0 0.245 0.245 2.760 62.857 62.857 LGA K 29 K 29 3.757 0 0.115 1.233 12.563 50.119 27.196 LGA R 30 R 30 1.208 0 0.102 1.339 5.857 73.095 57.619 LGA V 31 V 31 1.305 0 0.074 0.137 2.245 85.952 79.184 LGA V 32 V 32 0.800 0 0.055 1.061 3.664 90.476 79.932 LGA Y 33 Y 33 0.575 0 0.154 0.243 2.199 86.071 83.135 LGA V 34 V 34 0.571 0 0.035 0.059 1.008 92.857 90.544 LGA D 35 D 35 1.041 0 0.085 0.274 1.674 81.548 83.869 LGA G 36 G 36 0.935 0 0.078 0.078 0.935 90.476 90.476 LGA K 37 K 37 0.946 0 0.025 1.132 8.073 90.476 60.212 LGA E 38 E 38 0.923 0 0.109 0.301 1.522 83.810 84.497 LGA E 39 E 39 0.884 0 0.658 1.227 7.613 72.024 49.788 LGA I 40 I 40 6.262 0 0.609 0.573 10.366 18.214 10.119 LGA R 41 R 41 6.537 0 0.080 1.566 16.446 20.595 8.398 LGA K 42 K 42 5.288 0 0.061 0.940 9.576 18.690 19.577 LGA E 43 E 43 8.661 0 0.677 1.432 16.247 3.571 1.587 LGA W 44 W 44 9.375 0 0.070 0.455 13.187 3.571 1.463 LGA M 45 M 45 8.807 0 0.045 0.686 9.361 3.452 2.798 LGA F 46 F 46 7.294 0 0.612 0.630 9.715 7.976 6.147 LGA K 47 K 47 5.353 0 0.090 1.265 5.617 29.048 27.513 LGA L 48 L 48 5.624 0 0.080 1.027 11.731 29.048 15.952 LGA V 49 V 49 2.238 0 0.625 1.423 4.392 52.262 53.469 LGA G 50 G 50 2.805 0 0.247 0.247 2.805 66.905 66.905 LGA K 51 K 51 1.788 0 0.041 1.039 6.432 68.810 51.693 LGA E 52 E 52 1.405 0 0.029 1.098 4.932 81.429 67.460 LGA T 53 T 53 1.565 0 0.034 0.066 1.987 75.000 74.082 LGA F 54 F 54 1.455 0 0.048 0.135 1.478 81.429 81.429 LGA Y 55 Y 55 1.536 0 0.024 0.269 2.415 72.976 78.056 LGA V 56 V 56 2.213 0 0.064 1.070 4.383 64.762 61.973 LGA G 57 G 57 2.320 0 0.297 0.297 2.533 64.881 64.881 LGA A 58 A 58 4.361 0 0.652 0.604 6.332 32.262 30.095 LGA A 59 A 59 4.296 0 0.229 0.229 5.567 43.452 39.048 LGA K 60 K 60 4.032 0 0.422 0.856 13.206 46.786 24.868 LGA T 61 T 61 1.642 0 0.200 1.070 2.483 79.643 79.320 LGA K 62 K 62 1.144 0 0.115 0.626 3.155 79.286 72.328 LGA A 63 A 63 1.254 0 0.074 0.118 1.254 81.429 81.429 LGA T 64 T 64 0.957 0 0.101 1.115 2.268 88.214 81.701 LGA I 65 I 65 0.802 0 0.019 0.112 1.724 81.548 80.417 LGA N 66 N 66 1.908 0 0.086 0.738 3.889 75.000 62.679 LGA I 67 I 67 1.885 0 0.029 0.625 3.202 66.905 67.024 LGA D 68 D 68 2.415 0 0.106 0.898 4.894 64.762 52.798 LGA A 69 A 69 1.768 0 0.049 0.058 1.962 72.857 72.857 LGA I 70 I 70 1.603 0 0.296 1.146 4.385 72.976 69.524 LGA S 71 S 71 1.908 0 0.599 0.557 4.154 60.000 59.048 LGA G 72 G 72 4.578 0 0.102 0.102 4.578 47.143 47.143 LGA F 73 F 73 2.744 0 0.331 0.631 6.781 59.286 37.532 LGA A 74 A 74 2.050 0 0.020 0.036 2.113 64.762 64.762 LGA Y 75 Y 75 1.783 0 0.019 0.130 1.906 72.857 72.857 LGA E 76 E 76 1.788 0 0.061 0.262 1.807 72.857 76.720 LGA Y 77 Y 77 1.351 0 0.036 0.121 1.545 77.143 79.286 LGA T 78 T 78 1.487 0 0.170 1.097 2.884 85.952 76.939 LGA L 79 L 79 0.534 0 0.092 0.227 1.672 90.476 86.012 LGA E 80 E 80 0.874 0 0.063 0.605 2.982 85.952 74.497 LGA I 81 I 81 1.490 0 0.018 0.589 3.164 67.500 73.452 LGA N 82 N 82 4.211 0 0.130 0.182 6.025 33.929 37.857 LGA G 83 G 83 5.080 0 0.077 0.077 5.102 30.238 30.238 LGA K 84 K 84 4.270 0 0.031 0.660 8.693 47.262 30.212 LGA S 85 S 85 2.683 0 0.054 0.118 4.965 45.476 49.444 LGA L 86 L 86 4.831 0 0.615 1.121 7.565 24.762 27.024 LGA K 87 K 87 8.933 0 0.598 1.093 11.769 4.048 5.503 LGA K 88 K 88 15.500 0 0.600 1.434 19.300 0.000 0.000 LGA Y 89 Y 89 19.576 0 0.669 1.379 23.444 0.000 0.000 LGA M 90 M 90 20.805 0 0.462 1.276 22.164 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.636 4.677 5.659 60.372 54.504 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 69 2.07 65.556 60.977 3.183 LGA_LOCAL RMSD: 2.068 Number of atoms: 69 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.825 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.636 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.583730 * X + 0.636325 * Y + 0.504331 * Z + 31.916830 Y_new = 0.224841 * X + 0.723528 * Y + -0.652651 * Z + 16.393431 Z_new = -0.780196 * X + -0.267578 * Y + -0.565417 * Z + 1.623761 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.773926 0.894979 -2.699582 [DEG: 158.9343 51.2785 -154.6747 ] ZXZ: 0.657898 2.171735 -1.901188 [DEG: 37.6948 124.4313 -108.9300 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS324_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS324_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 69 2.07 60.977 4.64 REMARK ---------------------------------------------------------- MOLECULE T0540TS324_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 35.032 5.415 9.184 1.00 64.13 N ATOM 2 CA MET 1 34.736 6.731 8.569 1.00 64.13 C ATOM 3 CB MET 1 33.647 6.602 7.492 1.00 64.13 C ATOM 4 CG MET 1 34.041 5.759 6.279 1.00 64.13 C ATOM 5 SD MET 1 32.731 5.650 5.024 1.00 64.13 S ATOM 6 CE MET 1 33.580 4.410 4.008 1.00 64.13 C ATOM 7 C MET 1 34.234 7.692 9.600 1.00 64.13 C ATOM 8 O MET 1 34.035 7.331 10.758 1.00 64.13 O ATOM 9 N THR 2 34.033 8.958 9.185 1.00147.82 N ATOM 10 CA THR 2 33.574 10.010 10.046 1.00147.82 C ATOM 11 CB THR 2 34.279 11.312 9.796 1.00147.82 C ATOM 12 OG1 THR 2 34.015 11.767 8.478 1.00147.82 O ATOM 13 CG2 THR 2 35.790 11.095 9.976 1.00147.82 C ATOM 14 C THR 2 32.130 10.227 9.798 1.00147.82 C ATOM 15 O THR 2 31.472 9.433 9.131 1.00147.82 O ATOM 16 N ASP 3 31.592 11.324 10.359 1.00184.77 N ATOM 17 CA ASP 3 30.209 11.589 10.149 1.00184.77 C ATOM 18 CB ASP 3 29.774 12.895 10.841 1.00184.77 C ATOM 19 CG ASP 3 28.256 12.962 10.922 1.00184.77 C ATOM 20 OD1 ASP 3 27.582 12.235 10.146 1.00184.77 O ATOM 21 OD2 ASP 3 27.753 13.747 11.771 1.00184.77 O ATOM 22 C ASP 3 30.037 11.727 8.672 1.00184.77 C ATOM 23 O ASP 3 29.199 11.026 8.106 1.00184.77 O ATOM 24 N LEU 4 30.858 12.591 8.010 1.00254.43 N ATOM 25 CA LEU 4 30.752 12.813 6.594 1.00254.43 C ATOM 26 CB LEU 4 29.917 14.045 6.192 1.00254.43 C ATOM 27 CG LEU 4 28.391 13.834 6.235 1.00254.43 C ATOM 28 CD1 LEU 4 27.897 13.462 7.635 1.00254.43 C ATOM 29 CD2 LEU 4 27.652 15.054 5.669 1.00254.43 C ATOM 30 C LEU 4 32.085 12.986 5.942 1.00254.43 C ATOM 31 O LEU 4 32.944 13.739 6.401 1.00254.43 O ATOM 32 N VAL 5 32.261 12.276 4.811 1.00118.29 N ATOM 33 CA VAL 5 33.436 12.388 4.005 1.00118.29 C ATOM 34 CB VAL 5 34.060 11.061 3.681 1.00118.29 C ATOM 35 CG1 VAL 5 35.268 11.290 2.756 1.00118.29 C ATOM 36 CG2 VAL 5 34.405 10.345 4.997 1.00118.29 C ATOM 37 C VAL 5 32.976 12.988 2.708 1.00118.29 C ATOM 38 O VAL 5 32.005 12.513 2.120 1.00118.29 O ATOM 39 N ALA 6 33.653 14.058 2.233 1.00 96.45 N ATOM 40 CA ALA 6 33.243 14.685 1.001 1.00 96.45 C ATOM 41 CB ALA 6 32.727 16.123 1.173 1.00 96.45 C ATOM 42 C ALA 6 34.419 14.771 0.078 1.00 96.45 C ATOM 43 O ALA 6 35.546 15.014 0.508 1.00 96.45 O ATOM 44 N VAL 7 34.179 14.577 -1.237 1.00132.72 N ATOM 45 CA VAL 7 35.261 14.629 -2.180 1.00132.72 C ATOM 46 CB VAL 7 35.645 13.285 -2.720 1.00132.72 C ATOM 47 CG1 VAL 7 36.216 12.431 -1.578 1.00132.72 C ATOM 48 CG2 VAL 7 34.407 12.666 -3.391 1.00132.72 C ATOM 49 C VAL 7 34.838 15.436 -3.368 1.00132.72 C ATOM 50 O VAL 7 33.661 15.473 -3.721 1.00132.72 O ATOM 51 N TRP 8 35.803 16.128 -4.011 1.00189.78 N ATOM 52 CA TRP 8 35.480 16.861 -5.202 1.00189.78 C ATOM 53 CB TRP 8 35.423 18.388 -5.018 1.00189.78 C ATOM 54 CG TRP 8 34.272 18.847 -4.155 1.00189.78 C ATOM 55 CD2 TRP 8 34.378 19.148 -2.760 1.00189.78 C ATOM 56 CD1 TRP 8 32.973 19.070 -4.501 1.00189.78 C ATOM 57 NE1 TRP 8 32.255 19.469 -3.398 1.00189.78 N ATOM 58 CE2 TRP 8 33.111 19.527 -2.322 1.00189.78 C ATOM 59 CE3 TRP 8 35.445 19.113 -1.913 1.00189.78 C ATOM 60 CZ2 TRP 8 32.886 19.881 -1.023 1.00189.78 C ATOM 61 CZ3 TRP 8 35.214 19.466 -0.605 1.00189.78 C ATOM 62 CH2 TRP 8 33.964 19.841 -0.165 1.00189.78 C ATOM 63 C TRP 8 36.538 16.579 -6.226 1.00189.78 C ATOM 64 O TRP 8 37.721 16.489 -5.902 1.00189.78 O ATOM 65 N ASP 9 36.127 16.437 -7.504 1.00 63.81 N ATOM 66 CA ASP 9 37.063 16.153 -8.562 1.00 63.81 C ATOM 67 CB ASP 9 36.448 15.322 -9.704 1.00 63.81 C ATOM 68 CG ASP 9 37.536 14.970 -10.713 1.00 63.81 C ATOM 69 OD1 ASP 9 38.702 15.404 -10.508 1.00 63.81 O ATOM 70 OD2 ASP 9 37.213 14.268 -11.706 1.00 63.81 O ATOM 71 C ASP 9 37.491 17.464 -9.144 1.00 63.81 C ATOM 72 O ASP 9 36.742 18.086 -9.895 1.00 63.81 O ATOM 73 N VAL 10 38.720 17.918 -8.827 1.00138.33 N ATOM 74 CA VAL 10 39.134 19.210 -9.304 1.00138.33 C ATOM 75 CB VAL 10 39.009 20.259 -8.235 1.00138.33 C ATOM 76 CG1 VAL 10 39.947 19.885 -7.073 1.00138.33 C ATOM 77 CG2 VAL 10 39.284 21.642 -8.842 1.00138.33 C ATOM 78 C VAL 10 40.571 19.143 -9.730 1.00138.33 C ATOM 79 O VAL 10 41.341 18.330 -9.223 1.00138.33 O ATOM 80 N ALA 11 40.979 19.997 -10.695 1.00 76.69 N ATOM 81 CA ALA 11 42.356 19.979 -11.113 1.00 76.69 C ATOM 82 CB ALA 11 42.646 20.879 -12.329 1.00 76.69 C ATOM 83 C ALA 11 43.188 20.480 -9.969 1.00 76.69 C ATOM 84 O ALA 11 42.887 21.519 -9.385 1.00 76.69 O ATOM 85 N LEU 12 44.271 19.753 -9.622 1.00123.30 N ATOM 86 CA LEU 12 45.083 20.149 -8.511 1.00123.30 C ATOM 87 CB LEU 12 44.806 19.325 -7.242 1.00123.30 C ATOM 88 CG LEU 12 43.403 19.573 -6.655 1.00123.30 C ATOM 89 CD1 LEU 12 43.159 18.732 -5.392 1.00123.30 C ATOM 90 CD2 LEU 12 43.174 21.071 -6.410 1.00123.30 C ATOM 91 C LEU 12 46.533 19.976 -8.838 1.00123.30 C ATOM 92 O LEU 12 46.906 19.048 -9.554 1.00123.30 O ATOM 93 N SER 13 47.377 20.895 -8.314 1.00 61.69 N ATOM 94 CA SER 13 48.807 20.834 -8.458 1.00 61.69 C ATOM 95 CB SER 13 49.469 19.799 -7.533 1.00 61.69 C ATOM 96 OG SER 13 49.324 20.196 -6.177 1.00 61.69 O ATOM 97 C SER 13 49.176 20.529 -9.870 1.00 61.69 C ATOM 98 O SER 13 49.891 19.562 -10.130 1.00 61.69 O ATOM 99 N ASP 14 48.703 21.353 -10.821 1.00 49.51 N ATOM 100 CA ASP 14 49.028 21.124 -12.203 1.00 49.51 C ATOM 101 CB ASP 14 50.520 21.332 -12.516 1.00 49.51 C ATOM 102 CG ASP 14 50.832 22.819 -12.397 1.00 49.51 C ATOM 103 OD1 ASP 14 50.020 23.635 -12.909 1.00 49.51 O ATOM 104 OD2 ASP 14 51.889 23.159 -11.798 1.00 49.51 O ATOM 105 C ASP 14 48.660 19.722 -12.570 1.00 49.51 C ATOM 106 O ASP 14 49.451 19.003 -13.180 1.00 49.51 O ATOM 107 N GLY 15 47.437 19.293 -12.200 1.00 28.35 N ATOM 108 CA GLY 15 46.999 17.966 -12.533 1.00 28.35 C ATOM 109 C GLY 15 45.544 17.885 -12.200 1.00 28.35 C ATOM 110 O GLY 15 44.883 18.903 -12.016 1.00 28.35 O ATOM 111 N VAL 16 44.988 16.655 -12.151 1.00 53.78 N ATOM 112 CA VAL 16 43.608 16.501 -11.796 1.00 53.78 C ATOM 113 CB VAL 16 42.773 15.930 -12.903 1.00 53.78 C ATOM 114 CG1 VAL 16 41.322 15.819 -12.409 1.00 53.78 C ATOM 115 CG2 VAL 16 42.958 16.792 -14.168 1.00 53.78 C ATOM 116 C VAL 16 43.544 15.525 -10.657 1.00 53.78 C ATOM 117 O VAL 16 44.070 14.420 -10.762 1.00 53.78 O ATOM 118 N HIS 17 42.884 15.900 -9.536 1.00 72.24 N ATOM 119 CA HIS 17 42.827 14.999 -8.410 1.00 72.24 C ATOM 120 ND1 HIS 17 45.758 13.367 -8.211 1.00 72.24 N ATOM 121 CG HIS 17 45.328 14.675 -8.162 1.00 72.24 C ATOM 122 CB HIS 17 44.056 15.110 -7.497 1.00 72.24 C ATOM 123 NE2 HIS 17 47.291 14.578 -9.273 1.00 72.24 N ATOM 124 CD2 HIS 17 46.276 15.400 -8.816 1.00 72.24 C ATOM 125 CE1 HIS 17 46.935 13.366 -8.885 1.00 72.24 C ATOM 126 C HIS 17 41.615 15.316 -7.574 1.00 72.24 C ATOM 127 O HIS 17 40.828 16.191 -7.925 1.00 72.24 O ATOM 128 N LYS 18 41.429 14.584 -6.446 1.00 81.59 N ATOM 129 CA LYS 18 40.294 14.784 -5.576 1.00 81.59 C ATOM 130 CB LYS 18 39.406 13.535 -5.419 1.00 81.59 C ATOM 131 CG LYS 18 38.688 13.115 -6.703 1.00 81.59 C ATOM 132 CD LYS 18 38.074 11.714 -6.634 1.00 81.59 C ATOM 133 CE LYS 18 37.319 11.313 -7.904 1.00 81.59 C ATOM 134 NZ LYS 18 36.119 12.164 -8.072 1.00 81.59 N ATOM 135 C LYS 18 40.784 15.132 -4.202 1.00 81.59 C ATOM 136 O LYS 18 41.913 14.812 -3.827 1.00 81.59 O ATOM 137 N ILE 19 39.927 15.824 -3.416 1.00179.46 N ATOM 138 CA ILE 19 40.281 16.205 -2.080 1.00179.46 C ATOM 139 CB ILE 19 40.283 17.698 -1.883 1.00179.46 C ATOM 140 CG2 ILE 19 41.415 18.290 -2.735 1.00179.46 C ATOM 141 CG1 ILE 19 38.913 18.305 -2.202 1.00179.46 C ATOM 142 CD1 ILE 19 38.870 19.814 -1.961 1.00179.46 C ATOM 143 C ILE 19 39.340 15.542 -1.124 1.00179.46 C ATOM 144 O ILE 19 38.123 15.707 -1.194 1.00179.46 O ATOM 145 N GLU 20 39.908 14.757 -0.190 1.00 88.80 N ATOM 146 CA GLU 20 39.089 14.035 0.732 1.00 88.80 C ATOM 147 CB GLU 20 39.673 12.666 1.125 1.00 88.80 C ATOM 148 CG GLU 20 39.659 11.656 -0.025 1.00 88.80 C ATOM 149 CD GLU 20 40.301 10.371 0.474 1.00 88.80 C ATOM 150 OE1 GLU 20 41.482 10.438 0.908 1.00 88.80 O ATOM 151 OE2 GLU 20 39.623 9.309 0.435 1.00 88.80 O ATOM 152 C GLU 20 38.956 14.851 1.970 1.00 88.80 C ATOM 153 O GLU 20 39.933 15.163 2.646 1.00 88.80 O ATOM 154 N PHE 21 37.716 15.242 2.294 1.00425.38 N ATOM 155 CA PHE 21 37.528 15.974 3.503 1.00425.38 C ATOM 156 CB PHE 21 36.531 17.141 3.424 1.00425.38 C ATOM 157 CG PHE 21 37.232 18.257 2.754 1.00425.38 C ATOM 158 CD1 PHE 21 37.991 19.131 3.492 1.00425.38 C ATOM 159 CD2 PHE 21 37.147 18.422 1.393 1.00425.38 C ATOM 160 CE1 PHE 21 38.652 20.162 2.874 1.00425.38 C ATOM 161 CE2 PHE 21 37.809 19.459 0.774 1.00425.38 C ATOM 162 CZ PHE 21 38.565 20.331 1.512 1.00425.38 C ATOM 163 C PHE 21 36.951 15.040 4.494 1.00425.38 C ATOM 164 O PHE 21 36.015 14.301 4.195 1.00425.38 O ATOM 165 N GLU 22 37.532 15.045 5.702 1.00174.78 N ATOM 166 CA GLU 22 36.996 14.248 6.753 1.00174.78 C ATOM 167 CB GLU 22 38.046 13.452 7.541 1.00174.78 C ATOM 168 CG GLU 22 38.650 12.276 6.779 1.00174.78 C ATOM 169 CD GLU 22 39.591 11.575 7.745 1.00174.78 C ATOM 170 OE1 GLU 22 40.501 12.260 8.285 1.00174.78 O ATOM 171 OE2 GLU 22 39.406 10.349 7.969 1.00174.78 O ATOM 172 C GLU 22 36.408 15.211 7.708 1.00174.78 C ATOM 173 O GLU 22 37.117 15.978 8.354 1.00174.78 O ATOM 174 N HIS 23 35.075 15.196 7.797 1.00446.39 N ATOM 175 CA HIS 23 34.381 16.049 8.701 1.00446.39 C ATOM 176 ND1 HIS 23 31.412 17.103 10.107 1.00446.39 N ATOM 177 CG HIS 23 32.092 17.179 8.914 1.00446.39 C ATOM 178 CB HIS 23 32.890 16.065 8.332 1.00446.39 C ATOM 179 NE2 HIS 23 31.015 19.124 9.273 1.00446.39 N ATOM 180 CD2 HIS 23 31.840 18.419 8.417 1.00446.39 C ATOM 181 CE1 HIS 23 30.784 18.294 10.271 1.00446.39 C ATOM 182 C HIS 23 34.551 15.376 10.024 1.00446.39 C ATOM 183 O HIS 23 34.699 14.160 10.070 1.00446.39 O ATOM 184 N GLY 24 34.575 16.131 11.135 1.00232.72 N ATOM 185 CA GLY 24 34.747 15.476 12.402 1.00232.72 C ATOM 186 C GLY 24 33.488 15.671 13.191 1.00232.72 C ATOM 187 O GLY 24 32.858 16.724 13.114 1.00232.72 O ATOM 188 N THR 25 33.013 14.624 13.896 1.00361.57 N ATOM 189 CA THR 25 31.820 14.842 14.662 1.00361.57 C ATOM 190 CB THR 25 31.171 13.554 15.069 1.00361.57 C ATOM 191 OG1 THR 25 30.871 12.774 13.920 1.00361.57 O ATOM 192 CG2 THR 25 29.881 13.885 15.827 1.00361.57 C ATOM 193 C THR 25 32.109 15.596 15.902 1.00361.57 C ATOM 194 O THR 25 31.718 16.750 16.091 1.00361.57 O ATOM 195 N THR 26 32.830 14.896 16.789 1.00182.10 N ATOM 196 CA THR 26 33.158 15.405 18.072 1.00182.10 C ATOM 197 CB THR 26 33.438 14.303 19.054 1.00182.10 C ATOM 198 OG1 THR 26 33.594 14.843 20.356 1.00182.10 O ATOM 199 CG2 THR 26 34.709 13.553 18.623 1.00182.10 C ATOM 200 C THR 26 34.345 16.302 18.035 1.00182.10 C ATOM 201 O THR 26 34.379 17.323 18.721 1.00182.10 O ATOM 202 N SER 27 35.350 15.922 17.225 1.00217.57 N ATOM 203 CA SER 27 36.596 16.622 17.233 1.00217.57 C ATOM 204 CB SER 27 37.583 16.073 16.191 1.00217.57 C ATOM 205 OG SER 27 38.797 16.812 16.234 1.00217.57 O ATOM 206 C SER 27 36.322 18.037 16.906 1.00217.57 C ATOM 207 O SER 27 36.551 18.935 17.710 1.00217.57 O ATOM 208 N GLY 28 35.774 18.265 15.710 1.00118.32 N ATOM 209 CA GLY 28 35.474 19.585 15.279 1.00118.32 C ATOM 210 C GLY 28 36.573 19.990 14.349 1.00118.32 C ATOM 211 O GLY 28 36.320 20.669 13.359 1.00118.32 O ATOM 212 N LYS 29 37.827 19.555 14.593 1.00223.74 N ATOM 213 CA LYS 29 38.856 20.003 13.695 1.00223.74 C ATOM 214 CB LYS 29 40.297 19.873 14.215 1.00223.74 C ATOM 215 CG LYS 29 40.751 21.026 15.105 1.00223.74 C ATOM 216 CD LYS 29 40.048 21.074 16.457 1.00223.74 C ATOM 217 CE LYS 29 40.492 22.244 17.339 1.00223.74 C ATOM 218 NZ LYS 29 39.709 22.260 18.595 1.00223.74 N ATOM 219 C LYS 29 38.801 19.162 12.468 1.00223.74 C ATOM 220 O LYS 29 39.115 17.973 12.508 1.00223.74 O ATOM 221 N ARG 30 38.436 19.785 11.336 1.00210.21 N ATOM 222 CA ARG 30 38.307 19.096 10.092 1.00210.21 C ATOM 223 CB ARG 30 37.398 19.819 9.082 1.00210.21 C ATOM 224 CG ARG 30 36.015 20.185 9.627 1.00210.21 C ATOM 225 CD ARG 30 35.048 19.018 9.794 1.00210.21 C ATOM 226 NE ARG 30 33.757 19.598 10.255 1.00210.21 N ATOM 227 CZ ARG 30 33.459 19.678 11.587 1.00210.21 C ATOM 228 NH1 ARG 30 34.307 19.146 12.512 1.00210.21 N ATOM 229 NH2 ARG 30 32.301 20.279 11.987 1.00210.21 N ATOM 230 C ARG 30 39.666 19.015 9.487 1.00210.21 C ATOM 231 O ARG 30 40.527 19.849 9.760 1.00210.21 O ATOM 232 N VAL 31 39.900 17.980 8.660 1.00102.70 N ATOM 233 CA VAL 31 41.182 17.829 8.043 1.00102.70 C ATOM 234 CB VAL 31 41.914 16.605 8.516 1.00102.70 C ATOM 235 CG1 VAL 31 43.231 16.474 7.748 1.00102.70 C ATOM 236 CG2 VAL 31 42.105 16.695 10.030 1.00102.70 C ATOM 237 C VAL 31 40.955 17.635 6.582 1.00102.70 C ATOM 238 O VAL 31 40.029 16.937 6.172 1.00102.70 O ATOM 239 N VAL 32 41.808 18.255 5.747 1.00133.88 N ATOM 240 CA VAL 32 41.641 18.079 4.338 1.00133.88 C ATOM 241 CB VAL 32 41.672 19.362 3.558 1.00133.88 C ATOM 242 CG1 VAL 32 43.065 20.000 3.683 1.00133.88 C ATOM 243 CG2 VAL 32 41.280 19.048 2.108 1.00133.88 C ATOM 244 C VAL 32 42.774 17.239 3.847 1.00133.88 C ATOM 245 O VAL 32 43.931 17.450 4.212 1.00133.88 O ATOM 246 N TYR 33 42.455 16.228 3.019 1.00 87.19 N ATOM 247 CA TYR 33 43.498 15.432 2.449 1.00 87.19 C ATOM 248 CB TYR 33 43.321 13.916 2.633 1.00 87.19 C ATOM 249 CG TYR 33 43.540 13.580 4.065 1.00 87.19 C ATOM 250 CD1 TYR 33 42.504 13.640 4.967 1.00 87.19 C ATOM 251 CD2 TYR 33 44.788 13.200 4.501 1.00 87.19 C ATOM 252 CE1 TYR 33 42.714 13.325 6.289 1.00 87.19 C ATOM 253 CE2 TYR 33 45.003 12.884 5.821 1.00 87.19 C ATOM 254 CZ TYR 33 43.964 12.948 6.716 1.00 87.19 C ATOM 255 OH TYR 33 44.179 12.625 8.072 1.00 87.19 O ATOM 256 C TYR 33 43.469 15.685 0.984 1.00 87.19 C ATOM 257 O TYR 33 42.608 15.177 0.270 1.00 87.19 O ATOM 258 N VAL 34 44.432 16.478 0.488 1.00 83.40 N ATOM 259 CA VAL 34 44.421 16.740 -0.914 1.00 83.40 C ATOM 260 CB VAL 34 45.062 18.045 -1.279 1.00 83.40 C ATOM 261 CG1 VAL 34 45.060 18.182 -2.811 1.00 83.40 C ATOM 262 CG2 VAL 34 44.319 19.176 -0.546 1.00 83.40 C ATOM 263 C VAL 34 45.217 15.653 -1.562 1.00 83.40 C ATOM 264 O VAL 34 46.388 15.448 -1.245 1.00 83.40 O ATOM 265 N ASP 35 44.598 14.930 -2.510 1.00 80.98 N ATOM 266 CA ASP 35 45.281 13.861 -3.178 1.00 80.98 C ATOM 267 CB ASP 35 46.622 14.287 -3.814 1.00 80.98 C ATOM 268 CG ASP 35 46.373 15.302 -4.914 1.00 80.98 C ATOM 269 OD1 ASP 35 45.197 15.714 -5.082 1.00 80.98 O ATOM 270 OD2 ASP 35 47.362 15.682 -5.600 1.00 80.98 O ATOM 271 C ASP 35 45.650 12.840 -2.152 1.00 80.98 C ATOM 272 O ASP 35 46.560 12.044 -2.374 1.00 80.98 O ATOM 273 N GLY 36 44.940 12.817 -1.008 1.00 27.44 N ATOM 274 CA GLY 36 45.236 11.845 0.005 1.00 27.44 C ATOM 275 C GLY 36 46.348 12.373 0.854 1.00 27.44 C ATOM 276 O GLY 36 46.793 11.699 1.781 1.00 27.44 O ATOM 277 N LYS 37 46.826 13.602 0.568 1.00 80.47 N ATOM 278 CA LYS 37 47.911 14.113 1.351 1.00 80.47 C ATOM 279 CB LYS 37 49.061 14.685 0.505 1.00 80.47 C ATOM 280 CG LYS 37 49.726 13.592 -0.336 1.00 80.47 C ATOM 281 CD LYS 37 50.696 14.109 -1.396 1.00 80.47 C ATOM 282 CE LYS 37 51.184 13.015 -2.346 1.00 80.47 C ATOM 283 NZ LYS 37 51.772 11.895 -1.577 1.00 80.47 N ATOM 284 C LYS 37 47.382 15.165 2.261 1.00 80.47 C ATOM 285 O LYS 37 46.731 16.122 1.843 1.00 80.47 O ATOM 286 N GLU 38 47.676 15.000 3.563 1.00 65.99 N ATOM 287 CA GLU 38 47.143 15.890 4.542 1.00 65.99 C ATOM 288 CB GLU 38 47.292 15.403 5.996 1.00 65.99 C ATOM 289 CG GLU 38 46.670 16.372 7.005 1.00 65.99 C ATOM 290 CD GLU 38 46.851 15.828 8.416 1.00 65.99 C ATOM 291 OE1 GLU 38 47.975 15.952 8.968 1.00 65.99 O ATOM 292 OE2 GLU 38 45.855 15.283 8.963 1.00 65.99 O ATOM 293 C GLU 38 47.795 17.225 4.432 1.00 65.99 C ATOM 294 O GLU 38 48.968 17.364 4.084 1.00 65.99 O ATOM 295 N GLU 39 46.996 18.252 4.756 1.00150.20 N ATOM 296 CA GLU 39 47.381 19.626 4.751 1.00150.20 C ATOM 297 CB GLU 39 46.219 20.521 5.207 1.00150.20 C ATOM 298 CG GLU 39 45.713 20.102 6.595 1.00150.20 C ATOM 299 CD GLU 39 44.424 20.844 6.922 1.00150.20 C ATOM 300 OE1 GLU 39 44.440 22.103 6.918 1.00150.20 O ATOM 301 OE2 GLU 39 43.405 20.151 7.184 1.00150.20 O ATOM 302 C GLU 39 48.480 19.773 5.754 1.00150.20 C ATOM 303 O GLU 39 48.640 18.948 6.652 1.00150.20 O ATOM 304 N ILE 40 49.303 20.825 5.589 1.00 43.53 N ATOM 305 CA ILE 40 50.413 21.034 6.469 1.00 43.53 C ATOM 306 CB ILE 40 51.252 22.212 6.075 1.00 43.53 C ATOM 307 CG2 ILE 40 52.279 22.456 7.196 1.00 43.53 C ATOM 308 CG1 ILE 40 51.881 21.995 4.691 1.00 43.53 C ATOM 309 CD1 ILE 40 52.503 23.263 4.106 1.00 43.53 C ATOM 310 C ILE 40 49.932 21.305 7.862 1.00 43.53 C ATOM 311 O ILE 40 50.424 20.695 8.812 1.00 43.53 O ATOM 312 N ARG 41 48.954 22.219 8.034 1.00106.58 N ATOM 313 CA ARG 41 48.570 22.530 9.382 1.00106.58 C ATOM 314 CB ARG 41 48.955 23.959 9.797 1.00106.58 C ATOM 315 CG ARG 41 48.603 24.304 11.244 1.00106.58 C ATOM 316 CD ARG 41 49.286 25.579 11.736 1.00106.58 C ATOM 317 NE ARG 41 48.475 26.753 11.303 1.00106.58 N ATOM 318 CZ ARG 41 48.726 27.376 10.114 1.00106.58 C ATOM 319 NH1 ARG 41 49.637 26.857 9.242 1.00106.58 N ATOM 320 NH2 ARG 41 48.075 28.537 9.812 1.00106.58 N ATOM 321 C ARG 41 47.089 22.406 9.527 1.00106.58 C ATOM 322 O ARG 41 46.322 23.158 8.926 1.00106.58 O ATOM 323 N LYS 42 46.660 21.458 10.379 1.00104.64 N ATOM 324 CA LYS 42 45.268 21.231 10.624 1.00104.64 C ATOM 325 CB LYS 42 45.015 19.954 11.445 1.00104.64 C ATOM 326 CG LYS 42 43.539 19.676 11.737 1.00104.64 C ATOM 327 CD LYS 42 43.271 18.254 12.232 1.00104.64 C ATOM 328 CE LYS 42 43.786 17.948 13.635 1.00104.64 C ATOM 329 NZ LYS 42 43.480 16.537 13.970 1.00104.64 N ATOM 330 C LYS 42 44.723 22.385 11.413 1.00104.64 C ATOM 331 O LYS 42 45.293 22.780 12.427 1.00104.64 O ATOM 332 N GLU 43 43.591 22.962 10.956 1.00 84.44 N ATOM 333 CA GLU 43 42.969 24.059 11.658 1.00 84.44 C ATOM 334 CB GLU 43 43.469 25.444 11.215 1.00 84.44 C ATOM 335 CG GLU 43 44.945 25.719 11.498 1.00 84.44 C ATOM 336 CD GLU 43 45.265 27.098 10.935 1.00 84.44 C ATOM 337 OE1 GLU 43 45.103 28.098 11.682 1.00 84.44 O ATOM 338 OE2 GLU 43 45.672 27.166 9.744 1.00 84.44 O ATOM 339 C GLU 43 41.514 24.039 11.297 1.00 84.44 C ATOM 340 O GLU 43 41.145 23.467 10.273 1.00 84.44 O ATOM 341 N TRP 44 40.640 24.648 12.134 1.00158.24 N ATOM 342 CA TRP 44 39.250 24.651 11.766 1.00158.24 C ATOM 343 CB TRP 44 38.521 23.347 12.153 1.00158.24 C ATOM 344 CG TRP 44 37.101 23.249 11.646 1.00158.24 C ATOM 345 CD2 TRP 44 35.914 23.232 12.463 1.00158.24 C ATOM 346 CD1 TRP 44 36.677 23.126 10.358 1.00158.24 C ATOM 347 NE1 TRP 44 35.305 23.043 10.313 1.00158.24 N ATOM 348 CE2 TRP 44 34.822 23.104 11.602 1.00158.24 C ATOM 349 CE3 TRP 44 35.745 23.313 13.817 1.00158.24 C ATOM 350 CZ2 TRP 44 33.541 23.055 12.078 1.00158.24 C ATOM 351 CZ3 TRP 44 34.451 23.270 14.293 1.00158.24 C ATOM 352 CH2 TRP 44 33.371 23.143 13.442 1.00158.24 C ATOM 353 C TRP 44 38.545 25.801 12.429 1.00158.24 C ATOM 354 O TRP 44 38.895 26.213 13.533 1.00158.24 O ATOM 355 N MET 45 37.517 26.351 11.748 1.00154.41 N ATOM 356 CA MET 45 36.746 27.449 12.263 1.00154.41 C ATOM 357 CB MET 45 36.020 28.248 11.163 1.00154.41 C ATOM 358 CG MET 45 36.949 28.966 10.179 1.00154.41 C ATOM 359 SD MET 45 37.748 30.470 10.818 1.00154.41 S ATOM 360 CE MET 45 36.340 31.578 10.511 1.00154.41 C ATOM 361 C MET 45 35.685 26.888 13.157 1.00154.41 C ATOM 362 O MET 45 35.133 25.826 12.896 1.00154.41 O ATOM 363 N PHE 46 35.364 27.587 14.257 1.00108.54 N ATOM 364 CA PHE 46 34.331 27.067 15.103 1.00108.54 C ATOM 365 CB PHE 46 34.658 27.242 16.594 1.00108.54 C ATOM 366 CG PHE 46 35.898 26.454 16.842 1.00108.54 C ATOM 367 CD1 PHE 46 37.136 26.987 16.553 1.00108.54 C ATOM 368 CD2 PHE 46 35.824 25.182 17.357 1.00108.54 C ATOM 369 CE1 PHE 46 38.282 26.263 16.778 1.00108.54 C ATOM 370 CE2 PHE 46 36.968 24.453 17.584 1.00108.54 C ATOM 371 CZ PHE 46 38.199 24.994 17.294 1.00108.54 C ATOM 372 C PHE 46 33.092 27.855 14.802 1.00108.54 C ATOM 373 O PHE 46 32.967 29.007 15.217 1.00108.54 O ATOM 374 N LYS 47 32.130 27.243 14.079 1.00116.06 N ATOM 375 CA LYS 47 30.940 27.960 13.704 1.00116.06 C ATOM 376 CB LYS 47 30.860 28.270 12.197 1.00116.06 C ATOM 377 CG LYS 47 32.010 29.116 11.642 1.00116.06 C ATOM 378 CD LYS 47 32.113 30.522 12.235 1.00116.06 C ATOM 379 CE LYS 47 33.263 31.343 11.647 1.00116.06 C ATOM 380 NZ LYS 47 33.329 32.659 12.318 1.00116.06 N ATOM 381 C LYS 47 29.766 27.084 14.004 1.00116.06 C ATOM 382 O LYS 47 29.911 25.901 14.302 1.00116.06 O ATOM 383 N LEU 48 28.549 27.658 13.949 1.00 95.66 N ATOM 384 CA LEU 48 27.386 26.871 14.229 1.00 95.66 C ATOM 385 CB LEU 48 26.081 27.685 14.152 1.00 95.66 C ATOM 386 CG LEU 48 26.024 28.866 15.137 1.00 95.66 C ATOM 387 CD1 LEU 48 27.083 29.924 14.792 1.00 95.66 C ATOM 388 CD2 LEU 48 24.605 29.452 15.229 1.00 95.66 C ATOM 389 C LEU 48 27.305 25.802 13.179 1.00 95.66 C ATOM 390 O LEU 48 27.108 24.626 13.488 1.00 95.66 O ATOM 391 N VAL 49 27.408 26.206 11.897 1.00105.37 N ATOM 392 CA VAL 49 27.370 25.273 10.803 1.00105.37 C ATOM 393 CB VAL 49 26.963 25.882 9.501 1.00105.37 C ATOM 394 CG1 VAL 49 26.978 24.748 8.471 1.00105.37 C ATOM 395 CG2 VAL 49 25.587 26.546 9.654 1.00105.37 C ATOM 396 C VAL 49 28.697 24.604 10.603 1.00105.37 C ATOM 397 O VAL 49 28.755 23.440 10.210 1.00105.37 O ATOM 398 N GLY 50 29.814 25.341 10.826 1.00 98.88 N ATOM 399 CA GLY 50 31.135 24.797 10.646 1.00 98.88 C ATOM 400 C GLY 50 31.727 25.398 9.403 1.00 98.88 C ATOM 401 O GLY 50 31.024 25.658 8.431 1.00 98.88 O ATOM 402 N LYS 51 33.051 25.664 9.412 1.00156.05 N ATOM 403 CA LYS 51 33.709 26.184 8.248 1.00156.05 C ATOM 404 CB LYS 51 33.734 27.719 8.141 1.00156.05 C ATOM 405 CG LYS 51 32.390 28.366 7.812 1.00156.05 C ATOM 406 CD LYS 51 32.436 29.895 7.860 1.00156.05 C ATOM 407 CE LYS 51 31.106 30.570 7.514 1.00156.05 C ATOM 408 NZ LYS 51 30.708 30.230 6.131 1.00156.05 N ATOM 409 C LYS 51 35.142 25.778 8.315 1.00156.05 C ATOM 410 O LYS 51 35.668 25.493 9.390 1.00156.05 O ATOM 411 N GLU 52 35.809 25.725 7.148 1.00118.28 N ATOM 412 CA GLU 52 37.201 25.402 7.181 1.00118.28 C ATOM 413 CB GLU 52 37.508 23.919 6.915 1.00118.28 C ATOM 414 CG GLU 52 38.945 23.536 7.269 1.00118.28 C ATOM 415 CD GLU 52 39.093 22.039 7.051 1.00118.28 C ATOM 416 OE1 GLU 52 38.088 21.404 6.633 1.00118.28 O ATOM 417 OE2 GLU 52 40.207 21.511 7.303 1.00118.28 O ATOM 418 C GLU 52 37.898 26.221 6.141 1.00118.28 C ATOM 419 O GLU 52 37.345 26.491 5.075 1.00118.28 O ATOM 420 N THR 53 39.140 26.660 6.446 1.00 69.92 N ATOM 421 CA THR 53 39.922 27.422 5.512 1.00 69.92 C ATOM 422 CB THR 53 40.222 28.812 5.997 1.00 69.92 C ATOM 423 OG1 THR 53 39.013 29.517 6.241 1.00 69.92 O ATOM 424 CG2 THR 53 41.055 29.543 4.932 1.00 69.92 C ATOM 425 C THR 53 41.235 26.709 5.328 1.00 69.92 C ATOM 426 O THR 53 41.872 26.318 6.305 1.00 69.92 O ATOM 427 N PHE 54 41.675 26.520 4.061 1.00123.54 N ATOM 428 CA PHE 54 42.894 25.796 3.806 1.00123.54 C ATOM 429 CB PHE 54 42.712 24.279 3.988 1.00123.54 C ATOM 430 CG PHE 54 41.554 23.884 3.137 1.00123.54 C ATOM 431 CD1 PHE 54 41.721 23.507 1.828 1.00123.54 C ATOM 432 CD2 PHE 54 40.283 23.903 3.661 1.00123.54 C ATOM 433 CE1 PHE 54 40.632 23.153 1.069 1.00123.54 C ATOM 434 CE2 PHE 54 39.192 23.551 2.902 1.00123.54 C ATOM 435 CZ PHE 54 39.365 23.174 1.595 1.00123.54 C ATOM 436 C PHE 54 43.358 26.057 2.398 1.00123.54 C ATOM 437 O PHE 54 42.790 26.884 1.690 1.00123.54 O ATOM 438 N TYR 55 44.444 25.372 1.965 1.00106.99 N ATOM 439 CA TYR 55 44.960 25.528 0.632 1.00106.99 C ATOM 440 CB TYR 55 46.447 25.910 0.556 1.00106.99 C ATOM 441 CG TYR 55 46.632 27.326 0.977 1.00106.99 C ATOM 442 CD1 TYR 55 46.625 27.681 2.307 1.00106.99 C ATOM 443 CD2 TYR 55 46.829 28.304 0.029 1.00106.99 C ATOM 444 CE1 TYR 55 46.810 28.989 2.688 1.00106.99 C ATOM 445 CE2 TYR 55 47.015 29.612 0.402 1.00106.99 C ATOM 446 CZ TYR 55 47.003 29.957 1.732 1.00106.99 C ATOM 447 OH TYR 55 47.193 31.300 2.114 1.00106.99 O ATOM 448 C TYR 55 44.839 24.213 -0.059 1.00106.99 C ATOM 449 O TYR 55 45.162 23.161 0.491 1.00106.99 O ATOM 450 N VAL 56 44.345 24.239 -1.307 1.00200.96 N ATOM 451 CA VAL 56 44.224 23.006 -2.012 1.00200.96 C ATOM 452 CB VAL 56 42.862 22.748 -2.586 1.00200.96 C ATOM 453 CG1 VAL 56 41.905 22.382 -1.460 1.00200.96 C ATOM 454 CG2 VAL 56 42.421 24.003 -3.349 1.00200.96 C ATOM 455 C VAL 56 45.129 23.015 -3.173 1.00200.96 C ATOM 456 O VAL 56 45.116 23.953 -3.959 1.00200.96 O ATOM 457 N GLY 57 45.941 21.956 -3.299 1.00112.01 N ATOM 458 CA GLY 57 46.756 21.783 -4.457 1.00112.01 C ATOM 459 C GLY 57 47.572 22.995 -4.710 1.00112.01 C ATOM 460 O GLY 57 48.626 23.158 -4.112 1.00112.01 O ATOM 461 N ALA 58 47.143 23.850 -5.659 1.00117.21 N ATOM 462 CA ALA 58 47.917 25.032 -5.929 1.00117.21 C ATOM 463 CB ALA 58 47.500 25.776 -7.210 1.00117.21 C ATOM 464 C ALA 58 47.759 26.000 -4.779 1.00117.21 C ATOM 465 O ALA 58 46.687 26.070 -4.183 1.00117.21 O ATOM 466 N ALA 59 48.834 26.758 -4.429 1.00 50.95 N ATOM 467 CA ALA 59 48.846 27.717 -3.340 1.00 50.95 C ATOM 468 CB ALA 59 50.249 28.278 -3.048 1.00 50.95 C ATOM 469 C ALA 59 47.953 28.885 -3.630 1.00 50.95 C ATOM 470 O ALA 59 47.252 29.379 -2.747 1.00 50.95 O ATOM 471 N LYS 60 47.946 29.352 -4.890 1.00109.45 N ATOM 472 CA LYS 60 47.196 30.520 -5.243 1.00109.45 C ATOM 473 CB LYS 60 47.256 30.822 -6.751 1.00109.45 C ATOM 474 CG LYS 60 46.550 29.769 -7.609 1.00109.45 C ATOM 475 CD LYS 60 46.434 30.152 -9.085 1.00109.45 C ATOM 476 CE LYS 60 47.680 29.794 -9.897 1.00109.45 C ATOM 477 NZ LYS 60 47.429 30.032 -11.335 1.00109.45 N ATOM 478 C LYS 60 45.779 30.245 -4.908 1.00109.45 C ATOM 479 O LYS 60 45.052 31.109 -4.418 1.00109.45 O ATOM 480 N THR 61 45.348 29.002 -5.148 1.00176.35 N ATOM 481 CA THR 61 43.981 28.723 -4.893 1.00176.35 C ATOM 482 CB THR 61 43.449 27.595 -5.739 1.00176.35 C ATOM 483 OG1 THR 61 44.182 26.400 -5.501 1.00176.35 O ATOM 484 CG2 THR 61 43.566 27.988 -7.222 1.00176.35 C ATOM 485 C THR 61 43.814 28.358 -3.455 1.00176.35 C ATOM 486 O THR 61 43.816 27.187 -3.076 1.00176.35 O ATOM 487 N LYS 62 43.664 29.384 -2.597 1.00146.02 N ATOM 488 CA LYS 62 43.364 29.094 -1.232 1.00146.02 C ATOM 489 CB LYS 62 43.674 30.255 -0.269 1.00146.02 C ATOM 490 CG LYS 62 42.876 31.526 -0.541 1.00146.02 C ATOM 491 CD LYS 62 43.191 32.664 0.435 1.00146.02 C ATOM 492 CE LYS 62 42.742 32.400 1.872 1.00146.02 C ATOM 493 NZ LYS 62 43.126 33.542 2.733 1.00146.02 N ATOM 494 C LYS 62 41.894 28.819 -1.227 1.00146.02 C ATOM 495 O LYS 62 41.155 29.440 -1.989 1.00146.02 O ATOM 496 N ALA 63 41.423 27.880 -0.384 1.00 74.11 N ATOM 497 CA ALA 63 40.033 27.529 -0.489 1.00 74.11 C ATOM 498 CB ALA 63 39.808 26.140 -1.110 1.00 74.11 C ATOM 499 C ALA 63 39.375 27.518 0.854 1.00 74.11 C ATOM 500 O ALA 63 40.031 27.462 1.893 1.00 74.11 O ATOM 501 N THR 64 38.029 27.617 0.847 1.00 64.89 N ATOM 502 CA THR 64 37.252 27.538 2.046 1.00 64.89 C ATOM 503 CB THR 64 36.573 28.824 2.415 1.00 64.89 C ATOM 504 OG1 THR 64 35.681 29.223 1.384 1.00 64.89 O ATOM 505 CG2 THR 64 37.648 29.903 2.638 1.00 64.89 C ATOM 506 C THR 64 36.184 26.512 1.806 1.00 64.89 C ATOM 507 O THR 64 35.843 26.215 0.662 1.00 64.89 O ATOM 508 N ILE 65 35.638 25.916 2.889 1.00138.68 N ATOM 509 CA ILE 65 34.600 24.945 2.705 1.00138.68 C ATOM 510 CB ILE 65 34.783 23.665 3.452 1.00138.68 C ATOM 511 CG2 ILE 65 33.504 22.835 3.250 1.00138.68 C ATOM 512 CG1 ILE 65 36.051 22.948 2.982 1.00138.68 C ATOM 513 CD1 ILE 65 36.384 21.750 3.860 1.00138.68 C ATOM 514 C ILE 65 33.339 25.540 3.213 1.00138.68 C ATOM 515 O ILE 65 33.248 25.950 4.373 1.00138.68 O ATOM 516 N ASN 66 32.328 25.599 2.329 1.00124.33 N ATOM 517 CA ASN 66 31.076 26.156 2.714 1.00124.33 C ATOM 518 CB ASN 66 30.340 26.846 1.553 1.00124.33 C ATOM 519 CG ASN 66 29.246 27.732 2.132 1.00124.33 C ATOM 520 OD1 ASN 66 28.555 27.363 3.080 1.00124.33 O ATOM 521 ND2 ASN 66 29.089 28.947 1.543 1.00124.33 N ATOM 522 C ASN 66 30.247 25.011 3.201 1.00124.33 C ATOM 523 O ASN 66 29.989 24.056 2.471 1.00124.33 O ATOM 524 N ILE 67 29.823 25.085 4.474 1.00252.73 N ATOM 525 CA ILE 67 29.084 24.024 5.096 1.00252.73 C ATOM 526 CB ILE 67 29.645 23.698 6.465 1.00252.73 C ATOM 527 CG2 ILE 67 28.694 22.729 7.175 1.00252.73 C ATOM 528 CG1 ILE 67 31.071 23.127 6.403 1.00252.73 C ATOM 529 CD1 ILE 67 31.134 21.688 5.894 1.00252.73 C ATOM 530 C ILE 67 27.699 24.570 5.328 1.00252.73 C ATOM 531 O ILE 67 27.554 25.622 5.949 1.00252.73 O ATOM 532 N ASP 68 26.641 23.908 4.798 1.00148.27 N ATOM 533 CA ASP 68 25.301 24.361 5.077 1.00148.27 C ATOM 534 CB ASP 68 24.497 24.830 3.852 1.00148.27 C ATOM 535 CG ASP 68 23.277 25.587 4.367 1.00148.27 C ATOM 536 OD1 ASP 68 22.970 25.450 5.582 1.00148.27 O ATOM 537 OD2 ASP 68 22.641 26.315 3.560 1.00148.27 O ATOM 538 C ASP 68 24.560 23.215 5.706 1.00148.27 C ATOM 539 O ASP 68 24.388 22.161 5.092 1.00148.27 O ATOM 540 N ALA 69 24.111 23.397 6.965 1.00118.25 N ATOM 541 CA ALA 69 23.453 22.357 7.714 1.00118.25 C ATOM 542 CB ALA 69 23.372 22.654 9.221 1.00118.25 C ATOM 543 C ALA 69 22.053 22.182 7.224 1.00118.25 C ATOM 544 O ALA 69 21.432 23.127 6.740 1.00118.25 O ATOM 545 N ILE 70 21.522 20.944 7.307 1.00101.46 N ATOM 546 CA ILE 70 20.159 20.759 6.908 1.00101.46 C ATOM 547 CB ILE 70 20.003 19.915 5.678 1.00101.46 C ATOM 548 CG2 ILE 70 18.503 19.644 5.474 1.00101.46 C ATOM 549 CG1 ILE 70 20.676 20.611 4.481 1.00101.46 C ATOM 550 CD1 ILE 70 20.844 19.724 3.249 1.00101.46 C ATOM 551 C ILE 70 19.389 20.094 8.009 1.00101.46 C ATOM 552 O ILE 70 19.491 18.886 8.215 1.00101.46 O ATOM 553 N SER 71 18.577 20.878 8.743 1.00120.39 N ATOM 554 CA SER 71 17.695 20.355 9.750 1.00120.39 C ATOM 555 CB SER 71 16.722 19.296 9.199 1.00120.39 C ATOM 556 OG SER 71 15.857 19.873 8.232 1.00120.39 O ATOM 557 C SER 71 18.478 19.712 10.852 1.00120.39 C ATOM 558 O SER 71 17.898 19.117 11.759 1.00120.39 O ATOM 559 N GLY 72 19.817 19.828 10.819 1.00158.77 N ATOM 560 CA GLY 72 20.617 19.266 11.868 1.00158.77 C ATOM 561 C GLY 72 20.786 17.803 11.621 1.00158.77 C ATOM 562 O GLY 72 21.429 17.114 12.408 1.00158.77 O ATOM 563 N PHE 73 20.096 17.261 10.599 1.00257.58 N ATOM 564 CA PHE 73 20.256 15.882 10.234 1.00257.58 C ATOM 565 CB PHE 73 18.962 15.246 9.713 1.00257.58 C ATOM 566 CG PHE 73 18.078 15.262 10.912 1.00257.58 C ATOM 567 CD1 PHE 73 18.218 14.312 11.897 1.00257.58 C ATOM 568 CD2 PHE 73 17.141 16.253 11.075 1.00257.58 C ATOM 569 CE1 PHE 73 17.414 14.331 13.012 1.00257.58 C ATOM 570 CE2 PHE 73 16.332 16.278 12.187 1.00257.58 C ATOM 571 CZ PHE 73 16.466 15.317 13.158 1.00257.58 C ATOM 572 C PHE 73 21.391 15.639 9.282 1.00257.58 C ATOM 573 O PHE 73 22.071 14.619 9.387 1.00257.58 O ATOM 574 N ALA 74 21.625 16.557 8.315 1.00154.51 N ATOM 575 CA ALA 74 22.618 16.313 7.300 1.00154.51 C ATOM 576 CB ALA 74 22.020 15.752 5.998 1.00154.51 C ATOM 577 C ALA 74 23.295 17.607 6.941 1.00154.51 C ATOM 578 O ALA 74 22.836 18.679 7.321 1.00154.51 O ATOM 579 N TYR 75 24.441 17.537 6.218 1.00188.33 N ATOM 580 CA TYR 75 25.149 18.739 5.851 1.00188.33 C ATOM 581 CB TYR 75 26.452 18.943 6.650 1.00188.33 C ATOM 582 CG TYR 75 26.107 19.080 8.094 1.00188.33 C ATOM 583 CD1 TYR 75 25.954 17.962 8.885 1.00188.33 C ATOM 584 CD2 TYR 75 25.945 20.322 8.661 1.00188.33 C ATOM 585 CE1 TYR 75 25.634 18.083 10.218 1.00188.33 C ATOM 586 CE2 TYR 75 25.625 20.447 9.993 1.00188.33 C ATOM 587 CZ TYR 75 25.470 19.330 10.775 1.00188.33 C ATOM 588 OH TYR 75 25.142 19.465 12.141 1.00188.33 O ATOM 589 C TYR 75 25.546 18.666 4.400 1.00188.33 C ATOM 590 O TYR 75 25.791 17.587 3.864 1.00188.33 O ATOM 591 N GLU 76 25.609 19.834 3.716 1.00122.43 N ATOM 592 CA GLU 76 26.061 19.882 2.347 1.00122.43 C ATOM 593 CB GLU 76 25.216 20.792 1.438 1.00122.43 C ATOM 594 CG GLU 76 25.296 22.267 1.829 1.00122.43 C ATOM 595 CD GLU 76 24.436 23.076 0.867 1.00122.43 C ATOM 596 OE1 GLU 76 23.392 22.543 0.407 1.00122.43 O ATOM 597 OE2 GLU 76 24.816 24.244 0.579 1.00122.43 O ATOM 598 C GLU 76 27.441 20.479 2.392 1.00122.43 C ATOM 599 O GLU 76 27.668 21.430 3.138 1.00122.43 O ATOM 600 N TYR 77 28.401 19.929 1.609 1.00249.52 N ATOM 601 CA TYR 77 29.758 20.421 1.636 1.00249.52 C ATOM 602 CB TYR 77 30.824 19.349 1.912 1.00249.52 C ATOM 603 CG TYR 77 30.591 18.684 3.218 1.00249.52 C ATOM 604 CD1 TYR 77 29.786 17.571 3.296 1.00249.52 C ATOM 605 CD2 TYR 77 31.187 19.169 4.355 1.00249.52 C ATOM 606 CE1 TYR 77 29.579 16.951 4.504 1.00249.52 C ATOM 607 CE2 TYR 77 30.981 18.551 5.561 1.00249.52 C ATOM 608 CZ TYR 77 30.178 17.443 5.637 1.00249.52 C ATOM 609 OH TYR 77 29.969 16.811 6.881 1.00249.52 O ATOM 610 C TYR 77 30.125 20.889 0.266 1.00249.52 C ATOM 611 O TYR 77 30.150 20.104 -0.681 1.00249.52 O ATOM 612 N THR 78 30.472 22.181 0.138 1.00173.81 N ATOM 613 CA THR 78 30.863 22.713 -1.133 1.00173.81 C ATOM 614 CB THR 78 29.910 23.741 -1.668 1.00173.81 C ATOM 615 OG1 THR 78 29.810 24.825 -0.757 1.00173.81 O ATOM 616 CG2 THR 78 28.532 23.097 -1.878 1.00173.81 C ATOM 617 C THR 78 32.156 23.411 -0.925 1.00173.81 C ATOM 618 O THR 78 32.494 23.818 0.185 1.00173.81 O ATOM 619 N LEU 79 32.919 23.568 -2.015 1.00191.46 N ATOM 620 CA LEU 79 34.198 24.179 -1.874 1.00191.46 C ATOM 621 CB LEU 79 35.296 23.296 -2.495 1.00191.46 C ATOM 622 CG LEU 79 36.735 23.704 -2.161 1.00191.46 C ATOM 623 CD1 LEU 79 36.967 23.677 -0.645 1.00191.46 C ATOM 624 CD2 LEU 79 37.739 22.810 -2.903 1.00191.46 C ATOM 625 C LEU 79 34.163 25.499 -2.583 1.00191.46 C ATOM 626 O LEU 79 33.457 25.663 -3.576 1.00191.46 O ATOM 627 N GLU 80 34.887 26.504 -2.048 1.00 80.35 N ATOM 628 CA GLU 80 34.971 27.779 -2.708 1.00 80.35 C ATOM 629 CB GLU 80 34.349 28.935 -1.905 1.00 80.35 C ATOM 630 CG GLU 80 32.836 28.808 -1.722 1.00 80.35 C ATOM 631 CD GLU 80 32.366 29.948 -0.831 1.00 80.35 C ATOM 632 OE1 GLU 80 32.436 31.121 -1.288 1.00 80.35 O ATOM 633 OE2 GLU 80 31.934 29.663 0.317 1.00 80.35 O ATOM 634 C GLU 80 36.433 28.084 -2.852 1.00 80.35 C ATOM 635 O GLU 80 37.130 28.271 -1.857 1.00 80.35 O ATOM 636 N ILE 81 36.934 28.176 -4.102 1.00152.05 N ATOM 637 CA ILE 81 38.332 28.406 -4.340 1.00152.05 C ATOM 638 CB ILE 81 38.862 27.729 -5.570 1.00152.05 C ATOM 639 CG2 ILE 81 40.340 28.137 -5.690 1.00152.05 C ATOM 640 CG1 ILE 81 38.672 26.207 -5.522 1.00152.05 C ATOM 641 CD1 ILE 81 39.534 25.522 -4.468 1.00152.05 C ATOM 642 C ILE 81 38.537 29.864 -4.601 1.00152.05 C ATOM 643 O ILE 81 37.852 30.468 -5.425 1.00152.05 O ATOM 644 N ASN 82 39.507 30.476 -3.897 1.00 83.59 N ATOM 645 CA ASN 82 39.773 31.876 -4.067 1.00 83.59 C ATOM 646 CB ASN 82 40.231 32.264 -5.487 1.00 83.59 C ATOM 647 CG ASN 82 41.681 31.838 -5.668 1.00 83.59 C ATOM 648 OD1 ASN 82 42.462 31.838 -4.718 1.00 83.59 O ATOM 649 ND2 ASN 82 42.055 31.467 -6.924 1.00 83.59 N ATOM 650 C ASN 82 38.508 32.616 -3.767 1.00 83.59 C ATOM 651 O ASN 82 38.337 33.754 -4.198 1.00 83.59 O ATOM 652 N GLY 83 37.600 31.987 -2.993 1.00 51.49 N ATOM 653 CA GLY 83 36.371 32.616 -2.591 1.00 51.49 C ATOM 654 C GLY 83 35.313 32.410 -3.637 1.00 51.49 C ATOM 655 O GLY 83 34.177 32.845 -3.453 1.00 51.49 O ATOM 656 N LYS 84 35.635 31.735 -4.758 1.00 94.29 N ATOM 657 CA LYS 84 34.631 31.549 -5.770 1.00 94.29 C ATOM 658 CB LYS 84 35.140 31.770 -7.202 1.00 94.29 C ATOM 659 CG LYS 84 35.464 33.235 -7.490 1.00 94.29 C ATOM 660 CD LYS 84 36.211 33.455 -8.803 1.00 94.29 C ATOM 661 CE LYS 84 36.470 34.931 -9.108 1.00 94.29 C ATOM 662 NZ LYS 84 37.483 35.470 -8.173 1.00 94.29 N ATOM 663 C LYS 84 34.132 30.144 -5.679 1.00 94.29 C ATOM 664 O LYS 84 34.829 29.261 -5.192 1.00 94.29 O ATOM 665 N SER 85 32.902 29.884 -6.159 1.00 62.02 N ATOM 666 CA SER 85 32.338 28.569 -6.024 1.00 62.02 C ATOM 667 CB SER 85 30.876 28.472 -6.483 1.00 62.02 C ATOM 668 OG SER 85 30.798 28.570 -7.897 1.00 62.02 O ATOM 669 C SER 85 33.117 27.605 -6.860 1.00 62.02 C ATOM 670 O SER 85 33.712 27.960 -7.877 1.00 62.02 O ATOM 671 N LEU 86 33.083 26.331 -6.433 1.00123.60 N ATOM 672 CA LEU 86 33.813 25.244 -7.015 1.00123.60 C ATOM 673 CB LEU 86 33.622 23.959 -6.188 1.00123.60 C ATOM 674 CG LEU 86 34.634 22.822 -6.444 1.00123.60 C ATOM 675 CD1 LEU 86 34.328 21.607 -5.560 1.00123.60 C ATOM 676 CD2 LEU 86 34.735 22.437 -7.920 1.00123.60 C ATOM 677 C LEU 86 33.297 25.048 -8.405 1.00123.60 C ATOM 678 O LEU 86 34.040 24.693 -9.320 1.00123.60 O ATOM 679 N LYS 87 31.993 25.316 -8.608 1.00114.76 N ATOM 680 CA LYS 87 31.372 25.103 -9.883 1.00114.76 C ATOM 681 CB LYS 87 29.915 25.588 -9.921 1.00114.76 C ATOM 682 CG LYS 87 28.970 24.816 -9.002 1.00114.76 C ATOM 683 CD LYS 87 28.883 23.328 -9.339 1.00114.76 C ATOM 684 CE LYS 87 27.891 22.558 -8.464 1.00114.76 C ATOM 685 NZ LYS 87 26.544 22.593 -9.077 1.00114.76 N ATOM 686 C LYS 87 32.104 25.908 -10.903 1.00114.76 C ATOM 687 O LYS 87 32.304 25.464 -12.035 1.00114.76 O ATOM 688 N LYS 88 32.526 27.123 -10.526 1.00135.51 N ATOM 689 CA LYS 88 33.163 27.980 -11.476 1.00135.51 C ATOM 690 CB LYS 88 33.553 29.333 -10.855 1.00135.51 C ATOM 691 CG LYS 88 33.654 30.466 -11.873 1.00135.51 C ATOM 692 CD LYS 88 34.620 30.189 -13.021 1.00135.51 C ATOM 693 CE LYS 88 34.529 31.228 -14.137 1.00135.51 C ATOM 694 NZ LYS 88 35.451 30.868 -15.236 1.00135.51 N ATOM 695 C LYS 88 34.419 27.311 -11.955 1.00135.51 C ATOM 696 O LYS 88 34.702 27.290 -13.149 1.00135.51 O ATOM 697 N TYR 89 35.214 26.755 -11.020 1.00120.52 N ATOM 698 CA TYR 89 36.461 26.111 -11.327 1.00120.52 C ATOM 699 CB TYR 89 37.393 25.981 -10.116 1.00120.52 C ATOM 700 CG TYR 89 37.800 27.388 -9.847 1.00120.52 C ATOM 701 CD1 TYR 89 37.040 28.191 -9.031 1.00120.52 C ATOM 702 CD2 TYR 89 38.928 27.913 -10.437 1.00120.52 C ATOM 703 CE1 TYR 89 37.408 29.494 -8.791 1.00120.52 C ATOM 704 CE2 TYR 89 39.301 29.215 -10.201 1.00120.52 C ATOM 705 CZ TYR 89 38.539 30.008 -9.374 1.00120.52 C ATOM 706 OH TYR 89 38.917 31.344 -9.127 1.00120.52 O ATOM 707 C TYR 89 36.289 24.790 -12.005 1.00120.52 C ATOM 708 O TYR 89 37.118 24.404 -12.827 1.00120.52 O ATOM 709 N MET 90 35.249 24.014 -11.651 1.00124.20 N ATOM 710 CA MET 90 35.119 22.757 -12.327 1.00124.20 C ATOM 711 CB MET 90 34.606 21.612 -11.435 1.00124.20 C ATOM 712 CG MET 90 33.221 21.848 -10.836 1.00124.20 C ATOM 713 SD MET 90 32.623 20.483 -9.792 1.00124.20 S ATOM 714 CE MET 90 31.068 21.298 -9.337 1.00124.20 C ATOM 715 C MET 90 34.164 22.929 -13.506 1.00124.20 C ATOM 716 O MET 90 33.141 22.197 -13.562 1.00124.20 O ATOM 717 OXT MET 90 34.455 23.793 -14.377 1.00124.20 O TER 718 MET 90 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 58.11 65.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 46.65 72.9 118 100.0 118 ARMSMC SURFACE . . . . . . . . 68.53 57.4 108 100.0 108 ARMSMC BURIED . . . . . . . . 36.64 77.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.73 48.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 80.31 51.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 80.47 51.9 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 92.97 36.4 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 68.51 64.5 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.69 60.0 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 63.37 63.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 67.78 61.5 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 60.75 63.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 81.29 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.59 45.8 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 71.59 45.8 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 63.29 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 73.04 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 67.05 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 56.25 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 56.25 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 64.10 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 55.32 54.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 61.11 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.64 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.64 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0515 CRMSCA SECONDARY STRUCTURE . . 3.25 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.53 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.67 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.77 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.43 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.70 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.76 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.54 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.71 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.87 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.92 204 100.0 204 CRMSSC BURIED . . . . . . . . 3.98 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.68 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.21 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.82 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.41 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 130.542 0.938 0.941 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 132.663 0.953 0.955 59 100.0 59 ERRCA SURFACE . . . . . . . . 112.399 0.922 0.926 55 100.0 55 ERRCA BURIED . . . . . . . . 159.051 0.963 0.964 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 131.001 0.937 0.940 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 133.041 0.952 0.954 293 100.0 293 ERRMC SURFACE . . . . . . . . 113.109 0.920 0.925 269 100.0 269 ERRMC BURIED . . . . . . . . 158.820 0.962 0.963 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 140.438 0.920 0.925 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 139.106 0.919 0.924 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 144.241 0.938 0.942 252 100.0 252 ERRSC SURFACE . . . . . . . . 116.887 0.897 0.904 204 100.0 204 ERRSC BURIED . . . . . . . . 172.047 0.951 0.954 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 135.455 0.929 0.933 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 138.608 0.945 0.948 488 100.0 488 ERRALL SURFACE . . . . . . . . 114.544 0.909 0.915 424 100.0 424 ERRALL BURIED . . . . . . . . 165.820 0.957 0.959 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 8 36 52 75 87 90 90 DISTCA CA (P) 8.89 40.00 57.78 83.33 96.67 90 DISTCA CA (RMS) 0.82 1.50 1.84 2.67 3.46 DISTCA ALL (N) 44 244 366 519 665 716 716 DISTALL ALL (P) 6.15 34.08 51.12 72.49 92.88 716 DISTALL ALL (RMS) 0.82 1.48 1.86 2.63 3.98 DISTALL END of the results output