####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS307_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS307_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.73 4.73 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 61 - 86 1.94 4.91 LCS_AVERAGE: 18.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 73 - 85 0.98 5.55 LCS_AVERAGE: 8.41 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 5 90 3 3 6 10 23 27 29 33 37 53 58 67 69 71 75 78 80 84 86 87 LCS_GDT T 2 T 2 3 5 90 3 6 8 9 12 16 28 35 47 57 62 67 70 76 77 83 85 87 88 89 LCS_GDT D 3 D 3 3 7 90 3 3 9 14 28 32 37 44 49 60 63 67 72 76 77 83 84 87 88 89 LCS_GDT L 4 L 4 3 21 90 3 3 4 6 39 42 52 58 63 66 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 5 V 5 8 21 90 4 13 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT A 6 A 6 8 21 90 11 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 7 V 7 8 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT W 8 W 8 8 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT D 9 D 9 8 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 10 V 10 8 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT A 11 A 11 8 21 90 8 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT L 12 L 12 8 21 90 4 9 26 32 53 56 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT S 13 S 13 5 21 90 4 5 10 14 23 40 46 55 60 64 68 74 75 77 81 83 85 87 88 89 LCS_GDT D 14 D 14 10 21 90 10 25 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 15 G 15 10 21 90 5 25 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 16 V 16 10 21 90 10 25 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT H 17 H 17 10 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 18 K 18 10 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT I 19 I 19 10 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 20 E 20 10 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT F 21 F 21 10 21 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 22 E 22 10 21 90 7 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT H 23 H 23 10 21 90 5 16 35 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 24 G 24 5 21 90 3 3 16 39 52 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT T 25 T 25 4 5 90 3 4 5 5 5 9 10 13 26 44 70 72 75 77 81 83 85 87 88 89 LCS_GDT T 26 T 26 4 5 90 3 4 5 5 5 5 6 9 10 12 14 36 42 47 67 83 85 87 88 89 LCS_GDT S 27 S 27 4 5 90 3 4 5 5 5 7 8 16 23 30 40 49 66 76 81 83 85 87 88 89 LCS_GDT G 28 G 28 4 11 90 3 4 17 24 41 50 58 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 29 K 29 5 11 90 3 7 17 27 41 52 58 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT R 30 R 30 5 11 90 3 4 11 23 43 53 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 31 V 31 6 11 90 4 19 38 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 32 V 32 6 11 90 5 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT Y 33 Y 33 6 11 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 34 V 34 6 11 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT D 35 D 35 6 11 90 4 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 36 G 36 6 11 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 37 K 37 6 11 90 4 13 32 42 53 56 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 38 E 38 4 11 90 3 6 21 39 52 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 39 E 39 4 5 90 3 4 4 6 6 11 33 48 61 66 70 74 75 77 81 83 85 87 88 89 LCS_GDT I 40 I 40 3 5 90 3 3 4 6 19 25 48 51 63 67 70 74 75 77 81 83 85 87 88 89 LCS_GDT R 41 R 41 4 6 90 3 3 4 14 27 41 51 59 63 67 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 42 K 42 4 6 90 3 3 4 5 6 8 17 24 32 44 54 67 72 77 81 83 85 87 88 89 LCS_GDT E 43 E 43 4 6 90 3 3 4 6 10 15 19 25 33 44 50 55 68 74 80 83 85 87 88 89 LCS_GDT W 44 W 44 4 6 90 3 4 4 6 6 8 9 12 17 26 36 43 50 57 67 76 83 85 87 89 LCS_GDT M 45 M 45 4 6 90 3 4 4 6 6 10 22 29 36 44 53 64 72 77 81 83 85 87 88 89 LCS_GDT F 46 F 46 4 6 90 3 4 5 5 6 10 24 28 36 46 57 68 75 77 81 83 85 87 88 89 LCS_GDT K 47 K 47 4 6 90 3 4 8 15 25 33 41 48 58 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT L 48 L 48 4 9 90 3 4 4 8 9 19 29 43 58 67 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 49 V 49 4 9 90 3 4 6 8 22 46 57 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 50 G 50 8 10 90 7 22 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 51 K 51 8 10 90 6 17 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 52 E 52 8 10 90 7 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT T 53 T 53 8 10 90 6 17 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT F 54 F 54 8 10 90 6 21 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT Y 55 Y 55 8 10 90 6 13 27 46 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT V 56 V 56 8 10 90 5 13 27 46 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 57 G 57 8 10 90 3 6 15 30 37 50 57 61 65 67 70 72 75 77 80 83 85 87 88 89 LCS_GDT A 58 A 58 5 10 90 3 4 7 10 21 41 48 60 64 67 70 72 75 77 80 83 85 87 88 89 LCS_GDT A 59 A 59 5 12 90 5 13 26 46 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 60 K 60 5 12 90 4 4 8 22 37 45 56 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT T 61 T 61 9 26 90 4 13 37 46 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 62 K 62 9 26 90 4 17 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT A 63 A 63 9 26 90 5 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT T 64 T 64 9 26 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT I 65 I 65 9 26 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT N 66 N 66 9 26 90 5 23 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT I 67 I 67 9 26 90 10 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT D 68 D 68 9 26 90 7 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT A 69 A 69 9 26 90 3 26 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT I 70 I 70 7 26 90 3 14 32 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT S 71 S 71 7 26 90 3 9 13 18 26 31 54 64 66 68 70 74 75 77 81 83 85 87 88 89 LCS_GDT G 72 G 72 7 26 90 3 9 13 27 40 53 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT F 73 F 73 13 26 90 3 6 21 39 52 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT A 74 A 74 13 26 90 12 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT Y 75 Y 75 13 26 90 5 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 76 E 76 13 26 90 5 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT Y 77 Y 77 13 26 90 11 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT T 78 T 78 13 26 90 7 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT L 79 L 79 13 26 90 8 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT E 80 E 80 13 26 90 8 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT I 81 I 81 13 26 90 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT N 82 N 82 13 26 90 4 26 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT G 83 G 83 13 26 90 4 14 34 47 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 84 K 84 13 26 90 8 26 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT S 85 S 85 13 26 90 7 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT L 86 L 86 9 26 90 3 8 24 46 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 87 K 87 6 16 90 3 5 10 18 24 30 49 54 61 66 71 74 75 77 81 83 85 87 88 89 LCS_GDT K 88 K 88 6 16 90 3 7 16 26 36 49 54 60 65 68 71 74 75 77 81 83 85 87 88 89 LCS_GDT Y 89 Y 89 6 13 90 3 5 6 14 19 25 29 37 45 55 59 65 68 72 75 78 84 86 88 89 LCS_GDT M 90 M 90 3 13 90 0 2 3 15 24 30 48 54 59 64 67 72 75 77 81 83 85 87 88 89 LCS_AVERAGE LCS_A: 42.36 ( 8.41 18.67 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 27 40 48 53 57 59 64 66 68 71 74 75 77 81 83 85 87 88 89 GDT PERCENT_AT 14.44 30.00 44.44 53.33 58.89 63.33 65.56 71.11 73.33 75.56 78.89 82.22 83.33 85.56 90.00 92.22 94.44 96.67 97.78 98.89 GDT RMS_LOCAL 0.29 0.61 0.92 1.16 1.35 1.55 1.63 2.07 2.22 2.46 2.75 2.95 3.01 3.20 3.79 4.03 4.21 4.35 4.45 4.59 GDT RMS_ALL_AT 5.01 5.00 5.04 5.00 5.12 4.98 5.01 4.91 4.91 4.87 4.83 4.84 4.90 4.84 4.78 4.75 4.75 4.74 4.74 4.74 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 38 E 38 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: F 73 F 73 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 12.031 0 0.276 1.012 16.371 1.905 0.952 LGA T 2 T 2 10.211 0 0.234 1.312 14.581 0.476 0.272 LGA D 3 D 3 9.361 0 0.375 0.858 12.396 5.357 2.679 LGA L 4 L 4 5.136 0 0.621 1.362 9.801 43.333 25.060 LGA V 5 V 5 1.899 0 0.672 0.564 6.867 66.905 48.367 LGA A 6 A 6 0.761 0 0.075 0.093 1.012 88.214 88.667 LGA V 7 V 7 0.879 0 0.050 0.220 1.812 90.476 86.667 LGA W 8 W 8 0.645 0 0.121 0.120 1.261 90.476 88.537 LGA D 9 D 9 0.564 0 0.084 0.204 0.935 90.476 94.048 LGA V 10 V 10 0.298 0 0.103 0.174 0.802 100.000 97.279 LGA A 11 A 11 0.917 0 0.141 0.141 2.276 82.024 80.190 LGA L 12 L 12 3.340 0 0.163 1.063 5.508 43.095 45.714 LGA S 13 S 13 6.305 0 0.391 0.556 8.230 21.667 16.429 LGA D 14 D 14 1.721 0 0.101 1.176 6.722 66.905 47.679 LGA G 15 G 15 1.749 0 0.080 0.080 1.764 75.000 75.000 LGA V 16 V 16 1.465 0 0.199 1.216 3.379 77.262 72.177 LGA H 17 H 17 0.557 0 0.197 1.274 5.523 90.476 70.000 LGA K 18 K 18 0.761 0 0.058 0.898 2.606 90.476 82.910 LGA I 19 I 19 1.022 0 0.062 0.464 1.380 83.690 85.952 LGA E 20 E 20 1.214 0 0.126 0.885 3.097 79.286 70.529 LGA F 21 F 21 1.034 0 0.121 0.998 5.020 83.690 64.199 LGA E 22 E 22 1.446 0 0.174 0.617 2.289 75.119 73.862 LGA H 23 H 23 2.587 0 0.674 0.944 6.885 66.905 46.000 LGA G 24 G 24 3.481 0 0.582 0.582 4.502 42.143 42.143 LGA T 25 T 25 7.857 0 0.252 1.030 11.667 8.452 4.830 LGA T 26 T 26 11.053 0 0.545 0.802 14.814 0.357 0.204 LGA S 27 S 27 9.490 0 0.330 0.400 9.490 2.262 3.968 LGA G 28 G 28 4.614 0 0.078 0.078 5.971 35.000 35.000 LGA K 29 K 29 4.434 0 0.164 1.437 9.844 34.286 26.455 LGA R 30 R 30 4.134 0 0.088 1.197 14.710 52.619 23.636 LGA V 31 V 31 1.517 0 0.204 0.460 3.907 68.810 65.170 LGA V 32 V 32 1.458 0 0.054 0.093 2.166 79.286 75.374 LGA Y 33 Y 33 1.403 0 0.173 0.726 2.230 79.286 76.508 LGA V 34 V 34 0.833 0 0.042 1.082 2.696 90.595 83.197 LGA D 35 D 35 0.796 0 0.119 0.324 2.453 90.595 81.786 LGA G 36 G 36 0.631 0 0.326 0.326 1.111 92.976 92.976 LGA K 37 K 37 3.333 0 0.457 0.783 13.611 57.500 28.624 LGA E 38 E 38 3.221 0 0.230 0.847 10.993 61.429 31.058 LGA E 39 E 39 6.929 0 0.317 0.976 8.292 13.214 10.529 LGA I 40 I 40 6.225 0 0.710 0.881 11.445 27.262 16.905 LGA R 41 R 41 6.343 0 0.179 1.334 6.955 16.190 36.537 LGA K 42 K 42 9.949 0 0.157 1.085 13.353 1.071 0.476 LGA E 43 E 43 11.046 0 0.613 1.014 14.546 0.000 0.000 LGA W 44 W 44 12.792 0 0.070 1.092 21.437 0.119 0.034 LGA M 45 M 45 11.106 0 0.730 1.082 12.098 0.000 0.000 LGA F 46 F 46 10.028 0 0.406 1.104 13.882 0.714 0.260 LGA K 47 K 47 7.885 0 0.028 1.343 8.419 13.810 12.116 LGA L 48 L 48 7.283 0 0.609 0.582 13.079 9.048 4.762 LGA V 49 V 49 4.535 0 0.093 1.198 6.760 46.786 35.442 LGA G 50 G 50 2.115 0 0.460 0.460 2.115 68.810 68.810 LGA K 51 K 51 1.488 0 0.120 0.926 5.787 75.000 58.413 LGA E 52 E 52 1.550 0 0.184 1.196 6.505 77.143 56.561 LGA T 53 T 53 1.778 0 0.124 0.186 2.765 72.857 68.299 LGA F 54 F 54 1.782 0 0.298 1.446 5.385 75.000 66.017 LGA Y 55 Y 55 2.709 0 0.066 0.549 3.856 59.048 52.540 LGA V 56 V 56 2.856 0 0.108 0.160 3.481 53.571 56.190 LGA G 57 G 57 5.521 0 0.203 0.203 5.584 25.119 25.119 LGA A 58 A 58 6.389 0 0.187 0.188 7.868 22.857 19.714 LGA A 59 A 59 2.135 0 0.345 0.369 3.680 53.810 57.619 LGA K 60 K 60 4.865 0 0.184 0.306 14.253 45.476 21.481 LGA T 61 T 61 2.396 0 0.486 1.303 6.666 54.524 40.612 LGA K 62 K 62 1.443 0 0.105 0.676 5.243 83.690 64.762 LGA A 63 A 63 0.995 0 0.094 0.089 1.347 88.214 86.857 LGA T 64 T 64 0.278 0 0.085 0.136 0.355 100.000 100.000 LGA I 65 I 65 0.821 0 0.034 0.773 2.837 85.952 80.714 LGA N 66 N 66 1.736 0 0.215 1.222 4.904 75.000 62.024 LGA I 67 I 67 1.459 0 0.071 1.046 3.183 77.143 69.286 LGA D 68 D 68 1.539 0 0.170 0.248 3.004 79.286 69.286 LGA A 69 A 69 0.914 0 0.109 0.147 2.106 83.810 80.000 LGA I 70 I 70 1.795 0 0.308 1.089 4.872 77.381 64.107 LGA S 71 S 71 5.521 0 0.376 0.505 6.512 24.048 21.111 LGA G 72 G 72 4.463 0 0.452 0.452 4.463 52.976 52.976 LGA F 73 F 73 3.003 0 0.645 0.819 11.749 59.405 28.139 LGA A 74 A 74 1.440 0 0.615 0.622 2.038 75.119 74.667 LGA Y 75 Y 75 0.681 0 0.208 0.302 1.387 88.214 84.444 LGA E 76 E 76 0.961 0 0.180 0.842 3.373 88.214 71.270 LGA Y 77 Y 77 0.067 0 0.034 0.291 1.678 95.238 86.111 LGA T 78 T 78 1.053 0 0.113 0.606 2.797 85.952 80.612 LGA L 79 L 79 0.751 0 0.056 0.169 0.831 90.476 91.667 LGA E 80 E 80 0.766 0 0.047 0.559 2.495 92.857 80.106 LGA I 81 I 81 0.779 0 0.132 0.210 1.327 85.952 88.214 LGA N 82 N 82 2.158 0 0.048 1.000 4.068 64.881 59.464 LGA G 83 G 83 2.476 0 0.171 0.171 2.476 66.786 66.786 LGA K 84 K 84 1.689 0 0.202 0.731 4.126 81.667 66.085 LGA S 85 S 85 1.058 0 0.133 0.514 2.751 73.214 67.857 LGA L 86 L 86 3.029 0 0.077 1.440 8.481 57.500 38.571 LGA K 87 K 87 6.281 0 0.119 1.317 13.471 20.476 9.577 LGA K 88 K 88 5.297 0 0.029 1.031 9.160 14.048 37.090 LGA Y 89 Y 89 10.245 0 0.735 1.142 17.145 2.262 0.754 LGA M 90 M 90 8.061 0 0.430 0.980 10.454 2.262 10.417 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.729 4.579 5.966 56.581 50.394 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 64 2.07 61.667 53.107 2.944 LGA_LOCAL RMSD: 2.074 Number of atoms: 64 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.905 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.729 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.479149 * X + 0.805303 * Y + 0.349147 * Z + 36.082050 Y_new = -0.388951 * X + -0.551399 * Y + 0.738022 * Z + 21.464754 Z_new = 0.786850 * X + 0.217821 * Y + 0.577426 * Z + 0.947919 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.459725 -0.905689 0.360723 [DEG: -140.9319 -51.8921 20.6679 ] ZXZ: 2.699708 0.955224 1.300733 [DEG: 154.6819 54.7303 74.5265 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS307_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS307_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 64 2.07 53.107 4.73 REMARK ---------------------------------------------------------- MOLECULE T0540TS307_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2KD2_A ATOM 1 N MET 1 29.451 3.603 1.373 1.00 0.00 N ATOM 2 CA MET 1 28.491 4.707 1.223 1.00 0.00 C ATOM 3 C MET 1 29.139 6.052 1.640 1.00 0.00 C ATOM 4 O MET 1 29.633 6.176 2.772 1.00 0.00 O ATOM 5 CB MET 1 27.241 4.395 2.044 1.00 0.00 C ATOM 6 CG MET 1 25.969 4.996 1.483 1.00 0.00 C ATOM 7 SD MET 1 25.375 4.248 -0.058 1.00 0.00 S ATOM 8 CE MET 1 24.081 3.184 0.627 1.00 0.00 C ATOM 9 N THR 2 28.813 7.108 0.904 1.00 0.00 N ATOM 10 CA THR 2 29.390 8.449 1.088 1.00 0.00 C ATOM 11 C THR 2 28.486 9.439 1.927 1.00 0.00 C ATOM 12 O THR 2 28.704 10.641 1.802 1.00 0.00 O ATOM 13 CB THR 2 29.823 8.978 -0.329 1.00 0.00 C ATOM 14 OG1 THR 2 30.722 10.117 -0.217 1.00 0.00 O ATOM 15 CG2 THR 2 28.602 9.306 -1.267 1.00 0.00 C ATOM 16 N ASP 3 27.476 8.999 2.671 1.00 0.00 N ATOM 17 CA ASP 3 26.701 9.929 3.500 1.00 0.00 C ATOM 18 C ASP 3 27.632 10.716 4.470 1.00 0.00 C ATOM 19 O ASP 3 27.469 11.939 4.558 1.00 0.00 O ATOM 20 CB ASP 3 25.631 9.094 4.207 1.00 0.00 C ATOM 21 CG ASP 3 24.582 9.972 4.871 1.00 0.00 C ATOM 22 OD1 ASP 3 23.663 10.383 4.192 1.00 0.00 O ATOM 23 OD2 ASP 3 24.623 10.202 6.066 1.00 0.00 O ATOM 24 N LEU 4 28.472 10.027 5.262 1.00 0.00 N ATOM 25 CA LEU 4 29.451 10.612 6.132 1.00 0.00 C ATOM 26 C LEU 4 30.598 11.401 5.407 1.00 0.00 C ATOM 27 O LEU 4 31.433 11.936 6.149 1.00 0.00 O ATOM 28 CB LEU 4 30.028 9.469 6.957 1.00 0.00 C ATOM 29 CG LEU 4 29.039 8.804 7.961 1.00 0.00 C ATOM 30 CD1 LEU 4 29.687 7.563 8.566 1.00 0.00 C ATOM 31 CD2 LEU 4 28.586 9.858 8.993 1.00 0.00 C ATOM 32 N VAL 5 30.949 11.087 4.164 1.00 0.00 N ATOM 33 CA VAL 5 32.096 11.807 3.573 1.00 0.00 C ATOM 34 C VAL 5 31.704 12.575 2.296 1.00 0.00 C ATOM 35 O VAL 5 30.781 12.196 1.571 1.00 0.00 O ATOM 36 CB VAL 5 33.234 10.743 3.412 1.00 0.00 C ATOM 37 CG1 VAL 5 34.209 10.776 4.650 1.00 0.00 C ATOM 38 CG2 VAL 5 32.768 9.308 3.323 1.00 0.00 C ATOM 39 N ALA 6 32.472 13.616 1.980 1.00 0.00 N ATOM 40 CA ALA 6 32.332 14.404 0.779 1.00 0.00 C ATOM 41 C ALA 6 33.607 14.370 -0.093 1.00 0.00 C ATOM 42 O ALA 6 34.687 14.028 0.393 1.00 0.00 O ATOM 43 CB ALA 6 32.061 15.827 1.261 1.00 0.00 C ATOM 44 N VAL 7 33.382 14.283 -1.405 1.00 0.00 N ATOM 45 CA VAL 7 34.503 14.336 -2.377 1.00 0.00 C ATOM 46 C VAL 7 34.195 15.441 -3.420 1.00 0.00 C ATOM 47 O VAL 7 33.048 15.689 -3.799 1.00 0.00 O ATOM 48 CB VAL 7 34.611 13.006 -3.166 1.00 0.00 C ATOM 49 CG1 VAL 7 35.956 12.934 -3.976 1.00 0.00 C ATOM 50 CG2 VAL 7 34.349 11.730 -2.455 1.00 0.00 C ATOM 51 N TRP 8 35.251 16.119 -3.829 1.00 0.00 N ATOM 52 CA TRP 8 35.262 17.137 -4.869 1.00 0.00 C ATOM 53 C TRP 8 36.494 16.924 -5.770 1.00 0.00 C ATOM 54 O TRP 8 37.644 17.169 -5.359 1.00 0.00 O ATOM 55 CB TRP 8 35.363 18.496 -4.138 1.00 0.00 C ATOM 56 CG TRP 8 34.154 18.752 -3.203 1.00 0.00 C ATOM 57 CD1 TRP 8 33.047 19.426 -3.492 1.00 0.00 C ATOM 58 CD2 TRP 8 34.056 18.494 -1.805 1.00 0.00 C ATOM 59 NE1 TRP 8 32.277 19.631 -2.374 1.00 0.00 N ATOM 60 CE2 TRP 8 32.862 19.082 -1.368 1.00 0.00 C ATOM 61 CE3 TRP 8 34.909 17.862 -0.916 1.00 0.00 C ATOM 62 CZ2 TRP 8 32.465 19.065 -0.035 1.00 0.00 C ATOM 63 CZ3 TRP 8 34.525 17.837 0.425 1.00 0.00 C ATOM 64 CH2 TRP 8 33.330 18.424 0.854 1.00 0.00 H ATOM 65 N ASP 9 36.217 16.624 -7.023 1.00 0.00 N ATOM 66 CA ASP 9 37.284 16.503 -8.007 1.00 0.00 C ATOM 67 C ASP 9 37.402 17.771 -8.893 1.00 0.00 C ATOM 68 O ASP 9 36.439 18.143 -9.603 1.00 0.00 O ATOM 69 CB ASP 9 36.996 15.306 -8.904 1.00 0.00 C ATOM 70 CG ASP 9 37.251 13.916 -8.354 1.00 0.00 C ATOM 71 OD1 ASP 9 38.130 13.606 -7.521 1.00 0.00 O ATOM 72 OD2 ASP 9 36.480 13.027 -8.808 1.00 0.00 O ATOM 73 N VAL 10 38.582 18.341 -8.922 1.00 0.00 N ATOM 74 CA VAL 10 38.825 19.571 -9.653 1.00 0.00 C ATOM 75 C VAL 10 40.205 19.547 -10.347 1.00 0.00 C ATOM 76 O VAL 10 40.773 18.466 -10.575 1.00 0.00 O ATOM 77 CB VAL 10 38.673 20.708 -8.598 1.00 0.00 C ATOM 78 CG1 VAL 10 37.221 20.850 -8.125 1.00 0.00 C ATOM 79 CG2 VAL 10 39.633 20.567 -7.410 1.00 0.00 C ATOM 80 N ALA 11 40.470 20.635 -11.065 1.00 0.00 N ATOM 81 CA ALA 11 41.750 20.830 -11.695 1.00 0.00 C ATOM 82 C ALA 11 42.642 21.690 -10.764 1.00 0.00 C ATOM 83 O ALA 11 42.478 22.906 -10.760 1.00 0.00 O ATOM 84 CB ALA 11 41.539 21.494 -13.051 1.00 0.00 C ATOM 85 N LEU 12 43.660 21.073 -10.169 1.00 0.00 N ATOM 86 CA LEU 12 44.551 21.677 -9.184 1.00 0.00 C ATOM 87 C LEU 12 45.976 21.076 -9.273 1.00 0.00 C ATOM 88 O LEU 12 46.125 19.850 -9.292 1.00 0.00 O ATOM 89 CB LEU 12 43.963 21.348 -7.798 1.00 0.00 C ATOM 90 CG LEU 12 44.232 22.443 -6.720 1.00 0.00 C ATOM 91 CD1 LEU 12 43.003 22.628 -5.842 1.00 0.00 C ATOM 92 CD2 LEU 12 45.446 22.084 -5.875 1.00 0.00 C ATOM 93 N SER 13 47.009 21.909 -9.098 1.00 0.00 N ATOM 94 CA SER 13 48.444 21.499 -9.048 1.00 0.00 C ATOM 95 C SER 13 48.801 20.715 -10.367 1.00 0.00 C ATOM 96 O SER 13 49.530 19.692 -10.300 1.00 0.00 O ATOM 97 CB SER 13 48.823 20.719 -7.772 1.00 0.00 C ATOM 98 OG SER 13 48.484 21.301 -6.560 1.00 0.00 O ATOM 99 N ASP 14 48.488 21.282 -11.510 1.00 0.00 N ATOM 100 CA ASP 14 48.668 20.703 -12.851 1.00 0.00 C ATOM 101 C ASP 14 48.097 19.302 -13.026 1.00 0.00 C ATOM 102 O ASP 14 48.676 18.512 -13.800 1.00 0.00 O ATOM 103 CB ASP 14 50.158 20.800 -13.288 1.00 0.00 C ATOM 104 CG ASP 14 50.302 20.889 -14.822 1.00 0.00 C ATOM 105 OD1 ASP 14 49.542 21.532 -15.564 1.00 0.00 O ATOM 106 OD2 ASP 14 51.232 20.241 -15.363 1.00 0.00 O ATOM 107 N GLY 15 46.849 19.017 -12.600 1.00 0.00 N ATOM 108 CA GLY 15 46.253 17.686 -12.677 1.00 0.00 C ATOM 109 C GLY 15 44.867 17.642 -12.006 1.00 0.00 C ATOM 110 O GLY 15 44.150 18.645 -12.080 1.00 0.00 O ATOM 111 N VAL 16 44.308 16.441 -11.926 1.00 0.00 N ATOM 112 CA VAL 16 43.052 16.180 -11.242 1.00 0.00 C ATOM 113 C VAL 16 43.354 16.026 -9.725 1.00 0.00 C ATOM 114 O VAL 16 43.931 15.021 -9.280 1.00 0.00 O ATOM 115 CB VAL 16 42.330 14.940 -11.817 1.00 0.00 C ATOM 116 CG1 VAL 16 41.073 14.592 -11.003 1.00 0.00 C ATOM 117 CG2 VAL 16 41.930 15.057 -13.284 1.00 0.00 C ATOM 118 N HIS 17 42.861 16.987 -8.955 1.00 0.00 N ATOM 119 CA HIS 17 43.139 17.030 -7.552 1.00 0.00 C ATOM 120 C HIS 17 41.904 16.524 -6.746 1.00 0.00 C ATOM 121 O HIS 17 40.857 17.188 -6.731 1.00 0.00 O ATOM 122 CB HIS 17 43.649 18.425 -7.189 1.00 0.00 C ATOM 123 CG HIS 17 44.349 18.524 -5.852 1.00 0.00 C ATOM 124 ND1 HIS 17 43.701 18.373 -4.626 1.00 0.00 N ATOM 125 CD2 HIS 17 45.669 18.837 -5.635 1.00 0.00 C ATOM 126 CE1 HIS 17 44.662 18.575 -3.701 1.00 0.00 C ATOM 127 NE2 HIS 17 45.842 18.855 -4.280 1.00 0.00 N ATOM 128 N LYS 18 42.071 15.421 -6.027 1.00 0.00 N ATOM 129 CA LYS 18 41.006 14.756 -5.267 1.00 0.00 C ATOM 130 C LYS 18 40.933 15.309 -3.829 1.00 0.00 C ATOM 131 O LYS 18 41.915 15.221 -3.068 1.00 0.00 O ATOM 132 CB LYS 18 41.286 13.247 -5.255 1.00 0.00 C ATOM 133 CG LYS 18 40.130 12.279 -5.221 1.00 0.00 C ATOM 134 CD LYS 18 39.668 11.856 -3.846 1.00 0.00 C ATOM 135 CE LYS 18 38.924 10.456 -3.908 1.00 0.00 C ATOM 136 NZ LYS 18 39.830 9.498 -4.594 1.00 0.00 N ATOM 137 N ILE 19 39.788 15.875 -3.492 1.00 0.00 N ATOM 138 CA ILE 19 39.496 16.398 -2.150 1.00 0.00 C ATOM 139 C ILE 19 38.334 15.609 -1.469 1.00 0.00 C ATOM 140 O ILE 19 37.386 15.199 -2.085 1.00 0.00 O ATOM 141 CB ILE 19 39.195 17.921 -2.371 1.00 0.00 C ATOM 142 CG1 ILE 19 39.901 18.624 -3.638 1.00 0.00 C ATOM 143 CG2 ILE 19 40.024 18.737 -1.241 1.00 0.00 C ATOM 144 CD1 ILE 19 40.564 19.977 -3.927 1.00 0.00 C ATOM 145 N GLU 20 38.595 15.172 -0.207 1.00 0.00 N ATOM 146 CA GLU 20 37.567 14.496 0.532 1.00 0.00 C ATOM 147 C GLU 20 37.521 14.914 2.020 1.00 0.00 C ATOM 148 O GLU 20 38.463 14.764 2.757 1.00 0.00 O ATOM 149 CB GLU 20 37.746 12.976 0.454 1.00 0.00 C ATOM 150 CG GLU 20 38.733 12.262 1.350 1.00 0.00 C ATOM 151 CD GLU 20 38.595 10.759 1.165 1.00 0.00 C ATOM 152 OE1 GLU 20 39.192 10.235 0.221 1.00 0.00 O ATOM 153 OE2 GLU 20 37.861 10.134 1.934 1.00 0.00 O ATOM 154 N PHE 21 36.400 15.535 2.399 1.00 0.00 N ATOM 155 CA PHE 21 36.055 16.060 3.710 1.00 0.00 C ATOM 156 C PHE 21 35.471 14.824 4.545 1.00 0.00 C ATOM 157 O PHE 21 34.287 14.496 4.364 1.00 0.00 O ATOM 158 CB PHE 21 35.072 17.264 3.764 1.00 0.00 C ATOM 159 CG PHE 21 35.658 18.565 3.322 1.00 0.00 C ATOM 160 CD1 PHE 21 36.411 18.745 2.176 1.00 0.00 C ATOM 161 CD2 PHE 21 35.433 19.658 4.146 1.00 0.00 C ATOM 162 CE1 PHE 21 36.941 19.977 1.842 1.00 0.00 C ATOM 163 CE2 PHE 21 35.967 20.891 3.805 1.00 0.00 C ATOM 164 CZ PHE 21 36.721 21.061 2.660 1.00 0.00 C ATOM 165 N GLU 22 36.161 14.383 5.625 1.00 0.00 N ATOM 166 CA GLU 22 35.679 13.236 6.421 1.00 0.00 C ATOM 167 C GLU 22 34.891 13.644 7.696 1.00 0.00 C ATOM 168 O GLU 22 35.581 14.115 8.696 1.00 0.00 O ATOM 169 CB GLU 22 36.947 12.429 6.801 1.00 0.00 C ATOM 170 CG GLU 22 36.623 11.055 7.428 1.00 0.00 C ATOM 171 CD GLU 22 37.809 10.144 7.645 1.00 0.00 C ATOM 172 OE1 GLU 22 37.669 9.047 8.218 1.00 0.00 O ATOM 173 OE2 GLU 22 38.846 10.644 7.210 1.00 0.00 O ATOM 174 N HIS 23 33.694 13.078 7.995 1.00 0.00 N ATOM 175 CA HIS 23 33.107 13.453 9.256 1.00 0.00 C ATOM 176 C HIS 23 33.867 13.138 10.552 1.00 0.00 C ATOM 177 O HIS 23 33.529 13.708 11.570 1.00 0.00 O ATOM 178 CB HIS 23 31.613 13.128 9.391 1.00 0.00 C ATOM 179 CG HIS 23 30.697 13.982 8.611 1.00 0.00 C ATOM 180 ND1 HIS 23 30.246 13.850 7.348 1.00 0.00 N ATOM 181 CD2 HIS 23 30.192 15.184 9.108 1.00 0.00 C ATOM 182 CE1 HIS 23 29.523 14.915 7.081 1.00 0.00 C ATOM 183 NE2 HIS 23 29.497 15.704 8.138 1.00 0.00 N ATOM 184 N GLY 24 34.939 12.338 10.545 1.00 0.00 N ATOM 185 CA GLY 24 35.584 12.067 11.809 1.00 0.00 C ATOM 186 C GLY 24 36.009 13.437 12.426 1.00 0.00 C ATOM 187 O GLY 24 35.609 13.677 13.568 1.00 0.00 O ATOM 188 N THR 25 36.887 14.139 11.834 1.00 0.00 N ATOM 189 CA THR 25 37.295 15.514 12.257 1.00 0.00 C ATOM 190 C THR 25 36.594 16.706 11.435 1.00 0.00 C ATOM 191 O THR 25 35.872 17.499 12.083 1.00 0.00 O ATOM 192 CB THR 25 38.862 15.623 12.097 1.00 0.00 C ATOM 193 OG1 THR 25 39.585 14.513 12.663 1.00 0.00 O ATOM 194 CG2 THR 25 39.453 16.953 12.732 1.00 0.00 C ATOM 195 N THR 26 36.535 16.663 10.034 1.00 0.00 N ATOM 196 CA THR 26 35.969 17.731 9.082 1.00 0.00 C ATOM 197 C THR 26 34.433 18.136 9.200 1.00 0.00 C ATOM 198 O THR 26 33.467 17.325 9.432 1.00 0.00 O ATOM 199 CB THR 26 35.823 17.341 7.603 1.00 0.00 C ATOM 200 OG1 THR 26 35.778 18.301 6.639 1.00 0.00 O ATOM 201 CG2 THR 26 34.707 16.211 7.285 1.00 0.00 C ATOM 202 N SER 27 34.472 19.231 9.819 1.00 0.00 N ATOM 203 CA SER 27 33.537 20.319 10.219 1.00 0.00 C ATOM 204 C SER 27 34.258 21.471 11.087 1.00 0.00 C ATOM 205 O SER 27 34.578 22.541 10.566 1.00 0.00 O ATOM 206 CB SER 27 32.326 19.741 10.888 1.00 0.00 C ATOM 207 OG SER 27 32.593 18.850 11.985 1.00 0.00 O ATOM 208 N GLY 28 34.435 21.201 12.413 1.00 0.00 N ATOM 209 CA GLY 28 35.039 22.038 13.499 1.00 0.00 C ATOM 210 C GLY 28 36.569 21.892 13.685 1.00 0.00 C ATOM 211 O GLY 28 37.009 22.245 14.765 1.00 0.00 O ATOM 212 N LYS 29 37.228 20.902 13.007 1.00 0.00 N ATOM 213 CA LYS 29 38.676 20.688 12.987 1.00 0.00 C ATOM 214 C LYS 29 39.119 20.714 11.501 1.00 0.00 C ATOM 215 O LYS 29 38.331 20.908 10.576 1.00 0.00 O ATOM 216 CB LYS 29 39.133 19.407 13.723 1.00 0.00 C ATOM 217 CG LYS 29 38.456 19.225 15.034 1.00 0.00 C ATOM 218 CD LYS 29 39.454 18.793 16.092 1.00 0.00 C ATOM 219 CE LYS 29 39.181 19.393 17.462 1.00 0.00 C ATOM 220 NZ LYS 29 40.127 18.927 18.489 1.00 0.00 N ATOM 221 N ARG 30 40.434 20.695 11.276 1.00 0.00 N ATOM 222 CA ARG 30 41.053 20.725 9.943 1.00 0.00 C ATOM 223 C ARG 30 41.095 19.350 9.298 1.00 0.00 C ATOM 224 O ARG 30 41.760 18.436 9.823 1.00 0.00 O ATOM 225 CB ARG 30 42.401 21.407 10.150 1.00 0.00 C ATOM 226 CG ARG 30 43.325 20.489 10.974 1.00 0.00 C ATOM 227 CD ARG 30 44.755 20.904 10.883 1.00 0.00 C ATOM 228 NE ARG 30 45.548 19.841 11.494 1.00 0.00 N ATOM 229 CZ ARG 30 46.784 20.045 11.929 1.00 0.00 C ATOM 230 NH1 ARG 30 47.339 21.246 11.828 1.00 0.00 H ATOM 231 NH2 ARG 30 47.456 19.021 12.460 1.00 0.00 H ATOM 232 N VAL 31 40.080 19.146 8.468 1.00 0.00 N ATOM 233 CA VAL 31 39.883 17.951 7.640 1.00 0.00 C ATOM 234 C VAL 31 39.364 18.186 6.185 1.00 0.00 C ATOM 235 O VAL 31 38.142 18.300 5.925 1.00 0.00 O ATOM 236 CB VAL 31 39.229 16.836 8.393 1.00 0.00 C ATOM 237 CG1 VAL 31 38.527 15.760 7.611 1.00 0.00 C ATOM 238 CG2 VAL 31 40.065 16.254 9.535 1.00 0.00 C ATOM 239 N VAL 32 40.283 17.821 5.383 1.00 0.00 N ATOM 240 CA VAL 32 40.168 17.819 3.966 1.00 0.00 C ATOM 241 C VAL 32 41.362 17.017 3.508 1.00 0.00 C ATOM 242 O VAL 32 42.492 17.500 3.692 1.00 0.00 O ATOM 243 CB VAL 32 40.121 19.223 3.368 1.00 0.00 C ATOM 244 CG1 VAL 32 40.185 19.142 1.825 1.00 0.00 C ATOM 245 CG2 VAL 32 38.831 19.959 3.716 1.00 0.00 C ATOM 246 N TYR 33 41.100 16.202 2.498 1.00 0.00 N ATOM 247 CA TYR 33 42.133 15.347 2.072 1.00 0.00 C ATOM 248 C TYR 33 42.489 15.710 0.638 1.00 0.00 C ATOM 249 O TYR 33 41.758 15.327 -0.335 1.00 0.00 O ATOM 250 CB TYR 33 41.489 13.911 2.052 1.00 0.00 C ATOM 251 CG TYR 33 41.689 13.143 3.304 1.00 0.00 C ATOM 252 CD1 TYR 33 42.286 13.711 4.438 1.00 0.00 C ATOM 253 CD2 TYR 33 41.207 11.829 3.361 1.00 0.00 C ATOM 254 CE1 TYR 33 42.392 12.959 5.621 1.00 0.00 C ATOM 255 CE2 TYR 33 41.321 11.068 4.527 1.00 0.00 C ATOM 256 CZ TYR 33 41.926 11.644 5.651 1.00 0.00 C ATOM 257 OH TYR 33 42.023 10.883 6.773 1.00 0.00 H ATOM 258 N VAL 34 43.573 16.451 0.466 1.00 0.00 N ATOM 259 CA VAL 34 43.972 16.730 -0.883 1.00 0.00 C ATOM 260 C VAL 34 45.316 16.040 -1.120 1.00 0.00 C ATOM 261 O VAL 34 46.241 16.149 -0.276 1.00 0.00 O ATOM 262 CB VAL 34 44.162 18.223 -0.956 1.00 0.00 C ATOM 263 CG1 VAL 34 42.924 19.089 -0.985 1.00 0.00 C ATOM 264 CG2 VAL 34 45.242 18.928 -0.179 1.00 0.00 C ATOM 265 N ASP 35 45.459 15.388 -2.268 1.00 0.00 N ATOM 266 CA ASP 35 46.662 14.611 -2.538 1.00 0.00 C ATOM 267 C ASP 35 46.795 13.501 -1.438 1.00 0.00 C ATOM 268 O ASP 35 47.802 13.475 -0.712 1.00 0.00 O ATOM 269 CB ASP 35 47.866 15.557 -2.628 1.00 0.00 C ATOM 270 CG ASP 35 48.145 16.107 -3.998 1.00 0.00 C ATOM 271 OD1 ASP 35 47.292 16.074 -4.906 1.00 0.00 O ATOM 272 OD2 ASP 35 49.276 16.619 -4.157 1.00 0.00 O ATOM 273 N GLY 36 45.701 12.734 -1.216 1.00 0.00 N ATOM 274 CA GLY 36 45.755 11.649 -0.304 1.00 0.00 C ATOM 275 C GLY 36 45.946 12.054 1.189 1.00 0.00 C ATOM 276 O GLY 36 46.992 11.658 1.718 1.00 0.00 O ATOM 277 N LYS 37 45.058 12.889 1.770 1.00 0.00 N ATOM 278 CA LYS 37 45.199 13.220 3.216 1.00 0.00 C ATOM 279 C LYS 37 46.633 13.634 3.431 1.00 0.00 C ATOM 280 O LYS 37 47.146 13.321 4.507 1.00 0.00 O ATOM 281 CB LYS 37 44.827 12.042 4.098 1.00 0.00 C ATOM 282 CG LYS 37 45.509 10.713 4.040 1.00 0.00 C ATOM 283 CD LYS 37 45.122 10.093 5.368 1.00 0.00 C ATOM 284 CE LYS 37 45.417 8.605 5.415 1.00 0.00 C ATOM 285 NZ LYS 37 45.266 8.140 6.785 1.00 0.00 N ATOM 286 N GLU 38 46.979 14.751 2.772 1.00 0.00 N ATOM 287 CA GLU 38 48.357 15.150 2.708 1.00 0.00 C ATOM 288 C GLU 38 48.923 15.207 4.086 1.00 0.00 C ATOM 289 O GLU 38 49.107 16.352 4.583 1.00 0.00 O ATOM 290 CB GLU 38 48.429 16.469 1.887 1.00 0.00 C ATOM 291 CG GLU 38 49.452 16.413 0.748 1.00 0.00 C ATOM 292 CD GLU 38 50.322 17.635 0.593 1.00 0.00 C ATOM 293 OE1 GLU 38 49.769 18.773 0.606 1.00 0.00 O ATOM 294 OE2 GLU 38 51.569 17.459 0.462 1.00 0.00 O ATOM 295 N GLU 39 49.762 14.166 4.328 1.00 0.00 N ATOM 296 CA GLU 39 50.423 14.082 5.563 1.00 0.00 C ATOM 297 C GLU 39 49.397 14.518 6.616 1.00 0.00 C ATOM 298 O GLU 39 48.736 13.603 7.153 1.00 0.00 O ATOM 299 CB GLU 39 51.700 14.820 5.442 1.00 0.00 C ATOM 300 CG GLU 39 52.073 16.229 5.276 1.00 0.00 C ATOM 301 CD GLU 39 53.352 16.830 5.844 1.00 0.00 C ATOM 302 OE1 GLU 39 54.327 16.208 6.102 1.00 0.00 O ATOM 303 OE2 GLU 39 53.222 18.061 6.082 1.00 0.00 O ATOM 304 N ILE 40 49.566 15.673 7.204 1.00 0.00 N ATOM 305 CA ILE 40 48.603 16.169 8.121 1.00 0.00 C ATOM 306 C ILE 40 47.148 16.178 7.499 1.00 0.00 C ATOM 307 O ILE 40 46.202 16.151 8.334 1.00 0.00 O ATOM 308 CB ILE 40 48.917 17.648 8.565 1.00 0.00 C ATOM 309 CG1 ILE 40 50.334 17.781 9.121 1.00 0.00 C ATOM 310 CG2 ILE 40 47.868 18.130 9.638 1.00 0.00 C ATOM 311 CD1 ILE 40 50.824 16.837 10.226 1.00 0.00 C ATOM 312 N ARG 41 46.908 15.897 6.219 1.00 0.00 N ATOM 313 CA ARG 41 45.531 15.994 5.756 1.00 0.00 C ATOM 314 C ARG 41 45.099 17.497 6.002 1.00 0.00 C ATOM 315 O ARG 41 44.652 17.890 7.038 1.00 0.00 O ATOM 316 CB ARG 41 44.702 14.962 6.534 1.00 0.00 C ATOM 317 CG ARG 41 43.227 15.453 6.843 1.00 0.00 C ATOM 318 CD ARG 41 42.556 14.545 7.826 1.00 0.00 C ATOM 319 NE ARG 41 42.849 14.668 9.252 1.00 0.00 N ATOM 320 CZ ARG 41 43.219 13.595 9.974 1.00 0.00 C ATOM 321 NH1 ARG 41 43.260 13.687 11.287 1.00 0.00 H ATOM 322 NH2 ARG 41 43.682 12.471 9.438 1.00 0.00 H ATOM 323 N LYS 42 45.497 18.290 5.013 1.00 0.00 N ATOM 324 CA LYS 42 45.451 19.776 4.942 1.00 0.00 C ATOM 325 C LYS 42 44.416 20.496 5.840 1.00 0.00 C ATOM 326 O LYS 42 43.218 20.422 5.619 1.00 0.00 O ATOM 327 CB LYS 42 45.392 20.115 3.489 1.00 0.00 C ATOM 328 CG LYS 42 46.391 19.778 2.426 1.00 0.00 C ATOM 329 CD LYS 42 47.845 19.920 2.869 1.00 0.00 C ATOM 330 CE LYS 42 48.276 21.369 3.049 1.00 0.00 C ATOM 331 NZ LYS 42 49.589 21.472 3.685 1.00 0.00 N ATOM 332 N GLU 43 45.050 21.536 6.436 1.00 0.00 N ATOM 333 CA GLU 43 44.592 22.487 7.445 1.00 0.00 C ATOM 334 C GLU 43 43.482 23.448 6.979 1.00 0.00 C ATOM 335 O GLU 43 43.789 24.326 6.154 1.00 0.00 O ATOM 336 CB GLU 43 45.874 23.247 7.903 1.00 0.00 C ATOM 337 CG GLU 43 45.486 24.466 8.802 1.00 0.00 C ATOM 338 CD GLU 43 46.312 24.509 10.074 1.00 0.00 C ATOM 339 OE1 GLU 43 47.555 24.563 9.970 1.00 0.00 O ATOM 340 OE2 GLU 43 45.715 24.487 11.170 1.00 0.00 O ATOM 341 N TRP 44 42.604 23.703 7.969 1.00 0.00 N ATOM 342 CA TRP 44 41.454 24.552 7.891 1.00 0.00 C ATOM 343 C TRP 44 41.261 25.194 9.307 1.00 0.00 C ATOM 344 O TRP 44 41.546 24.570 10.332 1.00 0.00 O ATOM 345 CB TRP 44 40.307 23.638 7.496 1.00 0.00 C ATOM 346 CG TRP 44 40.394 23.064 6.076 1.00 0.00 C ATOM 347 CD1 TRP 44 41.072 21.886 5.799 1.00 0.00 C ATOM 348 CD2 TRP 44 39.769 23.593 4.938 1.00 0.00 C ATOM 349 NE1 TRP 44 40.852 21.671 4.500 1.00 0.00 N ATOM 350 CE2 TRP 44 40.090 22.659 3.955 1.00 0.00 C ATOM 351 CE3 TRP 44 38.980 24.701 4.628 1.00 0.00 C ATOM 352 CZ2 TRP 44 39.615 22.843 2.646 1.00 0.00 C ATOM 353 CZ3 TRP 44 38.513 24.857 3.325 1.00 0.00 C ATOM 354 CH2 TRP 44 38.823 23.941 2.344 1.00 0.00 H ATOM 355 N MET 45 40.818 26.442 9.276 1.00 0.00 N ATOM 356 CA MET 45 40.721 27.244 10.494 1.00 0.00 C ATOM 357 C MET 45 39.795 26.649 11.603 1.00 0.00 C ATOM 358 O MET 45 39.798 27.257 12.676 1.00 0.00 O ATOM 359 CB MET 45 40.249 28.634 10.080 1.00 0.00 C ATOM 360 CG MET 45 41.289 29.508 9.411 1.00 0.00 C ATOM 361 SD MET 45 42.508 29.973 10.667 1.00 0.00 S ATOM 362 CE MET 45 44.013 29.529 9.865 1.00 0.00 C ATOM 363 N PHE 46 38.784 25.810 11.294 1.00 0.00 N ATOM 364 CA PHE 46 37.831 25.271 12.273 1.00 0.00 C ATOM 365 C PHE 46 37.065 26.456 12.993 1.00 0.00 C ATOM 366 O PHE 46 36.869 26.371 14.210 1.00 0.00 O ATOM 367 CB PHE 46 38.527 24.329 13.285 1.00 0.00 C ATOM 368 CG PHE 46 39.797 24.892 13.872 1.00 0.00 C ATOM 369 CD1 PHE 46 40.987 24.544 13.315 1.00 0.00 C ATOM 370 CD2 PHE 46 39.749 25.638 15.022 1.00 0.00 C ATOM 371 CE1 PHE 46 42.147 24.935 13.913 1.00 0.00 C ATOM 372 CE2 PHE 46 40.910 26.032 15.618 1.00 0.00 C ATOM 373 CZ PHE 46 42.112 25.675 15.059 1.00 0.00 C ATOM 374 N LYS 47 36.462 27.433 12.260 1.00 0.00 N ATOM 375 CA LYS 47 35.700 28.530 12.800 1.00 0.00 C ATOM 376 C LYS 47 34.439 28.097 13.588 1.00 0.00 C ATOM 377 O LYS 47 33.835 27.056 13.278 1.00 0.00 O ATOM 378 CB LYS 47 35.285 29.440 11.628 1.00 0.00 C ATOM 379 CG LYS 47 35.450 30.918 11.969 1.00 0.00 C ATOM 380 CD LYS 47 36.886 31.391 12.358 1.00 0.00 C ATOM 381 CE LYS 47 37.981 31.214 11.276 1.00 0.00 C ATOM 382 NZ LYS 47 39.294 31.636 11.740 1.00 0.00 N ATOM 383 N LEU 48 34.172 28.824 14.690 1.00 0.00 N ATOM 384 CA LEU 48 32.944 28.623 15.524 1.00 0.00 C ATOM 385 C LEU 48 31.766 29.452 14.879 1.00 0.00 C ATOM 386 O LEU 48 31.688 30.657 15.142 1.00 0.00 O ATOM 387 CB LEU 48 33.221 29.048 16.961 1.00 0.00 C ATOM 388 CG LEU 48 34.506 28.555 17.588 1.00 0.00 C ATOM 389 CD1 LEU 48 34.689 29.049 18.958 1.00 0.00 C ATOM 390 CD2 LEU 48 34.519 27.041 17.605 1.00 0.00 C ATOM 391 N VAL 49 31.443 28.930 13.744 1.00 0.00 N ATOM 392 CA VAL 49 30.418 29.306 12.750 1.00 0.00 C ATOM 393 C VAL 49 30.706 28.272 11.584 1.00 0.00 C ATOM 394 O VAL 49 31.878 27.889 11.399 1.00 0.00 O ATOM 395 CB VAL 49 30.486 30.773 12.318 1.00 0.00 C ATOM 396 CG1 VAL 49 29.743 31.046 11.007 1.00 0.00 C ATOM 397 CG2 VAL 49 29.904 31.706 13.325 1.00 0.00 C ATOM 398 N GLY 50 29.788 28.001 10.630 1.00 0.00 N ATOM 399 CA GLY 50 30.136 26.967 9.646 1.00 0.00 C ATOM 400 C GLY 50 31.244 27.578 8.772 1.00 0.00 C ATOM 401 O GLY 50 30.870 28.122 7.733 1.00 0.00 O ATOM 402 N LYS 51 32.456 27.030 8.825 1.00 0.00 N ATOM 403 CA LYS 51 33.572 27.462 7.959 1.00 0.00 C ATOM 404 C LYS 51 34.836 26.565 8.062 1.00 0.00 C ATOM 405 O LYS 51 35.253 26.176 9.162 1.00 0.00 O ATOM 406 CB LYS 51 34.041 28.948 8.170 1.00 0.00 C ATOM 407 CG LYS 51 32.853 29.909 8.293 1.00 0.00 C ATOM 408 CD LYS 51 33.294 31.337 7.917 1.00 0.00 C ATOM 409 CE LYS 51 32.198 32.386 8.170 1.00 0.00 C ATOM 410 NZ LYS 51 32.022 32.591 9.612 1.00 0.00 N ATOM 411 N GLU 52 35.592 26.665 7.008 1.00 0.00 N ATOM 412 CA GLU 52 36.885 26.045 6.807 1.00 0.00 C ATOM 413 C GLU 52 37.649 26.986 5.876 1.00 0.00 C ATOM 414 O GLU 52 37.423 26.911 4.674 1.00 0.00 O ATOM 415 CB GLU 52 36.669 24.682 6.266 1.00 0.00 C ATOM 416 CG GLU 52 36.475 23.559 7.221 1.00 0.00 C ATOM 417 CD GLU 52 35.061 23.136 7.199 1.00 0.00 C ATOM 418 OE1 GLU 52 34.279 24.076 6.772 1.00 0.00 O ATOM 419 OE2 GLU 52 34.677 22.057 7.511 1.00 0.00 O ATOM 420 N THR 53 38.849 27.318 6.279 1.00 0.00 N ATOM 421 CA THR 53 39.751 28.153 5.537 1.00 0.00 C ATOM 422 C THR 53 41.031 27.339 5.333 1.00 0.00 C ATOM 423 O THR 53 41.796 27.124 6.287 1.00 0.00 O ATOM 424 CB THR 53 40.015 29.428 6.345 1.00 0.00 C ATOM 425 OG1 THR 53 38.890 30.287 6.559 1.00 0.00 O ATOM 426 CG2 THR 53 41.103 30.332 5.641 1.00 0.00 C ATOM 427 N PHE 54 41.253 26.825 4.104 1.00 0.00 N ATOM 428 CA PHE 54 42.406 25.962 3.791 1.00 0.00 C ATOM 429 C PHE 54 43.301 26.495 2.676 1.00 0.00 C ATOM 430 O PHE 54 42.859 26.489 1.537 1.00 0.00 O ATOM 431 CB PHE 54 42.085 24.456 3.740 1.00 0.00 C ATOM 432 CG PHE 54 43.111 23.684 2.946 1.00 0.00 C ATOM 433 CD1 PHE 54 44.392 23.518 3.484 1.00 0.00 C ATOM 434 CD2 PHE 54 42.800 23.028 1.758 1.00 0.00 C ATOM 435 CE1 PHE 54 45.339 22.716 2.850 1.00 0.00 C ATOM 436 CE2 PHE 54 43.744 22.223 1.117 1.00 0.00 C ATOM 437 CZ PHE 54 45.014 22.069 1.664 1.00 0.00 C ATOM 438 N TYR 55 44.638 26.564 2.940 1.00 0.00 N ATOM 439 CA TYR 55 45.583 27.101 1.940 1.00 0.00 C ATOM 440 C TYR 55 46.286 25.994 1.101 1.00 0.00 C ATOM 441 O TYR 55 46.877 25.072 1.727 1.00 0.00 O ATOM 442 CB TYR 55 46.671 27.867 2.615 1.00 0.00 C ATOM 443 CG TYR 55 46.452 29.167 3.265 1.00 0.00 C ATOM 444 CD1 TYR 55 45.471 29.247 4.250 1.00 0.00 C ATOM 445 CD2 TYR 55 47.217 30.279 2.909 1.00 0.00 C ATOM 446 CE1 TYR 55 45.300 30.446 4.946 1.00 0.00 C ATOM 447 CE2 TYR 55 47.064 31.470 3.620 1.00 0.00 C ATOM 448 CZ TYR 55 46.113 31.549 4.647 1.00 0.00 C ATOM 449 OH TYR 55 45.993 32.696 5.363 1.00 0.00 H ATOM 450 N VAL 56 46.038 25.986 -0.191 1.00 0.00 N ATOM 451 CA VAL 56 46.732 25.046 -1.051 1.00 0.00 C ATOM 452 C VAL 56 47.791 25.755 -1.883 1.00 0.00 C ATOM 453 O VAL 56 47.408 26.372 -2.887 1.00 0.00 O ATOM 454 CB VAL 56 45.668 24.355 -1.965 1.00 0.00 C ATOM 455 CG1 VAL 56 46.321 23.177 -2.780 1.00 0.00 C ATOM 456 CG2 VAL 56 44.450 23.950 -0.988 1.00 0.00 C ATOM 457 N GLY 57 49.077 25.758 -1.490 1.00 0.00 N ATOM 458 CA GLY 57 50.143 26.315 -2.259 1.00 0.00 C ATOM 459 C GLY 57 49.675 27.703 -2.727 1.00 0.00 C ATOM 460 O GLY 57 49.391 28.580 -1.878 1.00 0.00 O ATOM 461 N ALA 58 50.168 28.017 -3.888 1.00 0.00 N ATOM 462 CA ALA 58 49.776 29.262 -4.583 1.00 0.00 C ATOM 463 C ALA 58 49.108 28.965 -5.952 1.00 0.00 C ATOM 464 O ALA 58 48.836 29.949 -6.662 1.00 0.00 O ATOM 465 CB ALA 58 51.000 30.176 -4.691 1.00 0.00 C ATOM 466 N ALA 59 49.093 27.707 -6.493 1.00 0.00 N ATOM 467 CA ALA 59 48.373 27.524 -7.751 1.00 0.00 C ATOM 468 C ALA 59 46.872 27.804 -7.438 1.00 0.00 C ATOM 469 O ALA 59 46.332 28.725 -8.063 1.00 0.00 O ATOM 470 CB ALA 59 48.671 26.143 -8.376 1.00 0.00 C ATOM 471 N LYS 60 46.100 26.883 -6.817 1.00 0.00 N ATOM 472 CA LYS 60 44.751 27.222 -6.393 1.00 0.00 C ATOM 473 C LYS 60 45.007 27.868 -4.977 1.00 0.00 C ATOM 474 O LYS 60 44.821 27.189 -3.953 1.00 0.00 O ATOM 475 CB LYS 60 43.752 26.046 -6.428 1.00 0.00 C ATOM 476 CG LYS 60 43.910 25.197 -7.692 1.00 0.00 C ATOM 477 CD LYS 60 43.332 25.879 -8.869 1.00 0.00 C ATOM 478 CE LYS 60 43.617 25.262 -10.243 1.00 0.00 C ATOM 479 NZ LYS 60 42.670 26.072 -11.138 1.00 0.00 N ATOM 480 N THR 61 45.566 29.111 -4.986 1.00 0.00 N ATOM 481 CA THR 61 45.961 29.793 -3.756 1.00 0.00 C ATOM 482 C THR 61 44.830 30.672 -3.088 1.00 0.00 C ATOM 483 O THR 61 45.196 31.648 -2.479 1.00 0.00 O ATOM 484 CB THR 61 47.242 30.695 -3.889 1.00 0.00 C ATOM 485 OG1 THR 61 47.649 31.242 -2.585 1.00 0.00 O ATOM 486 CG2 THR 61 47.041 31.838 -4.891 1.00 0.00 C ATOM 487 N LYS 62 43.873 29.952 -2.612 1.00 0.00 N ATOM 488 CA LYS 62 42.727 30.421 -1.789 1.00 0.00 C ATOM 489 C LYS 62 41.710 29.242 -1.790 1.00 0.00 C ATOM 490 O LYS 62 41.092 29.045 -2.870 1.00 0.00 O ATOM 491 CB LYS 62 42.033 31.652 -2.353 1.00 0.00 C ATOM 492 CG LYS 62 42.863 32.889 -2.216 1.00 0.00 C ATOM 493 CD LYS 62 41.956 33.928 -2.845 1.00 0.00 C ATOM 494 CE LYS 62 42.736 35.192 -3.168 1.00 0.00 C ATOM 495 NZ LYS 62 41.880 36.207 -3.771 1.00 0.00 N ATOM 496 N ALA 63 41.440 28.579 -0.700 1.00 0.00 N ATOM 497 CA ALA 63 40.556 27.422 -0.826 1.00 0.00 C ATOM 498 C ALA 63 39.696 27.299 0.430 1.00 0.00 C ATOM 499 O ALA 63 40.251 27.256 1.527 1.00 0.00 O ATOM 500 CB ALA 63 41.386 26.154 -1.113 1.00 0.00 C ATOM 501 N THR 64 38.431 26.936 0.243 1.00 0.00 N ATOM 502 CA THR 64 37.480 26.897 1.397 1.00 0.00 C ATOM 503 C THR 64 36.273 25.989 1.213 1.00 0.00 C ATOM 504 O THR 64 35.623 26.065 0.168 1.00 0.00 O ATOM 505 CB THR 64 36.936 28.347 1.600 1.00 0.00 C ATOM 506 OG1 THR 64 37.986 29.343 1.675 1.00 0.00 O ATOM 507 CG2 THR 64 36.020 28.448 2.925 1.00 0.00 C ATOM 508 N ILE 65 35.809 25.200 2.230 1.00 0.00 N ATOM 509 CA ILE 65 34.589 24.329 2.158 1.00 0.00 C ATOM 510 C ILE 65 33.486 25.138 2.953 1.00 0.00 C ATOM 511 O ILE 65 33.674 25.490 4.121 1.00 0.00 O ATOM 512 CB ILE 65 34.727 22.895 2.591 1.00 0.00 C ATOM 513 CG1 ILE 65 34.545 21.934 1.451 1.00 0.00 C ATOM 514 CG2 ILE 65 33.959 22.577 3.870 1.00 0.00 C ATOM 515 CD1 ILE 65 35.642 21.982 0.383 1.00 0.00 C ATOM 516 N ASN 66 32.498 25.639 2.256 1.00 0.00 N ATOM 517 CA ASN 66 31.361 26.355 2.789 1.00 0.00 C ATOM 518 C ASN 66 30.444 25.322 3.434 1.00 0.00 C ATOM 519 O ASN 66 29.593 24.752 2.681 1.00 0.00 O ATOM 520 CB ASN 66 30.721 27.134 1.649 1.00 0.00 C ATOM 521 CG ASN 66 29.398 27.718 2.064 1.00 0.00 C ATOM 522 OD1 ASN 66 28.380 27.644 1.360 1.00 0.00 O ATOM 523 ND2 ASN 66 29.347 28.308 3.262 1.00 0.00 N ATOM 524 N ILE 67 30.308 25.387 4.738 1.00 0.00 N ATOM 525 CA ILE 67 29.580 24.285 5.389 1.00 0.00 C ATOM 526 C ILE 67 28.227 24.839 6.006 1.00 0.00 C ATOM 527 O ILE 67 28.224 25.942 6.584 1.00 0.00 O ATOM 528 CB ILE 67 30.477 23.659 6.557 1.00 0.00 C ATOM 529 CG1 ILE 67 30.994 24.819 7.487 1.00 0.00 C ATOM 530 CG2 ILE 67 31.637 22.846 5.989 1.00 0.00 C ATOM 531 CD1 ILE 67 31.381 24.213 8.885 1.00 0.00 C ATOM 532 N ASP 68 27.164 24.278 5.439 1.00 0.00 N ATOM 533 CA ASP 68 25.799 24.642 5.757 1.00 0.00 C ATOM 534 C ASP 68 25.167 23.514 6.576 1.00 0.00 C ATOM 535 O ASP 68 24.817 22.475 5.997 1.00 0.00 O ATOM 536 CB ASP 68 25.020 24.930 4.480 1.00 0.00 C ATOM 537 CG ASP 68 25.577 25.993 3.575 1.00 0.00 C ATOM 538 OD1 ASP 68 25.635 27.179 3.900 1.00 0.00 O ATOM 539 OD2 ASP 68 25.916 25.583 2.456 1.00 0.00 O ATOM 540 N ALA 69 24.600 23.922 7.694 1.00 0.00 N ATOM 541 CA ALA 69 24.053 22.967 8.630 1.00 0.00 C ATOM 542 C ALA 69 22.563 23.175 8.857 1.00 0.00 C ATOM 543 O ALA 69 22.156 24.242 9.341 1.00 0.00 O ATOM 544 CB ALA 69 24.808 23.138 9.947 1.00 0.00 C ATOM 545 N ILE 70 21.786 22.153 8.521 1.00 0.00 N ATOM 546 CA ILE 70 20.388 22.274 8.820 1.00 0.00 C ATOM 547 C ILE 70 20.116 21.552 10.108 1.00 0.00 C ATOM 548 O ILE 70 19.978 20.319 10.107 1.00 0.00 O ATOM 549 CB ILE 70 19.535 21.730 7.645 1.00 0.00 C ATOM 550 CG1 ILE 70 19.777 22.375 6.271 1.00 0.00 C ATOM 551 CG2 ILE 70 18.016 21.871 7.944 1.00 0.00 C ATOM 552 CD1 ILE 70 19.094 21.727 5.051 1.00 0.00 C ATOM 553 N SER 71 20.286 22.253 11.239 1.00 0.00 N ATOM 554 CA SER 71 19.976 21.741 12.556 1.00 0.00 C ATOM 555 C SER 71 20.433 20.259 12.752 1.00 0.00 C ATOM 556 O SER 71 21.653 20.083 12.968 1.00 0.00 O ATOM 557 CB SER 71 18.514 21.972 12.767 1.00 0.00 C ATOM 558 OG SER 71 17.933 23.214 12.641 1.00 0.00 O ATOM 559 N GLY 72 19.483 19.339 13.007 1.00 0.00 N ATOM 560 CA GLY 72 19.825 17.991 13.190 1.00 0.00 C ATOM 561 C GLY 72 20.346 17.436 11.868 1.00 0.00 C ATOM 562 O GLY 72 19.565 17.293 10.914 1.00 0.00 O ATOM 563 N PHE 73 21.405 16.676 12.045 1.00 0.00 N ATOM 564 CA PHE 73 22.172 16.089 11.011 1.00 0.00 C ATOM 565 C PHE 73 22.230 17.173 9.876 1.00 0.00 C ATOM 566 O PHE 73 22.755 18.271 10.135 1.00 0.00 O ATOM 567 CB PHE 73 21.538 14.735 10.625 1.00 0.00 C ATOM 568 CG PHE 73 22.130 14.203 9.306 1.00 0.00 C ATOM 569 CD1 PHE 73 23.456 13.873 9.185 1.00 0.00 C ATOM 570 CD2 PHE 73 21.296 13.971 8.242 1.00 0.00 C ATOM 571 CE1 PHE 73 23.942 13.308 8.018 1.00 0.00 C ATOM 572 CE2 PHE 73 21.774 13.412 7.066 1.00 0.00 C ATOM 573 CZ PHE 73 23.098 13.080 6.955 1.00 0.00 C ATOM 574 N ALA 74 21.910 16.816 8.630 1.00 0.00 N ATOM 575 CA ALA 74 21.825 17.726 7.521 1.00 0.00 C ATOM 576 C ALA 74 23.048 18.684 7.368 1.00 0.00 C ATOM 577 O ALA 74 22.821 19.814 6.907 1.00 0.00 O ATOM 578 CB ALA 74 20.459 18.449 7.703 1.00 0.00 C ATOM 579 N TYR 75 24.285 18.219 7.395 1.00 0.00 N ATOM 580 CA TYR 75 25.429 19.077 7.197 1.00 0.00 C ATOM 581 C TYR 75 25.964 18.890 5.759 1.00 0.00 C ATOM 582 O TYR 75 26.625 17.880 5.490 1.00 0.00 O ATOM 583 CB TYR 75 26.421 18.672 8.262 1.00 0.00 C ATOM 584 CG TYR 75 25.983 18.824 9.676 1.00 0.00 C ATOM 585 CD1 TYR 75 25.816 20.107 10.211 1.00 0.00 C ATOM 586 CD2 TYR 75 25.648 17.725 10.463 1.00 0.00 C ATOM 587 CE1 TYR 75 25.350 20.296 11.499 1.00 0.00 C ATOM 588 CE2 TYR 75 25.181 17.906 11.754 1.00 0.00 C ATOM 589 CZ TYR 75 25.026 19.191 12.265 1.00 0.00 C ATOM 590 OH TYR 75 24.595 19.398 13.541 1.00 0.00 H ATOM 591 N GLU 76 25.761 19.890 4.910 1.00 0.00 N ATOM 592 CA GLU 76 26.235 19.883 3.509 1.00 0.00 C ATOM 593 C GLU 76 27.462 20.805 3.420 1.00 0.00 C ATOM 594 O GLU 76 27.285 22.030 3.465 1.00 0.00 O ATOM 595 CB GLU 76 25.146 20.302 2.484 1.00 0.00 C ATOM 596 CG GLU 76 25.730 20.347 1.041 1.00 0.00 C ATOM 597 CD GLU 76 25.607 21.616 0.269 1.00 0.00 C ATOM 598 OE1 GLU 76 25.633 22.738 0.747 1.00 0.00 O ATOM 599 OE2 GLU 76 25.501 21.400 -0.957 1.00 0.00 O ATOM 600 N TYR 77 28.540 20.302 2.850 1.00 0.00 N ATOM 601 CA TYR 77 29.755 21.063 2.805 1.00 0.00 C ATOM 602 C TYR 77 30.122 21.244 1.308 1.00 0.00 C ATOM 603 O TYR 77 30.204 20.212 0.576 1.00 0.00 O ATOM 604 CB TYR 77 30.857 20.217 3.500 1.00 0.00 C ATOM 605 CG TYR 77 30.507 19.828 4.870 1.00 0.00 C ATOM 606 CD1 TYR 77 30.104 20.745 5.847 1.00 0.00 C ATOM 607 CD2 TYR 77 30.513 18.481 5.203 1.00 0.00 C ATOM 608 CE1 TYR 77 29.751 20.325 7.132 1.00 0.00 C ATOM 609 CE2 TYR 77 30.162 18.040 6.477 1.00 0.00 C ATOM 610 CZ TYR 77 29.785 18.969 7.438 1.00 0.00 C ATOM 611 OH TYR 77 29.474 18.488 8.681 1.00 0.00 H ATOM 612 N THR 78 30.389 22.437 0.895 1.00 0.00 N ATOM 613 CA THR 78 30.646 22.689 -0.513 1.00 0.00 C ATOM 614 C THR 78 32.024 23.334 -0.725 1.00 0.00 C ATOM 615 O THR 78 32.181 24.534 -0.533 1.00 0.00 O ATOM 616 CB THR 78 29.589 23.678 -1.065 1.00 0.00 C ATOM 617 OG1 THR 78 28.901 24.457 -0.100 1.00 0.00 O ATOM 618 CG2 THR 78 28.920 23.141 -2.329 1.00 0.00 C ATOM 619 N LEU 79 32.903 22.574 -1.270 1.00 0.00 N ATOM 620 CA LEU 79 34.233 23.038 -1.625 1.00 0.00 C ATOM 621 C LEU 79 34.138 24.159 -2.681 1.00 0.00 C ATOM 622 O LEU 79 33.262 24.097 -3.564 1.00 0.00 O ATOM 623 CB LEU 79 35.028 21.880 -2.259 1.00 0.00 C ATOM 624 CG LEU 79 36.357 22.250 -2.914 1.00 0.00 C ATOM 625 CD1 LEU 79 37.265 22.986 -1.944 1.00 0.00 C ATOM 626 CD2 LEU 79 37.049 21.008 -3.461 1.00 0.00 C ATOM 627 N GLU 80 34.885 25.257 -2.470 1.00 0.00 N ATOM 628 CA GLU 80 35.017 26.400 -3.356 1.00 0.00 C ATOM 629 C GLU 80 36.517 26.764 -3.595 1.00 0.00 C ATOM 630 O GLU 80 37.215 27.111 -2.635 1.00 0.00 O ATOM 631 CB GLU 80 34.358 27.602 -2.797 1.00 0.00 C ATOM 632 CG GLU 80 33.179 28.343 -2.295 1.00 0.00 C ATOM 633 CD GLU 80 33.610 29.556 -1.464 1.00 0.00 C ATOM 634 OE1 GLU 80 33.854 30.676 -1.853 1.00 0.00 O ATOM 635 OE2 GLU 80 33.770 29.243 -0.171 1.00 0.00 O ATOM 636 N ILE 81 36.938 26.946 -4.852 1.00 0.00 N ATOM 637 CA ILE 81 38.291 27.382 -5.207 1.00 0.00 C ATOM 638 C ILE 81 38.248 28.747 -5.929 1.00 0.00 C ATOM 639 O ILE 81 37.831 28.796 -7.109 1.00 0.00 O ATOM 640 CB ILE 81 39.087 26.293 -6.003 1.00 0.00 C ATOM 641 CG1 ILE 81 39.321 25.004 -5.248 1.00 0.00 C ATOM 642 CG2 ILE 81 40.376 26.824 -6.661 1.00 0.00 C ATOM 643 CD1 ILE 81 39.393 23.745 -6.145 1.00 0.00 C ATOM 644 N ASN 82 39.051 29.680 -5.392 1.00 0.00 N ATOM 645 CA ASN 82 39.076 31.094 -5.873 1.00 0.00 C ATOM 646 C ASN 82 37.620 31.694 -5.978 1.00 0.00 C ATOM 647 O ASN 82 37.338 32.444 -6.926 1.00 0.00 O ATOM 648 CB ASN 82 39.836 31.140 -7.215 1.00 0.00 C ATOM 649 CG ASN 82 40.681 32.382 -7.408 1.00 0.00 C ATOM 650 OD1 ASN 82 40.167 33.480 -7.659 1.00 0.00 O ATOM 651 ND2 ASN 82 41.999 32.214 -7.295 1.00 0.00 N ATOM 652 N GLY 83 36.796 31.534 -4.921 1.00 0.00 N ATOM 653 CA GLY 83 35.377 31.962 -4.947 1.00 0.00 C ATOM 654 C GLY 83 34.568 31.244 -6.071 1.00 0.00 C ATOM 655 O GLY 83 33.653 31.882 -6.613 1.00 0.00 O ATOM 656 N LYS 84 34.834 29.967 -6.376 1.00 0.00 N ATOM 657 CA LYS 84 34.225 29.247 -7.449 1.00 0.00 C ATOM 658 C LYS 84 33.634 27.950 -6.895 1.00 0.00 C ATOM 659 O LYS 84 34.370 27.017 -6.543 1.00 0.00 O ATOM 660 CB LYS 84 35.238 28.902 -8.519 1.00 0.00 C ATOM 661 CG LYS 84 34.944 29.531 -9.844 1.00 0.00 C ATOM 662 CD LYS 84 35.412 30.936 -9.869 1.00 0.00 C ATOM 663 CE LYS 84 34.842 31.444 -11.146 1.00 0.00 C ATOM 664 NZ LYS 84 35.220 32.828 -11.271 1.00 0.00 N ATOM 665 N SER 85 32.343 27.797 -7.145 1.00 0.00 N ATOM 666 CA SER 85 31.552 26.653 -6.709 1.00 0.00 C ATOM 667 C SER 85 32.132 25.346 -7.258 1.00 0.00 C ATOM 668 O SER 85 32.402 25.244 -8.483 1.00 0.00 O ATOM 669 CB SER 85 30.127 26.869 -7.212 1.00 0.00 C ATOM 670 OG SER 85 29.718 28.183 -7.529 1.00 0.00 O ATOM 671 N LEU 86 32.159 24.321 -6.418 1.00 0.00 N ATOM 672 CA LEU 86 32.757 23.070 -6.844 1.00 0.00 C ATOM 673 C LEU 86 31.758 21.895 -6.667 1.00 0.00 C ATOM 674 O LEU 86 31.420 21.548 -5.529 1.00 0.00 O ATOM 675 CB LEU 86 34.156 22.831 -6.285 1.00 0.00 C ATOM 676 CG LEU 86 35.207 23.864 -6.435 1.00 0.00 C ATOM 677 CD1 LEU 86 36.263 23.697 -5.375 1.00 0.00 C ATOM 678 CD2 LEU 86 35.670 23.796 -7.887 1.00 0.00 C ATOM 679 N LYS 87 31.759 21.062 -7.724 1.00 0.00 N ATOM 680 CA LYS 87 30.840 19.952 -7.842 1.00 0.00 C ATOM 681 C LYS 87 31.329 18.743 -7.004 1.00 0.00 C ATOM 682 O LYS 87 32.310 18.075 -7.362 1.00 0.00 O ATOM 683 CB LYS 87 30.690 19.621 -9.341 1.00 0.00 C ATOM 684 CG LYS 87 29.367 18.904 -9.638 1.00 0.00 C ATOM 685 CD LYS 87 29.143 18.791 -11.137 1.00 0.00 C ATOM 686 CE LYS 87 29.021 17.341 -11.576 1.00 0.00 C ATOM 687 NZ LYS 87 30.261 16.567 -11.287 1.00 0.00 N ATOM 688 N LYS 88 30.480 18.325 -6.079 1.00 0.00 N ATOM 689 CA LYS 88 30.675 17.143 -5.241 1.00 0.00 C ATOM 690 C LYS 88 30.407 15.878 -6.078 1.00 0.00 C ATOM 691 O LYS 88 29.615 15.886 -7.038 1.00 0.00 O ATOM 692 CB LYS 88 29.684 17.254 -4.034 1.00 0.00 C ATOM 693 CG LYS 88 30.054 16.366 -2.850 1.00 0.00 C ATOM 694 CD LYS 88 29.041 16.628 -1.733 1.00 0.00 C ATOM 695 CE LYS 88 29.409 15.906 -0.467 1.00 0.00 C ATOM 696 NZ LYS 88 28.358 16.056 0.562 1.00 0.00 N ATOM 697 N TYR 89 31.111 14.808 -5.756 1.00 0.00 N ATOM 698 CA TYR 89 30.885 13.509 -6.395 1.00 0.00 C ATOM 699 C TYR 89 29.426 12.971 -6.156 1.00 0.00 C ATOM 700 O TYR 89 29.041 12.065 -6.891 1.00 0.00 O ATOM 701 CB TYR 89 31.936 12.531 -5.812 1.00 0.00 C ATOM 702 CG TYR 89 32.195 11.412 -6.814 1.00 0.00 C ATOM 703 CD1 TYR 89 31.251 10.422 -6.917 1.00 0.00 C ATOM 704 CD2 TYR 89 33.328 11.406 -7.612 1.00 0.00 C ATOM 705 CE1 TYR 89 31.406 9.407 -7.806 1.00 0.00 C ATOM 706 CE2 TYR 89 33.499 10.379 -8.517 1.00 0.00 C ATOM 707 CZ TYR 89 32.522 9.387 -8.590 1.00 0.00 C ATOM 708 OH TYR 89 32.651 8.270 -9.411 1.00 0.00 H ATOM 709 N MET 90 28.569 13.602 -5.318 1.00 0.00 N ATOM 710 CA MET 90 27.173 13.229 -5.076 1.00 0.00 C ATOM 711 C MET 90 26.296 14.131 -5.977 1.00 0.00 C ATOM 712 O MET 90 25.701 13.673 -6.949 1.00 0.00 O ATOM 713 CB MET 90 26.745 13.423 -3.621 1.00 0.00 C ATOM 714 CG MET 90 27.404 12.445 -2.706 1.00 0.00 C ATOM 715 SD MET 90 26.903 12.800 -0.999 1.00 0.00 S ATOM 716 CE MET 90 25.356 11.955 -1.072 1.00 0.00 C ATOM 717 OXT MET 90 26.221 15.344 -5.671 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 67.09 55.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 55.50 63.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 72.67 52.8 108 100.0 108 ARMSMC BURIED . . . . . . . . 57.43 58.6 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.01 36.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 86.25 34.8 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 79.99 36.5 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 92.19 31.8 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 73.63 41.9 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.16 45.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 67.75 50.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 72.66 48.7 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 69.39 39.4 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 71.29 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.38 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 72.38 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 61.87 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 75.94 38.9 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 60.45 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.98 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 73.98 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 84.31 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 80.19 36.4 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 14.48 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.73 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.73 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0525 CRMSCA SECONDARY STRUCTURE . . 2.97 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.49 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.19 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.78 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.09 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.51 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.34 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.13 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 7.32 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.90 252 100.0 252 CRMSSC SURFACE . . . . . . . . 8.51 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.68 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.98 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.08 488 100.0 488 CRMSALL SURFACE . . . . . . . . 7.01 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.06 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.804 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.502 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.575 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.592 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.826 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.583 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.551 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.699 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.650 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.778 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.922 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 7.118 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.680 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.663 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.231 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.684 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.181 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 35 46 66 88 90 90 DISTCA CA (P) 1.11 38.89 51.11 73.33 97.78 90 DISTCA CA (RMS) 0.51 1.50 1.76 2.54 4.45 DISTCA ALL (N) 19 224 326 476 634 716 716 DISTALL ALL (P) 2.65 31.28 45.53 66.48 88.55 716 DISTALL ALL (RMS) 0.86 1.51 1.84 2.66 4.36 DISTALL END of the results output