####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 66 ( 512), selected 66 , name T0540TS301_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 66 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS301_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 66 5 - 87 3.04 3.04 LCS_AVERAGE: 73.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 32 - 86 1.98 3.14 LCS_AVERAGE: 36.87 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 32 - 56 0.92 3.86 LCS_AVERAGE: 11.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 66 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 5 V 5 8 20 66 5 21 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT A 6 A 6 8 20 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT V 7 V 7 8 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT W 8 W 8 8 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT D 9 D 9 8 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT V 10 V 10 8 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT A 11 A 11 8 20 66 7 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT L 12 L 12 8 20 66 4 10 25 44 53 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT S 13 S 13 6 20 66 3 6 11 18 26 42 50 57 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT D 14 D 14 10 20 66 9 24 39 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 15 G 15 10 20 66 5 23 37 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT V 16 V 16 10 20 66 9 26 39 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT H 17 H 17 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 18 K 18 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT I 19 I 19 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 20 E 20 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT F 21 F 21 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 22 E 22 10 20 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT H 23 H 23 10 20 66 7 25 45 50 53 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 24 G 24 5 20 66 3 4 13 43 53 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT T 25 T 25 3 4 66 3 4 5 5 5 8 12 25 40 48 60 62 63 64 64 64 65 65 66 66 LCS_GDT T 26 T 26 3 4 66 3 3 3 3 4 4 5 5 5 6 13 21 39 43 50 62 65 65 66 66 LCS_GDT S 27 S 27 3 4 66 3 3 3 3 4 4 5 6 6 10 15 17 32 36 48 54 64 64 66 66 LCS_GDT V 32 V 32 14 42 66 8 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT Y 33 Y 33 14 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT V 34 V 34 14 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT D 35 D 35 14 42 66 6 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 36 G 36 14 42 66 6 31 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 37 K 37 14 42 66 5 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 38 E 38 14 42 66 6 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 50 G 50 14 42 66 8 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 51 K 51 14 42 66 6 30 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 52 E 52 14 42 66 5 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT T 53 T 53 14 42 66 5 26 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT F 54 F 54 14 42 66 4 24 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT Y 55 Y 55 14 42 66 5 16 37 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT V 56 V 56 14 42 66 5 16 37 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 57 G 57 11 42 66 4 7 15 31 46 53 57 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 60 K 60 10 42 66 2 6 27 46 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT T 61 T 61 10 42 66 6 23 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 62 K 62 10 42 66 6 26 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT A 63 A 63 10 42 66 5 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT T 64 T 64 10 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT I 65 I 65 10 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT N 66 N 66 10 42 66 4 24 42 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT I 67 I 67 10 42 66 4 24 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT D 68 D 68 10 42 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT A 69 A 69 10 42 66 6 31 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT I 70 I 70 7 42 66 4 21 42 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT S 71 S 71 7 42 66 4 10 19 46 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 72 G 72 7 42 66 3 5 6 9 13 27 40 55 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT F 73 F 73 7 42 66 4 6 9 18 29 47 56 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT A 74 A 74 13 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT Y 75 Y 75 13 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 76 E 76 13 42 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT Y 77 Y 77 13 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT T 78 T 78 13 42 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT L 79 L 79 13 42 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT E 80 E 80 13 42 66 9 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT I 81 I 81 13 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT N 82 N 82 13 42 66 5 26 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT G 83 G 83 13 42 66 5 25 43 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 84 K 84 13 42 66 13 26 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT S 85 S 85 13 42 66 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT L 86 L 86 13 42 66 3 8 27 48 53 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 LCS_GDT K 87 K 87 4 14 66 3 4 7 9 23 36 49 56 59 60 61 62 63 64 64 64 65 65 66 66 LCS_AVERAGE LCS_A: 40.62 ( 11.65 36.87 73.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 33 45 50 54 57 58 59 60 61 62 62 63 64 64 64 65 65 66 66 GDT PERCENT_AT 15.56 36.67 50.00 55.56 60.00 63.33 64.44 65.56 66.67 67.78 68.89 68.89 70.00 71.11 71.11 71.11 72.22 72.22 73.33 73.33 GDT RMS_LOCAL 0.27 0.69 0.95 1.09 1.33 1.42 1.48 1.60 1.75 1.87 2.02 2.00 2.15 2.36 2.36 2.36 2.70 2.70 3.04 3.04 GDT RMS_ALL_AT 3.18 3.17 3.19 3.16 3.12 3.12 3.11 3.12 3.10 3.11 3.10 3.11 3.09 3.07 3.07 3.07 3.05 3.05 3.04 3.04 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 38 E 38 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 5 V 5 1.630 0 0.641 1.022 5.894 70.952 51.156 LGA A 6 A 6 0.611 0 0.049 0.059 0.757 90.476 90.476 LGA V 7 V 7 0.790 0 0.067 1.088 3.175 90.476 79.932 LGA W 8 W 8 0.652 0 0.023 0.144 0.996 90.476 91.837 LGA D 9 D 9 0.818 0 0.086 0.983 3.801 90.476 76.310 LGA V 10 V 10 0.550 0 0.108 1.161 3.137 92.857 83.537 LGA A 11 A 11 0.737 0 0.185 0.182 1.769 83.810 85.143 LGA L 12 L 12 2.865 0 0.071 1.017 4.602 47.619 54.881 LGA S 13 S 13 5.582 0 0.262 0.570 7.714 30.476 23.175 LGA D 14 D 14 2.485 0 0.072 1.205 4.822 57.262 47.381 LGA G 15 G 15 2.320 0 0.079 0.079 2.320 66.786 66.786 LGA V 16 V 16 2.069 0 0.295 1.251 3.679 61.071 58.503 LGA H 17 H 17 0.894 0 0.133 1.233 5.410 90.476 64.095 LGA K 18 K 18 0.912 0 0.067 0.873 2.968 88.214 82.910 LGA I 19 I 19 0.919 0 0.039 0.151 0.919 90.476 91.667 LGA E 20 E 20 0.906 0 0.035 0.771 3.917 90.476 70.794 LGA F 21 F 21 0.863 0 0.126 0.475 1.692 90.476 84.805 LGA E 22 E 22 0.803 0 0.033 0.673 3.177 85.952 78.307 LGA H 23 H 23 1.777 0 0.637 1.209 9.788 77.143 39.810 LGA G 24 G 24 3.344 0 0.575 0.575 4.660 43.929 43.929 LGA T 25 T 25 8.204 0 0.158 0.142 12.159 4.881 2.789 LGA T 26 T 26 11.083 0 0.383 1.313 13.336 0.357 0.204 LGA S 27 S 27 12.240 0 0.681 0.591 12.844 0.000 0.000 LGA V 32 V 32 1.189 0 0.042 0.096 1.839 81.429 77.755 LGA Y 33 Y 33 1.005 0 0.095 0.177 1.600 81.429 80.714 LGA V 34 V 34 0.907 0 0.025 1.083 2.833 95.238 85.850 LGA D 35 D 35 0.762 0 0.054 0.872 3.985 88.214 74.226 LGA G 36 G 36 0.987 0 0.249 0.249 2.016 81.786 81.786 LGA K 37 K 37 0.664 0 0.085 0.202 1.479 92.857 89.524 LGA E 38 E 38 0.679 0 0.107 1.090 5.323 88.214 74.127 LGA G 50 G 50 1.149 0 0.296 0.296 1.149 85.952 85.952 LGA K 51 K 51 1.300 0 0.278 0.998 3.816 81.548 70.212 LGA E 52 E 52 1.323 0 0.160 0.677 2.763 85.952 74.233 LGA T 53 T 53 1.337 0 0.150 0.197 2.001 81.429 77.823 LGA F 54 F 54 1.399 0 0.190 0.309 1.690 81.429 79.870 LGA Y 55 Y 55 2.328 0 0.043 0.231 2.828 64.762 61.587 LGA V 56 V 56 2.513 0 0.126 0.141 2.971 59.048 62.653 LGA G 57 G 57 4.666 0 0.210 0.210 5.025 33.095 33.095 LGA K 60 K 60 2.792 0 0.115 0.793 10.673 63.333 37.672 LGA T 61 T 61 1.486 0 0.144 1.130 2.737 71.071 69.660 LGA K 62 K 62 1.120 0 0.204 0.680 5.212 79.524 62.116 LGA A 63 A 63 0.836 0 0.111 0.180 1.026 88.214 88.667 LGA T 64 T 64 0.575 0 0.052 1.001 2.197 92.857 84.490 LGA I 65 I 65 0.710 0 0.077 0.192 1.195 88.333 89.405 LGA N 66 N 66 1.877 0 0.186 0.915 3.410 75.000 65.238 LGA I 67 I 67 1.635 0 0.091 0.515 3.329 70.833 68.988 LGA D 68 D 68 0.975 0 0.103 0.968 3.627 90.476 73.393 LGA A 69 A 69 0.965 0 0.014 0.018 1.882 85.952 83.333 LGA I 70 I 70 1.722 0 0.109 1.089 3.709 75.119 64.583 LGA S 71 S 71 3.446 0 0.183 0.627 7.103 34.048 29.286 LGA G 72 G 72 7.172 0 0.324 0.324 9.687 10.952 10.952 LGA F 73 F 73 6.012 0 0.434 1.098 8.444 19.286 15.108 LGA A 74 A 74 0.415 0 0.198 0.250 1.007 95.357 94.381 LGA Y 75 Y 75 0.191 0 0.033 0.692 2.414 97.619 87.897 LGA E 76 E 76 0.569 0 0.091 0.831 3.953 95.238 73.862 LGA Y 77 Y 77 0.181 0 0.066 0.158 3.360 95.238 75.278 LGA T 78 T 78 0.902 0 0.085 0.521 2.703 88.214 84.490 LGA L 79 L 79 0.687 0 0.036 0.180 0.787 90.476 91.667 LGA E 80 E 80 0.839 0 0.020 0.825 4.336 90.476 75.185 LGA I 81 I 81 0.713 0 0.096 0.104 1.025 88.214 89.345 LGA N 82 N 82 1.402 0 0.020 0.809 2.983 77.143 73.095 LGA G 83 G 83 1.686 0 0.225 0.225 1.686 75.000 75.000 LGA K 84 K 84 1.210 0 0.133 1.113 3.676 85.952 71.270 LGA S 85 S 85 0.766 0 0.069 0.686 2.579 77.738 76.190 LGA L 86 L 86 2.861 0 0.021 1.096 7.895 61.190 42.083 LGA K 87 K 87 5.892 0 0.013 0.727 12.404 25.119 12.011 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 66 264 264 100.00 512 512 100.00 90 SUMMARY(RMSD_GDC): 3.044 3.140 3.593 53.394 48.250 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 66 90 4.0 59 1.60 57.222 54.758 3.480 LGA_LOCAL RMSD: 1.596 Number of atoms: 59 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.123 Number of assigned atoms: 66 Std_ASGN_ATOMS RMSD: 3.044 Standard rmsd on all 66 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.324671 * X + 0.903278 * Y + 0.280494 * Z + 37.542568 Y_new = -0.144761 * X + -0.340522 * Y + 0.929026 * Z + 21.540321 Z_new = 0.934683 * X + 0.261023 * Y + 0.241317 * Z + 0.180694 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.722178 -1.207367 0.824606 [DEG: -155.9693 -69.1770 47.2465 ] ZXZ: 2.848373 1.327073 1.298470 [DEG: 163.1998 76.0357 74.3969 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS301_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS301_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 66 90 4.0 59 1.60 54.758 3.04 REMARK ---------------------------------------------------------- MOLECULE T0540TS301_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 2 N VAL 5 31.116 11.669 4.793 1.00 0.00 N ATOM 3 CA VAL 5 32.333 12.017 4.073 1.00 0.00 C ATOM 4 CB VAL 5 33.224 10.781 3.842 1.00 0.00 C ATOM 5 CG1 VAL 5 34.412 11.140 2.962 1.00 0.00 C ATOM 6 CG2 VAL 5 33.693 10.209 5.169 1.00 0.00 C ATOM 7 O VAL 5 31.237 12.141 1.941 1.00 0.00 O ATOM 8 C VAL 5 32.011 12.675 2.735 1.00 0.00 C ATOM 9 N ALA 6 32.608 13.838 2.493 1.00 0.00 N ATOM 10 CA ALA 6 32.382 14.570 1.253 1.00 0.00 C ATOM 11 CB ALA 6 32.067 16.030 1.550 1.00 0.00 C ATOM 12 O ALA 6 34.723 14.294 0.790 1.00 0.00 O ATOM 13 C ALA 6 33.594 14.468 0.333 1.00 0.00 C ATOM 14 N VAL 7 33.350 14.577 -0.971 1.00 0.00 N ATOM 15 CA VAL 7 34.420 14.497 -1.957 1.00 0.00 C ATOM 16 CB VAL 7 34.543 13.078 -2.543 1.00 0.00 C ATOM 17 CG1 VAL 7 34.905 12.081 -1.454 1.00 0.00 C ATOM 18 CG2 VAL 7 33.249 12.672 -3.231 1.00 0.00 C ATOM 19 O VAL 7 33.079 15.909 -3.357 1.00 0.00 O ATOM 20 C VAL 7 34.207 15.502 -3.081 1.00 0.00 C ATOM 21 N TRP 8 35.298 15.896 -3.731 1.00 0.00 N ATOM 22 CA TRP 8 35.227 16.854 -4.829 1.00 0.00 C ATOM 23 CB TRP 8 35.275 18.287 -4.294 1.00 0.00 C ATOM 24 CG TRP 8 34.163 18.609 -3.345 1.00 0.00 C ATOM 25 CD1 TRP 8 32.870 18.910 -3.667 1.00 0.00 C ATOM 26 CD2 TRP 8 34.242 18.666 -1.915 1.00 0.00 C ATOM 27 CE2 TRP 8 32.963 19.005 -1.440 1.00 0.00 C ATOM 28 CE3 TRP 8 35.273 18.462 -0.991 1.00 0.00 C ATOM 29 NE1 TRP 8 32.142 19.150 -2.530 1.00 0.00 N ATOM 30 CZ2 TRP 8 32.685 19.145 -0.081 1.00 0.00 C ATOM 31 CZ3 TRP 8 34.992 18.602 0.356 1.00 0.00 C ATOM 32 CH2 TRP 8 33.709 18.940 0.800 1.00 0.00 H ATOM 33 O TRP 8 37.523 16.498 -5.435 1.00 0.00 O ATOM 34 C TRP 8 36.362 16.626 -5.823 1.00 0.00 C ATOM 35 N ASP 9 36.017 16.574 -7.106 1.00 0.00 N ATOM 36 CA ASP 9 37.006 16.362 -8.156 1.00 0.00 C ATOM 37 CB ASP 9 36.628 15.153 -9.011 1.00 0.00 C ATOM 38 CG ASP 9 37.665 14.841 -10.073 1.00 0.00 C ATOM 39 OD1 ASP 9 38.588 15.662 -10.259 1.00 0.00 O ATOM 40 OD2 ASP 9 37.554 13.779 -10.719 1.00 0.00 O ATOM 41 O ASP 9 36.218 17.988 -9.736 1.00 0.00 O ATOM 42 C ASP 9 37.150 17.600 -9.032 1.00 0.00 C ATOM 43 N VAL 10 38.326 18.216 -8.985 1.00 0.00 N ATOM 44 CA VAL 10 38.595 19.413 -9.776 1.00 0.00 C ATOM 45 CB VAL 10 38.411 20.694 -8.942 1.00 0.00 C ATOM 46 CG1 VAL 10 39.409 20.731 -7.795 1.00 0.00 C ATOM 47 CG2 VAL 10 38.558 21.927 -9.820 1.00 0.00 C ATOM 48 O VAL 10 40.929 18.852 -9.743 1.00 0.00 O ATOM 49 C VAL 10 40.003 19.373 -10.363 1.00 0.00 C ATOM 50 N ALA 11 40.154 19.928 -11.561 1.00 0.00 N ATOM 51 CA ALA 11 41.450 19.955 -12.232 1.00 0.00 C ATOM 52 CB ALA 11 41.274 20.263 -13.711 1.00 0.00 C ATOM 53 O ALA 11 42.354 22.162 -11.936 1.00 0.00 O ATOM 54 C ALA 11 42.374 20.981 -11.583 1.00 0.00 C ATOM 55 N LEU 12 43.183 20.523 -10.635 1.00 0.00 N ATOM 56 CA LEU 12 44.117 21.400 -9.937 1.00 0.00 C ATOM 57 CB LEU 12 43.694 21.579 -8.477 1.00 0.00 C ATOM 58 CG LEU 12 43.980 22.945 -7.851 1.00 0.00 C ATOM 59 CD1 LEU 12 42.816 23.391 -6.980 1.00 0.00 C ATOM 60 CD2 LEU 12 45.265 22.905 -7.038 1.00 0.00 C ATOM 61 O LEU 12 45.743 19.644 -10.131 1.00 0.00 O ATOM 62 C LEU 12 45.538 20.851 -10.010 1.00 0.00 C ATOM 63 N SER 13 46.517 21.746 -9.933 1.00 0.00 N ATOM 64 CA SER 13 47.919 21.352 -9.988 1.00 0.00 C ATOM 65 CB SER 13 48.241 20.362 -8.866 1.00 0.00 C ATOM 66 OG SER 13 48.008 20.937 -7.594 1.00 0.00 O ATOM 67 O SER 13 49.296 20.096 -11.501 1.00 0.00 O ATOM 68 C SER 13 48.262 20.743 -11.343 1.00 0.00 C ATOM 69 N ASP 14 47.383 20.952 -12.319 1.00 0.00 N ATOM 70 CA ASP 14 47.608 20.414 -13.649 1.00 0.00 C ATOM 71 CB ASP 14 49.100 20.438 -13.989 1.00 0.00 C ATOM 72 CG ASP 14 49.661 21.844 -14.058 1.00 0.00 C ATOM 73 OD1 ASP 14 48.947 22.745 -14.548 1.00 0.00 O ATOM 74 OD2 ASP 14 50.813 22.048 -13.622 1.00 0.00 O ATOM 75 O ASP 14 47.221 18.392 -14.860 1.00 0.00 O ATOM 76 C ASP 14 47.080 19.002 -13.800 1.00 0.00 C ATOM 77 N GLY 15 46.474 18.481 -12.738 1.00 0.00 N ATOM 78 CA GLY 15 45.926 17.130 -12.758 1.00 0.00 C ATOM 79 O GLY 15 44.160 18.053 -11.416 1.00 0.00 O ATOM 80 C GLY 15 44.586 17.075 -12.033 1.00 0.00 C ATOM 81 N VAL 16 43.924 15.926 -12.110 1.00 0.00 N ATOM 82 CA VAL 16 42.632 15.742 -11.460 1.00 0.00 C ATOM 83 CB VAL 16 41.935 14.456 -11.944 1.00 0.00 C ATOM 84 CG1 VAL 16 40.612 14.264 -11.218 1.00 0.00 C ATOM 85 CG2 VAL 16 41.721 14.500 -13.447 1.00 0.00 C ATOM 86 O VAL 16 42.945 14.644 -9.346 1.00 0.00 O ATOM 87 C VAL 16 42.786 15.711 -9.942 1.00 0.00 C ATOM 88 N HIS 17 42.739 16.885 -9.324 1.00 0.00 N ATOM 89 CA HIS 17 42.874 16.993 -7.876 1.00 0.00 C ATOM 90 CB HIS 17 43.102 18.449 -7.465 1.00 0.00 C ATOM 91 CG HIS 17 43.442 18.622 -6.016 1.00 0.00 C ATOM 92 CD2 HIS 17 42.875 19.363 -4.899 1.00 0.00 C ATOM 93 ND1 HIS 17 44.524 18.005 -5.427 1.00 0.00 N ATOM 94 CE1 HIS 17 44.569 18.350 -4.128 1.00 0.00 C ATOM 95 NE2 HIS 17 43.584 19.164 -3.804 1.00 0.00 N ATOM 96 O HIS 17 40.515 16.834 -7.459 1.00 0.00 O ATOM 97 C HIS 17 41.642 16.434 -7.171 1.00 0.00 C ATOM 98 N LYS 18 41.867 15.510 -6.242 1.00 0.00 N ATOM 99 CA LYS 18 40.774 14.899 -5.493 1.00 0.00 C ATOM 100 CB LYS 18 40.888 13.373 -5.529 1.00 0.00 C ATOM 101 CG LYS 18 39.760 12.649 -4.814 1.00 0.00 C ATOM 102 CD LYS 18 39.931 11.140 -4.898 1.00 0.00 C ATOM 103 CE LYS 18 38.815 10.417 -4.162 1.00 0.00 C ATOM 104 NZ LYS 18 38.983 8.938 -4.216 1.00 0.00 N ATOM 105 O LYS 18 41.701 15.158 -3.293 1.00 0.00 O ATOM 106 C LYS 18 40.759 15.393 -4.050 1.00 0.00 C ATOM 107 N ILE 19 39.683 16.077 -3.676 1.00 0.00 N ATOM 108 CA ILE 19 39.545 16.605 -2.324 1.00 0.00 C ATOM 109 CB ILE 19 39.216 18.110 -2.336 1.00 0.00 C ATOM 110 CG1 ILE 19 40.350 18.898 -2.993 1.00 0.00 C ATOM 111 CG2 ILE 19 38.925 18.601 -0.927 1.00 0.00 C ATOM 112 CD1 ILE 19 40.006 20.345 -3.274 1.00 0.00 C ATOM 113 O ILE 19 37.426 15.503 -2.086 1.00 0.00 O ATOM 114 C ILE 19 38.476 15.847 -1.544 1.00 0.00 C ATOM 115 N GLU 20 38.751 15.591 -0.269 1.00 0.00 N ATOM 116 CA GLU 20 37.812 14.874 0.586 1.00 0.00 C ATOM 117 CB GLU 20 38.245 13.416 0.752 1.00 0.00 C ATOM 118 CG GLU 20 37.283 12.573 1.572 1.00 0.00 C ATOM 119 CD GLU 20 37.703 11.119 1.651 1.00 0.00 C ATOM 120 OE1 GLU 20 38.260 10.607 0.657 1.00 0.00 O ATOM 121 OE2 GLU 20 37.476 10.492 2.708 1.00 0.00 O ATOM 122 O GLU 20 38.684 15.987 2.526 1.00 0.00 O ATOM 123 C GLU 20 37.691 15.543 1.949 1.00 0.00 C ATOM 124 N PHE 21 36.467 15.612 2.462 1.00 0.00 N ATOM 125 CA PHE 21 36.215 16.226 3.761 1.00 0.00 C ATOM 126 CB PHE 21 35.201 17.364 3.628 1.00 0.00 C ATOM 127 CG PHE 21 34.951 18.107 4.908 1.00 0.00 C ATOM 128 CD1 PHE 21 35.557 19.328 5.146 1.00 0.00 C ATOM 129 CD2 PHE 21 34.111 17.585 5.877 1.00 0.00 C ATOM 130 CE1 PHE 21 35.328 20.012 6.325 1.00 0.00 C ATOM 131 CE2 PHE 21 33.881 18.268 7.055 1.00 0.00 C ATOM 132 CZ PHE 21 34.485 19.477 7.282 1.00 0.00 C ATOM 133 O PHE 21 34.539 14.835 4.769 1.00 0.00 O ATOM 134 C PHE 21 35.716 15.192 4.765 1.00 0.00 C ATOM 135 N GLU 22 36.620 14.716 5.616 1.00 0.00 N ATOM 136 CA GLU 22 36.270 13.724 6.626 1.00 0.00 C ATOM 137 CB GLU 22 37.531 13.054 7.178 1.00 0.00 C ATOM 138 CG GLU 22 37.580 11.551 6.961 1.00 0.00 C ATOM 139 CD GLU 22 38.856 11.105 6.273 1.00 0.00 C ATOM 140 OE1 GLU 22 39.292 11.792 5.327 1.00 0.00 O ATOM 141 OE2 GLU 22 39.419 10.068 6.682 1.00 0.00 O ATOM 142 O GLU 22 35.822 15.428 8.260 1.00 0.00 O ATOM 143 C GLU 22 35.470 14.360 7.759 1.00 0.00 C ATOM 144 N HIS 23 34.390 13.696 8.158 1.00 0.00 N ATOM 145 CA HIS 23 33.538 14.194 9.231 1.00 0.00 C ATOM 146 CB HIS 23 32.185 13.480 9.216 1.00 0.00 C ATOM 147 CG HIS 23 32.267 12.023 9.555 1.00 0.00 C ATOM 148 CD2 HIS 23 32.059 11.224 10.753 1.00 0.00 C ATOM 149 ND1 HIS 23 32.606 11.062 8.629 1.00 0.00 N ATOM 150 CE1 HIS 23 32.593 9.857 9.226 1.00 0.00 C ATOM 151 NE2 HIS 23 32.268 9.946 10.500 1.00 0.00 N ATOM 152 O HIS 23 33.826 14.643 11.573 1.00 0.00 O ATOM 153 C HIS 23 34.213 14.015 10.588 1.00 0.00 C ATOM 154 N GLY 24 35.223 13.153 10.632 1.00 0.00 N ATOM 155 CA GLY 24 35.953 12.893 11.868 1.00 0.00 C ATOM 156 O GLY 24 36.152 14.445 13.690 1.00 0.00 O ATOM 157 C GLY 24 36.412 14.196 12.513 1.00 0.00 C ATOM 158 N THR 25 37.098 15.028 11.734 1.00 0.00 N ATOM 159 CA THR 25 37.595 16.305 12.228 1.00 0.00 C ATOM 160 CB THR 25 39.105 16.244 12.528 1.00 0.00 C ATOM 161 CG2 THR 25 39.368 15.432 13.787 1.00 0.00 C ATOM 162 OG1 THR 25 39.788 15.622 11.432 1.00 0.00 O ATOM 163 O THR 25 37.921 18.498 11.309 1.00 0.00 O ATOM 164 C THR 25 37.323 17.425 11.233 1.00 0.00 C ATOM 165 N THR 26 36.413 17.169 10.297 1.00 0.00 N ATOM 166 CA THR 26 36.060 18.158 9.284 1.00 0.00 C ATOM 167 CB THR 26 35.298 19.347 9.900 1.00 0.00 C ATOM 168 CG2 THR 26 34.112 18.854 10.716 1.00 0.00 C ATOM 169 OG1 THR 26 36.172 20.086 10.761 1.00 0.00 O ATOM 170 O THR 26 37.336 19.807 8.093 1.00 0.00 O ATOM 171 C THR 26 37.304 18.671 8.567 1.00 0.00 C ATOM 172 N SER 27 38.327 17.826 8.489 1.00 0.00 N ATOM 173 CA SER 27 39.573 18.192 7.827 1.00 0.00 C ATOM 174 CB SER 27 40.749 17.426 8.435 1.00 0.00 C ATOM 175 OG SER 27 40.651 16.039 8.161 1.00 0.00 O ATOM 176 O SER 27 38.658 17.145 5.870 1.00 0.00 O ATOM 177 C SER 27 39.491 17.927 6.327 1.00 0.00 C ATOM 181 N VAL 32 40.360 18.583 5.566 1.00 0.00 N ATOM 182 CA VAL 32 40.387 18.418 4.118 1.00 0.00 C ATOM 183 CB VAL 32 40.435 19.776 3.395 1.00 0.00 C ATOM 184 CG1 VAL 32 40.520 19.577 1.890 1.00 0.00 C ATOM 185 CG2 VAL 32 39.219 20.616 3.758 1.00 0.00 C ATOM 186 O VAL 32 42.696 17.762 4.142 1.00 0.00 O ATOM 187 C VAL 32 41.570 17.561 3.684 1.00 0.00 C ATOM 188 N TYR 33 41.310 16.608 2.797 1.00 0.00 N ATOM 189 CA TYR 33 42.354 15.719 2.301 1.00 0.00 C ATOM 190 CB TYR 33 42.002 14.261 2.595 1.00 0.00 C ATOM 191 CG TYR 33 41.934 13.932 4.070 1.00 0.00 C ATOM 192 CD1 TYR 33 40.775 14.165 4.798 1.00 0.00 C ATOM 193 CD2 TYR 33 43.031 13.391 4.729 1.00 0.00 C ATOM 194 CE1 TYR 33 40.704 13.868 6.146 1.00 0.00 C ATOM 195 CE2 TYR 33 42.978 13.088 6.076 1.00 0.00 C ATOM 196 CZ TYR 33 41.802 13.331 6.783 1.00 0.00 C ATOM 197 OH TYR 33 41.733 13.036 8.125 1.00 0.00 H ATOM 198 O TYR 33 41.651 15.731 0.005 1.00 0.00 O ATOM 199 C TYR 33 42.570 15.917 0.804 1.00 0.00 C ATOM 200 N VAL 34 43.788 16.292 0.431 1.00 0.00 N ATOM 201 CA VAL 34 44.123 16.515 -0.972 1.00 0.00 C ATOM 202 CB VAL 34 44.120 18.015 -1.321 1.00 0.00 C ATOM 203 CG1 VAL 34 42.730 18.604 -1.132 1.00 0.00 C ATOM 204 CG2 VAL 34 45.139 18.761 -0.473 1.00 0.00 C ATOM 205 O VAL 34 46.457 16.104 -0.590 1.00 0.00 O ATOM 206 C VAL 34 45.480 15.907 -1.309 1.00 0.00 C ATOM 207 N ASP 35 45.531 15.162 -2.409 1.00 0.00 N ATOM 208 CA ASP 35 46.768 14.520 -2.843 1.00 0.00 C ATOM 209 CB ASP 35 47.750 15.561 -3.385 1.00 0.00 C ATOM 210 CG ASP 35 48.890 14.936 -4.164 1.00 0.00 C ATOM 211 OD1 ASP 35 48.696 13.835 -4.720 1.00 0.00 O ATOM 212 OD2 ASP 35 49.977 15.549 -4.220 1.00 0.00 O ATOM 213 O ASP 35 48.602 13.863 -1.441 1.00 0.00 O ATOM 214 C ASP 35 47.406 13.741 -1.698 1.00 0.00 C ATOM 215 N GLY 36 46.597 12.939 -1.012 1.00 0.00 N ATOM 216 CA GLY 36 47.099 12.150 0.098 1.00 0.00 C ATOM 217 O GLY 36 49.006 12.586 1.473 1.00 0.00 O ATOM 218 C GLY 36 47.908 12.978 1.078 1.00 0.00 C ATOM 219 N LYS 37 47.365 14.126 1.471 1.00 0.00 N ATOM 220 CA LYS 37 48.047 15.012 2.409 1.00 0.00 C ATOM 221 CB LYS 37 48.999 15.949 1.664 1.00 0.00 C ATOM 222 CG LYS 37 49.810 16.859 2.571 1.00 0.00 C ATOM 223 CD LYS 37 50.791 17.705 1.773 1.00 0.00 C ATOM 224 CE LYS 37 51.598 18.618 2.681 1.00 0.00 C ATOM 225 NZ LYS 37 52.568 19.446 1.913 1.00 0.00 N ATOM 226 O LYS 37 46.320 16.658 2.680 1.00 0.00 O ATOM 227 C LYS 37 47.041 15.819 3.222 1.00 0.00 C ATOM 228 N GLU 38 46.997 15.561 4.524 1.00 0.00 N ATOM 229 CA GLU 38 46.080 16.263 5.414 1.00 0.00 C ATOM 230 CB GLU 38 46.309 15.835 6.866 1.00 0.00 C ATOM 231 CG GLU 38 45.356 16.481 7.860 1.00 0.00 C ATOM 232 CD GLU 38 43.919 16.044 7.655 1.00 0.00 C ATOM 233 OE1 GLU 38 43.312 16.455 6.644 1.00 0.00 O ATOM 234 OE2 GLU 38 43.399 15.293 8.508 1.00 0.00 O ATOM 235 O GLU 38 47.180 18.359 5.823 1.00 0.00 O ATOM 236 C GLU 38 46.243 17.774 5.278 1.00 0.00 C ATOM 240 N GLY 50 30.324 26.456 9.298 1.00 0.00 N ATOM 241 CA GLY 50 31.771 26.428 9.475 1.00 0.00 C ATOM 242 O GLY 50 32.195 26.338 7.117 1.00 0.00 O ATOM 243 C GLY 50 32.491 26.844 8.200 1.00 0.00 C ATOM 244 N LYS 51 33.437 27.768 8.333 1.00 0.00 N ATOM 245 CA LYS 51 34.199 28.250 7.186 1.00 0.00 C ATOM 246 CB LYS 51 34.232 29.780 7.170 1.00 0.00 C ATOM 247 CG LYS 51 35.021 30.372 6.015 1.00 0.00 C ATOM 248 CD LYS 51 34.295 30.178 4.693 1.00 0.00 C ATOM 249 CE LYS 51 34.980 30.943 3.570 1.00 0.00 C ATOM 250 NZ LYS 51 36.317 30.373 3.247 1.00 0.00 N ATOM 251 O LYS 51 36.504 28.233 7.872 1.00 0.00 O ATOM 252 C LYS 51 35.620 27.693 7.205 1.00 0.00 C ATOM 253 N GLU 52 35.834 26.607 6.467 1.00 0.00 N ATOM 254 CA GLU 52 37.146 25.976 6.398 1.00 0.00 C ATOM 255 CB GLU 52 37.013 24.510 5.979 1.00 0.00 C ATOM 256 CG GLU 52 38.332 23.757 5.931 1.00 0.00 C ATOM 257 CD GLU 52 38.960 23.595 7.301 1.00 0.00 C ATOM 258 OE1 GLU 52 38.329 22.961 8.173 1.00 0.00 O ATOM 259 OE2 GLU 52 40.082 24.103 7.505 1.00 0.00 O ATOM 260 O GLU 52 37.858 26.684 4.217 1.00 0.00 O ATOM 261 C GLU 52 38.063 26.716 5.432 1.00 0.00 C ATOM 262 N THR 53 39.075 27.382 5.977 1.00 0.00 N ATOM 263 CA THR 53 40.026 28.130 5.161 1.00 0.00 C ATOM 264 CB THR 53 40.271 29.541 5.729 1.00 0.00 C ATOM 265 CG2 THR 53 41.272 30.294 4.869 1.00 0.00 C ATOM 266 OG1 THR 53 39.037 30.272 5.744 1.00 0.00 O ATOM 267 O THR 53 42.136 27.354 6.005 1.00 0.00 O ATOM 268 C THR 53 41.354 27.386 5.055 1.00 0.00 C ATOM 269 N PHE 54 41.600 26.790 3.894 1.00 0.00 N ATOM 270 CA PHE 54 42.832 26.045 3.664 1.00 0.00 C ATOM 271 CB PHE 54 42.539 24.549 3.540 1.00 0.00 C ATOM 272 CG PHE 54 41.383 24.231 2.632 1.00 0.00 C ATOM 273 CD1 PHE 54 41.566 24.141 1.262 1.00 0.00 C ATOM 274 CD2 PHE 54 40.117 24.020 3.147 1.00 0.00 C ATOM 275 CE1 PHE 54 40.505 23.849 0.427 1.00 0.00 C ATOM 276 CE2 PHE 54 39.055 23.728 2.311 1.00 0.00 C ATOM 277 CZ PHE 54 39.245 23.642 0.957 1.00 0.00 C ATOM 278 O PHE 54 42.929 26.724 1.362 1.00 0.00 O ATOM 279 C PHE 54 43.545 26.546 2.412 1.00 0.00 C ATOM 280 N TYR 55 44.851 26.773 2.531 1.00 0.00 N ATOM 281 CA TYR 55 45.647 27.258 1.412 1.00 0.00 C ATOM 282 CB TYR 55 46.875 28.017 1.919 1.00 0.00 C ATOM 283 CG TYR 55 46.550 29.338 2.579 1.00 0.00 C ATOM 284 CD1 TYR 55 46.389 29.425 3.956 1.00 0.00 C ATOM 285 CD2 TYR 55 46.403 30.494 1.823 1.00 0.00 C ATOM 286 CE1 TYR 55 46.090 30.627 4.568 1.00 0.00 C ATOM 287 CE2 TYR 55 46.105 31.706 2.417 1.00 0.00 C ATOM 288 CZ TYR 55 45.950 31.764 3.802 1.00 0.00 C ATOM 289 OH TYR 55 45.653 32.963 4.410 1.00 0.00 H ATOM 290 O TYR 55 46.351 25.001 0.980 1.00 0.00 O ATOM 291 C TYR 55 46.077 26.104 0.509 1.00 0.00 C ATOM 292 N VAL 56 46.128 26.369 -0.792 1.00 0.00 N ATOM 293 CA VAL 56 46.524 25.354 -1.762 1.00 0.00 C ATOM 294 CB VAL 56 45.304 24.774 -2.503 1.00 0.00 C ATOM 295 CG1 VAL 56 45.716 23.589 -3.360 1.00 0.00 C ATOM 296 CG2 VAL 56 44.222 24.370 -1.513 1.00 0.00 C ATOM 297 O VAL 56 47.136 26.567 -3.742 1.00 0.00 O ATOM 298 C VAL 56 47.519 25.917 -2.771 1.00 0.00 C ATOM 299 N GLY 57 48.803 25.661 -2.533 1.00 0.00 N ATOM 300 CA GLY 57 49.834 26.149 -3.430 1.00 0.00 C ATOM 301 O GLY 57 49.809 28.445 -2.765 1.00 0.00 O ATOM 302 C GLY 57 49.720 27.637 -3.690 1.00 0.00 C ATOM 306 N LYS 60 49.524 28.003 -4.953 1.00 0.00 N ATOM 307 CA LYS 60 49.401 29.405 -5.333 1.00 0.00 C ATOM 308 CB LYS 60 50.194 29.687 -6.611 1.00 0.00 C ATOM 309 CG LYS 60 51.696 29.508 -6.461 1.00 0.00 C ATOM 310 CD LYS 60 52.423 29.846 -7.753 1.00 0.00 C ATOM 311 CE LYS 60 53.927 29.676 -7.600 1.00 0.00 C ATOM 312 NZ LYS 60 54.653 29.999 -8.860 1.00 0.00 N ATOM 313 O LYS 60 47.616 30.691 -6.302 1.00 0.00 O ATOM 314 C LYS 60 47.936 29.789 -5.525 1.00 0.00 C ATOM 315 N THR 61 47.051 29.100 -4.813 1.00 0.00 N ATOM 316 CA THR 61 45.620 29.369 -4.904 1.00 0.00 C ATOM 317 CB THR 61 44.885 28.260 -5.678 1.00 0.00 C ATOM 318 CG2 THR 61 45.516 28.059 -7.046 1.00 0.00 C ATOM 319 OG1 THR 61 44.970 27.028 -4.950 1.00 0.00 O ATOM 320 O THR 61 45.621 29.152 -2.511 1.00 0.00 O ATOM 321 C THR 61 45.006 29.514 -3.514 1.00 0.00 C ATOM 322 N LYS 62 43.790 30.046 -3.465 1.00 0.00 N ATOM 323 CA LYS 62 43.092 30.239 -2.199 1.00 0.00 C ATOM 324 CB LYS 62 42.926 31.731 -1.900 1.00 0.00 C ATOM 325 CG LYS 62 44.236 32.470 -1.691 1.00 0.00 C ATOM 326 CD LYS 62 43.998 33.940 -1.380 1.00 0.00 C ATOM 327 CE LYS 62 45.309 34.686 -1.194 1.00 0.00 C ATOM 328 NZ LYS 62 45.089 36.122 -0.866 1.00 0.00 N ATOM 329 O LYS 62 40.724 30.156 -2.587 1.00 0.00 O ATOM 330 C LYS 62 41.730 29.551 -2.219 1.00 0.00 C ATOM 331 N ALA 63 41.709 28.285 -1.821 1.00 0.00 N ATOM 332 CA ALA 63 40.470 27.512 -1.795 1.00 0.00 C ATOM 333 CB ALA 63 40.717 26.099 -2.299 1.00 0.00 C ATOM 334 O ALA 63 40.506 27.935 0.569 1.00 0.00 O ATOM 335 C ALA 63 39.881 27.476 -0.388 1.00 0.00 C ATOM 336 N THR 64 38.678 26.928 -0.271 1.00 0.00 N ATOM 337 CA THR 64 38.002 26.837 1.018 1.00 0.00 C ATOM 338 CB THR 64 37.721 28.231 1.607 1.00 0.00 C ATOM 339 CG2 THR 64 36.742 28.994 0.728 1.00 0.00 C ATOM 340 OG1 THR 64 37.148 28.093 2.915 1.00 0.00 O ATOM 341 O THR 64 36.007 26.143 -0.127 1.00 0.00 O ATOM 342 C THR 64 36.694 26.063 0.893 1.00 0.00 C ATOM 343 N ILE 65 36.353 25.316 1.938 1.00 0.00 N ATOM 344 CA ILE 65 35.125 24.530 1.948 1.00 0.00 C ATOM 345 CB ILE 65 35.344 23.148 2.592 1.00 0.00 C ATOM 346 CG1 ILE 65 36.010 22.196 1.596 1.00 0.00 C ATOM 347 CG2 ILE 65 34.031 22.591 3.118 1.00 0.00 C ATOM 348 CD1 ILE 65 36.370 20.850 2.185 1.00 0.00 C ATOM 349 O ILE 65 34.053 25.445 3.892 1.00 0.00 O ATOM 350 C ILE 65 34.006 25.267 2.675 1.00 0.00 C ATOM 351 N ASN 66 32.998 25.693 1.921 1.00 0.00 N ATOM 352 CA ASN 66 31.862 26.409 2.493 1.00 0.00 C ATOM 353 CB ASN 66 31.174 27.262 1.426 1.00 0.00 C ATOM 354 CG ASN 66 30.044 28.100 1.990 1.00 0.00 C ATOM 355 ND2 ASN 66 29.724 29.196 1.310 1.00 0.00 N ATOM 356 OD1 ASN 66 29.465 27.763 3.024 1.00 0.00 O ATOM 357 O ASN 66 30.100 24.781 2.436 1.00 0.00 O ATOM 358 C ASN 66 30.873 25.438 3.130 1.00 0.00 C ATOM 359 N ILE 67 30.903 25.356 4.456 1.00 0.00 N ATOM 360 CA ILE 67 30.006 24.469 5.187 1.00 0.00 C ATOM 361 CB ILE 67 30.716 23.812 6.384 1.00 0.00 C ATOM 362 CG1 ILE 67 31.865 22.925 5.904 1.00 0.00 C ATOM 363 CG2 ILE 67 29.721 23.038 7.236 1.00 0.00 C ATOM 364 CD1 ILE 67 33.144 23.683 5.619 1.00 0.00 C ATOM 365 O ILE 67 28.829 26.400 5.994 1.00 0.00 O ATOM 366 C ILE 67 28.766 25.216 5.665 1.00 0.00 C ATOM 367 N ASP 68 27.636 24.516 5.702 1.00 0.00 N ATOM 368 CA ASP 68 26.380 25.113 6.140 1.00 0.00 C ATOM 369 CB ASP 68 25.591 25.644 4.941 1.00 0.00 C ATOM 370 CG ASP 68 24.328 26.374 5.353 1.00 0.00 C ATOM 371 OD1 ASP 68 23.901 26.214 6.516 1.00 0.00 O ATOM 372 OD2 ASP 68 23.765 27.106 4.512 1.00 0.00 O ATOM 373 O ASP 68 25.172 23.054 6.397 1.00 0.00 O ATOM 374 C ASP 68 25.536 24.109 6.917 1.00 0.00 C ATOM 375 N ALA 69 25.232 24.443 8.168 1.00 0.00 N ATOM 376 CA ALA 69 24.432 23.568 9.019 1.00 0.00 C ATOM 377 CB ALA 69 24.815 23.756 10.479 1.00 0.00 C ATOM 378 O ALA 69 22.518 24.980 8.680 1.00 0.00 O ATOM 379 C ALA 69 22.943 23.835 8.824 1.00 0.00 C ATOM 380 N ILE 70 22.152 22.764 8.821 1.00 0.00 N ATOM 381 CA ILE 70 20.711 22.879 8.640 1.00 0.00 C ATOM 382 CB ILE 70 20.284 22.449 7.225 1.00 0.00 C ATOM 383 CG1 ILE 70 20.947 23.341 6.174 1.00 0.00 C ATOM 384 CG2 ILE 70 18.768 22.458 7.100 1.00 0.00 C ATOM 385 CD1 ILE 70 20.765 22.852 4.754 1.00 0.00 C ATOM 386 O ILE 70 20.450 21.016 10.132 1.00 0.00 O ATOM 387 C ILE 70 19.965 22.052 9.684 1.00 0.00 C ATOM 388 N SER 71 18.780 22.519 10.064 1.00 0.00 N ATOM 389 CA SER 71 17.985 21.813 11.052 1.00 0.00 C ATOM 390 CB SER 71 18.565 20.420 11.309 1.00 0.00 C ATOM 391 OG SER 71 19.834 20.505 11.933 1.00 0.00 O ATOM 392 O SER 71 18.161 23.766 12.422 1.00 0.00 O ATOM 393 C SER 71 17.886 22.567 12.363 1.00 0.00 C ATOM 394 N GLY 72 17.491 21.864 13.419 1.00 0.00 N ATOM 395 CA GLY 72 17.355 22.472 14.737 1.00 0.00 C ATOM 396 O GLY 72 18.697 24.219 15.694 1.00 0.00 O ATOM 397 C GLY 72 18.671 23.097 15.186 1.00 0.00 C ATOM 398 N PHE 73 19.764 22.366 14.995 1.00 0.00 N ATOM 399 CA PHE 73 21.084 22.850 15.380 1.00 0.00 C ATOM 400 CB PHE 73 21.338 22.589 16.866 1.00 0.00 C ATOM 401 CG PHE 73 22.594 23.228 17.388 1.00 0.00 C ATOM 402 CD1 PHE 73 22.646 24.589 17.630 1.00 0.00 C ATOM 403 CD2 PHE 73 23.723 22.467 17.636 1.00 0.00 C ATOM 404 CE1 PHE 73 23.801 25.178 18.110 1.00 0.00 C ATOM 405 CE2 PHE 73 24.878 23.055 18.116 1.00 0.00 C ATOM 406 CZ PHE 73 24.919 24.404 18.354 1.00 0.00 C ATOM 407 O PHE 73 22.914 22.865 13.823 1.00 0.00 O ATOM 408 C PHE 73 22.172 22.191 14.536 1.00 0.00 C ATOM 409 N ALA 74 21.469 18.252 9.958 1.00 0.00 N ATOM 410 CA ALA 74 22.115 17.918 8.701 1.00 0.00 C ATOM 411 CB ALA 74 21.074 17.599 7.638 1.00 0.00 C ATOM 412 O ALA 74 22.577 20.158 8.004 1.00 0.00 O ATOM 413 C ALA 74 23.021 19.026 8.203 1.00 0.00 C ATOM 414 N TYR 75 24.294 18.702 7.999 1.00 0.00 N ATOM 415 CA TYR 75 25.263 19.679 7.521 1.00 0.00 C ATOM 416 CB TYR 75 26.479 19.727 8.450 1.00 0.00 C ATOM 417 CG TYR 75 26.176 20.270 9.829 1.00 0.00 C ATOM 418 CD1 TYR 75 24.918 20.772 10.135 1.00 0.00 C ATOM 419 CD2 TYR 75 27.150 20.278 10.818 1.00 0.00 C ATOM 420 CE1 TYR 75 24.633 21.270 11.391 1.00 0.00 C ATOM 421 CE2 TYR 75 26.881 20.771 12.081 1.00 0.00 C ATOM 422 CZ TYR 75 25.610 21.271 12.362 1.00 0.00 C ATOM 423 OH TYR 75 25.328 21.766 13.614 1.00 0.00 H ATOM 424 O TYR 75 25.821 18.199 5.716 1.00 0.00 O ATOM 425 C TYR 75 25.705 19.365 6.097 1.00 0.00 C ATOM 426 N GLU 76 25.950 20.409 5.314 1.00 0.00 N ATOM 427 CA GLU 76 26.382 20.243 3.932 1.00 0.00 C ATOM 428 CB GLU 76 25.252 20.614 2.969 1.00 0.00 C ATOM 429 CG GLU 76 25.598 20.424 1.501 1.00 0.00 C ATOM 430 CD GLU 76 24.437 20.740 0.582 1.00 0.00 C ATOM 431 OE1 GLU 76 23.334 21.023 1.094 1.00 0.00 O ATOM 432 OE2 GLU 76 24.628 20.707 -0.651 1.00 0.00 O ATOM 433 O GLU 76 27.639 22.288 3.897 1.00 0.00 O ATOM 434 C GLU 76 27.618 21.086 3.636 1.00 0.00 C ATOM 435 N TYR 77 28.647 20.446 3.089 1.00 0.00 N ATOM 436 CA TYR 77 29.887 21.137 2.757 1.00 0.00 C ATOM 437 CB TYR 77 31.095 20.347 3.266 1.00 0.00 C ATOM 438 CG TYR 77 31.194 20.285 4.774 1.00 0.00 C ATOM 439 CD1 TYR 77 30.551 19.282 5.488 1.00 0.00 C ATOM 440 CD2 TYR 77 31.931 21.229 5.477 1.00 0.00 C ATOM 441 CE1 TYR 77 30.638 19.217 6.865 1.00 0.00 C ATOM 442 CE2 TYR 77 32.027 21.181 6.856 1.00 0.00 C ATOM 443 CZ TYR 77 31.373 20.162 7.547 1.00 0.00 C ATOM 444 OH TYR 77 31.458 20.100 8.919 1.00 0.00 H ATOM 445 O TYR 77 29.707 20.463 0.459 1.00 0.00 O ATOM 446 C TYR 77 29.999 21.358 1.251 1.00 0.00 C ATOM 447 N THR 78 30.424 22.556 0.863 1.00 0.00 N ATOM 448 CA THR 78 30.570 22.896 -0.545 1.00 0.00 C ATOM 449 CB THR 78 29.494 23.901 -1.000 1.00 0.00 C ATOM 450 CG2 THR 78 28.650 23.307 -2.116 1.00 0.00 C ATOM 451 OG1 THR 78 28.639 24.219 0.105 1.00 0.00 O ATOM 452 O THR 78 32.246 24.617 -0.478 1.00 0.00 O ATOM 453 C THR 78 31.953 23.473 -0.831 1.00 0.00 C ATOM 454 N LEU 79 32.801 22.676 -1.471 1.00 0.00 N ATOM 455 CA LEU 79 34.154 23.107 -1.805 1.00 0.00 C ATOM 456 CB LEU 79 34.968 21.937 -2.362 1.00 0.00 C ATOM 457 CG LEU 79 36.320 22.287 -2.985 1.00 0.00 C ATOM 458 CD1 LEU 79 37.205 23.012 -1.981 1.00 0.00 C ATOM 459 CD2 LEU 79 37.016 21.036 -3.498 1.00 0.00 C ATOM 460 O LEU 79 33.332 24.251 -3.750 1.00 0.00 O ATOM 461 C LEU 79 34.128 24.254 -2.808 1.00 0.00 C ATOM 462 N GLU 80 35.003 25.234 -2.605 1.00 0.00 N ATOM 463 CA GLU 80 35.081 26.384 -3.495 1.00 0.00 C ATOM 464 CB GLU 80 34.350 27.582 -2.888 1.00 0.00 C ATOM 465 CG GLU 80 32.857 27.369 -2.702 1.00 0.00 C ATOM 466 CD GLU 80 32.164 28.579 -2.104 1.00 0.00 C ATOM 467 OE1 GLU 80 32.870 29.527 -1.703 1.00 0.00 O ATOM 468 OE2 GLU 80 30.918 28.575 -2.033 1.00 0.00 O ATOM 469 O GLU 80 37.347 26.889 -2.880 1.00 0.00 O ATOM 470 C GLU 80 36.531 26.751 -3.791 1.00 0.00 C ATOM 471 N ILE 81 36.846 26.912 -5.073 1.00 0.00 N ATOM 472 CA ILE 81 38.197 27.267 -5.491 1.00 0.00 C ATOM 473 CB ILE 81 38.879 26.107 -6.241 1.00 0.00 C ATOM 474 CG1 ILE 81 38.952 24.865 -5.352 1.00 0.00 C ATOM 475 CG2 ILE 81 40.254 26.530 -6.738 1.00 0.00 C ATOM 476 CD1 ILE 81 39.425 23.623 -6.073 1.00 0.00 C ATOM 477 O ILE 81 37.642 28.515 -7.465 1.00 0.00 O ATOM 478 C ILE 81 38.193 28.515 -6.364 1.00 0.00 C ATOM 479 N ASN 82 38.810 29.582 -5.866 1.00 0.00 N ATOM 480 CA ASN 82 38.877 30.838 -6.601 1.00 0.00 C ATOM 481 CB ASN 82 39.584 30.636 -7.944 1.00 0.00 C ATOM 482 CG ASN 82 40.034 31.942 -8.569 1.00 0.00 C ATOM 483 ND2 ASN 82 40.104 31.968 -9.894 1.00 0.00 N ATOM 484 OD1 ASN 82 40.311 32.915 -7.866 1.00 0.00 O ATOM 485 O ASN 82 37.132 31.843 -7.909 1.00 0.00 O ATOM 486 C ASN 82 37.485 31.426 -6.806 1.00 0.00 C ATOM 487 N GLY 83 36.698 31.453 -5.735 1.00 0.00 N ATOM 488 CA GLY 83 35.342 31.989 -5.797 1.00 0.00 C ATOM 489 O GLY 83 33.756 31.830 -7.594 1.00 0.00 O ATOM 490 C GLY 83 34.506 31.230 -6.823 1.00 0.00 C ATOM 491 N LYS 84 34.638 29.909 -6.825 1.00 0.00 N ATOM 492 CA LYS 84 33.896 29.067 -7.757 1.00 0.00 C ATOM 493 CB LYS 84 34.767 28.697 -8.959 1.00 0.00 C ATOM 494 CG LYS 84 34.048 27.880 -10.018 1.00 0.00 C ATOM 495 CD LYS 84 34.947 27.617 -11.215 1.00 0.00 C ATOM 496 CE LYS 84 34.235 26.780 -12.268 1.00 0.00 C ATOM 497 NZ LYS 84 35.104 26.514 -13.446 1.00 0.00 N ATOM 498 O LYS 84 34.168 27.055 -6.474 1.00 0.00 O ATOM 499 C LYS 84 33.390 27.804 -7.064 1.00 0.00 C ATOM 500 N SER 85 32.082 27.577 -7.140 1.00 0.00 N ATOM 501 CA SER 85 31.474 26.406 -6.520 1.00 0.00 C ATOM 502 CB SER 85 29.952 26.458 -6.653 1.00 0.00 C ATOM 503 OG SER 85 29.414 27.567 -5.957 1.00 0.00 O ATOM 504 O SER 85 32.318 25.071 -8.331 1.00 0.00 O ATOM 505 C SER 85 32.014 25.119 -7.138 1.00 0.00 C ATOM 506 N LEU 86 32.132 24.080 -6.321 1.00 0.00 N ATOM 507 CA LEU 86 32.636 22.794 -6.787 1.00 0.00 C ATOM 508 CB LEU 86 33.944 22.440 -6.075 1.00 0.00 C ATOM 509 CG LEU 86 35.184 23.220 -6.512 1.00 0.00 C ATOM 510 CD1 LEU 86 35.159 24.632 -5.946 1.00 0.00 C ATOM 511 CD2 LEU 86 36.452 22.501 -6.079 1.00 0.00 C ATOM 512 O LEU 86 31.039 21.538 -5.487 1.00 0.00 O ATOM 513 C LEU 86 31.606 21.689 -6.570 1.00 0.00 C ATOM 514 N LYS 87 31.358 20.895 -7.621 1.00 0.00 N ATOM 515 CA LYS 87 30.399 19.788 -7.570 1.00 0.00 C ATOM 516 CB LYS 87 30.109 19.266 -8.978 1.00 0.00 C ATOM 517 CG LYS 87 29.388 20.262 -9.874 1.00 0.00 C ATOM 518 CD LYS 87 29.111 19.671 -11.247 1.00 0.00 C ATOM 519 CE LYS 87 28.381 20.661 -12.137 1.00 0.00 C ATOM 520 NZ LYS 87 28.112 20.099 -13.490 1.00 0.00 N ATOM 521 O LYS 87 32.039 18.224 -6.785 1.00 0.00 O ATOM 522 C LYS 87 30.885 18.640 -6.694 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 512 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 51.66 62.9 124 69.7 178 ARMSMC SECONDARY STRUCTURE . . 39.04 70.1 97 82.2 118 ARMSMC SURFACE . . . . . . . . 56.26 55.7 70 64.8 108 ARMSMC BURIED . . . . . . . . 45.01 72.2 54 77.1 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.43 40.7 54 72.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 82.23 42.6 47 71.2 66 ARMSSC1 SECONDARY STRUCTURE . . 83.35 43.2 44 84.6 52 ARMSSC1 SURFACE . . . . . . . . 94.40 31.0 29 65.9 44 ARMSSC1 BURIED . . . . . . . . 73.66 52.0 25 80.6 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.27 51.4 37 67.3 55 ARMSSC2 RELIABLE SIDE CHAINS . 57.06 56.7 30 65.2 46 ARMSSC2 SECONDARY STRUCTURE . . 55.56 56.2 32 82.1 39 ARMSSC2 SURFACE . . . . . . . . 58.52 50.0 20 60.6 33 ARMSSC2 BURIED . . . . . . . . 55.76 52.9 17 77.3 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 41.71 69.2 13 54.2 24 ARMSSC3 RELIABLE SIDE CHAINS . 41.71 69.2 13 54.2 24 ARMSSC3 SECONDARY STRUCTURE . . 43.41 66.7 12 70.6 17 ARMSSC3 SURFACE . . . . . . . . 34.42 90.0 10 55.6 18 ARMSSC3 BURIED . . . . . . . . 59.92 0.0 3 50.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 99.71 28.6 7 53.8 13 ARMSSC4 RELIABLE SIDE CHAINS . 99.71 28.6 7 53.8 13 ARMSSC4 SECONDARY STRUCTURE . . 107.69 16.7 6 60.0 10 ARMSSC4 SURFACE . . . . . . . . 99.71 28.6 7 63.6 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.04 (Number of atoms: 66) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.04 66 73.3 90 CRMSCA CRN = ALL/NP . . . . . 0.0461 CRMSCA SECONDARY STRUCTURE . . 1.71 51 86.4 59 CRMSCA SURFACE . . . . . . . . 3.78 38 69.1 55 CRMSCA BURIED . . . . . . . . 1.58 28 80.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.20 323 73.1 442 CRMSMC SECONDARY STRUCTURE . . 1.82 253 86.3 293 CRMSMC SURFACE . . . . . . . . 3.97 184 68.4 269 CRMSMC BURIED . . . . . . . . 1.72 139 80.3 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.03 248 69.7 356 CRMSSC RELIABLE SIDE CHAINS . 3.89 216 68.4 316 CRMSSC SECONDARY STRUCTURE . . 3.31 212 84.1 252 CRMSSC SURFACE . . . . . . . . 4.98 123 60.3 204 CRMSSC BURIED . . . . . . . . 2.80 125 82.2 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.60 512 71.5 716 CRMSALL SECONDARY STRUCTURE . . 2.66 416 85.2 488 CRMSALL SURFACE . . . . . . . . 4.40 275 64.9 424 CRMSALL BURIED . . . . . . . . 2.34 237 81.2 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.136 1.000 0.500 66 73.3 90 ERRCA SECONDARY STRUCTURE . . 1.438 1.000 0.500 51 86.4 59 ERRCA SURFACE . . . . . . . . 2.699 1.000 0.500 38 69.1 55 ERRCA BURIED . . . . . . . . 1.372 1.000 0.500 28 80.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.231 1.000 0.500 323 73.1 442 ERRMC SECONDARY STRUCTURE . . 1.509 1.000 0.500 253 86.3 293 ERRMC SURFACE . . . . . . . . 2.818 1.000 0.500 184 68.4 269 ERRMC BURIED . . . . . . . . 1.453 1.000 0.500 139 80.3 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.099 1.000 0.500 248 69.7 356 ERRSC RELIABLE SIDE CHAINS . 2.941 1.000 0.500 216 68.4 316 ERRSC SECONDARY STRUCTURE . . 2.588 1.000 0.500 212 84.1 252 ERRSC SURFACE . . . . . . . . 4.057 1.000 0.500 123 60.3 204 ERRSC BURIED . . . . . . . . 2.156 1.000 0.500 125 82.2 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.629 1.000 0.500 512 71.5 716 ERRALL SECONDARY STRUCTURE . . 2.035 1.000 0.500 416 85.2 488 ERRALL SURFACE . . . . . . . . 3.333 1.000 0.500 275 64.9 424 ERRALL BURIED . . . . . . . . 1.812 1.000 0.500 237 81.2 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 22 46 56 58 64 66 90 DISTCA CA (P) 24.44 51.11 62.22 64.44 71.11 90 DISTCA CA (RMS) 0.78 1.22 1.52 1.60 2.39 DISTCA ALL (N) 120 293 370 449 493 512 716 DISTALL ALL (P) 16.76 40.92 51.68 62.71 68.85 716 DISTALL ALL (RMS) 0.78 1.26 1.59 2.15 2.91 DISTALL END of the results output