####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS278_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS278_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 16 - 36 4.93 13.54 LONGEST_CONTINUOUS_SEGMENT: 21 17 - 37 4.65 13.76 LONGEST_CONTINUOUS_SEGMENT: 21 49 - 69 4.95 16.15 LCS_AVERAGE: 18.47 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 57 - 68 1.93 15.59 LONGEST_CONTINUOUS_SEGMENT: 12 58 - 69 1.99 15.29 LCS_AVERAGE: 9.59 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 28 - 35 0.94 17.34 LONGEST_CONTINUOUS_SEGMENT: 8 59 - 66 0.91 15.34 LONGEST_CONTINUOUS_SEGMENT: 8 60 - 67 0.99 15.16 LCS_AVERAGE: 6.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 11 0 3 3 3 3 5 5 7 9 12 13 14 17 18 20 23 27 28 28 36 LCS_GDT T 2 T 2 5 7 11 3 5 5 8 12 12 12 15 15 15 16 16 18 20 22 23 24 31 36 40 LCS_GDT D 3 D 3 5 7 11 3 5 10 11 12 14 14 15 15 15 16 17 24 28 32 34 36 38 40 45 LCS_GDT L 4 L 4 5 7 11 3 5 10 11 12 14 14 15 15 15 16 17 18 21 26 28 32 35 39 41 LCS_GDT V 5 V 5 5 7 12 3 8 10 11 12 14 14 15 15 15 16 17 19 21 25 25 29 33 36 40 LCS_GDT A 6 A 6 5 7 12 3 8 10 11 12 14 14 15 15 15 16 17 19 21 22 24 28 30 33 38 LCS_GDT V 7 V 7 3 7 12 3 3 4 6 6 14 14 15 15 15 16 17 19 21 25 25 28 31 37 40 LCS_GDT W 8 W 8 5 7 12 4 4 5 5 5 7 7 10 13 14 17 21 23 25 26 30 33 34 37 39 LCS_GDT D 9 D 9 5 6 12 4 4 5 5 7 8 9 10 13 15 17 21 23 25 26 30 33 34 37 39 LCS_GDT V 10 V 10 5 6 12 4 4 5 5 6 8 9 10 13 15 16 21 23 25 26 30 33 34 37 39 LCS_GDT A 11 A 11 5 6 12 4 4 5 5 6 6 7 10 10 11 14 16 20 20 22 24 27 30 35 38 LCS_GDT L 12 L 12 5 6 12 1 3 5 5 6 6 7 10 10 11 14 16 17 18 21 24 26 28 31 33 LCS_GDT S 13 S 13 4 6 12 3 3 4 4 6 7 7 8 9 11 14 14 16 18 21 24 27 28 31 35 LCS_GDT D 14 D 14 4 6 12 3 3 4 5 6 7 8 8 10 12 14 16 17 19 21 24 27 28 33 35 LCS_GDT G 15 G 15 4 6 12 3 4 5 5 7 7 8 10 16 16 17 20 25 29 33 35 38 39 41 45 LCS_GDT V 16 V 16 4 6 21 3 4 4 5 6 10 11 13 17 21 24 27 29 31 33 36 38 41 45 50 LCS_GDT H 17 H 17 4 6 21 3 4 4 8 10 11 12 14 16 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT K 18 K 18 4 9 21 3 4 4 5 7 8 10 15 17 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT I 19 I 19 7 9 21 3 5 7 8 8 8 9 10 13 16 21 25 28 32 37 40 42 44 48 49 LCS_GDT E 20 E 20 7 9 21 6 6 7 8 8 8 9 10 17 18 19 25 28 32 37 40 42 44 48 49 LCS_GDT F 21 F 21 7 9 21 6 6 7 8 8 8 13 15 17 20 22 25 29 34 37 40 42 44 48 50 LCS_GDT E 22 E 22 7 9 21 6 6 7 8 10 12 13 15 17 18 22 25 29 34 37 40 42 44 48 49 LCS_GDT H 23 H 23 7 9 21 6 6 7 8 10 12 13 15 17 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT G 24 G 24 7 9 21 6 6 7 8 8 9 11 15 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT T 25 T 25 7 9 21 6 6 7 8 8 8 10 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT T 26 T 26 7 9 21 3 3 5 8 8 9 13 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT S 27 S 27 6 10 21 3 5 8 9 9 14 14 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT G 28 G 28 8 10 21 3 5 8 9 12 14 14 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT K 29 K 29 8 10 21 4 7 10 11 12 14 14 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT R 30 R 30 8 10 21 4 8 10 11 12 14 14 16 18 21 22 26 29 34 37 40 42 44 48 50 LCS_GDT V 31 V 31 8 10 21 4 8 10 11 12 14 14 16 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT V 32 V 32 8 10 21 4 8 10 11 12 14 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT Y 33 Y 33 8 10 21 4 8 10 11 12 14 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT V 34 V 34 8 10 21 4 8 10 11 12 14 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT D 35 D 35 8 10 21 5 8 10 11 12 14 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT G 36 G 36 5 10 21 5 5 6 6 6 9 10 14 18 21 22 25 29 34 37 40 42 44 48 50 LCS_GDT K 37 K 37 5 5 21 5 5 6 6 6 6 9 11 11 15 17 23 26 29 36 40 42 44 46 47 LCS_GDT E 38 E 38 5 8 14 5 5 7 7 8 9 10 11 11 12 14 16 18 20 24 27 33 37 41 44 LCS_GDT E 39 E 39 5 8 14 5 5 7 7 8 9 10 11 11 12 12 14 18 20 24 26 33 37 41 44 LCS_GDT I 40 I 40 4 8 14 3 4 5 6 8 9 9 11 11 12 14 16 18 20 24 26 32 34 41 44 LCS_GDT R 41 R 41 4 8 14 3 4 5 6 8 9 9 11 11 12 13 16 18 20 24 26 32 34 41 44 LCS_GDT K 42 K 42 4 8 14 3 4 5 6 8 9 9 11 11 12 13 16 18 20 22 26 32 33 38 44 LCS_GDT E 43 E 43 5 8 14 0 4 5 6 8 9 9 11 11 12 13 17 19 21 22 25 32 33 38 43 LCS_GDT W 44 W 44 5 8 14 0 4 5 6 8 9 9 11 11 12 13 16 18 20 22 26 32 34 38 44 LCS_GDT M 45 M 45 5 8 14 3 4 5 6 8 9 9 11 11 12 15 17 19 21 22 25 32 34 38 44 LCS_GDT F 46 F 46 5 7 14 3 4 5 5 7 9 9 11 11 12 13 16 19 21 22 26 32 37 41 44 LCS_GDT K 47 K 47 5 6 17 3 4 5 5 5 7 9 11 11 12 15 18 22 24 31 37 40 42 43 45 LCS_GDT L 48 L 48 3 10 18 3 3 4 5 6 9 11 12 13 17 21 24 29 34 37 40 42 44 48 48 LCS_GDT V 49 V 49 4 10 21 3 4 7 9 10 11 12 14 16 18 23 25 29 34 37 40 42 44 48 50 LCS_GDT G 50 G 50 5 10 21 3 4 7 9 10 12 14 15 16 20 23 27 29 34 37 40 42 44 48 50 LCS_GDT K 51 K 51 5 10 21 3 4 7 9 10 12 14 15 16 20 23 27 29 34 37 40 42 44 48 50 LCS_GDT E 52 E 52 5 10 21 3 4 7 9 10 12 14 15 16 20 24 27 29 34 37 40 42 44 48 50 LCS_GDT T 53 T 53 5 10 21 3 4 7 9 10 12 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT F 54 F 54 5 10 21 3 4 7 9 10 12 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT Y 55 Y 55 5 10 21 3 4 7 9 10 11 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT V 56 V 56 4 10 21 3 4 7 9 10 11 14 16 18 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT G 57 G 57 4 12 21 3 3 6 9 10 12 14 16 18 21 24 27 29 32 35 40 42 44 48 50 LCS_GDT A 58 A 58 3 12 21 3 4 6 8 9 12 14 15 17 21 24 27 29 34 37 40 42 44 48 50 LCS_GDT A 59 A 59 8 12 21 4 6 8 9 10 12 13 15 17 18 22 23 28 31 35 40 42 44 48 50 LCS_GDT K 60 K 60 8 12 21 3 6 8 9 10 12 13 15 17 18 22 23 24 31 33 40 40 43 48 50 LCS_GDT T 61 T 61 8 12 21 3 6 8 9 10 12 13 15 17 18 22 23 26 31 33 36 39 43 48 50 LCS_GDT K 62 K 62 8 12 21 4 6 8 9 10 12 13 15 17 18 22 23 24 27 31 36 38 43 44 50 LCS_GDT A 63 A 63 8 12 21 4 6 8 9 10 12 13 15 17 18 22 25 27 31 33 36 38 43 48 50 LCS_GDT T 64 T 64 8 12 21 4 6 8 9 10 12 13 15 17 18 22 25 27 31 33 36 38 43 48 50 LCS_GDT I 65 I 65 8 12 21 4 6 8 9 10 12 13 15 17 21 24 26 29 31 33 36 38 43 48 50 LCS_GDT N 66 N 66 8 12 21 4 6 8 9 10 12 13 15 17 18 22 25 27 31 33 36 38 43 44 50 LCS_GDT I 67 I 67 8 12 21 4 5 8 9 10 12 13 15 17 21 24 27 29 31 33 36 38 43 48 50 LCS_GDT D 68 D 68 6 12 21 4 5 7 9 10 12 13 15 17 21 24 26 29 31 33 36 38 43 44 50 LCS_GDT A 69 A 69 6 12 21 3 5 6 7 10 12 13 15 17 21 24 27 29 31 33 36 38 44 48 50 LCS_GDT I 70 I 70 4 10 20 3 3 4 7 9 11 13 15 17 20 24 27 29 31 33 36 38 43 44 50 LCS_GDT S 71 S 71 4 7 17 3 3 4 5 7 8 10 11 13 17 18 23 25 29 33 38 42 44 48 50 LCS_GDT G 72 G 72 4 8 17 3 3 5 5 7 8 10 10 11 11 15 18 21 23 34 40 42 44 48 50 LCS_GDT F 73 F 73 6 8 17 6 6 7 7 8 9 10 10 11 11 15 16 20 28 34 40 42 44 48 50 LCS_GDT A 74 A 74 6 8 15 6 6 7 7 8 9 10 10 11 14 15 17 21 34 37 40 42 44 48 50 LCS_GDT Y 75 Y 75 6 8 14 6 6 7 7 8 9 10 10 13 14 15 16 19 30 37 40 42 44 48 50 LCS_GDT E 76 E 76 6 8 11 6 6 7 7 8 9 10 10 13 14 15 19 24 34 37 40 42 44 48 50 LCS_GDT Y 77 Y 77 6 8 11 6 6 7 7 8 9 10 10 13 14 15 19 24 34 37 40 42 44 48 50 LCS_GDT T 78 T 78 6 8 11 6 6 6 7 8 9 10 10 13 14 15 21 26 34 37 40 42 44 48 50 LCS_GDT L 79 L 79 4 8 11 3 4 5 7 7 9 10 10 13 14 21 23 29 34 37 40 42 44 48 50 LCS_GDT E 80 E 80 4 5 11 3 4 5 5 5 6 8 8 10 14 19 24 29 34 37 40 42 44 48 50 LCS_GDT I 81 I 81 4 5 11 3 4 5 5 5 6 9 10 14 18 23 27 29 31 33 36 42 44 46 49 LCS_GDT N 82 N 82 4 8 10 3 4 5 6 9 12 14 15 17 21 24 27 29 31 33 36 38 40 42 45 LCS_GDT G 83 G 83 5 8 10 3 4 5 8 9 12 14 15 16 20 23 27 29 31 33 36 38 40 42 45 LCS_GDT K 84 K 84 6 8 10 3 5 6 8 9 12 14 15 17 21 24 27 29 31 33 36 38 39 42 45 LCS_GDT S 85 S 85 6 8 10 3 5 6 8 9 12 14 15 17 21 24 27 29 31 33 36 38 40 42 45 LCS_GDT L 86 L 86 6 8 10 3 5 6 7 8 11 14 15 17 21 24 27 29 31 33 36 38 40 42 45 LCS_GDT K 87 K 87 6 8 10 3 5 6 7 9 12 14 15 17 21 24 27 29 31 33 36 38 40 42 45 LCS_GDT K 88 K 88 6 8 10 3 5 6 7 8 9 12 13 16 20 23 27 29 31 33 36 38 40 42 45 LCS_GDT Y 89 Y 89 6 8 10 3 5 6 7 8 9 12 13 16 19 24 27 29 31 33 36 38 40 42 45 LCS_GDT M 90 M 90 3 7 10 0 3 3 4 6 9 12 13 17 21 24 27 29 31 33 36 38 40 42 45 LCS_AVERAGE LCS_A: 11.42 ( 6.21 9.59 18.47 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 10 11 12 14 14 16 18 21 24 27 29 34 37 40 42 44 48 50 GDT PERCENT_AT 6.67 8.89 11.11 12.22 13.33 15.56 15.56 17.78 20.00 23.33 26.67 30.00 32.22 37.78 41.11 44.44 46.67 48.89 53.33 55.56 GDT RMS_LOCAL 0.32 0.50 0.85 1.03 1.39 1.90 1.90 2.72 3.12 3.56 4.15 4.68 4.64 5.47 5.73 5.97 6.21 6.45 6.89 7.38 GDT RMS_ALL_AT 17.76 19.87 19.90 20.02 20.09 19.66 19.66 13.27 13.43 13.45 13.57 12.90 13.29 13.63 13.69 13.63 13.48 13.46 13.31 13.14 # Checking swapping # possible swapping detected: D 9 D 9 # possible swapping detected: D 14 D 14 # possible swapping detected: E 20 E 20 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: D 68 D 68 # possible swapping detected: F 73 F 73 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 22.080 0 0.351 1.075 25.408 0.000 0.000 LGA T 2 T 2 19.326 0 0.606 1.428 21.954 0.000 0.000 LGA D 3 D 3 16.737 0 0.369 0.665 16.854 0.000 0.000 LGA L 4 L 4 16.974 0 0.093 1.167 20.685 0.000 0.000 LGA V 5 V 5 18.837 0 0.671 0.574 19.845 0.000 0.000 LGA A 6 A 6 18.411 0 0.088 0.096 18.903 0.000 0.000 LGA V 7 V 7 17.262 0 0.735 1.376 19.811 0.000 0.000 LGA W 8 W 8 21.001 0 0.609 1.196 24.858 0.000 0.000 LGA D 9 D 9 22.699 0 0.347 0.336 26.482 0.000 0.000 LGA V 10 V 10 21.456 0 0.210 0.233 23.298 0.000 0.000 LGA A 11 A 11 24.901 0 0.160 0.261 27.399 0.000 0.000 LGA L 12 L 12 24.978 0 0.364 1.336 25.720 0.000 0.000 LGA S 13 S 13 24.624 0 0.543 0.588 25.702 0.000 0.000 LGA D 14 D 14 20.847 0 0.550 1.244 21.584 0.000 0.000 LGA G 15 G 15 16.173 0 0.392 0.392 18.107 0.000 0.000 LGA V 16 V 16 9.766 0 0.284 0.288 12.604 5.238 3.265 LGA H 17 H 17 6.444 0 0.188 0.335 12.714 22.619 9.333 LGA K 18 K 18 7.087 0 0.358 1.076 11.380 6.548 4.021 LGA I 19 I 19 9.664 0 0.055 0.310 11.851 6.905 3.452 LGA E 20 E 20 10.448 0 0.241 1.035 17.926 0.000 0.000 LGA F 21 F 21 8.160 0 0.114 1.275 12.878 5.357 4.199 LGA E 22 E 22 9.489 0 0.184 1.092 17.606 1.429 0.635 LGA H 23 H 23 6.391 0 0.108 1.214 8.135 20.833 17.333 LGA G 24 G 24 5.932 0 0.052 0.052 6.538 20.833 20.833 LGA T 25 T 25 3.928 0 0.661 1.371 6.733 43.333 34.218 LGA T 26 T 26 3.205 0 0.591 0.623 4.796 45.357 46.395 LGA S 27 S 27 3.729 0 0.534 0.469 6.131 61.548 47.460 LGA G 28 G 28 2.322 0 0.279 0.279 4.155 59.881 59.881 LGA K 29 K 29 1.039 0 0.029 1.328 5.767 75.119 60.423 LGA R 30 R 30 3.324 0 0.060 0.528 11.836 55.476 24.329 LGA V 31 V 31 1.283 0 0.094 0.310 5.018 79.286 62.381 LGA V 32 V 32 3.339 0 0.150 1.120 8.036 52.262 34.422 LGA Y 33 Y 33 1.859 0 0.103 1.313 12.652 81.667 34.921 LGA V 34 V 34 2.958 0 0.059 1.099 7.925 50.714 34.490 LGA D 35 D 35 2.010 0 0.349 0.830 3.081 63.810 64.345 LGA G 36 G 36 6.175 0 0.279 0.279 10.914 14.286 14.286 LGA K 37 K 37 11.778 0 0.131 0.891 19.565 0.357 0.159 LGA E 38 E 38 17.380 0 0.600 1.147 24.345 0.000 0.000 LGA E 39 E 39 17.090 0 0.115 1.132 19.401 0.000 0.000 LGA I 40 I 40 18.938 0 0.120 1.088 22.451 0.000 0.000 LGA R 41 R 41 18.728 0 0.140 1.250 25.518 0.000 0.000 LGA K 42 K 42 19.147 0 0.094 0.495 21.757 0.000 0.000 LGA E 43 E 43 19.793 0 0.615 1.451 25.888 0.000 0.000 LGA W 44 W 44 18.849 0 0.200 1.474 21.466 0.000 0.000 LGA M 45 M 45 19.588 0 0.268 1.038 19.961 0.000 0.000 LGA F 46 F 46 17.997 0 0.556 0.443 20.056 0.000 0.000 LGA K 47 K 47 15.444 0 0.326 0.901 19.160 0.000 0.000 LGA L 48 L 48 10.543 0 0.288 0.929 13.381 0.119 0.119 LGA V 49 V 49 8.358 0 0.582 0.632 10.140 2.619 5.850 LGA G 50 G 50 7.896 0 0.289 0.289 7.896 10.357 10.357 LGA K 51 K 51 7.077 0 0.387 0.866 9.221 7.500 7.884 LGA E 52 E 52 6.379 0 0.442 1.040 7.497 25.714 20.212 LGA T 53 T 53 3.418 0 0.101 1.047 5.180 42.143 39.320 LGA F 54 F 54 1.655 0 0.134 1.363 7.426 79.405 52.684 LGA Y 55 Y 55 1.363 0 0.070 0.252 5.163 79.286 58.730 LGA V 56 V 56 1.504 0 0.077 1.180 5.272 71.071 56.259 LGA G 57 G 57 3.645 0 0.266 0.266 5.837 41.667 41.667 LGA A 58 A 58 5.950 0 0.610 0.563 8.724 15.119 17.333 LGA A 59 A 59 11.946 0 0.449 0.429 14.029 0.357 0.286 LGA K 60 K 60 13.916 0 0.187 0.817 16.401 0.000 0.000 LGA T 61 T 61 12.668 0 0.057 0.094 12.668 0.000 0.000 LGA K 62 K 62 14.459 0 0.032 0.716 25.137 0.000 0.000 LGA A 63 A 63 10.804 0 0.157 0.156 11.666 0.119 1.048 LGA T 64 T 64 12.217 0 0.108 0.996 15.714 0.000 0.000 LGA I 65 I 65 9.275 0 0.071 1.443 9.973 0.952 7.202 LGA N 66 N 66 12.264 0 0.149 1.076 16.700 0.000 0.000 LGA I 67 I 67 8.219 0 0.159 0.201 9.727 1.786 17.560 LGA D 68 D 68 11.526 0 0.541 1.386 16.796 0.000 0.000 LGA A 69 A 69 9.660 0 0.212 0.232 10.016 0.357 0.571 LGA I 70 I 70 10.594 0 0.246 1.238 15.051 0.833 0.417 LGA S 71 S 71 9.418 0 0.312 0.606 12.280 2.024 1.349 LGA G 72 G 72 10.853 0 0.398 0.398 11.599 0.000 0.000 LGA F 73 F 73 12.523 0 0.505 0.910 17.857 0.000 0.000 LGA A 74 A 74 12.107 0 0.087 0.086 12.541 0.000 0.000 LGA Y 75 Y 75 11.891 0 0.039 1.448 15.765 0.000 0.000 LGA E 76 E 76 11.850 0 0.186 0.759 13.689 0.000 0.000 LGA Y 77 Y 77 11.572 0 0.119 0.261 12.755 0.000 0.000 LGA T 78 T 78 12.026 0 0.659 0.604 14.411 0.000 0.000 LGA L 79 L 79 10.206 0 0.435 1.382 10.481 1.429 2.857 LGA E 80 E 80 8.053 0 0.700 1.407 12.775 4.048 1.799 LGA I 81 I 81 8.215 0 0.104 0.464 10.580 8.214 7.262 LGA N 82 N 82 11.710 0 0.561 0.832 13.434 0.000 0.000 LGA G 83 G 83 13.881 0 0.717 0.717 13.881 0.000 0.000 LGA K 84 K 84 13.966 0 0.133 1.073 18.233 0.000 0.000 LGA S 85 S 85 13.632 0 0.223 0.659 15.221 0.000 0.000 LGA L 86 L 86 14.412 0 0.150 1.402 14.921 0.000 0.000 LGA K 87 K 87 14.549 0 0.054 1.065 16.195 0.000 0.000 LGA K 88 K 88 15.602 0 0.133 0.867 15.868 0.000 0.000 LGA Y 89 Y 89 16.516 0 0.401 1.278 23.071 0.000 0.000 LGA M 90 M 90 15.944 0 0.656 0.709 17.940 0.000 0.179 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 11.695 11.627 12.708 12.978 10.352 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 16 2.72 20.833 17.476 0.568 LGA_LOCAL RMSD: 2.716 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.273 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 11.695 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.580805 * X + 0.634015 * Y + -0.510578 * Z + 41.455280 Y_new = -0.186445 * X + -0.714147 * Y + -0.674710 * Z + 25.279942 Z_new = -0.792404 * X + -0.296681 * Y + 0.532989 * Z + 43.819687 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.830973 0.914739 -0.507923 [DEG: -162.2028 52.4107 -29.1019 ] ZXZ: -0.647799 1.008667 -1.929046 [DEG: -37.1161 57.7924 -110.5262 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS278_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS278_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 16 2.72 17.476 11.69 REMARK ---------------------------------------------------------- MOLECULE T0540TS278_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 1id2_A ATOM 1 N MET 1 34.309 28.157 15.997 1.00 0.00 N ATOM 2 CA MET 1 35.716 27.840 15.605 1.00 0.00 C ATOM 3 C MET 1 35.850 26.695 14.540 1.00 0.00 C ATOM 4 O MET 1 35.016 25.787 14.469 1.00 0.00 O ATOM 5 CB MET 1 36.492 27.534 16.921 1.00 0.00 C ATOM 6 CG MET 1 38.034 27.476 16.775 1.00 0.00 C ATOM 7 SD MET 1 38.785 27.011 18.347 1.00 0.00 S ATOM 8 CE MET 1 39.692 28.502 18.776 1.00 0.00 C ATOM 9 N THR 2 36.902 26.769 13.705 1.00 0.00 N ATOM 10 CA THR 2 37.287 25.683 12.753 1.00 0.00 C ATOM 11 C THR 2 38.845 25.773 12.545 1.00 0.00 C ATOM 12 O THR 2 39.337 26.658 11.839 1.00 0.00 O ATOM 13 CB THR 2 36.390 25.633 11.468 1.00 0.00 C ATOM 14 OG1 THR 2 36.513 24.367 10.831 1.00 0.00 O ATOM 15 CG2 THR 2 36.615 26.694 10.381 1.00 0.00 C ATOM 16 N ASP 3 39.643 24.891 13.182 1.00 0.00 N ATOM 17 CA ASP 3 41.141 24.970 13.168 1.00 0.00 C ATOM 18 C ASP 3 41.803 24.529 11.807 1.00 0.00 C ATOM 19 O ASP 3 41.872 23.334 11.504 1.00 0.00 O ATOM 20 CB ASP 3 41.801 24.191 14.351 1.00 0.00 C ATOM 21 CG ASP 3 41.140 24.039 15.720 1.00 0.00 C ATOM 22 OD1 ASP 3 40.216 24.788 16.091 1.00 0.00 O ATOM 23 OD2 ASP 3 41.561 23.133 16.460 1.00 0.00 O ATOM 24 N LEU 4 42.295 25.482 10.996 1.00 0.00 N ATOM 25 CA LEU 4 42.938 25.185 9.678 1.00 0.00 C ATOM 26 C LEU 4 44.506 25.101 9.742 1.00 0.00 C ATOM 27 O LEU 4 45.183 26.116 9.930 1.00 0.00 O ATOM 28 CB LEU 4 42.338 26.126 8.584 1.00 0.00 C ATOM 29 CG LEU 4 42.327 27.679 8.682 1.00 0.00 C ATOM 30 CD1 LEU 4 43.650 28.363 8.304 1.00 0.00 C ATOM 31 CD2 LEU 4 41.238 28.236 7.750 1.00 0.00 C ATOM 32 N VAL 5 45.101 23.899 9.610 1.00 0.00 N ATOM 33 CA VAL 5 46.594 23.699 9.620 1.00 0.00 C ATOM 34 C VAL 5 47.052 22.754 8.449 1.00 0.00 C ATOM 35 O VAL 5 46.326 21.853 8.018 1.00 0.00 O ATOM 36 CB VAL 5 47.197 23.312 11.021 1.00 0.00 C ATOM 37 CG1 VAL 5 47.055 24.428 12.078 1.00 0.00 C ATOM 38 CG2 VAL 5 46.692 21.990 11.631 1.00 0.00 C ATOM 39 N ALA 6 48.261 22.961 7.894 1.00 0.00 N ATOM 40 CA ALA 6 48.732 22.199 6.705 1.00 0.00 C ATOM 41 C ALA 6 49.540 20.888 6.989 1.00 0.00 C ATOM 42 O ALA 6 50.484 20.877 7.786 1.00 0.00 O ATOM 43 CB ALA 6 49.555 23.189 5.854 1.00 0.00 C ATOM 44 N VAL 7 49.169 19.802 6.290 1.00 0.00 N ATOM 45 CA VAL 7 49.907 18.492 6.236 1.00 0.00 C ATOM 46 C VAL 7 50.274 17.616 7.497 1.00 0.00 C ATOM 47 O VAL 7 50.327 16.388 7.347 1.00 0.00 O ATOM 48 CB VAL 7 51.020 18.574 5.119 1.00 0.00 C ATOM 49 CG1 VAL 7 52.258 19.415 5.487 1.00 0.00 C ATOM 50 CG2 VAL 7 51.517 17.207 4.598 1.00 0.00 C ATOM 51 N TRP 8 50.511 18.148 8.710 1.00 0.00 N ATOM 52 CA TRP 8 50.994 17.324 9.870 1.00 0.00 C ATOM 53 C TRP 8 49.927 16.758 10.863 1.00 0.00 C ATOM 54 O TRP 8 49.944 15.546 11.107 1.00 0.00 O ATOM 55 CB TRP 8 52.258 17.968 10.521 1.00 0.00 C ATOM 56 CG TRP 8 53.482 18.092 9.579 1.00 0.00 C ATOM 57 CD1 TRP 8 54.033 19.318 9.144 1.00 0.00 C ATOM 58 CD2 TRP 8 54.056 17.119 8.759 1.00 0.00 C ATOM 59 NE1 TRP 8 54.913 19.142 8.055 1.00 0.00 N ATOM 60 CE2 TRP 8 54.866 17.782 7.803 1.00 0.00 C ATOM 61 CE3 TRP 8 53.811 15.722 8.640 1.00 0.00 C ATOM 62 CZ2 TRP 8 55.345 17.075 6.674 1.00 0.00 C ATOM 63 CZ3 TRP 8 54.309 15.047 7.527 1.00 0.00 C ATOM 64 CH2 TRP 8 55.049 15.718 6.548 1.00 0.00 H ATOM 65 N ASP 9 48.996 17.557 11.409 1.00 0.00 N ATOM 66 CA ASP 9 47.954 17.068 12.377 1.00 0.00 C ATOM 67 C ASP 9 46.750 16.312 11.681 1.00 0.00 C ATOM 68 O ASP 9 45.594 16.754 11.689 1.00 0.00 O ATOM 69 CB ASP 9 47.504 18.307 13.205 1.00 0.00 C ATOM 70 CG ASP 9 48.565 18.984 14.063 1.00 0.00 C ATOM 71 OD1 ASP 9 48.765 20.204 13.941 1.00 0.00 O ATOM 72 OD2 ASP 9 49.193 18.303 14.896 1.00 0.00 O ATOM 73 N VAL 10 47.026 15.143 11.083 1.00 0.00 N ATOM 74 CA VAL 10 46.071 14.421 10.182 1.00 0.00 C ATOM 75 C VAL 10 45.168 13.335 10.859 1.00 0.00 C ATOM 76 O VAL 10 45.638 12.446 11.572 1.00 0.00 O ATOM 77 CB VAL 10 46.835 13.842 8.931 1.00 0.00 C ATOM 78 CG1 VAL 10 47.567 14.915 8.091 1.00 0.00 C ATOM 79 CG2 VAL 10 47.836 12.699 9.213 1.00 0.00 C ATOM 80 N ALA 11 43.858 13.358 10.558 1.00 0.00 N ATOM 81 CA ALA 11 42.870 12.361 11.065 1.00 0.00 C ATOM 82 C ALA 11 41.643 12.205 10.094 1.00 0.00 C ATOM 83 O ALA 11 41.423 13.026 9.199 1.00 0.00 O ATOM 84 CB ALA 11 42.482 12.778 12.493 1.00 0.00 C ATOM 85 N LEU 12 40.843 11.131 10.252 1.00 0.00 N ATOM 86 CA LEU 12 39.652 10.827 9.386 1.00 0.00 C ATOM 87 C LEU 12 40.080 10.310 7.964 1.00 0.00 C ATOM 88 O LEU 12 40.386 9.120 7.848 1.00 0.00 O ATOM 89 CB LEU 12 38.549 11.927 9.535 1.00 0.00 C ATOM 90 CG LEU 12 37.102 11.552 9.112 1.00 0.00 C ATOM 91 CD1 LEU 12 36.073 12.120 10.104 1.00 0.00 C ATOM 92 CD2 LEU 12 36.755 12.047 7.700 1.00 0.00 C ATOM 93 N SER 13 40.164 11.195 6.951 1.00 0.00 N ATOM 94 CA SER 13 40.620 10.925 5.546 1.00 0.00 C ATOM 95 C SER 13 39.524 11.138 4.446 1.00 0.00 C ATOM 96 O SER 13 38.884 10.181 3.998 1.00 0.00 O ATOM 97 CB SER 13 41.508 9.678 5.264 1.00 0.00 C ATOM 98 OG SER 13 40.739 8.475 5.199 1.00 0.00 O ATOM 99 N ASP 14 39.365 12.388 3.980 1.00 0.00 N ATOM 100 CA ASP 14 38.452 12.747 2.861 1.00 0.00 C ATOM 101 C ASP 14 39.212 12.616 1.485 1.00 0.00 C ATOM 102 O ASP 14 40.292 13.186 1.281 1.00 0.00 O ATOM 103 CB ASP 14 37.945 14.203 3.072 1.00 0.00 C ATOM 104 CG ASP 14 36.894 14.497 4.143 1.00 0.00 C ATOM 105 OD1 ASP 14 36.204 13.570 4.623 1.00 0.00 O ATOM 106 OD2 ASP 14 36.668 15.695 4.385 1.00 0.00 O ATOM 107 N GLY 15 38.667 11.852 0.525 1.00 0.00 N ATOM 108 CA GLY 15 39.301 11.675 -0.817 1.00 0.00 C ATOM 109 C GLY 15 38.807 12.660 -1.891 1.00 0.00 C ATOM 110 O GLY 15 37.780 12.409 -2.525 1.00 0.00 O ATOM 111 N VAL 16 39.548 13.747 -2.150 1.00 0.00 N ATOM 112 CA VAL 16 39.081 14.818 -3.088 1.00 0.00 C ATOM 113 C VAL 16 39.342 14.518 -4.609 1.00 0.00 C ATOM 114 O VAL 16 40.427 14.737 -5.159 1.00 0.00 O ATOM 115 CB VAL 16 39.477 16.264 -2.623 1.00 0.00 C ATOM 116 CG1 VAL 16 38.993 16.586 -1.195 1.00 0.00 C ATOM 117 CG2 VAL 16 40.965 16.660 -2.683 1.00 0.00 C ATOM 118 N HIS 17 38.310 14.000 -5.283 1.00 0.00 N ATOM 119 CA HIS 17 38.279 13.759 -6.760 1.00 0.00 C ATOM 120 C HIS 17 37.278 14.784 -7.430 1.00 0.00 C ATOM 121 O HIS 17 36.997 15.837 -6.852 1.00 0.00 O ATOM 122 CB HIS 17 37.961 12.249 -6.980 1.00 0.00 C ATOM 123 CG HIS 17 39.085 11.280 -6.613 1.00 0.00 C ATOM 124 ND1 HIS 17 39.185 10.675 -5.369 1.00 0.00 N ATOM 125 CD2 HIS 17 40.079 10.799 -7.482 1.00 0.00 C ATOM 126 CE1 HIS 17 40.266 9.863 -5.603 1.00 0.00 C ATOM 127 NE2 HIS 17 40.877 9.884 -6.825 1.00 0.00 N ATOM 128 N LYS 18 36.766 14.566 -8.660 1.00 0.00 N ATOM 129 CA LYS 18 35.761 15.490 -9.294 1.00 0.00 C ATOM 130 C LYS 18 34.270 15.069 -8.982 1.00 0.00 C ATOM 131 O LYS 18 33.484 14.766 -9.883 1.00 0.00 O ATOM 132 CB LYS 18 36.088 15.611 -10.812 1.00 0.00 C ATOM 133 CG LYS 18 37.398 16.350 -11.222 1.00 0.00 C ATOM 134 CD LYS 18 37.279 17.869 -11.481 1.00 0.00 C ATOM 135 CE LYS 18 36.529 18.217 -12.781 1.00 0.00 C ATOM 136 NZ LYS 18 36.387 19.692 -12.932 1.00 0.00 N ATOM 137 N ILE 19 33.880 15.059 -7.695 1.00 0.00 N ATOM 138 CA ILE 19 32.508 14.666 -7.226 1.00 0.00 C ATOM 139 C ILE 19 32.049 15.677 -6.111 1.00 0.00 C ATOM 140 O ILE 19 32.860 16.153 -5.308 1.00 0.00 O ATOM 141 CB ILE 19 32.485 13.163 -6.728 1.00 0.00 C ATOM 142 CG1 ILE 19 32.857 12.106 -7.817 1.00 0.00 C ATOM 143 CG2 ILE 19 31.126 12.722 -6.119 1.00 0.00 C ATOM 144 CD1 ILE 19 34.303 11.594 -7.729 1.00 0.00 C ATOM 145 N GLU 20 30.742 15.996 -6.026 1.00 0.00 N ATOM 146 CA GLU 20 30.205 16.879 -4.948 1.00 0.00 C ATOM 147 C GLU 20 30.018 16.071 -3.618 1.00 0.00 C ATOM 148 O GLU 20 28.987 15.428 -3.390 1.00 0.00 O ATOM 149 CB GLU 20 28.897 17.563 -5.412 1.00 0.00 C ATOM 150 CG GLU 20 29.048 18.547 -6.601 1.00 0.00 C ATOM 151 CD GLU 20 27.728 19.007 -7.153 1.00 0.00 C ATOM 152 OE1 GLU 20 27.290 20.127 -6.836 1.00 0.00 O ATOM 153 OE2 GLU 20 27.106 18.241 -7.912 1.00 0.00 O ATOM 154 N PHE 21 31.023 16.118 -2.737 1.00 0.00 N ATOM 155 CA PHE 21 31.056 15.302 -1.485 1.00 0.00 C ATOM 156 C PHE 21 30.036 15.730 -0.372 1.00 0.00 C ATOM 157 O PHE 21 29.595 16.880 -0.297 1.00 0.00 O ATOM 158 CB PHE 21 32.525 15.278 -0.958 1.00 0.00 C ATOM 159 CG PHE 21 33.556 14.623 -1.903 1.00 0.00 C ATOM 160 CD1 PHE 21 34.411 15.419 -2.673 1.00 0.00 C ATOM 161 CD2 PHE 21 33.540 13.240 -2.105 1.00 0.00 C ATOM 162 CE1 PHE 21 35.207 14.842 -3.661 1.00 0.00 C ATOM 163 CE2 PHE 21 34.337 12.665 -3.091 1.00 0.00 C ATOM 164 CZ PHE 21 35.159 13.467 -3.875 1.00 0.00 C ATOM 165 N GLU 22 29.616 14.762 0.454 1.00 0.00 N ATOM 166 CA GLU 22 28.699 14.997 1.604 1.00 0.00 C ATOM 167 C GLU 22 29.139 14.029 2.752 1.00 0.00 C ATOM 168 O GLU 22 28.793 12.843 2.748 1.00 0.00 O ATOM 169 CB GLU 22 27.231 14.786 1.145 1.00 0.00 C ATOM 170 CG GLU 22 26.173 15.058 2.251 1.00 0.00 C ATOM 171 CD GLU 22 24.826 14.434 2.001 1.00 0.00 C ATOM 172 OE1 GLU 22 24.763 13.203 1.836 1.00 0.00 O ATOM 173 OE2 GLU 22 23.803 15.142 1.994 1.00 0.00 O ATOM 174 N HIS 23 29.883 14.535 3.742 1.00 0.00 N ATOM 175 CA HIS 23 30.486 13.698 4.824 1.00 0.00 C ATOM 176 C HIS 23 30.047 14.068 6.279 1.00 0.00 C ATOM 177 O HIS 23 29.982 15.240 6.658 1.00 0.00 O ATOM 178 CB HIS 23 32.027 13.679 4.631 1.00 0.00 C ATOM 179 CG HIS 23 32.763 15.023 4.617 1.00 0.00 C ATOM 180 ND1 HIS 23 32.975 15.744 3.453 1.00 0.00 N ATOM 181 CD2 HIS 23 33.448 15.597 5.694 1.00 0.00 C ATOM 182 CE1 HIS 23 33.806 16.708 3.951 1.00 0.00 C ATOM 183 NE2 HIS 23 34.148 16.717 5.280 1.00 0.00 N ATOM 184 N GLY 24 29.780 13.040 7.101 1.00 0.00 N ATOM 185 CA GLY 24 29.372 13.206 8.519 1.00 0.00 C ATOM 186 C GLY 24 30.547 13.162 9.513 1.00 0.00 C ATOM 187 O GLY 24 31.162 12.111 9.717 1.00 0.00 O ATOM 188 N THR 25 30.839 14.298 10.146 1.00 0.00 N ATOM 189 CA THR 25 31.940 14.430 11.147 1.00 0.00 C ATOM 190 C THR 25 31.404 14.769 12.578 1.00 0.00 C ATOM 191 O THR 25 30.485 15.577 12.761 1.00 0.00 O ATOM 192 CB THR 25 33.011 15.448 10.635 1.00 0.00 C ATOM 193 OG1 THR 25 34.125 15.467 11.522 1.00 0.00 O ATOM 194 CG2 THR 25 32.576 16.915 10.469 1.00 0.00 C ATOM 195 N THR 26 32.025 14.182 13.612 1.00 0.00 N ATOM 196 CA THR 26 31.696 14.497 15.036 1.00 0.00 C ATOM 197 C THR 26 32.224 15.925 15.429 1.00 0.00 C ATOM 198 O THR 26 33.281 16.375 14.969 1.00 0.00 O ATOM 199 CB THR 26 32.239 13.338 15.935 1.00 0.00 C ATOM 200 OG1 THR 26 31.530 12.137 15.645 1.00 0.00 O ATOM 201 CG2 THR 26 32.079 13.540 17.449 1.00 0.00 C ATOM 202 N SER 27 31.467 16.639 16.279 1.00 0.00 N ATOM 203 CA SER 27 31.810 18.008 16.759 1.00 0.00 C ATOM 204 C SER 27 33.199 18.152 17.473 1.00 0.00 C ATOM 205 O SER 27 33.393 17.727 18.615 1.00 0.00 O ATOM 206 CB SER 27 30.644 18.466 17.662 1.00 0.00 C ATOM 207 OG SER 27 30.466 17.628 18.810 1.00 0.00 O ATOM 208 N GLY 28 34.159 18.756 16.765 1.00 0.00 N ATOM 209 CA GLY 28 35.553 18.918 17.258 1.00 0.00 C ATOM 210 C GLY 28 36.496 17.760 16.875 1.00 0.00 C ATOM 211 O GLY 28 37.025 17.074 17.752 1.00 0.00 O ATOM 212 N LYS 29 36.701 17.542 15.570 1.00 0.00 N ATOM 213 CA LYS 29 37.586 16.464 15.049 1.00 0.00 C ATOM 214 C LYS 29 38.321 16.896 13.740 1.00 0.00 C ATOM 215 O LYS 29 37.743 17.561 12.873 1.00 0.00 O ATOM 216 CB LYS 29 36.779 15.138 14.844 1.00 0.00 C ATOM 217 CG LYS 29 36.715 14.150 16.039 1.00 0.00 C ATOM 218 CD LYS 29 38.108 13.848 16.638 1.00 0.00 C ATOM 219 CE LYS 29 38.273 12.485 17.313 1.00 0.00 C ATOM 220 NZ LYS 29 39.642 12.429 17.888 1.00 0.00 N ATOM 221 N ARG 30 39.601 16.498 13.596 1.00 0.00 N ATOM 222 CA ARG 30 40.418 16.826 12.391 1.00 0.00 C ATOM 223 C ARG 30 40.110 15.918 11.160 1.00 0.00 C ATOM 224 O ARG 30 39.970 14.696 11.249 1.00 0.00 O ATOM 225 CB ARG 30 41.923 16.958 12.765 1.00 0.00 C ATOM 226 CG ARG 30 42.192 18.342 13.401 1.00 0.00 C ATOM 227 CD ARG 30 43.628 18.661 13.819 1.00 0.00 C ATOM 228 NE ARG 30 43.546 19.969 14.538 1.00 0.00 N ATOM 229 CZ ARG 30 44.126 20.241 15.701 1.00 0.00 C ATOM 230 NH1 ARG 30 45.084 19.530 16.223 1.00 0.00 H ATOM 231 NH2 ARG 30 43.722 21.271 16.363 1.00 0.00 H ATOM 232 N VAL 31 39.995 16.584 10.010 1.00 0.00 N ATOM 233 CA VAL 31 39.541 15.976 8.737 1.00 0.00 C ATOM 234 C VAL 31 40.634 16.240 7.655 1.00 0.00 C ATOM 235 O VAL 31 40.791 17.371 7.184 1.00 0.00 O ATOM 236 CB VAL 31 38.123 16.592 8.448 1.00 0.00 C ATOM 237 CG1 VAL 31 37.597 16.313 7.037 1.00 0.00 C ATOM 238 CG2 VAL 31 37.027 16.095 9.421 1.00 0.00 C ATOM 239 N VAL 32 41.403 15.209 7.266 1.00 0.00 N ATOM 240 CA VAL 32 42.474 15.351 6.236 1.00 0.00 C ATOM 241 C VAL 32 41.957 15.167 4.769 1.00 0.00 C ATOM 242 O VAL 32 41.728 14.043 4.315 1.00 0.00 O ATOM 243 CB VAL 32 43.732 14.494 6.612 1.00 0.00 C ATOM 244 CG1 VAL 32 43.592 12.957 6.539 1.00 0.00 C ATOM 245 CG2 VAL 32 44.944 14.887 5.744 1.00 0.00 C ATOM 246 N TYR 33 41.818 16.270 4.016 1.00 0.00 N ATOM 247 CA TYR 33 41.442 16.228 2.579 1.00 0.00 C ATOM 248 C TYR 33 42.723 15.988 1.701 1.00 0.00 C ATOM 249 O TYR 33 43.678 16.773 1.723 1.00 0.00 O ATOM 250 CB TYR 33 40.530 17.443 2.241 1.00 0.00 C ATOM 251 CG TYR 33 41.146 18.820 1.937 1.00 0.00 C ATOM 252 CD1 TYR 33 41.179 19.817 2.916 1.00 0.00 C ATOM 253 CD2 TYR 33 41.586 19.118 0.641 1.00 0.00 C ATOM 254 CE1 TYR 33 41.661 21.088 2.608 1.00 0.00 C ATOM 255 CE2 TYR 33 42.065 20.390 0.334 1.00 0.00 C ATOM 256 CZ TYR 33 42.101 21.373 1.318 1.00 0.00 C ATOM 257 OH TYR 33 42.599 22.610 1.012 1.00 0.00 H ATOM 258 N VAL 34 42.767 14.857 0.979 1.00 0.00 N ATOM 259 CA VAL 34 43.956 14.437 0.176 1.00 0.00 C ATOM 260 C VAL 34 43.643 14.392 -1.355 1.00 0.00 C ATOM 261 O VAL 34 42.730 13.683 -1.800 1.00 0.00 O ATOM 262 CB VAL 34 44.547 13.108 0.764 1.00 0.00 C ATOM 263 CG1 VAL 34 43.630 11.866 0.715 1.00 0.00 C ATOM 264 CG2 VAL 34 45.910 12.740 0.135 1.00 0.00 C ATOM 265 N ASP 35 44.425 15.122 -2.167 1.00 0.00 N ATOM 266 CA ASP 35 44.217 15.180 -3.636 1.00 0.00 C ATOM 267 C ASP 35 44.719 13.915 -4.412 1.00 0.00 C ATOM 268 O ASP 35 45.917 13.631 -4.493 1.00 0.00 O ATOM 269 CB ASP 35 44.831 16.511 -4.143 1.00 0.00 C ATOM 270 CG ASP 35 44.593 16.784 -5.624 1.00 0.00 C ATOM 271 OD1 ASP 35 43.446 16.628 -6.099 1.00 0.00 O ATOM 272 OD2 ASP 35 45.558 17.103 -6.337 1.00 0.00 O ATOM 273 N GLY 36 43.784 13.170 -5.023 1.00 0.00 N ATOM 274 CA GLY 36 44.132 12.032 -5.924 1.00 0.00 C ATOM 275 C GLY 36 44.176 12.427 -7.421 1.00 0.00 C ATOM 276 O GLY 36 43.502 11.809 -8.245 1.00 0.00 O ATOM 277 N LYS 37 44.971 13.453 -7.763 1.00 0.00 N ATOM 278 CA LYS 37 45.081 14.008 -9.141 1.00 0.00 C ATOM 279 C LYS 37 46.515 13.839 -9.748 1.00 0.00 C ATOM 280 O LYS 37 47.509 13.561 -9.069 1.00 0.00 O ATOM 281 CB LYS 37 44.613 15.495 -9.031 1.00 0.00 C ATOM 282 CG LYS 37 44.309 16.308 -10.314 1.00 0.00 C ATOM 283 CD LYS 37 43.173 15.732 -11.186 1.00 0.00 C ATOM 284 CE LYS 37 42.894 16.576 -12.439 1.00 0.00 C ATOM 285 NZ LYS 37 41.931 15.878 -13.331 1.00 0.00 N ATOM 286 N GLU 38 46.586 14.003 -11.071 1.00 0.00 N ATOM 287 CA GLU 38 47.827 13.873 -11.878 1.00 0.00 C ATOM 288 C GLU 38 48.855 15.053 -11.717 1.00 0.00 C ATOM 289 O GLU 38 50.057 14.824 -11.547 1.00 0.00 O ATOM 290 CB GLU 38 47.389 13.733 -13.377 1.00 0.00 C ATOM 291 CG GLU 38 46.381 12.622 -13.796 1.00 0.00 C ATOM 292 CD GLU 38 44.936 12.845 -13.391 1.00 0.00 C ATOM 293 OE1 GLU 38 44.444 12.121 -12.505 1.00 0.00 O ATOM 294 OE2 GLU 38 44.275 13.755 -13.919 1.00 0.00 O ATOM 295 N GLU 39 48.381 16.307 -11.809 1.00 0.00 N ATOM 296 CA GLU 39 49.229 17.534 -11.773 1.00 0.00 C ATOM 297 C GLU 39 48.579 18.768 -11.048 1.00 0.00 C ATOM 298 O GLU 39 49.218 19.364 -10.179 1.00 0.00 O ATOM 299 CB GLU 39 49.705 17.839 -13.230 1.00 0.00 C ATOM 300 CG GLU 39 48.616 18.329 -14.229 1.00 0.00 C ATOM 301 CD GLU 39 48.882 18.182 -15.702 1.00 0.00 C ATOM 302 OE1 GLU 39 47.945 17.805 -16.429 1.00 0.00 O ATOM 303 OE2 GLU 39 49.987 18.490 -16.176 1.00 0.00 O ATOM 304 N ILE 40 47.340 19.176 -11.395 1.00 0.00 N ATOM 305 CA ILE 40 46.689 20.407 -10.840 1.00 0.00 C ATOM 306 C ILE 40 46.072 20.265 -9.397 1.00 0.00 C ATOM 307 O ILE 40 45.569 19.220 -8.979 1.00 0.00 O ATOM 308 CB ILE 40 45.671 21.040 -11.861 1.00 0.00 C ATOM 309 CG1 ILE 40 44.456 20.133 -12.203 1.00 0.00 C ATOM 310 CG2 ILE 40 46.358 21.593 -13.136 1.00 0.00 C ATOM 311 CD1 ILE 40 43.328 20.829 -12.982 1.00 0.00 C ATOM 312 N ARG 41 46.084 21.395 -8.688 1.00 0.00 N ATOM 313 CA ARG 41 45.603 21.557 -7.289 1.00 0.00 C ATOM 314 C ARG 41 44.076 21.411 -6.923 1.00 0.00 C ATOM 315 O ARG 41 43.189 21.409 -7.782 1.00 0.00 O ATOM 316 CB ARG 41 46.140 22.979 -6.896 1.00 0.00 C ATOM 317 CG ARG 41 45.821 24.230 -7.784 1.00 0.00 C ATOM 318 CD ARG 41 44.349 24.398 -8.221 1.00 0.00 C ATOM 319 NE ARG 41 44.219 25.454 -9.255 1.00 0.00 N ATOM 320 CZ ARG 41 43.874 26.713 -9.038 1.00 0.00 C ATOM 321 NH1 ARG 41 43.540 27.208 -7.888 1.00 0.00 H ATOM 322 NH2 ARG 41 43.857 27.509 -10.046 1.00 0.00 H ATOM 323 N LYS 42 43.797 21.355 -5.605 1.00 0.00 N ATOM 324 CA LYS 42 42.419 21.377 -5.030 1.00 0.00 C ATOM 325 C LYS 42 42.427 22.105 -3.633 1.00 0.00 C ATOM 326 O LYS 42 43.271 21.834 -2.770 1.00 0.00 O ATOM 327 CB LYS 42 41.814 19.947 -4.937 1.00 0.00 C ATOM 328 CG LYS 42 41.426 19.322 -6.299 1.00 0.00 C ATOM 329 CD LYS 42 40.278 18.294 -6.219 1.00 0.00 C ATOM 330 CE LYS 42 40.152 17.427 -7.486 1.00 0.00 C ATOM 331 NZ LYS 42 41.101 16.285 -7.397 1.00 0.00 N ATOM 332 N GLU 43 41.464 23.017 -3.408 1.00 0.00 N ATOM 333 CA GLU 43 41.365 23.840 -2.165 1.00 0.00 C ATOM 334 C GLU 43 39.977 23.840 -1.427 1.00 0.00 C ATOM 335 O GLU 43 38.917 23.604 -2.016 1.00 0.00 O ATOM 336 CB GLU 43 41.769 25.292 -2.559 1.00 0.00 C ATOM 337 CG GLU 43 40.859 26.055 -3.573 1.00 0.00 C ATOM 338 CD GLU 43 41.241 25.932 -5.033 1.00 0.00 C ATOM 339 OE1 GLU 43 40.875 24.937 -5.689 1.00 0.00 O ATOM 340 OE2 GLU 43 41.867 26.871 -5.561 1.00 0.00 O ATOM 341 N TRP 44 39.993 24.199 -0.130 1.00 0.00 N ATOM 342 CA TRP 44 38.766 24.314 0.710 1.00 0.00 C ATOM 343 C TRP 44 38.311 25.810 0.824 1.00 0.00 C ATOM 344 O TRP 44 38.770 26.551 1.702 1.00 0.00 O ATOM 345 CB TRP 44 39.087 23.674 2.096 1.00 0.00 C ATOM 346 CG TRP 44 38.027 22.747 2.703 1.00 0.00 C ATOM 347 CD1 TRP 44 37.477 22.877 3.995 1.00 0.00 C ATOM 348 CD2 TRP 44 37.698 21.465 2.292 1.00 0.00 C ATOM 349 NE1 TRP 44 36.812 21.703 4.405 1.00 0.00 N ATOM 350 CE2 TRP 44 37.003 20.829 3.353 1.00 0.00 C ATOM 351 CE3 TRP 44 38.034 20.740 1.120 1.00 0.00 C ATOM 352 CZ2 TRP 44 36.701 19.450 3.277 1.00 0.00 C ATOM 353 CZ3 TRP 44 37.667 19.398 1.045 1.00 0.00 C ATOM 354 CH2 TRP 44 37.038 18.752 2.117 1.00 0.00 H ATOM 355 N MET 45 37.411 26.274 -0.063 1.00 0.00 N ATOM 356 CA MET 45 36.882 27.671 0.003 1.00 0.00 C ATOM 357 C MET 45 35.670 27.731 0.990 1.00 0.00 C ATOM 358 O MET 45 34.533 27.437 0.621 1.00 0.00 O ATOM 359 CB MET 45 36.582 28.167 -1.431 1.00 0.00 C ATOM 360 CG MET 45 36.230 29.668 -1.521 1.00 0.00 C ATOM 361 SD MET 45 36.252 30.199 -3.241 1.00 0.00 S ATOM 362 CE MET 45 37.992 30.631 -3.437 1.00 0.00 C ATOM 363 N PHE 46 35.936 28.122 2.243 1.00 0.00 N ATOM 364 CA PHE 46 34.950 28.099 3.363 1.00 0.00 C ATOM 365 C PHE 46 33.639 28.955 3.209 1.00 0.00 C ATOM 366 O PHE 46 33.572 30.119 3.619 1.00 0.00 O ATOM 367 CB PHE 46 35.739 28.507 4.643 1.00 0.00 C ATOM 368 CG PHE 46 36.741 27.490 5.213 1.00 0.00 C ATOM 369 CD1 PHE 46 36.348 26.573 6.192 1.00 0.00 C ATOM 370 CD2 PHE 46 38.073 27.512 4.791 1.00 0.00 C ATOM 371 CE1 PHE 46 37.278 25.695 6.744 1.00 0.00 C ATOM 372 CE2 PHE 46 39.001 26.639 5.344 1.00 0.00 C ATOM 373 CZ PHE 46 38.606 25.733 6.322 1.00 0.00 C ATOM 374 N LYS 47 32.558 28.357 2.689 1.00 0.00 N ATOM 375 CA LYS 47 31.243 29.046 2.535 1.00 0.00 C ATOM 376 C LYS 47 30.339 28.773 3.792 1.00 0.00 C ATOM 377 O LYS 47 29.446 27.922 3.793 1.00 0.00 O ATOM 378 CB LYS 47 30.611 28.684 1.157 1.00 0.00 C ATOM 379 CG LYS 47 31.463 29.063 -0.088 1.00 0.00 C ATOM 380 CD LYS 47 30.676 29.032 -1.414 1.00 0.00 C ATOM 381 CE LYS 47 31.504 29.522 -2.621 1.00 0.00 C ATOM 382 NZ LYS 47 30.690 29.348 -3.854 1.00 0.00 N ATOM 383 N LEU 48 30.622 29.515 4.878 1.00 0.00 N ATOM 384 CA LEU 48 29.894 29.431 6.178 1.00 0.00 C ATOM 385 C LEU 48 29.629 30.879 6.717 1.00 0.00 C ATOM 386 O LEU 48 28.655 31.528 6.331 1.00 0.00 O ATOM 387 CB LEU 48 30.546 28.434 7.210 1.00 0.00 C ATOM 388 CG LEU 48 32.075 28.117 7.214 1.00 0.00 C ATOM 389 CD1 LEU 48 33.010 29.332 7.338 1.00 0.00 C ATOM 390 CD2 LEU 48 32.417 27.172 8.380 1.00 0.00 C ATOM 391 N VAL 49 30.489 31.366 7.614 1.00 0.00 N ATOM 392 CA VAL 49 30.430 32.729 8.231 1.00 0.00 C ATOM 393 C VAL 49 31.347 33.764 7.481 1.00 0.00 C ATOM 394 O VAL 49 30.895 34.859 7.135 1.00 0.00 O ATOM 395 CB VAL 49 30.696 32.628 9.778 1.00 0.00 C ATOM 396 CG1 VAL 49 29.560 31.906 10.546 1.00 0.00 C ATOM 397 CG2 VAL 49 32.032 31.984 10.222 1.00 0.00 C ATOM 398 N GLY 50 32.613 33.402 7.219 1.00 0.00 N ATOM 399 CA GLY 50 33.598 34.222 6.467 1.00 0.00 C ATOM 400 C GLY 50 34.459 33.329 5.544 1.00 0.00 C ATOM 401 O GLY 50 34.942 32.276 5.981 1.00 0.00 O ATOM 402 N LYS 51 34.684 33.740 4.285 1.00 0.00 N ATOM 403 CA LYS 51 35.473 32.936 3.300 1.00 0.00 C ATOM 404 C LYS 51 37.025 32.952 3.551 1.00 0.00 C ATOM 405 O LYS 51 37.789 33.658 2.884 1.00 0.00 O ATOM 406 CB LYS 51 35.086 33.368 1.853 1.00 0.00 C ATOM 407 CG LYS 51 33.653 33.017 1.374 1.00 0.00 C ATOM 408 CD LYS 51 33.427 33.421 -0.103 1.00 0.00 C ATOM 409 CE LYS 51 31.972 33.209 -0.566 1.00 0.00 C ATOM 410 NZ LYS 51 31.820 33.671 -1.973 1.00 0.00 N ATOM 411 N GLU 52 37.489 32.143 4.514 1.00 0.00 N ATOM 412 CA GLU 52 38.937 31.992 4.856 1.00 0.00 C ATOM 413 C GLU 52 39.634 30.831 4.049 1.00 0.00 C ATOM 414 O GLU 52 40.229 29.908 4.611 1.00 0.00 O ATOM 415 CB GLU 52 39.024 31.907 6.412 1.00 0.00 C ATOM 416 CG GLU 52 38.413 30.663 7.132 1.00 0.00 C ATOM 417 CD GLU 52 38.451 30.705 8.649 1.00 0.00 C ATOM 418 OE1 GLU 52 37.371 30.622 9.268 1.00 0.00 O ATOM 419 OE2 GLU 52 39.537 30.843 9.240 1.00 0.00 O ATOM 420 N THR 53 39.603 30.925 2.705 1.00 0.00 N ATOM 421 CA THR 53 40.095 29.872 1.760 1.00 0.00 C ATOM 422 C THR 53 41.511 29.260 2.041 1.00 0.00 C ATOM 423 O THR 53 42.482 29.996 2.254 1.00 0.00 O ATOM 424 CB THR 53 39.903 30.383 0.298 1.00 0.00 C ATOM 425 OG1 THR 53 39.966 29.289 -0.608 1.00 0.00 O ATOM 426 CG2 THR 53 40.888 31.450 -0.208 1.00 0.00 C ATOM 427 N PHE 54 41.613 27.920 2.073 1.00 0.00 N ATOM 428 CA PHE 54 42.885 27.226 2.414 1.00 0.00 C ATOM 429 C PHE 54 43.928 27.113 1.245 1.00 0.00 C ATOM 430 O PHE 54 43.627 27.314 0.063 1.00 0.00 O ATOM 431 CB PHE 54 42.509 25.855 3.067 1.00 0.00 C ATOM 432 CG PHE 54 43.611 25.282 3.980 1.00 0.00 C ATOM 433 CD1 PHE 54 43.978 25.980 5.135 1.00 0.00 C ATOM 434 CD2 PHE 54 44.334 24.143 3.612 1.00 0.00 C ATOM 435 CE1 PHE 54 45.067 25.563 5.895 1.00 0.00 C ATOM 436 CE2 PHE 54 45.422 23.725 4.374 1.00 0.00 C ATOM 437 CZ PHE 54 45.785 24.439 5.510 1.00 0.00 C ATOM 438 N TYR 55 45.176 26.778 1.610 1.00 0.00 N ATOM 439 CA TYR 55 46.309 26.595 0.661 1.00 0.00 C ATOM 440 C TYR 55 46.051 25.462 -0.394 1.00 0.00 C ATOM 441 O TYR 55 45.610 24.353 -0.065 1.00 0.00 O ATOM 442 CB TYR 55 47.606 26.324 1.480 1.00 0.00 C ATOM 443 CG TYR 55 48.049 27.415 2.475 1.00 0.00 C ATOM 444 CD1 TYR 55 47.874 27.225 3.850 1.00 0.00 C ATOM 445 CD2 TYR 55 48.589 28.618 2.012 1.00 0.00 C ATOM 446 CE1 TYR 55 48.217 28.233 4.749 1.00 0.00 C ATOM 447 CE2 TYR 55 48.935 29.623 2.913 1.00 0.00 C ATOM 448 CZ TYR 55 48.744 29.431 4.277 1.00 0.00 C ATOM 449 OH TYR 55 49.081 30.425 5.154 1.00 0.00 H ATOM 450 N VAL 56 46.333 25.762 -1.670 1.00 0.00 N ATOM 451 CA VAL 56 46.025 24.855 -2.817 1.00 0.00 C ATOM 452 C VAL 56 46.927 23.562 -2.848 1.00 0.00 C ATOM 453 O VAL 56 48.143 23.643 -3.057 1.00 0.00 O ATOM 454 CB VAL 56 45.984 25.679 -4.159 1.00 0.00 C ATOM 455 CG1 VAL 56 45.089 26.943 -4.151 1.00 0.00 C ATOM 456 CG2 VAL 56 47.359 26.090 -4.736 1.00 0.00 C ATOM 457 N GLY 57 46.340 22.372 -2.628 1.00 0.00 N ATOM 458 CA GLY 57 47.104 21.091 -2.570 1.00 0.00 C ATOM 459 C GLY 57 47.041 20.231 -3.849 1.00 0.00 C ATOM 460 O GLY 57 45.952 19.818 -4.247 1.00 0.00 O ATOM 461 N ALA 58 48.194 19.933 -4.464 1.00 0.00 N ATOM 462 CA ALA 58 48.263 19.149 -5.730 1.00 0.00 C ATOM 463 C ALA 58 48.968 17.757 -5.637 1.00 0.00 C ATOM 464 O ALA 58 50.089 17.646 -5.129 1.00 0.00 O ATOM 465 CB ALA 58 49.033 20.052 -6.711 1.00 0.00 C ATOM 466 N ALA 59 48.318 16.710 -6.175 1.00 0.00 N ATOM 467 CA ALA 59 48.849 15.320 -6.292 1.00 0.00 C ATOM 468 C ALA 59 49.486 14.676 -5.011 1.00 0.00 C ATOM 469 O ALA 59 50.654 14.909 -4.678 1.00 0.00 O ATOM 470 CB ALA 59 49.749 15.265 -7.541 1.00 0.00 C ATOM 471 N LYS 60 48.703 13.862 -4.281 1.00 0.00 N ATOM 472 CA LYS 60 49.107 13.258 -2.968 1.00 0.00 C ATOM 473 C LYS 60 49.386 14.290 -1.800 1.00 0.00 C ATOM 474 O LYS 60 50.043 13.956 -0.808 1.00 0.00 O ATOM 475 CB LYS 60 50.231 12.179 -3.117 1.00 0.00 C ATOM 476 CG LYS 60 49.910 10.870 -3.882 1.00 0.00 C ATOM 477 CD LYS 60 49.916 11.024 -5.417 1.00 0.00 C ATOM 478 CE LYS 60 49.904 9.668 -6.138 1.00 0.00 C ATOM 479 NZ LYS 60 49.872 9.913 -7.604 1.00 0.00 N ATOM 480 N THR 61 48.856 15.523 -1.877 1.00 0.00 N ATOM 481 CA THR 61 49.076 16.582 -0.854 1.00 0.00 C ATOM 482 C THR 61 47.900 16.555 0.171 1.00 0.00 C ATOM 483 O THR 61 46.731 16.757 -0.173 1.00 0.00 O ATOM 484 CB THR 61 49.278 17.959 -1.549 1.00 0.00 C ATOM 485 OG1 THR 61 50.361 17.896 -2.476 1.00 0.00 O ATOM 486 CG2 THR 61 49.650 19.105 -0.593 1.00 0.00 C ATOM 487 N LYS 62 48.240 16.266 1.431 1.00 0.00 N ATOM 488 CA LYS 62 47.263 16.183 2.548 1.00 0.00 C ATOM 489 C LYS 62 47.053 17.565 3.255 1.00 0.00 C ATOM 490 O LYS 62 48.019 18.244 3.611 1.00 0.00 O ATOM 491 CB LYS 62 47.814 15.124 3.544 1.00 0.00 C ATOM 492 CG LYS 62 47.726 13.647 3.085 1.00 0.00 C ATOM 493 CD LYS 62 48.179 12.674 4.184 1.00 0.00 C ATOM 494 CE LYS 62 48.184 11.199 3.733 1.00 0.00 C ATOM 495 NZ LYS 62 48.464 10.404 4.954 1.00 0.00 N ATOM 496 N ALA 63 45.793 17.953 3.488 1.00 0.00 N ATOM 497 CA ALA 63 45.432 19.233 4.159 1.00 0.00 C ATOM 498 C ALA 63 44.389 18.983 5.296 1.00 0.00 C ATOM 499 O ALA 63 43.271 18.531 5.043 1.00 0.00 O ATOM 500 CB ALA 63 44.924 20.146 3.034 1.00 0.00 C ATOM 501 N THR 64 44.757 19.246 6.560 1.00 0.00 N ATOM 502 CA THR 64 43.892 18.946 7.747 1.00 0.00 C ATOM 503 C THR 64 43.030 20.148 8.279 1.00 0.00 C ATOM 504 O THR 64 43.491 21.290 8.361 1.00 0.00 O ATOM 505 CB THR 64 44.789 18.248 8.816 1.00 0.00 C ATOM 506 OG1 THR 64 43.985 17.706 9.857 1.00 0.00 O ATOM 507 CG2 THR 64 45.846 19.138 9.480 1.00 0.00 C ATOM 508 N ILE 65 41.770 19.872 8.655 1.00 0.00 N ATOM 509 CA ILE 65 40.801 20.898 9.156 1.00 0.00 C ATOM 510 C ILE 65 39.992 20.363 10.386 1.00 0.00 C ATOM 511 O ILE 65 39.259 19.377 10.279 1.00 0.00 O ATOM 512 CB ILE 65 39.879 21.445 7.994 1.00 0.00 C ATOM 513 CG1 ILE 65 38.791 22.478 8.414 1.00 0.00 C ATOM 514 CG2 ILE 65 39.183 20.371 7.120 1.00 0.00 C ATOM 515 CD1 ILE 65 39.315 23.679 9.211 1.00 0.00 C ATOM 516 N ASN 66 40.092 21.013 11.562 1.00 0.00 N ATOM 517 CA ASN 66 39.262 20.661 12.751 1.00 0.00 C ATOM 518 C ASN 66 37.843 21.286 12.612 1.00 0.00 C ATOM 519 O ASN 66 37.685 22.506 12.677 1.00 0.00 O ATOM 520 CB ASN 66 39.986 21.135 14.024 1.00 0.00 C ATOM 521 CG ASN 66 39.398 20.594 15.324 1.00 0.00 C ATOM 522 OD1 ASN 66 39.582 19.444 15.703 1.00 0.00 O ATOM 523 ND2 ASN 66 38.662 21.404 16.027 1.00 0.00 N ATOM 524 N ILE 67 36.811 20.454 12.451 1.00 0.00 N ATOM 525 CA ILE 67 35.432 20.948 12.177 1.00 0.00 C ATOM 526 C ILE 67 34.584 20.904 13.500 1.00 0.00 C ATOM 527 O ILE 67 34.021 19.868 13.871 1.00 0.00 O ATOM 528 CB ILE 67 34.867 20.193 10.918 1.00 0.00 C ATOM 529 CG1 ILE 67 35.754 20.365 9.641 1.00 0.00 C ATOM 530 CG2 ILE 67 33.443 20.691 10.603 1.00 0.00 C ATOM 531 CD1 ILE 67 35.348 19.575 8.389 1.00 0.00 C ATOM 532 N ASP 68 34.483 22.059 14.188 1.00 0.00 N ATOM 533 CA ASP 68 33.788 22.179 15.501 1.00 0.00 C ATOM 534 C ASP 68 32.334 22.771 15.456 1.00 0.00 C ATOM 535 O ASP 68 31.389 22.036 15.751 1.00 0.00 O ATOM 536 CB ASP 68 34.800 22.898 16.434 1.00 0.00 C ATOM 537 CG ASP 68 34.346 23.101 17.868 1.00 0.00 C ATOM 538 OD1 ASP 68 34.906 22.478 18.792 1.00 0.00 O ATOM 539 OD2 ASP 68 33.495 23.979 18.110 1.00 0.00 O ATOM 540 N ALA 69 32.149 24.062 15.097 1.00 0.00 N ATOM 541 CA ALA 69 30.828 24.761 15.156 1.00 0.00 C ATOM 542 C ALA 69 29.606 24.026 14.508 1.00 0.00 C ATOM 543 O ALA 69 29.469 24.014 13.288 1.00 0.00 O ATOM 544 CB ALA 69 31.063 26.160 14.549 1.00 0.00 C ATOM 545 N ILE 70 28.710 23.452 15.326 1.00 0.00 N ATOM 546 CA ILE 70 27.598 22.557 14.863 1.00 0.00 C ATOM 547 C ILE 70 26.589 23.212 13.852 1.00 0.00 C ATOM 548 O ILE 70 25.974 24.234 14.159 1.00 0.00 O ATOM 549 CB ILE 70 26.951 21.874 16.126 1.00 0.00 C ATOM 550 CG1 ILE 70 27.956 20.884 16.799 1.00 0.00 C ATOM 551 CG2 ILE 70 25.618 21.130 15.832 1.00 0.00 C ATOM 552 CD1 ILE 70 27.593 20.455 18.224 1.00 0.00 C ATOM 553 N SER 71 26.468 22.602 12.655 1.00 0.00 N ATOM 554 CA SER 71 25.550 23.007 11.543 1.00 0.00 C ATOM 555 C SER 71 25.898 22.123 10.274 1.00 0.00 C ATOM 556 O SER 71 25.834 20.890 10.330 1.00 0.00 O ATOM 557 CB SER 71 25.427 24.544 11.276 1.00 0.00 C ATOM 558 OG SER 71 26.677 25.116 10.881 1.00 0.00 O ATOM 559 N GLY 72 26.310 22.724 9.147 1.00 0.00 N ATOM 560 CA GLY 72 26.663 22.001 7.895 1.00 0.00 C ATOM 561 C GLY 72 27.154 22.991 6.821 1.00 0.00 C ATOM 562 O GLY 72 26.325 23.643 6.182 1.00 0.00 O ATOM 563 N PHE 73 28.478 23.133 6.641 1.00 0.00 N ATOM 564 CA PHE 73 29.044 24.136 5.688 1.00 0.00 C ATOM 565 C PHE 73 29.419 23.595 4.279 1.00 0.00 C ATOM 566 O PHE 73 29.867 22.455 4.144 1.00 0.00 O ATOM 567 CB PHE 73 30.242 24.874 6.350 1.00 0.00 C ATOM 568 CG PHE 73 31.661 24.258 6.344 1.00 0.00 C ATOM 569 CD1 PHE 73 32.556 24.587 5.315 1.00 0.00 C ATOM 570 CD2 PHE 73 32.100 23.448 7.393 1.00 0.00 C ATOM 571 CE1 PHE 73 33.863 24.108 5.337 1.00 0.00 C ATOM 572 CE2 PHE 73 33.417 22.991 7.426 1.00 0.00 C ATOM 573 CZ PHE 73 34.294 23.321 6.400 1.00 0.00 C ATOM 574 N ALA 74 29.309 24.452 3.256 1.00 0.00 N ATOM 575 CA ALA 74 29.723 24.114 1.877 1.00 0.00 C ATOM 576 C ALA 74 31.130 24.681 1.491 1.00 0.00 C ATOM 577 O ALA 74 31.647 25.639 2.074 1.00 0.00 O ATOM 578 CB ALA 74 28.611 24.636 0.955 1.00 0.00 C ATOM 579 N TYR 75 31.741 24.082 0.469 1.00 0.00 N ATOM 580 CA TYR 75 33.064 24.507 -0.070 1.00 0.00 C ATOM 581 C TYR 75 33.069 24.433 -1.632 1.00 0.00 C ATOM 582 O TYR 75 32.416 23.569 -2.230 1.00 0.00 O ATOM 583 CB TYR 75 34.243 23.771 0.638 1.00 0.00 C ATOM 584 CG TYR 75 34.181 22.236 0.718 1.00 0.00 C ATOM 585 CD1 TYR 75 34.587 21.448 -0.364 1.00 0.00 C ATOM 586 CD2 TYR 75 33.666 21.619 1.866 1.00 0.00 C ATOM 587 CE1 TYR 75 34.466 20.062 -0.300 1.00 0.00 C ATOM 588 CE2 TYR 75 33.546 20.233 1.921 1.00 0.00 C ATOM 589 CZ TYR 75 33.938 19.458 0.836 1.00 0.00 C ATOM 590 OH TYR 75 33.836 18.097 0.895 1.00 0.00 H ATOM 591 N GLU 76 33.734 25.389 -2.302 1.00 0.00 N ATOM 592 CA GLU 76 33.812 25.435 -3.793 1.00 0.00 C ATOM 593 C GLU 76 35.297 25.494 -4.281 1.00 0.00 C ATOM 594 O GLU 76 35.999 26.499 -4.118 1.00 0.00 O ATOM 595 CB GLU 76 32.994 26.645 -4.311 1.00 0.00 C ATOM 596 CG GLU 76 32.703 26.630 -5.841 1.00 0.00 C ATOM 597 CD GLU 76 32.645 27.996 -6.481 1.00 0.00 C ATOM 598 OE1 GLU 76 31.621 28.694 -6.385 1.00 0.00 O ATOM 599 OE2 GLU 76 33.659 28.423 -7.058 1.00 0.00 O ATOM 600 N TYR 77 35.754 24.416 -4.916 1.00 0.00 N ATOM 601 CA TYR 77 37.125 24.321 -5.492 1.00 0.00 C ATOM 602 C TYR 77 37.273 25.234 -6.767 1.00 0.00 C ATOM 603 O TYR 77 36.296 25.452 -7.495 1.00 0.00 O ATOM 604 CB TYR 77 37.389 22.831 -5.871 1.00 0.00 C ATOM 605 CG TYR 77 37.210 21.720 -4.807 1.00 0.00 C ATOM 606 CD1 TYR 77 35.945 21.150 -4.620 1.00 0.00 C ATOM 607 CD2 TYR 77 38.298 21.189 -4.116 1.00 0.00 C ATOM 608 CE1 TYR 77 35.786 20.026 -3.816 1.00 0.00 C ATOM 609 CE2 TYR 77 38.139 20.075 -3.287 1.00 0.00 C ATOM 610 CZ TYR 77 36.883 19.484 -3.163 1.00 0.00 C ATOM 611 OH TYR 77 36.722 18.347 -2.425 1.00 0.00 H ATOM 612 N THR 78 38.476 25.747 -7.092 1.00 0.00 N ATOM 613 CA THR 78 38.678 26.579 -8.334 1.00 0.00 C ATOM 614 C THR 78 38.323 25.846 -9.683 1.00 0.00 C ATOM 615 O THR 78 37.792 26.474 -10.605 1.00 0.00 O ATOM 616 CB THR 78 40.088 27.239 -8.360 1.00 0.00 C ATOM 617 OG1 THR 78 40.295 28.031 -7.196 1.00 0.00 O ATOM 618 CG2 THR 78 40.318 28.218 -9.524 1.00 0.00 C ATOM 619 N LEU 79 38.583 24.531 -9.793 1.00 0.00 N ATOM 620 CA LEU 79 38.145 23.689 -10.949 1.00 0.00 C ATOM 621 C LEU 79 36.612 23.266 -10.933 1.00 0.00 C ATOM 622 O LEU 79 36.258 22.098 -11.139 1.00 0.00 O ATOM 623 CB LEU 79 39.189 22.532 -11.125 1.00 0.00 C ATOM 624 CG LEU 79 39.736 21.739 -9.900 1.00 0.00 C ATOM 625 CD1 LEU 79 38.644 20.987 -9.142 1.00 0.00 C ATOM 626 CD2 LEU 79 40.826 20.747 -10.327 1.00 0.00 C ATOM 627 N GLU 80 35.720 24.254 -10.712 1.00 0.00 N ATOM 628 CA GLU 80 34.226 24.142 -10.693 1.00 0.00 C ATOM 629 C GLU 80 33.461 23.227 -9.665 1.00 0.00 C ATOM 630 O GLU 80 32.264 23.452 -9.450 1.00 0.00 O ATOM 631 CB GLU 80 33.645 24.047 -12.139 1.00 0.00 C ATOM 632 CG GLU 80 33.650 25.360 -12.978 1.00 0.00 C ATOM 633 CD GLU 80 34.931 25.702 -13.700 1.00 0.00 C ATOM 634 OE1 GLU 80 35.345 24.907 -14.565 1.00 0.00 O ATOM 635 OE2 GLU 80 35.519 26.779 -13.478 1.00 0.00 O ATOM 636 N ILE 81 34.069 22.213 -9.031 1.00 0.00 N ATOM 637 CA ILE 81 33.349 21.282 -8.098 1.00 0.00 C ATOM 638 C ILE 81 32.844 21.968 -6.772 1.00 0.00 C ATOM 639 O ILE 81 33.405 22.950 -6.276 1.00 0.00 O ATOM 640 CB ILE 81 34.145 19.963 -7.718 1.00 0.00 C ATOM 641 CG1 ILE 81 35.385 19.535 -8.550 1.00 0.00 C ATOM 642 CG2 ILE 81 33.203 18.733 -7.609 1.00 0.00 C ATOM 643 CD1 ILE 81 36.473 18.879 -7.678 1.00 0.00 C ATOM 644 N ASN 82 31.787 21.392 -6.188 1.00 0.00 N ATOM 645 CA ASN 82 31.257 21.794 -4.856 1.00 0.00 C ATOM 646 C ASN 82 31.451 20.628 -3.811 1.00 0.00 C ATOM 647 O ASN 82 32.097 19.606 -4.061 1.00 0.00 O ATOM 648 CB ASN 82 29.790 22.279 -5.078 1.00 0.00 C ATOM 649 CG ASN 82 29.660 23.704 -5.610 1.00 0.00 C ATOM 650 OD1 ASN 82 29.491 24.654 -4.853 1.00 0.00 O ATOM 651 ND2 ASN 82 29.745 23.907 -6.897 1.00 0.00 N ATOM 652 N GLY 83 30.918 20.805 -2.602 1.00 0.00 N ATOM 653 CA GLY 83 30.998 19.789 -1.514 1.00 0.00 C ATOM 654 C GLY 83 30.510 20.333 -0.156 1.00 0.00 C ATOM 655 O GLY 83 30.247 21.533 -0.027 1.00 0.00 O ATOM 656 N LYS 84 30.322 19.471 0.855 1.00 0.00 N ATOM 657 CA LYS 84 29.864 19.914 2.206 1.00 0.00 C ATOM 658 C LYS 84 30.285 19.000 3.405 1.00 0.00 C ATOM 659 O LYS 84 30.212 17.768 3.348 1.00 0.00 O ATOM 660 CB LYS 84 28.334 20.212 2.218 1.00 0.00 C ATOM 661 CG LYS 84 27.379 19.002 2.069 1.00 0.00 C ATOM 662 CD LYS 84 25.880 19.374 2.096 1.00 0.00 C ATOM 663 CE LYS 84 25.291 19.899 0.773 1.00 0.00 C ATOM 664 NZ LYS 84 25.569 21.343 0.553 1.00 0.00 N ATOM 665 N SER 85 30.654 19.646 4.520 1.00 0.00 N ATOM 666 CA SER 85 31.020 18.965 5.788 1.00 0.00 C ATOM 667 C SER 85 29.844 19.079 6.809 1.00 0.00 C ATOM 668 O SER 85 29.541 20.162 7.334 1.00 0.00 O ATOM 669 CB SER 85 32.285 19.638 6.356 1.00 0.00 C ATOM 670 OG SER 85 33.421 19.505 5.501 1.00 0.00 O ATOM 671 N LEU 86 29.185 17.952 7.102 1.00 0.00 N ATOM 672 CA LEU 86 28.026 17.898 8.034 1.00 0.00 C ATOM 673 C LEU 86 28.516 17.559 9.482 1.00 0.00 C ATOM 674 O LEU 86 28.784 16.414 9.847 1.00 0.00 O ATOM 675 CB LEU 86 26.955 16.937 7.447 1.00 0.00 C ATOM 676 CG LEU 86 26.369 17.291 6.048 1.00 0.00 C ATOM 677 CD1 LEU 86 25.333 16.242 5.637 1.00 0.00 C ATOM 678 CD2 LEU 86 25.707 18.679 5.993 1.00 0.00 C ATOM 679 N LYS 87 28.637 18.610 10.297 1.00 0.00 N ATOM 680 CA LYS 87 29.197 18.569 11.681 1.00 0.00 C ATOM 681 C LYS 87 28.105 18.556 12.801 1.00 0.00 C ATOM 682 O LYS 87 27.226 19.427 12.830 1.00 0.00 O ATOM 683 CB LYS 87 30.171 19.775 11.743 1.00 0.00 C ATOM 684 CG LYS 87 29.535 21.182 11.593 1.00 0.00 C ATOM 685 CD LYS 87 30.401 22.222 10.868 1.00 0.00 C ATOM 686 CE LYS 87 29.550 23.431 10.427 1.00 0.00 C ATOM 687 NZ LYS 87 30.332 24.687 10.584 1.00 0.00 N ATOM 688 N LYS 88 28.162 17.580 13.728 1.00 0.00 N ATOM 689 CA LYS 88 27.051 17.332 14.707 1.00 0.00 C ATOM 690 C LYS 88 27.407 16.583 16.042 1.00 0.00 C ATOM 691 O LYS 88 28.517 16.080 16.241 1.00 0.00 O ATOM 692 CB LYS 88 25.929 16.602 13.903 1.00 0.00 C ATOM 693 CG LYS 88 26.286 15.218 13.294 1.00 0.00 C ATOM 694 CD LYS 88 25.351 14.781 12.156 1.00 0.00 C ATOM 695 CE LYS 88 25.507 15.609 10.866 1.00 0.00 C ATOM 696 NZ LYS 88 24.655 14.961 9.833 1.00 0.00 N ATOM 697 N TYR 89 26.410 16.488 16.945 1.00 0.00 N ATOM 698 CA TYR 89 26.527 15.810 18.271 1.00 0.00 C ATOM 699 C TYR 89 26.635 14.238 18.167 1.00 0.00 C ATOM 700 O TYR 89 25.637 13.514 18.281 1.00 0.00 O ATOM 701 CB TYR 89 25.273 16.220 19.111 1.00 0.00 C ATOM 702 CG TYR 89 24.993 17.703 19.422 1.00 0.00 C ATOM 703 CD1 TYR 89 25.718 18.371 20.413 1.00 0.00 C ATOM 704 CD2 TYR 89 23.960 18.378 18.761 1.00 0.00 C ATOM 705 CE1 TYR 89 25.424 19.696 20.726 1.00 0.00 C ATOM 706 CE2 TYR 89 23.669 19.704 19.076 1.00 0.00 C ATOM 707 CZ TYR 89 24.408 20.363 20.054 1.00 0.00 C ATOM 708 OH TYR 89 24.179 21.678 20.346 1.00 0.00 H ATOM 709 N MET 90 27.848 13.701 17.953 1.00 0.00 N ATOM 710 CA MET 90 28.059 12.237 17.750 1.00 0.00 C ATOM 711 C MET 90 29.248 11.702 18.573 1.00 0.00 C ATOM 712 O MET 90 29.648 10.537 18.492 1.00 0.00 O ATOM 713 CB MET 90 28.214 11.973 16.226 1.00 0.00 C ATOM 714 CG MET 90 26.875 11.894 15.467 1.00 0.00 C ATOM 715 SD MET 90 27.174 11.771 13.696 1.00 0.00 S ATOM 716 CE MET 90 25.516 11.301 13.175 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 77.32 39.3 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 62.95 50.0 118 100.0 118 ARMSMC SURFACE . . . . . . . . 88.68 31.5 108 100.0 108 ARMSMC BURIED . . . . . . . . 55.40 51.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.22 34.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 98.55 31.8 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 98.20 32.7 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 99.75 31.8 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 90.96 38.7 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.87 47.3 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 72.25 50.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 74.42 46.2 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 80.99 45.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 70.23 50.0 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.96 54.2 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 61.96 54.2 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 54.39 58.8 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 56.44 55.6 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 76.16 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 56.95 61.5 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 56.95 61.5 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 64.87 50.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 60.24 63.6 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 33.47 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.69 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.69 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.1299 CRMSCA SECONDARY STRUCTURE . . 11.90 59 100.0 59 CRMSCA SURFACE . . . . . . . . 11.46 55 100.0 55 CRMSCA BURIED . . . . . . . . 12.06 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.78 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 11.99 293 100.0 293 CRMSMC SURFACE . . . . . . . . 11.57 269 100.0 269 CRMSMC BURIED . . . . . . . . 12.10 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 13.78 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 14.04 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 14.04 252 100.0 252 CRMSSC SURFACE . . . . . . . . 14.23 204 100.0 204 CRMSSC BURIED . . . . . . . . 13.16 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.75 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 13.00 488 100.0 488 CRMSALL SURFACE . . . . . . . . 12.81 424 100.0 424 CRMSALL BURIED . . . . . . . . 12.65 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.084 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 11.351 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 10.858 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 11.439 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.150 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 11.417 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 10.933 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 11.487 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.909 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 13.175 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 13.172 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 13.426 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 12.217 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.960 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 12.244 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 12.021 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 11.872 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 4 39 90 90 DISTCA CA (P) 0.00 0.00 1.11 4.44 43.33 90 DISTCA CA (RMS) 0.00 0.00 2.53 4.13 7.69 DISTCA ALL (N) 0 5 7 33 256 716 716 DISTALL ALL (P) 0.00 0.70 0.98 4.61 35.75 716 DISTALL ALL (RMS) 0.00 1.68 2.01 3.99 7.53 DISTALL END of the results output