####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS253_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS253_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 88 3 - 90 4.96 5.23 LCS_AVERAGE: 96.95 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 1.59 6.76 LCS_AVERAGE: 18.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 6 - 22 0.98 6.38 LCS_AVERAGE: 10.86 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 8 54 4 4 4 6 9 10 12 12 12 14 19 29 33 45 50 64 68 75 81 84 LCS_GDT T 2 T 2 4 8 55 4 4 4 6 9 10 25 29 36 43 53 60 69 70 74 81 85 86 87 88 LCS_GDT D 3 D 3 4 22 88 4 4 4 6 26 33 42 50 57 61 69 73 75 77 79 81 85 86 87 88 LCS_GDT L 4 L 4 4 22 88 4 4 9 17 30 38 48 51 59 65 69 73 75 77 79 81 85 86 87 88 LCS_GDT V 5 V 5 12 22 88 3 7 11 19 29 44 49 54 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT A 6 A 6 17 22 88 5 11 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 7 V 7 17 22 88 3 11 25 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT W 8 W 8 17 22 88 4 17 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT D 9 D 9 17 22 88 4 12 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 10 V 10 17 22 88 4 11 21 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT A 11 A 11 17 22 88 4 12 23 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT L 12 L 12 17 22 88 4 11 21 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT S 13 S 13 17 22 88 4 11 21 27 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT D 14 D 14 17 22 88 4 12 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT G 15 G 15 17 22 88 4 12 27 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 16 V 16 17 22 88 4 12 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT H 17 H 17 17 22 88 5 16 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 18 K 18 17 22 88 7 20 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT I 19 I 19 17 22 88 5 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 20 E 20 17 22 88 5 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT F 21 F 21 17 22 88 3 12 25 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 22 E 22 17 22 88 7 12 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT H 23 H 23 9 22 88 3 7 12 26 32 43 48 53 59 65 69 73 75 77 79 81 85 86 87 88 LCS_GDT G 24 G 24 9 22 88 7 9 21 35 43 46 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT T 25 T 25 3 21 88 3 4 4 12 15 27 42 48 53 62 67 72 75 77 79 81 85 86 87 88 LCS_GDT T 26 T 26 3 18 88 3 3 4 4 5 7 13 49 55 57 63 69 75 77 79 81 85 86 87 88 LCS_GDT S 27 S 27 3 18 88 3 11 19 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT G 28 G 28 14 18 88 5 20 28 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 29 K 29 14 18 88 4 9 22 32 41 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT R 30 R 30 14 18 88 6 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 31 V 31 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 32 V 32 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT Y 33 Y 33 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 34 V 34 14 18 88 9 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT D 35 D 35 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT G 36 G 36 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 37 K 37 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 38 E 38 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 39 E 39 14 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT I 40 I 40 14 18 88 8 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT R 41 R 41 14 18 88 4 16 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 42 K 42 13 18 88 4 6 18 33 42 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 43 E 43 3 18 88 5 12 16 27 35 44 49 54 60 63 70 72 75 77 79 81 85 86 87 88 LCS_GDT W 44 W 44 3 5 88 3 3 4 6 8 12 12 15 28 44 52 57 67 74 77 81 85 86 87 88 LCS_GDT M 45 M 45 4 5 88 3 4 4 7 8 12 17 24 32 36 48 56 61 68 74 79 84 86 87 88 LCS_GDT F 46 F 46 4 5 88 3 4 4 4 7 8 9 20 28 36 42 51 57 63 70 75 79 85 87 88 LCS_GDT K 47 K 47 4 5 88 3 4 4 4 8 17 33 42 51 54 62 69 71 76 79 81 85 86 87 88 LCS_GDT L 48 L 48 4 5 88 3 4 4 4 6 6 8 10 12 26 42 50 58 68 72 78 83 86 87 88 LCS_GDT V 49 V 49 4 5 88 3 4 4 11 13 15 23 33 43 51 55 59 70 74 79 81 85 86 87 88 LCS_GDT G 50 G 50 4 5 88 3 4 4 5 16 22 35 53 58 63 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 51 K 51 3 9 88 3 3 3 5 10 20 36 51 58 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 52 E 52 5 16 88 3 6 9 11 13 22 28 46 53 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT T 53 T 53 5 16 88 3 5 9 11 25 29 37 53 58 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT F 54 F 54 5 16 88 3 5 7 14 25 29 37 51 58 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT Y 55 Y 55 5 16 88 3 5 9 11 25 29 37 46 54 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT V 56 V 56 5 16 88 3 6 9 11 25 29 37 46 57 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT G 57 G 57 4 16 88 3 5 7 9 15 19 23 32 42 52 56 62 69 72 78 79 81 86 87 88 LCS_GDT A 58 A 58 3 16 88 3 6 9 14 25 29 37 46 53 60 69 72 74 77 78 81 85 86 87 88 LCS_GDT A 59 A 59 3 16 88 3 5 9 14 25 30 43 53 58 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 60 K 60 4 16 88 3 8 11 14 22 28 43 54 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT T 61 T 61 4 16 88 3 6 8 11 20 29 42 53 59 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 62 K 62 7 16 88 4 5 12 19 30 41 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT A 63 A 63 7 16 88 4 6 9 14 25 39 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT T 64 T 64 7 16 88 4 6 9 14 25 39 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT I 65 I 65 7 16 88 4 6 9 11 17 30 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT N 66 N 66 7 16 88 4 6 9 11 17 33 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT I 67 I 67 7 16 88 3 6 8 13 29 41 49 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT D 68 D 68 7 14 88 3 6 8 11 20 29 44 54 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT A 69 A 69 4 10 88 3 4 5 7 16 25 35 53 57 61 68 72 75 77 79 81 85 86 87 88 LCS_GDT I 70 I 70 4 10 88 3 4 5 7 10 14 21 28 33 43 48 56 68 73 78 81 85 86 87 88 LCS_GDT S 71 S 71 3 7 88 3 3 4 7 9 17 22 29 35 43 50 58 68 74 78 81 85 86 87 88 LCS_GDT G 72 G 72 3 14 88 3 3 5 7 10 10 11 17 29 44 51 65 71 74 79 81 85 86 87 88 LCS_GDT F 73 F 73 13 18 88 6 12 26 33 41 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT A 74 A 74 13 18 88 3 15 27 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT Y 75 Y 75 13 18 88 7 20 28 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 76 E 76 13 18 88 7 20 28 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT Y 77 Y 77 13 18 88 10 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT T 78 T 78 13 18 88 10 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT L 79 L 79 13 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT E 80 E 80 13 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT I 81 I 81 13 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT N 82 N 82 13 18 88 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT G 83 G 83 13 18 88 7 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 84 K 84 13 18 88 8 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT S 85 S 85 13 18 88 7 9 27 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT L 86 L 86 4 18 88 3 4 18 35 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 87 K 87 4 18 88 3 4 6 23 42 47 50 53 59 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT K 88 K 88 4 18 88 3 13 20 34 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 LCS_GDT Y 89 Y 89 4 18 88 3 4 4 7 15 38 46 53 55 63 69 73 75 77 79 81 85 86 87 88 LCS_GDT M 90 M 90 3 18 88 3 3 4 6 31 47 50 53 60 65 70 73 75 77 79 81 85 86 87 88 LCS_AVERAGE LCS_A: 42.21 ( 10.86 18.81 96.95 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 21 28 36 43 48 50 55 60 65 70 73 75 77 79 81 85 86 87 88 GDT PERCENT_AT 13.33 23.33 31.11 40.00 47.78 53.33 55.56 61.11 66.67 72.22 77.78 81.11 83.33 85.56 87.78 90.00 94.44 95.56 96.67 97.78 GDT RMS_LOCAL 0.35 0.69 0.90 1.28 1.52 1.72 1.83 2.34 2.65 2.92 3.31 3.41 3.51 3.64 4.01 4.23 4.62 4.78 4.89 4.96 GDT RMS_ALL_AT 5.50 5.42 5.37 5.63 5.46 5.44 5.47 5.40 5.36 5.44 5.44 5.53 5.48 5.51 5.27 5.25 5.23 5.22 5.23 5.22 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: D 35 D 35 # possible swapping detected: E 38 E 38 # possible swapping detected: E 43 E 43 # possible swapping detected: Y 55 Y 55 # possible swapping detected: E 76 E 76 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 13.026 0 0.081 1.129 15.074 1.190 0.595 LGA T 2 T 2 9.037 0 0.214 1.186 12.630 11.548 6.667 LGA D 3 D 3 6.402 0 0.115 1.031 11.895 13.571 7.143 LGA L 4 L 4 4.899 0 0.208 1.440 9.534 49.524 30.417 LGA V 5 V 5 4.242 0 0.665 0.571 8.812 35.952 24.286 LGA A 6 A 6 2.192 0 0.130 0.170 2.422 66.786 66.381 LGA V 7 V 7 2.318 0 0.081 0.099 3.089 70.952 64.014 LGA W 8 W 8 1.080 0 0.230 1.228 7.699 83.810 52.687 LGA D 9 D 9 1.347 0 0.098 0.983 5.161 79.286 62.083 LGA V 10 V 10 1.739 0 0.204 1.100 3.874 70.833 68.707 LGA A 11 A 11 1.651 0 0.366 0.365 2.175 70.833 71.238 LGA L 12 L 12 2.030 0 0.049 1.012 3.884 64.762 64.107 LGA S 13 S 13 2.849 0 0.628 0.622 5.255 47.619 50.794 LGA D 14 D 14 1.872 0 0.493 1.220 5.346 75.000 63.274 LGA G 15 G 15 2.383 0 0.094 0.094 2.669 69.048 69.048 LGA V 16 V 16 1.525 0 0.209 1.159 2.918 75.000 73.061 LGA H 17 H 17 0.835 0 0.083 1.118 2.470 88.214 80.095 LGA K 18 K 18 0.611 0 0.048 0.807 5.082 92.857 70.952 LGA I 19 I 19 0.497 0 0.089 0.210 1.139 95.238 91.726 LGA E 20 E 20 0.753 0 0.142 0.990 3.316 85.952 74.656 LGA F 21 F 21 2.133 0 0.296 1.104 7.585 68.810 44.199 LGA E 22 E 22 2.424 0 0.060 0.665 3.596 55.714 62.751 LGA H 23 H 23 4.925 0 0.063 1.367 11.087 37.262 18.381 LGA G 24 G 24 3.685 0 0.616 0.616 4.260 43.452 43.452 LGA T 25 T 25 6.171 0 0.136 0.128 9.025 19.643 12.517 LGA T 26 T 26 6.285 0 0.377 0.420 8.413 21.667 15.170 LGA S 27 S 27 2.784 0 0.372 0.365 3.529 53.810 58.810 LGA G 28 G 28 2.460 0 0.486 0.486 2.460 68.810 68.810 LGA K 29 K 29 3.410 0 0.103 1.267 13.063 61.429 32.275 LGA R 30 R 30 1.064 0 0.370 1.049 8.782 81.548 50.346 LGA V 31 V 31 1.408 0 0.038 0.187 1.548 79.286 78.980 LGA V 32 V 32 1.298 0 0.033 0.070 1.358 81.429 81.429 LGA Y 33 Y 33 1.261 0 0.022 0.198 2.163 81.429 77.897 LGA V 34 V 34 1.201 0 0.059 0.099 1.538 81.429 80.204 LGA D 35 D 35 1.030 0 0.019 0.130 1.530 81.429 81.488 LGA G 36 G 36 1.035 0 0.123 0.123 1.140 81.429 81.429 LGA K 37 K 37 1.215 0 0.025 1.040 6.514 81.429 60.212 LGA E 38 E 38 1.094 0 0.071 0.643 2.068 85.952 80.635 LGA E 39 E 39 1.116 0 0.019 1.168 5.307 81.429 67.460 LGA I 40 I 40 1.160 0 0.138 0.147 3.101 83.690 73.393 LGA R 41 R 41 1.554 0 0.413 1.365 4.140 72.976 60.563 LGA K 42 K 42 2.958 0 0.324 1.134 11.353 53.690 28.677 LGA E 43 E 43 5.399 0 0.254 0.938 11.378 21.667 11.852 LGA W 44 W 44 9.730 0 0.396 1.277 18.352 2.738 0.782 LGA M 45 M 45 10.705 0 0.602 1.305 11.977 0.000 0.060 LGA F 46 F 46 11.073 0 0.069 0.263 18.581 0.119 0.043 LGA K 47 K 47 8.569 0 0.510 1.019 9.423 3.929 3.651 LGA L 48 L 48 12.399 0 0.133 0.344 19.143 0.000 0.000 LGA V 49 V 49 9.814 0 0.041 0.092 12.965 7.976 4.762 LGA G 50 G 50 5.899 0 0.547 0.547 7.103 17.500 17.500 LGA K 51 K 51 5.586 0 0.228 0.834 15.768 20.595 10.265 LGA E 52 E 52 7.333 0 0.672 1.192 11.848 14.524 6.508 LGA T 53 T 53 6.488 0 0.019 0.431 6.965 14.286 14.966 LGA F 54 F 54 6.759 0 0.239 0.358 6.759 14.286 15.411 LGA Y 55 Y 55 7.546 0 0.133 0.278 8.721 9.286 5.635 LGA V 56 V 56 6.890 0 0.582 0.536 8.302 8.810 14.898 LGA G 57 G 57 10.435 0 0.124 0.124 10.435 4.405 4.405 LGA A 58 A 58 8.852 0 0.124 0.128 10.024 6.786 5.714 LGA A 59 A 59 7.392 0 0.588 0.548 8.337 19.881 17.905 LGA K 60 K 60 6.016 0 0.480 0.819 9.793 19.524 15.291 LGA T 61 T 61 5.937 0 0.360 1.118 8.599 22.738 21.156 LGA K 62 K 62 4.360 0 0.398 0.910 4.967 32.857 51.799 LGA A 63 A 63 4.734 0 0.060 0.057 4.780 31.429 31.429 LGA T 64 T 64 4.724 0 0.049 0.055 5.035 31.429 30.680 LGA I 65 I 65 4.657 0 0.134 0.227 5.191 31.429 30.119 LGA N 66 N 66 4.527 0 0.366 1.063 8.859 30.119 23.155 LGA I 67 I 67 3.872 0 0.094 0.156 4.249 40.238 47.024 LGA D 68 D 68 5.296 0 0.087 0.937 10.277 21.190 12.976 LGA A 69 A 69 7.475 0 0.243 0.345 9.125 7.500 8.000 LGA I 70 I 70 12.526 0 0.654 1.414 14.846 0.000 0.000 LGA S 71 S 71 12.669 0 0.603 1.005 14.215 0.000 0.000 LGA G 72 G 72 10.868 0 0.222 0.222 11.178 2.976 2.976 LGA F 73 F 73 3.301 0 0.432 1.317 6.034 53.333 49.351 LGA A 74 A 74 2.959 0 0.176 0.221 4.473 53.571 50.286 LGA Y 75 Y 75 1.952 0 0.227 0.497 3.205 68.810 65.635 LGA E 76 E 76 1.250 0 0.077 0.443 2.402 83.810 75.979 LGA Y 77 Y 77 0.807 0 0.153 0.343 5.335 88.214 62.500 LGA T 78 T 78 0.372 0 0.085 0.561 1.557 95.238 90.748 LGA L 79 L 79 0.767 0 0.038 0.176 1.385 90.476 90.536 LGA E 80 E 80 1.401 0 0.022 0.920 3.371 77.143 71.376 LGA I 81 I 81 1.695 0 0.041 1.105 4.741 75.000 62.321 LGA N 82 N 82 1.233 0 0.047 0.125 2.386 85.952 78.452 LGA G 83 G 83 0.576 0 0.084 0.084 0.950 90.476 90.476 LGA K 84 K 84 1.296 0 0.123 1.196 4.890 81.548 65.926 LGA S 85 S 85 1.867 0 0.167 0.245 3.515 68.810 62.619 LGA L 86 L 86 3.454 0 0.567 1.446 8.351 46.071 32.857 LGA K 87 K 87 4.037 0 0.153 0.695 12.679 40.476 21.058 LGA K 88 K 88 2.944 0 0.055 1.238 9.996 48.929 33.651 LGA Y 89 Y 89 4.903 0 0.227 1.356 14.957 31.548 11.587 LGA M 90 M 90 4.230 0 0.513 1.051 6.341 27.143 31.190 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 5.213 5.057 6.291 48.339 42.295 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 55 2.34 53.611 47.594 2.258 LGA_LOCAL RMSD: 2.336 Number of atoms: 55 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.399 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 5.213 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.044506 * X + -0.977846 * Y + 0.204542 * Z + 25.371130 Y_new = 0.886315 * X + -0.055820 * Y + -0.459707 * Z + 10.441071 Z_new = 0.460940 * X + 0.201748 * Y + 0.864195 * Z + 4.609078 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.520624 -0.479054 0.229344 [DEG: 87.1253 -27.4478 13.1405 ] ZXZ: 0.418638 0.527249 1.158228 [DEG: 23.9862 30.2091 66.3616 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS253_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS253_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 55 2.34 47.594 5.21 REMARK ---------------------------------------------------------- MOLECULE T0540TS253_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2kd2_A 2p4b_A 1sq4_A 1v8h_A 2p4b_A ATOM 1 N MET 1 25.861 12.281 3.673 1.00 0.50 N ATOM 2 CA MET 1 26.375 10.943 3.940 1.00 0.50 C ATOM 3 C MET 1 27.462 10.974 5.007 1.00 0.50 C ATOM 4 O MET 1 28.653 10.950 4.696 1.00 0.50 O ATOM 5 CB MET 1 26.925 10.312 2.657 1.00 0.50 C ATOM 6 CG MET 1 27.392 8.875 2.838 1.00 0.50 C ATOM 7 SD MET 1 26.034 7.765 3.281 1.00 0.50 S ATOM 8 CE MET 1 25.164 7.669 1.721 1.00 0.50 C ATOM 20 N THR 2 27.045 11.030 6.269 1.00 0.50 N ATOM 21 CA THR 2 27.982 11.108 7.382 1.00 0.50 C ATOM 22 C THR 2 28.439 9.721 7.817 1.00 0.50 C ATOM 23 O THR 2 28.972 9.548 8.914 1.00 0.50 O ATOM 24 CB THR 2 27.352 11.839 8.589 1.00 0.50 C ATOM 25 OG1 THR 2 28.208 11.674 9.727 1.00 0.50 O ATOM 26 CG2 THR 2 25.974 11.278 8.913 1.00 0.50 C ATOM 34 N ASP 3 28.223 8.735 6.953 1.00 0.50 N ATOM 35 CA ASP 3 28.826 7.419 7.127 1.00 0.50 C ATOM 36 C ASP 3 29.862 7.139 6.045 1.00 0.50 C ATOM 37 O ASP 3 30.406 6.038 5.963 1.00 0.50 O ATOM 38 CB ASP 3 27.748 6.331 7.114 1.00 0.50 C ATOM 39 CG ASP 3 26.791 6.456 5.943 1.00 0.50 C ATOM 40 OD1 ASP 3 25.937 7.369 5.943 1.00 0.50 O ATOM 41 OD2 ASP 3 26.893 5.627 5.011 1.00 0.50 O ATOM 46 N LEU 4 30.128 8.142 5.215 1.00 0.50 N ATOM 47 CA LEU 4 30.979 7.963 4.045 1.00 0.50 C ATOM 48 C LEU 4 31.877 9.173 3.826 1.00 0.50 C ATOM 49 O LEU 4 31.821 10.145 4.580 1.00 0.50 O ATOM 50 CB LEU 4 30.121 7.723 2.797 1.00 0.50 C ATOM 51 CG LEU 4 29.246 6.468 2.809 1.00 0.50 C ATOM 52 CD1 LEU 4 28.228 6.528 1.676 1.00 0.50 C ATOM 53 CD2 LEU 4 30.113 5.222 2.679 1.00 0.50 C ATOM 65 N VAL 5 32.707 9.107 2.790 1.00 0.50 N ATOM 66 CA VAL 5 33.581 10.220 2.438 1.00 0.50 C ATOM 67 C VAL 5 33.106 10.913 1.167 1.00 0.50 C ATOM 68 O VAL 5 32.688 10.260 0.212 1.00 0.50 O ATOM 69 CB VAL 5 35.041 9.749 2.251 1.00 0.50 C ATOM 70 CG1 VAL 5 35.620 9.244 3.568 1.00 0.50 C ATOM 71 CG2 VAL 5 35.115 8.657 1.189 1.00 0.50 C ATOM 81 N ALA 6 33.171 12.240 1.163 1.00 0.50 N ATOM 82 CA ALA 6 32.757 13.024 0.006 1.00 0.50 C ATOM 83 C ALA 6 33.899 13.182 -0.990 1.00 0.50 C ATOM 84 O ALA 6 34.886 13.865 -0.714 1.00 0.50 O ATOM 85 CB ALA 6 32.258 14.396 0.450 1.00 0.50 C ATOM 91 N VAL 7 33.760 12.546 -2.148 1.00 0.50 N ATOM 92 CA VAL 7 34.780 12.614 -3.187 1.00 0.50 C ATOM 93 C VAL 7 34.706 13.933 -3.945 1.00 0.50 C ATOM 94 O VAL 7 33.640 14.332 -4.414 1.00 0.50 O ATOM 95 CB VAL 7 34.645 11.442 -4.185 1.00 0.50 C ATOM 96 CG1 VAL 7 35.593 11.623 -5.365 1.00 0.50 C ATOM 97 CG2 VAL 7 34.921 10.115 -3.485 1.00 0.50 C ATOM 107 N TRP 8 35.845 14.608 -4.060 1.00 0.50 N ATOM 108 CA TRP 8 35.910 15.885 -4.761 1.00 0.50 C ATOM 109 C TRP 8 37.303 16.130 -5.330 1.00 0.50 C ATOM 110 O TRP 8 38.143 16.760 -4.689 1.00 0.50 O ATOM 111 CB TRP 8 35.521 17.034 -3.821 1.00 0.50 C ATOM 112 CG TRP 8 35.473 18.377 -4.488 1.00 0.50 C ATOM 113 CD1 TRP 8 36.384 19.389 -4.364 1.00 0.50 C ATOM 114 CD2 TRP 8 34.460 18.851 -5.383 1.00 0.50 C ATOM 115 NE1 TRP 8 35.997 20.465 -5.126 1.00 0.50 N ATOM 116 CE2 TRP 8 34.823 20.161 -5.761 1.00 0.50 C ATOM 117 CE3 TRP 8 33.284 18.293 -5.899 1.00 0.50 C ATOM 118 CZ2 TRP 8 34.046 20.926 -6.636 1.00 0.50 C ATOM 119 CZ3 TRP 8 32.513 19.055 -6.768 1.00 0.50 C ATOM 120 CH2 TRP 8 32.897 20.357 -7.128 1.00 0.50 H ATOM 131 N ASP 9 37.540 15.627 -6.537 1.00 0.50 N ATOM 132 CA ASP 9 38.830 15.790 -7.195 1.00 0.50 C ATOM 133 C ASP 9 38.920 17.133 -7.907 1.00 0.50 C ATOM 134 O ASP 9 38.230 17.369 -8.899 1.00 0.50 O ATOM 135 CB ASP 9 39.069 14.652 -8.192 1.00 0.50 C ATOM 136 CG ASP 9 40.459 14.673 -8.799 1.00 0.50 C ATOM 137 OD1 ASP 9 41.148 15.712 -8.718 1.00 0.50 O ATOM 138 OD2 ASP 9 40.866 13.635 -9.368 1.00 0.50 O ATOM 143 N VAL 10 39.773 18.014 -7.394 1.00 0.50 N ATOM 144 CA VAL 10 39.954 19.336 -7.979 1.00 0.50 C ATOM 145 C VAL 10 41.150 19.362 -8.922 1.00 0.50 C ATOM 146 O VAL 10 42.273 19.053 -8.524 1.00 0.50 O ATOM 147 CB VAL 10 40.139 20.412 -6.887 1.00 0.50 C ATOM 148 CG1 VAL 10 41.208 19.989 -5.885 1.00 0.50 C ATOM 149 CG2 VAL 10 40.510 21.751 -7.517 1.00 0.50 C ATOM 159 N ALA 11 40.902 19.729 -10.175 1.00 0.50 N ATOM 160 CA ALA 11 41.959 19.796 -11.177 1.00 0.50 C ATOM 161 C ALA 11 42.634 21.161 -11.177 1.00 0.50 C ATOM 162 O ALA 11 42.686 21.839 -12.203 1.00 0.50 O ATOM 163 CB ALA 11 41.392 19.495 -12.561 1.00 0.50 C ATOM 169 N LEU 12 43.150 21.561 -10.019 1.00 0.50 N ATOM 170 CA LEU 12 43.823 22.846 -9.883 1.00 0.50 C ATOM 171 C LEU 12 45.151 22.855 -10.629 1.00 0.50 C ATOM 172 O LEU 12 45.510 21.878 -11.287 1.00 0.50 O ATOM 173 CB LEU 12 44.058 23.168 -8.404 1.00 0.50 C ATOM 174 CG LEU 12 43.981 24.646 -8.011 1.00 0.50 C ATOM 175 CD1 LEU 12 43.254 24.799 -6.682 1.00 0.50 C ATOM 176 CD2 LEU 12 45.381 25.238 -7.923 1.00 0.50 C ATOM 188 N SER 13 45.877 23.962 -10.522 1.00 0.50 N ATOM 189 CA SER 13 47.168 24.100 -11.186 1.00 0.50 C ATOM 190 C SER 13 48.089 22.934 -10.848 1.00 0.50 C ATOM 191 O SER 13 47.960 22.315 -9.791 1.00 0.50 O ATOM 192 CB SER 13 47.834 25.419 -10.788 1.00 0.50 C ATOM 193 OG SER 13 48.183 25.405 -9.414 1.00 0.50 O ATOM 199 N ASP 14 49.017 22.638 -11.750 1.00 0.50 N ATOM 200 CA ASP 14 49.961 21.546 -11.549 1.00 0.50 C ATOM 201 C ASP 14 49.427 20.242 -12.127 1.00 0.50 C ATOM 202 O ASP 14 49.741 19.879 -13.261 1.00 0.50 O ATOM 203 CB ASP 14 50.266 21.372 -10.058 1.00 0.50 C ATOM 204 CG ASP 14 51.385 20.383 -9.790 1.00 0.50 C ATOM 205 OD1 ASP 14 52.303 20.254 -10.627 1.00 0.50 O ATOM 206 OD2 ASP 14 51.342 19.722 -8.728 1.00 0.50 O ATOM 211 N GLY 15 48.618 19.539 -11.341 1.00 0.50 N ATOM 212 CA GLY 15 48.039 18.273 -11.773 1.00 0.50 C ATOM 213 C GLY 15 46.590 18.148 -11.321 1.00 0.50 C ATOM 214 O GLY 15 45.842 19.126 -11.320 1.00 0.50 O ATOM 218 N VAL 16 46.198 16.936 -10.937 1.00 0.50 N ATOM 219 CA VAL 16 44.837 16.681 -10.481 1.00 0.50 C ATOM 220 C VAL 16 44.767 16.617 -8.961 1.00 0.50 C ATOM 221 O VAL 16 45.212 15.644 -8.350 1.00 0.50 O ATOM 222 CB VAL 16 44.284 15.366 -11.075 1.00 0.50 C ATOM 223 CG1 VAL 16 42.814 15.183 -10.709 1.00 0.50 C ATOM 224 CG2 VAL 16 44.455 15.354 -12.590 1.00 0.50 C ATOM 234 N HIS 17 44.211 17.660 -8.355 1.00 0.50 N ATOM 235 CA HIS 17 44.082 17.724 -6.904 1.00 0.50 C ATOM 236 C HIS 17 42.873 16.934 -6.421 1.00 0.50 C ATOM 237 O HIS 17 41.806 16.979 -7.033 1.00 0.50 O ATOM 238 CB HIS 17 43.966 19.183 -6.442 1.00 0.50 C ATOM 239 CG HIS 17 45.134 20.027 -6.850 1.00 0.50 C ATOM 240 ND1 HIS 17 46.205 20.272 -6.018 1.00 0.50 N ATOM 241 CD2 HIS 17 45.390 20.678 -8.014 1.00 0.50 C ATOM 242 CE1 HIS 17 47.074 21.043 -6.656 1.00 0.50 C ATOM 243 NE2 HIS 17 46.603 21.303 -7.866 1.00 0.50 N ATOM 251 N LYS 18 43.047 16.207 -5.323 1.00 0.50 N ATOM 252 CA LYS 18 41.969 15.404 -4.756 1.00 0.50 C ATOM 253 C LYS 18 41.614 15.872 -3.352 1.00 0.50 C ATOM 254 O LYS 18 42.462 15.892 -2.460 1.00 0.50 O ATOM 255 CB LYS 18 42.363 13.925 -4.726 1.00 0.50 C ATOM 256 CG LYS 18 42.571 13.317 -6.104 1.00 0.50 C ATOM 257 CD LYS 18 42.898 11.832 -6.014 1.00 0.50 C ATOM 258 CE LYS 18 43.123 11.220 -7.391 1.00 0.50 C ATOM 259 NZ LYS 18 43.354 9.750 -7.311 1.00 0.50 N ATOM 273 N ILE 19 40.354 16.251 -3.160 1.00 0.50 N ATOM 274 CA ILE 19 39.885 16.720 -1.862 1.00 0.50 C ATOM 275 C ILE 19 38.856 15.764 -1.270 1.00 0.50 C ATOM 276 O ILE 19 37.801 15.530 -1.861 1.00 0.50 O ATOM 277 CB ILE 19 39.270 18.135 -1.969 1.00 0.50 C ATOM 278 CG1 ILE 19 40.368 19.173 -2.238 1.00 0.50 C ATOM 279 CG2 ILE 19 38.495 18.485 -0.697 1.00 0.50 C ATOM 280 CD1 ILE 19 39.834 20.533 -2.658 1.00 0.50 C ATOM 292 N GLU 20 39.170 15.214 -0.103 1.00 0.50 N ATOM 293 CA GLU 20 38.274 14.282 0.570 1.00 0.50 C ATOM 294 C GLU 20 37.558 14.951 1.737 1.00 0.50 C ATOM 295 O GLU 20 38.182 15.320 2.733 1.00 0.50 O ATOM 296 CB GLU 20 39.051 13.060 1.069 1.00 0.50 C ATOM 297 CG GLU 20 38.348 11.736 0.802 1.00 0.50 C ATOM 298 CD GLU 20 38.051 11.499 -0.668 1.00 0.50 C ATOM 299 OE1 GLU 20 38.969 11.629 -1.506 1.00 0.50 O ATOM 300 OE2 GLU 20 36.878 11.190 -0.987 1.00 0.50 O ATOM 307 N PHE 21 36.245 15.109 1.607 1.00 0.50 N ATOM 308 CA PHE 21 35.441 15.736 2.650 1.00 0.50 C ATOM 309 C PHE 21 34.900 14.698 3.626 1.00 0.50 C ATOM 310 O PHE 21 33.691 14.485 3.712 1.00 0.50 O ATOM 311 CB PHE 21 34.278 16.523 2.032 1.00 0.50 C ATOM 312 CG PHE 21 34.702 17.807 1.365 1.00 0.50 C ATOM 313 CD1 PHE 21 35.064 17.824 0.024 1.00 0.50 C ATOM 314 CD2 PHE 21 34.740 18.997 2.086 1.00 0.50 C ATOM 315 CE1 PHE 21 35.458 19.008 -0.595 1.00 0.50 C ATOM 316 CE2 PHE 21 35.132 20.187 1.476 1.00 0.50 C ATOM 317 CZ PHE 21 35.492 20.189 0.135 1.00 0.50 C ATOM 327 N GLU 22 35.802 14.055 4.359 1.00 0.50 N ATOM 328 CA GLU 22 35.416 13.038 5.329 1.00 0.50 C ATOM 329 C GLU 22 34.102 13.398 6.011 1.00 0.50 C ATOM 330 O GLU 22 33.947 14.497 6.541 1.00 0.50 O ATOM 331 CB GLU 22 36.515 12.859 6.382 1.00 0.50 C ATOM 332 CG GLU 22 37.095 11.451 6.430 1.00 0.50 C ATOM 333 CD GLU 22 38.607 11.420 6.302 1.00 0.50 C ATOM 334 OE1 GLU 22 39.166 12.170 5.472 1.00 0.50 O ATOM 335 OE2 GLU 22 39.242 10.625 7.036 1.00 0.50 O ATOM 342 N HIS 23 33.156 12.464 5.990 1.00 0.50 N ATOM 343 CA HIS 23 31.853 12.681 6.606 1.00 0.50 C ATOM 344 C HIS 23 31.761 11.990 7.960 1.00 0.50 C ATOM 345 O HIS 23 31.882 10.768 8.055 1.00 0.50 O ATOM 346 CB HIS 23 30.735 12.168 5.686 1.00 0.50 C ATOM 347 CG HIS 23 30.604 12.959 4.421 1.00 0.50 C ATOM 348 ND1 HIS 23 29.721 12.622 3.418 1.00 0.50 N ATOM 349 CD2 HIS 23 31.250 14.079 4.008 1.00 0.50 C ATOM 350 CE1 HIS 23 29.832 13.505 2.436 1.00 0.50 C ATOM 351 NE2 HIS 23 30.751 14.398 2.769 1.00 0.50 N ATOM 359 N GLY 24 31.549 12.779 9.009 1.00 0.50 N ATOM 360 CA GLY 24 31.441 12.244 10.360 1.00 0.50 C ATOM 361 C GLY 24 32.568 12.756 11.247 1.00 0.50 C ATOM 362 O GLY 24 32.423 12.842 12.467 1.00 0.50 O ATOM 366 N THR 25 33.695 13.094 10.628 1.00 0.50 N ATOM 367 CA THR 25 34.850 13.599 11.360 1.00 0.50 C ATOM 368 C THR 25 34.546 14.944 12.009 1.00 0.50 C ATOM 369 O THR 25 35.451 15.638 12.474 1.00 0.50 O ATOM 370 CB THR 25 36.075 13.749 10.432 1.00 0.50 C ATOM 371 OG1 THR 25 35.667 14.410 9.228 1.00 0.50 O ATOM 372 CG2 THR 25 36.667 12.390 10.080 1.00 0.50 C ATOM 380 N THR 26 33.268 15.306 12.037 1.00 0.50 N ATOM 381 CA THR 26 32.843 16.568 12.630 1.00 0.50 C ATOM 382 C THR 26 33.381 16.721 14.047 1.00 0.50 C ATOM 383 O THR 26 34.588 16.653 14.273 1.00 0.50 O ATOM 384 CB THR 26 31.302 16.679 12.656 1.00 0.50 C ATOM 385 OG1 THR 26 30.819 16.718 11.308 1.00 0.50 O ATOM 386 CG2 THR 26 30.855 17.939 13.386 1.00 0.50 C ATOM 394 N SER 27 32.476 16.930 14.999 1.00 0.50 N ATOM 395 CA SER 27 32.859 17.092 16.396 1.00 0.50 C ATOM 396 C SER 27 33.688 18.354 16.597 1.00 0.50 C ATOM 397 O SER 27 33.155 19.412 16.933 1.00 0.50 O ATOM 398 CB SER 27 33.647 15.872 16.878 1.00 0.50 C ATOM 399 OG SER 27 34.934 15.845 16.285 1.00 0.50 O ATOM 405 N GLY 28 34.995 18.236 16.391 1.00 0.50 N ATOM 406 CA GLY 28 35.901 19.367 16.549 1.00 0.50 C ATOM 407 C GLY 28 36.269 19.971 15.201 1.00 0.50 C ATOM 408 O GLY 28 35.588 20.869 14.704 1.00 0.50 O ATOM 412 N LYS 29 37.353 19.476 14.612 1.00 0.50 N ATOM 413 CA LYS 29 37.815 19.966 13.319 1.00 0.50 C ATOM 414 C LYS 29 37.620 18.918 12.232 1.00 0.50 C ATOM 415 O LYS 29 37.392 17.743 12.521 1.00 0.50 O ATOM 416 CB LYS 29 39.291 20.367 13.396 1.00 0.50 C ATOM 417 CG LYS 29 39.610 21.322 14.535 1.00 0.50 C ATOM 418 CD LYS 29 39.561 22.774 14.075 1.00 0.50 C ATOM 419 CE LYS 29 39.772 23.740 15.234 1.00 0.50 C ATOM 420 NZ LYS 29 41.183 23.722 15.717 1.00 0.50 N ATOM 434 N ARG 30 37.710 19.350 10.978 1.00 0.50 N ATOM 435 CA ARG 30 37.543 18.449 9.844 1.00 0.50 C ATOM 436 C ARG 30 38.888 17.935 9.347 1.00 0.50 C ATOM 437 O ARG 30 39.597 17.230 10.065 1.00 0.50 O ATOM 438 CB ARG 30 36.804 19.155 8.703 1.00 0.50 C ATOM 439 CG ARG 30 35.389 19.584 9.066 1.00 0.50 C ATOM 440 CD ARG 30 34.450 18.390 9.164 1.00 0.50 C ATOM 441 NE ARG 30 33.082 18.803 9.463 1.00 0.50 N ATOM 442 CZ ARG 30 32.058 17.972 9.648 1.00 0.50 C ATOM 443 NH1 ARG 30 32.254 16.660 9.756 1.00 0.50 H ATOM 444 NH2 ARG 30 30.822 18.459 9.711 1.00 0.50 H ATOM 458 N VAL 31 39.233 18.289 8.113 1.00 0.50 N ATOM 459 CA VAL 31 40.494 17.863 7.518 1.00 0.50 C ATOM 460 C VAL 31 40.457 17.989 6.000 1.00 0.50 C ATOM 461 O VAL 31 39.600 17.400 5.340 1.00 0.50 O ATOM 462 CB VAL 31 40.832 16.406 7.903 1.00 0.50 C ATOM 463 CG1 VAL 31 42.116 15.950 7.220 1.00 0.50 C ATOM 464 CG2 VAL 31 40.965 16.273 9.416 1.00 0.50 C ATOM 474 N VAL 32 41.389 18.761 5.453 1.00 0.50 N ATOM 475 CA VAL 32 41.464 18.967 4.011 1.00 0.50 C ATOM 476 C VAL 32 42.715 18.322 3.428 1.00 0.50 C ATOM 477 O VAL 32 43.828 18.577 3.887 1.00 0.50 O ATOM 478 CB VAL 32 41.450 20.470 3.658 1.00 0.50 C ATOM 479 CG1 VAL 32 41.588 20.674 2.153 1.00 0.50 C ATOM 480 CG2 VAL 32 40.166 21.122 4.161 1.00 0.50 C ATOM 490 N TYR 33 42.525 17.484 2.414 1.00 0.50 N ATOM 491 CA TYR 33 43.634 16.767 1.796 1.00 0.50 C ATOM 492 C TYR 33 43.781 17.143 0.327 1.00 0.50 C ATOM 493 O TYR 33 42.791 17.272 -0.393 1.00 0.50 O ATOM 494 CB TYR 33 43.430 15.251 1.925 1.00 0.50 C ATOM 495 CG TYR 33 43.497 14.750 3.351 1.00 0.50 C ATOM 496 CD1 TYR 33 44.724 14.521 3.972 1.00 0.50 C ATOM 497 CD2 TYR 33 42.332 14.504 4.074 1.00 0.50 C ATOM 498 CE1 TYR 33 44.789 14.057 5.282 1.00 0.50 C ATOM 499 CE2 TYR 33 42.387 14.040 5.385 1.00 0.50 C ATOM 500 CZ TYR 33 43.618 13.821 5.979 1.00 0.50 C ATOM 501 OH TYR 33 43.675 13.362 7.276 1.00 0.50 H ATOM 511 N VAL 34 45.023 17.318 -0.113 1.00 0.50 N ATOM 512 CA VAL 34 45.301 17.704 -1.491 1.00 0.50 C ATOM 513 C VAL 34 46.045 16.602 -2.233 1.00 0.50 C ATOM 514 O VAL 34 47.176 16.262 -1.885 1.00 0.50 O ATOM 515 CB VAL 34 46.125 19.010 -1.551 1.00 0.50 C ATOM 516 CG1 VAL 34 46.535 19.324 -2.987 1.00 0.50 C ATOM 517 CG2 VAL 34 45.326 20.170 -0.967 1.00 0.50 C ATOM 527 N ASP 35 45.405 16.046 -3.255 1.00 0.50 N ATOM 528 CA ASP 35 45.962 14.915 -3.986 1.00 0.50 C ATOM 529 C ASP 35 46.420 13.816 -3.035 1.00 0.50 C ATOM 530 O ASP 35 47.409 13.131 -3.293 1.00 0.50 O ATOM 531 CB ASP 35 47.134 15.372 -4.862 1.00 0.50 C ATOM 532 CG ASP 35 46.712 16.302 -5.983 1.00 0.50 C ATOM 533 OD1 ASP 35 47.586 16.903 -6.642 1.00 0.50 O ATOM 534 OD2 ASP 35 45.488 16.436 -6.204 1.00 0.50 O ATOM 539 N GLY 36 45.695 13.655 -1.933 1.00 0.50 N ATOM 540 CA GLY 36 45.968 12.580 -0.987 1.00 0.50 C ATOM 541 C GLY 36 46.762 13.087 0.210 1.00 0.50 C ATOM 542 O GLY 36 46.759 12.470 1.275 1.00 0.50 O ATOM 546 N LYS 37 47.441 14.214 0.028 1.00 0.50 N ATOM 547 CA LYS 37 48.274 14.784 1.081 1.00 0.50 C ATOM 548 C LYS 37 47.460 15.684 2.001 1.00 0.50 C ATOM 549 O LYS 37 46.740 16.570 1.540 1.00 0.50 O ATOM 550 CB LYS 37 49.435 15.576 0.474 1.00 0.50 C ATOM 551 CG LYS 37 50.239 14.797 -0.555 1.00 0.50 C ATOM 552 CD LYS 37 51.444 14.115 0.080 1.00 0.50 C ATOM 553 CE LYS 37 52.193 13.245 -0.923 1.00 0.50 C ATOM 554 NZ LYS 37 52.925 14.067 -1.929 1.00 0.50 N ATOM 568 N GLU 38 47.576 15.450 3.304 1.00 0.50 N ATOM 569 CA GLU 38 46.838 16.229 4.291 1.00 0.50 C ATOM 570 C GLU 38 47.336 17.669 4.339 1.00 0.50 C ATOM 571 O GLU 38 48.445 17.937 4.800 1.00 0.50 O ATOM 572 CB GLU 38 46.962 15.590 5.678 1.00 0.50 C ATOM 573 CG GLU 38 46.854 16.585 6.824 1.00 0.50 C ATOM 574 CD GLU 38 47.116 15.965 8.185 1.00 0.50 C ATOM 575 OE1 GLU 38 48.189 15.354 8.383 1.00 0.50 O ATOM 576 OE2 GLU 38 46.228 16.083 9.064 1.00 0.50 O ATOM 583 N GLU 39 46.509 18.592 3.859 1.00 0.50 N ATOM 584 CA GLU 39 46.837 20.011 3.903 1.00 0.50 C ATOM 585 C GLU 39 46.583 20.592 5.288 1.00 0.50 C ATOM 586 O GLU 39 47.214 21.570 5.687 1.00 0.50 O ATOM 587 CB GLU 39 46.021 20.781 2.859 1.00 0.50 C ATOM 588 CG GLU 39 46.411 22.248 2.736 1.00 0.50 C ATOM 589 CD GLU 39 45.619 22.994 1.677 1.00 0.50 C ATOM 590 OE1 GLU 39 44.388 22.799 1.584 1.00 0.50 O ATOM 591 OE2 GLU 39 46.243 23.777 0.921 1.00 0.50 O ATOM 598 N ILE 40 45.654 19.984 6.018 1.00 0.50 N ATOM 599 CA ILE 40 45.301 20.451 7.353 1.00 0.50 C ATOM 600 C ILE 40 44.204 19.591 7.966 1.00 0.50 C ATOM 601 O ILE 40 43.077 19.557 7.469 1.00 0.50 O ATOM 602 CB ILE 40 44.841 21.928 7.324 1.00 0.50 C ATOM 603 CG1 ILE 40 45.878 22.794 6.600 1.00 0.50 C ATOM 604 CG2 ILE 40 44.600 22.446 8.743 1.00 0.50 C ATOM 605 CD1 ILE 40 45.558 24.281 6.621 1.00 0.50 C ATOM 617 N ARG 41 44.538 18.895 9.046 1.00 0.50 N ATOM 618 CA ARG 41 43.582 18.032 9.729 1.00 0.50 C ATOM 619 C ARG 41 43.313 18.522 11.147 1.00 0.50 C ATOM 620 O ARG 41 42.556 19.471 11.353 1.00 0.50 O ATOM 621 CB ARG 41 44.093 16.590 9.768 1.00 0.50 C ATOM 622 CG ARG 41 43.228 15.657 10.602 1.00 0.50 C ATOM 623 CD ARG 41 41.904 15.357 9.913 1.00 0.50 C ATOM 624 NE ARG 41 41.187 14.268 10.570 1.00 0.50 N ATOM 625 CZ ARG 41 41.558 12.990 10.548 1.00 0.50 C ATOM 626 NH1 ARG 41 42.744 12.630 10.064 1.00 0.50 H ATOM 627 NH2 ARG 41 40.725 12.056 11.005 1.00 0.50 H ATOM 641 N LYS 42 43.934 17.867 12.121 1.00 0.50 N ATOM 642 CA LYS 42 43.763 18.235 13.523 1.00 0.50 C ATOM 643 C LYS 42 43.438 19.716 13.668 1.00 0.50 C ATOM 644 O LYS 42 42.863 20.326 12.766 1.00 0.50 O ATOM 645 CB LYS 42 45.025 17.899 14.322 1.00 0.50 C ATOM 646 CG LYS 42 44.939 18.278 15.792 1.00 0.50 C ATOM 647 CD LYS 42 46.320 18.344 16.432 1.00 0.50 C ATOM 648 CE LYS 42 46.235 18.592 17.933 1.00 0.50 C ATOM 649 NZ LYS 42 45.460 17.523 18.625 1.00 0.50 N ATOM 663 N GLU 43 43.809 20.289 14.808 1.00 0.50 N ATOM 664 CA GLU 43 43.559 21.700 15.073 1.00 0.50 C ATOM 665 C GLU 43 43.535 22.507 13.782 1.00 0.50 C ATOM 666 O GLU 43 43.729 23.723 13.794 1.00 0.50 O ATOM 667 CB GLU 43 44.624 22.264 16.019 1.00 0.50 C ATOM 668 CG GLU 43 44.604 23.783 16.130 1.00 0.50 C ATOM 669 CD GLU 43 44.618 24.280 17.565 1.00 0.50 C ATOM 670 OE1 GLU 43 45.562 23.954 18.315 1.00 0.50 O ATOM 671 OE2 GLU 43 43.664 24.999 17.946 1.00 0.50 O ATOM 678 N TRP 44 43.298 21.825 12.667 1.00 0.50 N ATOM 679 CA TRP 44 43.248 22.478 11.364 1.00 0.50 C ATOM 680 C TRP 44 43.299 23.993 11.505 1.00 0.50 C ATOM 681 O TRP 44 44.323 24.557 11.893 1.00 0.50 O ATOM 682 CB TRP 44 41.978 22.068 10.608 1.00 0.50 C ATOM 683 CG TRP 44 41.903 22.603 9.208 1.00 0.50 C ATOM 684 CD1 TRP 44 42.937 23.102 8.463 1.00 0.50 C ATOM 685 CD2 TRP 44 40.733 22.694 8.389 1.00 0.50 C ATOM 686 NE1 TRP 44 42.478 23.497 7.229 1.00 0.50 N ATOM 687 CE2 TRP 44 41.132 23.258 7.157 1.00 0.50 C ATOM 688 CE3 TRP 44 39.388 22.352 8.577 1.00 0.50 C ATOM 689 CZ2 TRP 44 40.229 23.489 6.116 1.00 0.50 C ATOM 690 CZ3 TRP 44 38.492 22.582 7.542 1.00 0.50 C ATOM 691 CH2 TRP 44 38.916 23.145 6.327 1.00 0.50 H ATOM 702 N MET 45 42.189 24.650 11.186 1.00 0.50 N ATOM 703 CA MET 45 42.104 26.102 11.277 1.00 0.50 C ATOM 704 C MET 45 40.762 26.542 11.847 1.00 0.50 C ATOM 705 O MET 45 40.704 27.357 12.768 1.00 0.50 O ATOM 706 CB MET 45 42.317 26.739 9.900 1.00 0.50 C ATOM 707 CG MET 45 42.314 28.260 9.928 1.00 0.50 C ATOM 708 SD MET 45 43.703 28.930 10.873 1.00 0.50 S ATOM 709 CE MET 45 45.060 28.576 9.763 1.00 0.50 C ATOM 719 N PHE 46 39.683 26.000 11.292 1.00 0.50 N ATOM 720 CA PHE 46 38.338 26.335 11.744 1.00 0.50 C ATOM 721 C PHE 46 38.280 26.452 13.261 1.00 0.50 C ATOM 722 O PHE 46 37.442 27.170 13.807 1.00 0.50 O ATOM 723 CB PHE 46 37.331 25.278 11.268 1.00 0.50 C ATOM 724 CG PHE 46 36.877 25.475 9.843 1.00 0.50 C ATOM 725 CD1 PHE 46 37.717 25.162 8.781 1.00 0.50 C ATOM 726 CD2 PHE 46 35.607 25.974 9.572 1.00 0.50 C ATOM 727 CE1 PHE 46 37.300 25.344 7.465 1.00 0.50 C ATOM 728 CE2 PHE 46 35.180 26.159 8.259 1.00 0.50 C ATOM 729 CZ PHE 46 36.030 25.843 7.206 1.00 0.50 C ATOM 739 N LYS 47 39.174 25.741 13.939 1.00 0.50 N ATOM 740 CA LYS 47 39.226 25.763 15.397 1.00 0.50 C ATOM 741 C LYS 47 39.067 27.180 15.931 1.00 0.50 C ATOM 742 O LYS 47 38.088 27.493 16.608 1.00 0.50 O ATOM 743 CB LYS 47 40.545 25.165 15.894 1.00 0.50 C ATOM 744 CG LYS 47 40.673 25.135 17.410 1.00 0.50 C ATOM 745 CD LYS 47 39.737 24.106 18.027 1.00 0.50 C ATOM 746 CE LYS 47 39.939 23.990 19.533 1.00 0.50 C ATOM 747 NZ LYS 47 39.038 22.966 20.135 1.00 0.50 N ATOM 761 N LEU 48 40.037 28.035 15.625 1.00 0.50 N ATOM 762 CA LEU 48 40.007 29.421 16.075 1.00 0.50 C ATOM 763 C LEU 48 38.640 30.048 15.836 1.00 0.50 C ATOM 764 O LEU 48 37.931 30.396 16.781 1.00 0.50 O ATOM 765 CB LEU 48 41.083 30.238 15.351 1.00 0.50 C ATOM 766 CG LEU 48 42.533 29.797 15.573 1.00 0.50 C ATOM 767 CD1 LEU 48 43.422 30.340 14.463 1.00 0.50 C ATOM 768 CD2 LEU 48 43.023 30.278 16.932 1.00 0.50 C ATOM 780 N VAL 49 38.273 30.192 14.567 1.00 0.50 N ATOM 781 CA VAL 49 36.990 30.778 14.201 1.00 0.50 C ATOM 782 C VAL 49 35.832 29.947 14.739 1.00 0.50 C ATOM 783 O VAL 49 36.014 28.798 15.142 1.00 0.50 O ATOM 784 CB VAL 49 36.853 30.916 12.669 1.00 0.50 C ATOM 785 CG1 VAL 49 37.846 31.938 12.126 1.00 0.50 C ATOM 786 CG2 VAL 49 37.064 29.565 11.993 1.00 0.50 C ATOM 796 N GLY 50 34.640 30.535 14.746 1.00 0.50 N ATOM 797 CA GLY 50 33.450 29.850 15.235 1.00 0.50 C ATOM 798 C GLY 50 32.839 28.968 14.155 1.00 0.50 C ATOM 799 O GLY 50 31.702 29.182 13.734 1.00 0.50 O ATOM 803 N LYS 51 33.601 27.975 13.709 1.00 0.50 N ATOM 804 CA LYS 51 33.136 27.056 12.675 1.00 0.50 C ATOM 805 C LYS 51 32.291 27.781 11.635 1.00 0.50 C ATOM 806 O LYS 51 31.150 28.159 11.901 1.00 0.50 O ATOM 807 CB LYS 51 32.327 25.916 13.298 1.00 0.50 C ATOM 808 CG LYS 51 33.154 24.982 14.170 1.00 0.50 C ATOM 809 CD LYS 51 32.303 23.852 14.737 1.00 0.50 C ATOM 810 CE LYS 51 33.123 22.917 15.618 1.00 0.50 C ATOM 811 NZ LYS 51 32.281 21.841 16.215 1.00 0.50 N ATOM 825 N GLU 52 32.859 27.973 10.449 1.00 0.50 N ATOM 826 CA GLU 52 32.159 28.652 9.365 1.00 0.50 C ATOM 827 C GLU 52 33.085 28.904 8.183 1.00 0.50 C ATOM 828 O GLU 52 32.636 29.023 7.043 1.00 0.50 O ATOM 829 CB GLU 52 31.571 29.978 9.857 1.00 0.50 C ATOM 830 CG GLU 52 30.902 29.884 11.222 1.00 0.50 C ATOM 831 CD GLU 52 30.341 31.209 11.708 1.00 0.50 C ATOM 832 OE1 GLU 52 31.076 31.983 12.359 1.00 0.50 O ATOM 833 OE2 GLU 52 29.143 31.472 11.441 1.00 0.50 O ATOM 840 N THR 53 34.383 28.986 8.461 1.00 0.50 N ATOM 841 CA THR 53 35.376 29.225 7.421 1.00 0.50 C ATOM 842 C THR 53 36.386 28.086 7.352 1.00 0.50 C ATOM 843 O THR 53 36.817 27.563 8.380 1.00 0.50 O ATOM 844 CB THR 53 36.123 30.556 7.660 1.00 0.50 C ATOM 845 OG1 THR 53 35.503 31.243 8.755 1.00 0.50 O ATOM 846 CG2 THR 53 36.080 31.441 6.422 1.00 0.50 C ATOM 854 N PHE 54 36.759 27.707 6.135 1.00 0.50 N ATOM 855 CA PHE 54 37.940 26.879 5.920 1.00 0.50 C ATOM 856 C PHE 54 38.948 27.582 5.020 1.00 0.50 C ATOM 857 O PHE 54 38.637 27.940 3.883 1.00 0.50 O ATOM 858 CB PHE 54 37.546 25.530 5.302 1.00 0.50 C ATOM 859 CG PHE 54 36.589 25.650 4.144 1.00 0.50 C ATOM 860 CD1 PHE 54 37.056 25.916 2.863 1.00 0.50 C ATOM 861 CD2 PHE 54 35.220 25.498 4.343 1.00 0.50 C ATOM 862 CE1 PHE 54 36.174 26.029 1.792 1.00 0.50 C ATOM 863 CE2 PHE 54 34.330 25.609 3.278 1.00 0.50 C ATOM 864 CZ PHE 54 34.809 25.875 2.002 1.00 0.50 C ATOM 874 N TYR 55 40.157 27.782 5.535 1.00 0.50 N ATOM 875 CA TYR 55 41.197 28.487 4.797 1.00 0.50 C ATOM 876 C TYR 55 42.183 27.511 4.167 1.00 0.50 C ATOM 877 O TYR 55 42.996 26.899 4.860 1.00 0.50 O ATOM 878 CB TYR 55 41.948 29.455 5.722 1.00 0.50 C ATOM 879 CG TYR 55 41.071 30.545 6.299 1.00 0.50 C ATOM 880 CD1 TYR 55 40.476 30.398 7.550 1.00 0.50 C ATOM 881 CD2 TYR 55 40.839 31.720 5.589 1.00 0.50 C ATOM 882 CE1 TYR 55 39.667 31.397 8.082 1.00 0.50 C ATOM 883 CE2 TYR 55 40.032 32.726 6.111 1.00 0.50 C ATOM 884 CZ TYR 55 39.451 32.556 7.357 1.00 0.50 C ATOM 885 OH TYR 55 38.653 33.550 7.877 1.00 0.50 H ATOM 895 N VAL 56 42.105 27.369 2.848 1.00 0.50 N ATOM 896 CA VAL 56 42.956 26.429 2.127 1.00 0.50 C ATOM 897 C VAL 56 44.431 26.718 2.377 1.00 0.50 C ATOM 898 O VAL 56 45.195 25.824 2.742 1.00 0.50 O ATOM 899 CB VAL 56 42.678 26.471 0.608 1.00 0.50 C ATOM 900 CG1 VAL 56 43.427 25.353 -0.111 1.00 0.50 C ATOM 901 CG2 VAL 56 41.181 26.358 0.340 1.00 0.50 C ATOM 911 N GLY 57 44.825 27.971 2.179 1.00 0.50 N ATOM 912 CA GLY 57 46.209 28.381 2.384 1.00 0.50 C ATOM 913 C GLY 57 47.050 28.122 1.140 1.00 0.50 C ATOM 914 O GLY 57 46.744 27.233 0.347 1.00 0.50 O ATOM 918 N ALA 58 48.109 28.908 0.974 1.00 0.50 N ATOM 919 CA ALA 58 48.995 28.765 -0.175 1.00 0.50 C ATOM 920 C ALA 58 48.528 29.626 -1.341 1.00 0.50 C ATOM 921 O ALA 58 49.205 29.723 -2.365 1.00 0.50 O ATOM 922 CB ALA 58 49.071 27.303 -0.603 1.00 0.50 C ATOM 928 N ALA 59 47.364 30.249 -1.182 1.00 0.50 N ATOM 929 CA ALA 59 46.803 31.102 -2.223 1.00 0.50 C ATOM 930 C ALA 59 45.871 30.316 -3.136 1.00 0.50 C ATOM 931 O ALA 59 46.254 29.288 -3.694 1.00 0.50 O ATOM 932 CB ALA 59 47.922 31.739 -3.042 1.00 0.50 C ATOM 938 N LYS 60 44.645 30.807 -3.284 1.00 0.50 N ATOM 939 CA LYS 60 43.655 30.151 -4.130 1.00 0.50 C ATOM 940 C LYS 60 42.330 29.981 -3.397 1.00 0.50 C ATOM 941 O LYS 60 42.283 30.002 -2.168 1.00 0.50 O ATOM 942 CB LYS 60 44.169 28.787 -4.595 1.00 0.50 C ATOM 943 CG LYS 60 45.383 28.866 -5.508 1.00 0.50 C ATOM 944 CD LYS 60 46.284 27.649 -5.343 1.00 0.50 C ATOM 945 CE LYS 60 46.824 27.162 -6.683 1.00 0.50 C ATOM 946 NZ LYS 60 45.730 26.697 -7.583 1.00 0.50 N ATOM 960 N THR 61 41.255 29.815 -4.161 1.00 0.50 N ATOM 961 CA THR 61 39.927 29.642 -3.585 1.00 0.50 C ATOM 962 C THR 61 40.005 29.385 -2.086 1.00 0.50 C ATOM 963 O THR 61 40.570 30.184 -1.339 1.00 0.50 O ATOM 964 CB THR 61 39.174 28.475 -4.263 1.00 0.50 C ATOM 965 OG1 THR 61 37.828 28.449 -3.774 1.00 0.50 O ATOM 966 CG2 THR 61 39.844 27.141 -3.961 1.00 0.50 C ATOM 974 N LYS 62 39.434 28.267 -1.651 1.00 0.50 N ATOM 975 CA LYS 62 39.438 27.904 -0.239 1.00 0.50 C ATOM 976 C LYS 62 38.379 26.850 0.061 1.00 0.50 C ATOM 977 O LYS 62 38.532 25.683 -0.298 1.00 0.50 O ATOM 978 CB LYS 62 39.201 29.140 0.632 1.00 0.50 C ATOM 979 CG LYS 62 40.312 30.176 0.542 1.00 0.50 C ATOM 980 CD LYS 62 39.976 31.423 1.351 1.00 0.50 C ATOM 981 CE LYS 62 41.078 32.472 1.251 1.00 0.50 C ATOM 982 NZ LYS 62 40.721 33.719 1.986 1.00 0.50 N ATOM 996 N ALA 63 37.307 27.268 0.725 1.00 0.50 N ATOM 997 CA ALA 63 36.220 26.362 1.076 1.00 0.50 C ATOM 998 C ALA 63 35.547 26.785 2.375 1.00 0.50 C ATOM 999 O ALA 63 36.212 27.203 3.323 1.00 0.50 O ATOM 1000 CB ALA 63 36.745 24.934 1.202 1.00 0.50 C ATOM 1006 N THR 64 34.223 26.674 2.413 1.00 0.50 N ATOM 1007 CA THR 64 33.457 27.046 3.596 1.00 0.50 C ATOM 1008 C THR 64 32.750 25.837 4.196 1.00 0.50 C ATOM 1009 O THR 64 32.112 25.062 3.484 1.00 0.50 O ATOM 1010 CB THR 64 32.412 28.134 3.263 1.00 0.50 C ATOM 1011 OG1 THR 64 33.097 29.310 2.814 1.00 0.50 O ATOM 1012 CG2 THR 64 31.569 28.479 4.485 1.00 0.50 C ATOM 1020 N ILE 65 32.868 25.682 5.510 1.00 0.50 N ATOM 1021 CA ILE 65 32.240 24.567 6.209 1.00 0.50 C ATOM 1022 C ILE 65 31.005 25.022 6.976 1.00 0.50 C ATOM 1023 O ILE 65 31.110 25.551 8.083 1.00 0.50 O ATOM 1024 CB ILE 65 33.230 23.890 7.186 1.00 0.50 C ATOM 1025 CG1 ILE 65 34.174 22.955 6.422 1.00 0.50 C ATOM 1026 CG2 ILE 65 32.477 23.126 8.276 1.00 0.50 C ATOM 1027 CD1 ILE 65 35.260 22.337 7.290 1.00 0.50 C ATOM 1039 N ASN 66 29.836 24.816 6.380 1.00 0.50 N ATOM 1040 CA ASN 66 28.577 25.206 7.005 1.00 0.50 C ATOM 1041 C ASN 66 28.206 24.254 8.135 1.00 0.50 C ATOM 1042 O ASN 66 27.210 23.537 8.053 1.00 0.50 O ATOM 1043 CB ASN 66 27.455 25.256 5.962 1.00 0.50 C ATOM 1044 CG ASN 66 26.183 25.877 6.508 1.00 0.50 C ATOM 1045 OD1 ASN 66 26.221 26.668 7.454 1.00 0.50 O ATOM 1046 ND2 ASN 66 25.047 25.526 5.918 1.00 0.50 N ATOM 1053 N ILE 67 29.015 24.251 9.189 1.00 0.50 N ATOM 1054 CA ILE 67 28.773 23.386 10.338 1.00 0.50 C ATOM 1055 C ILE 67 27.774 24.016 11.301 1.00 0.50 C ATOM 1056 O ILE 67 28.087 24.987 11.990 1.00 0.50 O ATOM 1057 CB ILE 67 30.088 23.078 11.092 1.00 0.50 C ATOM 1058 CG1 ILE 67 31.068 22.340 10.172 1.00 0.50 C ATOM 1059 CG2 ILE 67 29.808 22.259 12.354 1.00 0.50 C ATOM 1060 CD1 ILE 67 32.428 22.087 10.803 1.00 0.50 C ATOM 1072 N ASP 68 26.568 23.459 11.342 1.00 0.50 N ATOM 1073 CA ASP 68 25.520 23.965 12.220 1.00 0.50 C ATOM 1074 C ASP 68 25.841 23.681 13.681 1.00 0.50 C ATOM 1075 O ASP 68 26.063 22.533 14.067 1.00 0.50 O ATOM 1076 CB ASP 68 24.169 23.343 11.851 1.00 0.50 C ATOM 1077 CG ASP 68 23.016 23.900 12.664 1.00 0.50 C ATOM 1078 OD1 ASP 68 23.248 24.720 13.576 1.00 0.50 O ATOM 1079 OD2 ASP 68 21.859 23.507 12.387 1.00 0.50 O ATOM 1084 N ALA 69 25.864 24.733 14.493 1.00 0.50 N ATOM 1085 CA ALA 69 26.158 24.597 15.914 1.00 0.50 C ATOM 1086 C ALA 69 24.879 24.460 16.730 1.00 0.50 C ATOM 1087 O ALA 69 23.891 23.895 16.262 1.00 0.50 O ATOM 1088 CB ALA 69 26.963 25.799 16.403 1.00 0.50 C ATOM 1094 N ILE 70 24.906 24.978 17.954 1.00 0.50 N ATOM 1095 CA ILE 70 23.748 24.913 18.837 1.00 0.50 C ATOM 1096 C ILE 70 23.475 23.483 19.284 1.00 0.50 C ATOM 1097 O ILE 70 22.887 23.254 20.341 1.00 0.50 O ATOM 1098 CB ILE 70 22.487 25.485 18.148 1.00 0.50 C ATOM 1099 CG1 ILE 70 22.684 26.972 17.830 1.00 0.50 C ATOM 1100 CG2 ILE 70 21.251 25.279 19.024 1.00 0.50 C ATOM 1101 CD1 ILE 70 21.602 27.557 16.934 1.00 0.50 C ATOM 1113 N SER 71 23.903 22.523 18.471 1.00 0.50 N ATOM 1114 CA SER 71 23.705 21.112 18.781 1.00 0.50 C ATOM 1115 C SER 71 24.341 20.221 17.721 1.00 0.50 C ATOM 1116 O SER 71 24.192 19.000 17.754 1.00 0.50 O ATOM 1117 CB SER 71 22.211 20.796 18.896 1.00 0.50 C ATOM 1118 OG SER 71 22.014 19.417 19.164 1.00 0.50 O ATOM 1124 N GLY 72 25.047 20.840 16.782 1.00 0.50 N ATOM 1125 CA GLY 72 25.708 20.103 15.711 1.00 0.50 C ATOM 1126 C GLY 72 24.750 19.122 15.046 1.00 0.50 C ATOM 1127 O GLY 72 24.939 17.908 15.123 1.00 0.50 O ATOM 1131 N PHE 73 23.722 19.656 14.394 1.00 0.50 N ATOM 1132 CA PHE 73 22.734 18.827 13.715 1.00 0.50 C ATOM 1133 C PHE 73 22.961 18.822 12.209 1.00 0.50 C ATOM 1134 O PHE 73 23.194 17.772 11.610 1.00 0.50 O ATOM 1135 CB PHE 73 21.314 19.324 14.024 1.00 0.50 C ATOM 1136 CG PHE 73 20.249 18.681 13.172 1.00 0.50 C ATOM 1137 CD1 PHE 73 19.965 17.325 13.295 1.00 0.50 C ATOM 1138 CD2 PHE 73 19.536 19.436 12.247 1.00 0.50 C ATOM 1139 CE1 PHE 73 18.982 16.729 12.508 1.00 0.50 C ATOM 1140 CE2 PHE 73 18.552 18.848 11.455 1.00 0.50 C ATOM 1141 CZ PHE 73 18.277 17.493 11.588 1.00 0.50 C ATOM 1151 N ALA 74 22.889 20.002 11.600 1.00 0.50 N ATOM 1152 CA ALA 74 23.086 20.135 10.162 1.00 0.50 C ATOM 1153 C ALA 74 24.487 20.640 9.843 1.00 0.50 C ATOM 1154 O ALA 74 24.924 21.663 10.371 1.00 0.50 O ATOM 1155 CB ALA 74 22.043 21.081 9.573 1.00 0.50 C ATOM 1161 N TYR 75 25.188 19.917 8.977 1.00 0.50 N ATOM 1162 CA TYR 75 26.543 20.291 8.585 1.00 0.50 C ATOM 1163 C TYR 75 26.787 20.009 7.108 1.00 0.50 C ATOM 1164 O TYR 75 27.038 18.869 6.718 1.00 0.50 O ATOM 1165 CB TYR 75 27.573 19.533 9.435 1.00 0.50 C ATOM 1166 CG TYR 75 27.583 19.947 10.890 1.00 0.50 C ATOM 1167 CD1 TYR 75 27.432 21.284 11.254 1.00 0.50 C ATOM 1168 CD2 TYR 75 27.742 19.000 11.897 1.00 0.50 C ATOM 1169 CE1 TYR 75 27.443 21.669 12.592 1.00 0.50 C ATOM 1170 CE2 TYR 75 27.754 19.373 13.238 1.00 0.50 C ATOM 1171 CZ TYR 75 27.604 20.708 13.575 1.00 0.50 C ATOM 1172 OH TYR 75 27.614 21.080 14.900 1.00 0.50 H ATOM 1182 N GLU 76 26.709 21.053 6.292 1.00 0.50 N ATOM 1183 CA GLU 76 26.922 20.920 4.855 1.00 0.50 C ATOM 1184 C GLU 76 28.169 21.674 4.411 1.00 0.50 C ATOM 1185 O GLU 76 28.357 22.839 4.757 1.00 0.50 O ATOM 1186 CB GLU 76 25.702 21.432 4.084 1.00 0.50 C ATOM 1187 CG GLU 76 25.909 21.490 2.576 1.00 0.50 C ATOM 1188 CD GLU 76 24.610 21.523 1.792 1.00 0.50 C ATOM 1189 OE1 GLU 76 23.864 20.520 1.800 1.00 0.50 O ATOM 1190 OE2 GLU 76 24.338 22.567 1.151 1.00 0.50 O ATOM 1197 N TYR 77 29.019 21.000 3.643 1.00 0.50 N ATOM 1198 CA TYR 77 30.246 21.607 3.144 1.00 0.50 C ATOM 1199 C TYR 77 30.079 22.087 1.708 1.00 0.50 C ATOM 1200 O TYR 77 29.171 21.651 0.999 1.00 0.50 O ATOM 1201 CB TYR 77 31.408 20.607 3.223 1.00 0.50 C ATOM 1202 CG TYR 77 32.080 20.565 4.578 1.00 0.50 C ATOM 1203 CD1 TYR 77 32.908 21.604 4.999 1.00 0.50 C ATOM 1204 CD2 TYR 77 31.887 19.483 5.435 1.00 0.50 C ATOM 1205 CE1 TYR 77 33.530 21.568 6.243 1.00 0.50 C ATOM 1206 CE2 TYR 77 32.505 19.436 6.680 1.00 0.50 C ATOM 1207 CZ TYR 77 33.323 20.482 7.075 1.00 0.50 C ATOM 1208 OH TYR 77 33.934 20.438 8.309 1.00 0.50 H ATOM 1218 N THR 78 30.960 22.987 1.283 1.00 0.50 N ATOM 1219 CA THR 78 30.929 23.506 -0.079 1.00 0.50 C ATOM 1220 C THR 78 32.319 23.921 -0.542 1.00 0.50 C ATOM 1221 O THR 78 33.093 24.497 0.223 1.00 0.50 O ATOM 1222 CB THR 78 29.974 24.714 -0.193 1.00 0.50 C ATOM 1223 OG1 THR 78 29.391 24.965 1.092 1.00 0.50 O ATOM 1224 CG2 THR 78 28.865 24.446 -1.201 1.00 0.50 C ATOM 1232 N LEU 79 32.633 23.622 -1.798 1.00 0.50 N ATOM 1233 CA LEU 79 33.938 23.950 -2.362 1.00 0.50 C ATOM 1234 C LEU 79 33.802 24.881 -3.560 1.00 0.50 C ATOM 1235 O LEU 79 33.099 24.570 -4.522 1.00 0.50 O ATOM 1236 CB LEU 79 34.671 22.671 -2.782 1.00 0.50 C ATOM 1237 CG LEU 79 35.942 22.862 -3.615 1.00 0.50 C ATOM 1238 CD1 LEU 79 36.937 23.734 -2.862 1.00 0.50 C ATOM 1239 CD2 LEU 79 36.561 21.509 -3.943 1.00 0.50 C ATOM 1251 N GLU 80 34.475 26.024 -3.494 1.00 0.50 N ATOM 1252 CA GLU 80 34.459 26.987 -4.589 1.00 0.50 C ATOM 1253 C GLU 80 35.860 27.219 -5.139 1.00 0.50 C ATOM 1254 O GLU 80 36.802 27.463 -4.384 1.00 0.50 O ATOM 1255 CB GLU 80 33.858 28.317 -4.122 1.00 0.50 C ATOM 1256 CG GLU 80 32.380 28.229 -3.763 1.00 0.50 C ATOM 1257 CD GLU 80 31.777 29.567 -3.375 1.00 0.50 C ATOM 1258 OE1 GLU 80 32.492 30.592 -3.403 1.00 0.50 O ATOM 1259 OE2 GLU 80 30.571 29.588 -3.027 1.00 0.50 O ATOM 1266 N ILE 81 35.992 27.140 -6.459 1.00 0.50 N ATOM 1267 CA ILE 81 37.271 27.380 -7.116 1.00 0.50 C ATOM 1268 C ILE 81 37.158 28.491 -8.153 1.00 0.50 C ATOM 1269 O ILE 81 36.256 28.482 -8.990 1.00 0.50 O ATOM 1270 CB ILE 81 37.798 26.094 -7.795 1.00 0.50 C ATOM 1271 CG1 ILE 81 36.811 25.616 -8.867 1.00 0.50 C ATOM 1272 CG2 ILE 81 38.045 24.998 -6.758 1.00 0.50 C ATOM 1273 CD1 ILE 81 37.286 24.393 -9.636 1.00 0.50 C ATOM 1285 N ASN 82 38.077 29.449 -8.089 1.00 0.50 N ATOM 1286 CA ASN 82 38.070 30.579 -9.009 1.00 0.50 C ATOM 1287 C ASN 82 36.754 31.343 -8.932 1.00 0.50 C ATOM 1288 O ASN 82 36.241 31.820 -9.945 1.00 0.50 O ATOM 1289 CB ASN 82 38.324 30.103 -10.444 1.00 0.50 C ATOM 1290 CG ASN 82 39.583 29.265 -10.564 1.00 0.50 C ATOM 1291 OD1 ASN 82 40.505 29.390 -9.751 1.00 0.50 O ATOM 1292 ND2 ASN 82 39.636 28.406 -11.574 1.00 0.50 N ATOM 1299 N GLY 83 36.211 31.456 -7.725 1.00 0.50 N ATOM 1300 CA GLY 83 34.975 32.199 -7.507 1.00 0.50 C ATOM 1301 C GLY 83 33.791 31.504 -8.165 1.00 0.50 C ATOM 1302 O GLY 83 32.711 32.082 -8.291 1.00 0.50 O ATOM 1306 N LYS 84 34.000 30.261 -8.588 1.00 0.50 N ATOM 1307 CA LYS 84 32.948 29.483 -9.231 1.00 0.50 C ATOM 1308 C LYS 84 32.610 28.239 -8.419 1.00 0.50 C ATOM 1309 O LYS 84 33.491 27.454 -8.071 1.00 0.50 O ATOM 1310 CB LYS 84 33.370 29.080 -10.646 1.00 0.50 C ATOM 1311 CG LYS 84 34.531 28.098 -10.684 1.00 0.50 C ATOM 1312 CD LYS 84 35.168 28.045 -12.066 1.00 0.50 C ATOM 1313 CE LYS 84 36.412 27.163 -12.079 1.00 0.50 C ATOM 1314 NZ LYS 84 36.062 25.716 -12.164 1.00 0.50 N ATOM 1328 N SER 85 31.327 28.065 -8.119 1.00 0.50 N ATOM 1329 CA SER 85 30.869 26.918 -7.344 1.00 0.50 C ATOM 1330 C SER 85 31.259 25.609 -8.017 1.00 0.50 C ATOM 1331 O SER 85 30.890 25.355 -9.163 1.00 0.50 O ATOM 1332 CB SER 85 29.350 26.973 -7.157 1.00 0.50 C ATOM 1333 OG SER 85 28.695 26.967 -8.414 1.00 0.50 O ATOM 1339 N LEU 86 32.009 24.780 -7.298 1.00 0.50 N ATOM 1340 CA LEU 86 32.445 23.492 -7.821 1.00 0.50 C ATOM 1341 C LEU 86 31.469 22.384 -7.442 1.00 0.50 C ATOM 1342 O LEU 86 30.909 21.714 -8.309 1.00 0.50 O ATOM 1343 CB LEU 86 33.844 23.150 -7.295 1.00 0.50 C ATOM 1344 CG LEU 86 34.980 24.071 -7.748 1.00 0.50 C ATOM 1345 CD1 LEU 86 36.279 23.681 -7.054 1.00 0.50 C ATOM 1346 CD2 LEU 86 35.142 23.998 -9.261 1.00 0.50 C ATOM 1358 N LYS 87 31.272 22.197 -6.141 1.00 0.50 N ATOM 1359 CA LYS 87 30.402 21.137 -5.644 1.00 0.50 C ATOM 1360 C LYS 87 30.235 21.227 -4.133 1.00 0.50 C ATOM 1361 O LYS 87 30.873 22.050 -3.476 1.00 0.50 O ATOM 1362 CB LYS 87 30.961 19.764 -6.025 1.00 0.50 C ATOM 1363 CG LYS 87 29.958 18.630 -5.876 1.00 0.50 C ATOM 1364 CD LYS 87 30.515 17.321 -6.421 1.00 0.50 C ATOM 1365 CE LYS 87 30.591 17.331 -7.943 1.00 0.50 C ATOM 1366 NZ LYS 87 31.299 16.129 -8.469 1.00 0.50 N ATOM 1380 N LYS 88 29.373 20.376 -3.586 1.00 0.50 N ATOM 1381 CA LYS 88 29.174 20.307 -2.143 1.00 0.50 C ATOM 1382 C LYS 88 29.559 18.938 -1.599 1.00 0.50 C ATOM 1383 O LYS 88 29.686 17.972 -2.353 1.00 0.50 O ATOM 1384 CB LYS 88 27.717 20.615 -1.789 1.00 0.50 C ATOM 1385 CG LYS 88 27.366 20.329 -0.337 1.00 0.50 C ATOM 1386 CD LYS 88 25.859 20.356 -0.114 1.00 0.50 C ATOM 1387 CE LYS 88 25.491 19.927 1.301 1.00 0.50 C ATOM 1388 NZ LYS 88 24.015 19.803 1.476 1.00 0.50 N ATOM 1402 N TYR 89 29.746 18.860 -0.286 1.00 0.50 N ATOM 1403 CA TYR 89 30.104 17.605 0.364 1.00 0.50 C ATOM 1404 C TYR 89 29.066 17.211 1.409 1.00 0.50 C ATOM 1405 O TYR 89 28.873 17.915 2.400 1.00 0.50 O ATOM 1406 CB TYR 89 31.486 17.717 1.022 1.00 0.50 C ATOM 1407 CG TYR 89 32.601 18.019 0.045 1.00 0.50 C ATOM 1408 CD1 TYR 89 33.003 19.330 -0.199 1.00 0.50 C ATOM 1409 CD2 TYR 89 33.248 16.990 -0.634 1.00 0.50 C ATOM 1410 CE1 TYR 89 34.026 19.611 -1.099 1.00 0.50 C ATOM 1411 CE2 TYR 89 34.273 17.259 -1.536 1.00 0.50 C ATOM 1412 CZ TYR 89 34.655 18.572 -1.762 1.00 0.50 C ATOM 1413 OH TYR 89 35.668 18.841 -2.653 1.00 0.50 H ATOM 1423 N MET 90 28.401 16.084 1.180 1.00 0.50 N ATOM 1424 CA MET 90 27.383 15.596 2.102 1.00 0.50 C ATOM 1425 C MET 90 27.952 15.406 3.501 1.00 0.50 C ATOM 1426 O MET 90 27.398 15.906 4.481 1.00 0.50 O ATOM 1427 CB MET 90 26.792 14.276 1.598 1.00 0.50 C ATOM 1428 CG MET 90 25.927 14.433 0.355 1.00 0.50 C ATOM 1429 SD MET 90 25.349 12.843 -0.283 1.00 0.50 S ATOM 1430 CE MET 90 24.090 12.441 0.922 1.00 0.50 C ATOM 1440 OXT MET 90 28.979 14.746 3.675 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.31 47.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 62.90 51.7 118 100.0 118 ARMSMC SURFACE . . . . . . . . 76.92 45.4 108 100.0 108 ARMSMC BURIED . . . . . . . . 64.55 50.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.15 48.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 80.76 43.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 80.19 44.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 86.90 38.6 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 63.71 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.66 45.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 65.75 50.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 71.41 48.7 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 72.32 45.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 73.17 45.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.04 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 66.04 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 61.41 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 67.74 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 60.65 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.92 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 78.92 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 74.68 50.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.92 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 73.16 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.21 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.21 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0579 CRMSCA SECONDARY STRUCTURE . . 3.92 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.73 55 100.0 55 CRMSCA BURIED . . . . . . . . 4.28 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.20 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 4.03 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.68 269 100.0 269 CRMSMC BURIED . . . . . . . . 4.35 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.38 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 7.42 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.68 252 100.0 252 CRMSSC SURFACE . . . . . . . . 8.37 204 100.0 204 CRMSSC BURIED . . . . . . . . 5.81 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.32 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.92 488 100.0 488 CRMSALL SURFACE . . . . . . . . 7.04 424 100.0 424 CRMSALL BURIED . . . . . . . . 5.11 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.809 0.684 0.342 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.827 0.641 0.320 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.364 0.716 0.358 55 100.0 55 ERRCA BURIED . . . . . . . . 2.937 0.634 0.317 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.814 0.687 0.344 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.910 0.644 0.322 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.353 0.720 0.360 269 100.0 269 ERRMC BURIED . . . . . . . . 2.975 0.636 0.318 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.558 0.750 0.375 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.616 0.755 0.377 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.188 0.705 0.353 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.679 0.801 0.401 204 100.0 204 ERRSC BURIED . . . . . . . . 4.053 0.681 0.341 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.629 0.716 0.358 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.541 0.675 0.337 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.405 0.756 0.378 424 100.0 424 ERRALL BURIED . . . . . . . . 3.503 0.659 0.329 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 25 35 59 83 90 90 DISTCA CA (P) 11.11 27.78 38.89 65.56 92.22 90 DISTCA CA (RMS) 0.79 1.32 1.75 2.87 4.41 DISTCA ALL (N) 52 163 252 421 637 716 716 DISTALL ALL (P) 7.26 22.77 35.20 58.80 88.97 716 DISTALL ALL (RMS) 0.76 1.30 1.84 2.95 4.90 DISTALL END of the results output