####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS208_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS208_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.89 4.89 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 4 - 24 1.60 6.16 LCS_AVERAGE: 16.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.98 5.47 LCS_AVERAGE: 9.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 90 3 4 4 6 6 8 20 28 32 44 52 55 63 67 67 72 76 79 82 85 LCS_GDT T 2 T 2 4 5 90 3 4 4 5 9 12 17 24 30 52 54 60 66 70 74 77 78 83 86 87 LCS_GDT D 3 D 3 4 5 90 3 4 4 5 8 21 26 34 44 53 64 67 71 73 77 81 82 85 87 88 LCS_GDT L 4 L 4 4 21 90 3 4 4 7 23 40 50 55 62 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 5 V 5 8 21 90 4 17 35 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT A 6 A 6 8 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 7 V 7 8 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT W 8 W 8 8 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT D 9 D 9 8 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 10 V 10 8 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT A 11 A 11 8 21 90 7 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT L 12 L 12 8 21 90 4 7 18 31 47 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT S 13 S 13 6 21 90 4 6 11 18 27 37 48 53 60 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT D 14 D 14 11 21 90 8 26 38 46 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 15 G 15 11 21 90 6 18 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 16 V 16 11 21 90 9 30 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT H 17 H 17 11 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 18 K 18 11 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 19 I 19 11 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 20 E 20 11 21 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT F 21 F 21 11 21 90 13 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 22 E 22 11 21 90 11 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT H 23 H 23 11 21 90 6 20 37 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 24 G 24 11 21 90 4 20 39 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT T 25 T 25 4 11 90 3 4 4 4 5 8 10 19 31 51 59 65 70 73 81 83 85 85 87 88 LCS_GDT T 26 T 26 4 5 90 3 4 4 4 4 7 11 23 31 55 59 68 77 79 81 83 85 85 87 88 LCS_GDT S 27 S 27 4 14 90 3 4 21 32 42 50 53 55 59 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 28 G 28 4 14 90 3 4 4 7 30 44 52 53 55 61 70 74 77 79 81 83 85 85 87 88 LCS_GDT K 29 K 29 4 14 90 3 3 5 22 38 45 52 55 57 65 71 74 77 79 81 83 85 85 87 88 LCS_GDT R 30 R 30 11 14 90 6 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 31 V 31 11 14 90 6 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 32 V 32 11 15 90 9 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT Y 33 Y 33 11 15 90 13 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 34 V 34 11 15 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT D 35 D 35 11 15 90 6 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 36 G 36 11 15 90 5 30 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 37 K 37 11 15 90 6 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 38 E 38 11 15 90 9 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 39 E 39 11 15 90 9 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 40 I 40 11 15 90 4 13 31 42 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT R 41 R 41 6 15 90 4 4 10 15 24 36 45 53 57 65 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 42 K 42 6 15 90 4 5 8 15 21 31 39 47 57 63 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 43 E 43 6 15 90 4 5 7 15 20 24 26 32 44 57 64 74 77 79 81 83 85 85 87 88 LCS_GDT W 44 W 44 6 15 90 4 5 7 15 19 24 25 32 36 41 51 61 72 77 79 83 85 85 87 88 LCS_GDT M 45 M 45 4 15 90 3 4 10 16 24 34 43 53 57 64 71 74 77 79 81 83 85 85 87 88 LCS_GDT F 46 F 46 4 15 90 3 6 10 15 21 24 29 36 53 59 64 73 76 78 80 83 85 85 87 88 LCS_GDT K 47 K 47 4 8 90 3 3 6 11 19 34 45 53 57 64 71 74 77 79 81 83 85 85 87 88 LCS_GDT L 48 L 48 4 8 90 3 3 4 5 9 13 15 49 55 64 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 49 V 49 8 10 90 6 17 33 42 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 50 G 50 8 10 90 5 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 51 K 51 8 10 90 3 30 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 52 E 52 8 10 90 7 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT T 53 T 53 8 11 90 4 29 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT F 54 F 54 8 11 90 4 24 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT Y 55 Y 55 8 11 90 4 9 29 45 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT V 56 V 56 8 11 90 4 9 26 45 47 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 57 G 57 8 11 90 4 9 13 23 39 47 51 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT A 58 A 58 6 12 90 3 5 7 10 18 30 49 57 63 66 70 74 77 79 81 83 85 85 87 88 LCS_GDT A 59 A 59 6 12 90 3 6 9 16 32 38 48 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 60 K 60 5 12 90 3 6 12 14 23 30 48 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT T 61 T 61 9 12 90 3 7 9 10 23 30 48 57 63 66 70 74 77 79 81 83 85 85 87 88 LCS_GDT K 62 K 62 9 12 90 3 4 8 10 12 30 33 57 62 66 69 74 77 79 81 83 85 85 87 88 LCS_GDT A 63 A 63 9 12 90 3 7 9 10 12 30 42 57 63 66 69 74 77 79 81 83 85 85 87 88 LCS_GDT T 64 T 64 9 12 90 6 8 12 16 23 36 48 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 65 I 65 9 12 90 6 7 9 10 18 30 46 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT N 66 N 66 9 12 90 6 7 9 10 18 25 48 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 67 I 67 9 12 90 6 7 9 10 12 18 45 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT D 68 D 68 9 12 90 6 7 9 10 12 25 45 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT A 69 A 69 9 12 90 6 7 9 10 12 25 45 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 70 I 70 4 12 90 3 4 6 8 12 12 21 32 56 65 67 72 76 79 81 83 85 85 87 88 LCS_GDT S 71 S 71 4 15 90 3 4 4 11 16 18 24 31 43 48 56 65 73 79 81 83 85 85 87 88 LCS_GDT G 72 G 72 4 15 90 3 4 4 6 10 16 27 40 47 56 59 62 74 79 81 83 85 85 87 88 LCS_GDT F 73 F 73 14 16 90 8 27 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT A 74 A 74 14 16 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT Y 75 Y 75 14 16 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 76 E 76 14 16 90 8 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT Y 77 Y 77 14 16 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT T 78 T 78 14 16 90 6 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT L 79 L 79 14 16 90 12 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT E 80 E 80 14 16 90 12 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT I 81 I 81 14 16 90 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT N 82 N 82 14 16 90 9 24 41 46 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT G 83 G 83 14 16 90 9 24 39 46 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 84 K 84 14 16 90 14 25 41 46 48 52 53 56 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT S 85 S 85 14 16 90 13 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT L 86 L 86 14 16 90 3 8 26 44 47 52 53 55 63 66 71 74 77 79 81 83 85 85 87 88 LCS_GDT K 87 K 87 5 16 90 3 5 10 20 25 31 43 51 57 63 70 74 77 79 81 83 85 85 87 88 LCS_GDT K 88 K 88 5 16 90 3 8 16 27 35 47 52 53 60 65 71 74 77 79 81 83 85 85 87 88 LCS_GDT Y 89 Y 89 5 13 90 3 4 5 6 16 21 29 36 43 51 54 61 68 73 75 77 83 85 87 88 LCS_GDT M 90 M 90 3 13 90 0 3 3 5 25 31 42 46 50 56 63 70 71 73 80 83 84 85 87 88 LCS_AVERAGE LCS_A: 42.10 ( 9.68 16.62 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 31 41 46 48 52 53 57 63 66 71 74 77 79 81 83 85 85 87 88 GDT PERCENT_AT 15.56 34.44 45.56 51.11 53.33 57.78 58.89 63.33 70.00 73.33 78.89 82.22 85.56 87.78 90.00 92.22 94.44 94.44 96.67 97.78 GDT RMS_LOCAL 0.30 0.71 0.93 1.08 1.20 1.40 1.53 2.52 2.50 2.66 3.22 3.32 3.50 3.67 3.87 4.04 4.26 4.26 4.46 4.57 GDT RMS_ALL_AT 5.32 5.07 5.08 5.14 5.09 5.09 5.06 5.28 5.13 5.18 4.91 4.94 4.94 4.93 4.93 4.96 4.97 4.94 4.92 4.92 # Checking swapping # possible swapping detected: D 9 D 9 # possible swapping detected: F 21 F 21 # possible swapping detected: Y 33 Y 33 # possible swapping detected: D 35 D 35 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: F 73 F 73 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 12.702 0 0.513 1.157 17.279 1.190 0.595 LGA T 2 T 2 11.205 0 0.424 0.829 14.783 0.000 0.000 LGA D 3 D 3 9.289 0 0.257 1.191 14.336 7.143 3.571 LGA L 4 L 4 4.701 0 0.561 1.367 8.856 44.524 27.738 LGA V 5 V 5 1.669 0 0.692 1.500 6.390 75.000 53.537 LGA A 6 A 6 0.265 0 0.061 0.054 0.562 95.238 96.190 LGA V 7 V 7 0.607 0 0.031 0.102 1.069 90.476 89.184 LGA W 8 W 8 0.441 0 0.053 1.150 8.393 92.857 49.864 LGA D 9 D 9 0.535 0 0.051 0.390 1.325 90.476 89.405 LGA V 10 V 10 1.133 0 0.086 0.187 1.667 85.952 82.789 LGA A 11 A 11 2.062 0 0.133 0.133 3.133 61.190 61.905 LGA L 12 L 12 3.734 0 0.080 1.404 5.532 37.738 43.393 LGA S 13 S 13 6.237 0 0.336 0.795 8.417 21.667 16.032 LGA D 14 D 14 3.361 0 0.190 1.116 6.684 48.333 35.119 LGA G 15 G 15 3.111 0 0.152 0.152 3.121 53.571 53.571 LGA V 16 V 16 2.533 0 0.153 0.612 3.245 55.357 58.299 LGA H 17 H 17 1.812 0 0.046 1.571 5.413 77.143 58.286 LGA K 18 K 18 1.351 0 0.299 0.999 2.982 77.262 71.376 LGA I 19 I 19 1.250 0 0.045 0.767 3.421 85.952 79.762 LGA E 20 E 20 0.713 0 0.023 0.622 1.540 90.476 86.508 LGA F 21 F 21 0.799 0 0.057 0.368 1.485 90.476 87.186 LGA E 22 E 22 1.239 0 0.683 0.981 3.970 72.024 83.386 LGA H 23 H 23 1.505 0 0.111 0.559 3.616 65.595 57.000 LGA G 24 G 24 2.251 0 0.482 0.482 4.172 56.667 56.667 LGA T 25 T 25 8.538 0 0.656 1.379 12.589 4.881 2.789 LGA T 26 T 26 8.661 0 0.192 0.231 10.335 4.881 3.197 LGA S 27 S 27 5.969 0 0.490 0.531 6.426 18.214 21.746 LGA G 28 G 28 7.224 0 0.529 0.529 7.224 15.476 15.476 LGA K 29 K 29 6.137 0 0.601 0.743 7.247 18.452 16.720 LGA R 30 R 30 1.586 0 0.248 2.200 9.027 57.976 44.459 LGA V 31 V 31 1.337 0 0.064 1.227 4.187 81.429 73.878 LGA V 32 V 32 1.304 0 0.067 0.266 1.883 79.286 78.980 LGA Y 33 Y 33 1.091 0 0.153 0.892 4.367 75.119 66.270 LGA V 34 V 34 1.706 0 0.057 1.363 4.089 79.286 70.272 LGA D 35 D 35 1.666 0 0.052 0.255 2.873 77.143 70.060 LGA G 36 G 36 1.584 0 0.170 0.170 1.885 75.000 75.000 LGA K 37 K 37 0.703 0 0.033 1.165 6.539 90.476 72.169 LGA E 38 E 38 0.702 0 0.069 0.549 2.371 90.476 81.005 LGA E 39 E 39 1.229 0 0.643 0.765 2.738 77.262 75.079 LGA I 40 I 40 3.262 0 0.042 1.475 7.501 37.976 29.762 LGA R 41 R 41 6.870 0 0.573 1.115 13.665 12.738 5.325 LGA K 42 K 42 8.986 0 0.132 0.925 10.555 2.024 2.646 LGA E 43 E 43 10.362 0 0.439 1.135 11.667 0.119 0.106 LGA W 44 W 44 13.088 0 0.056 0.794 20.739 0.000 0.000 LGA M 45 M 45 9.600 0 0.134 1.317 12.397 0.119 8.869 LGA F 46 F 46 12.551 0 0.630 0.988 20.733 0.000 0.000 LGA K 47 K 47 9.007 0 0.620 1.546 10.372 1.429 5.820 LGA L 48 L 48 9.303 0 0.248 0.651 13.371 8.333 4.167 LGA V 49 V 49 4.107 0 0.213 0.270 6.604 38.571 32.177 LGA G 50 G 50 2.027 0 0.210 0.210 4.270 55.952 55.952 LGA K 51 K 51 2.265 0 0.266 1.088 3.697 68.810 63.545 LGA E 52 E 52 1.168 0 0.039 1.238 7.983 77.143 53.545 LGA T 53 T 53 1.361 0 0.512 1.283 3.357 75.357 68.980 LGA F 54 F 54 1.182 0 0.069 0.227 2.631 77.143 73.203 LGA Y 55 Y 55 2.025 0 0.054 1.369 7.429 66.786 49.206 LGA V 56 V 56 2.578 0 0.094 1.010 3.555 60.952 56.327 LGA G 57 G 57 4.013 0 0.102 0.102 4.013 45.119 45.119 LGA A 58 A 58 4.539 0 0.030 0.031 5.248 35.833 33.905 LGA A 59 A 59 3.523 0 0.691 0.649 3.734 48.333 47.333 LGA K 60 K 60 4.477 0 0.295 0.660 10.048 35.714 19.894 LGA T 61 T 61 4.032 0 0.064 1.167 5.777 43.452 43.333 LGA K 62 K 62 4.695 0 0.119 0.892 4.796 31.429 50.000 LGA A 63 A 63 4.661 0 0.100 0.109 5.340 32.857 31.524 LGA T 64 T 64 3.547 0 0.034 0.878 5.309 43.333 44.898 LGA I 65 I 65 4.011 0 0.099 1.076 6.461 38.690 36.369 LGA N 66 N 66 3.891 0 0.029 0.784 6.016 40.238 33.631 LGA I 67 I 67 4.487 0 0.059 1.446 9.795 35.714 26.429 LGA D 68 D 68 3.973 0 0.133 0.534 6.322 40.238 36.250 LGA A 69 A 69 3.946 0 0.067 0.069 5.181 34.762 40.762 LGA I 70 I 70 8.273 0 0.249 1.054 15.107 9.048 4.524 LGA S 71 S 71 10.430 0 0.257 0.753 13.435 0.357 0.238 LGA G 72 G 72 10.258 0 0.104 0.104 10.258 3.095 3.095 LGA F 73 F 73 3.242 0 0.411 0.709 5.575 48.333 51.255 LGA A 74 A 74 2.889 0 0.074 0.082 3.233 55.357 55.714 LGA Y 75 Y 75 2.389 0 0.069 1.348 10.947 64.762 36.111 LGA E 76 E 76 1.856 0 0.059 0.641 5.349 68.810 57.566 LGA Y 77 Y 77 1.804 0 0.025 0.658 2.692 72.857 70.397 LGA T 78 T 78 1.749 0 0.036 1.087 3.353 72.857 69.592 LGA L 79 L 79 1.779 0 0.061 1.003 3.140 72.857 67.024 LGA E 80 E 80 2.230 0 0.052 1.022 3.673 64.762 60.688 LGA I 81 I 81 2.387 0 0.042 1.079 3.472 62.857 59.167 LGA N 82 N 82 2.849 0 0.049 0.523 3.236 55.357 55.357 LGA G 83 G 83 3.000 0 0.122 0.122 3.000 57.143 57.143 LGA K 84 K 84 2.910 0 0.062 1.349 3.473 60.952 57.302 LGA S 85 S 85 2.109 0 0.088 0.433 3.852 55.714 56.270 LGA L 86 L 86 4.234 0 0.078 1.468 9.204 43.571 29.524 LGA K 87 K 87 6.519 0 0.074 1.483 14.623 16.310 7.566 LGA K 88 K 88 5.295 0 0.095 1.174 8.478 15.595 39.312 LGA Y 89 Y 89 9.899 0 0.117 0.930 14.230 5.833 1.944 LGA M 90 M 90 8.289 0 0.146 0.887 10.761 2.262 1.548 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.885 4.781 5.849 47.995 43.876 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 57 2.52 60.278 51.221 2.177 LGA_LOCAL RMSD: 2.519 Number of atoms: 57 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.280 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.885 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.710150 * X + -0.410849 * Y + 0.571743 * Z + 166.306473 Y_new = -0.153706 * X + 0.882960 * Y + 0.443573 * Z + -40.285324 Z_new = -0.687068 * X + 0.227123 * Y + -0.690183 * Z + 67.906097 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.928439 0.757446 2.823678 [DEG: -167.7872 43.3985 161.7849 ] ZXZ: 2.230622 2.332539 -1.251536 [DEG: 127.8052 133.6446 -71.7078 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS208_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS208_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 57 2.52 51.221 4.89 REMARK ---------------------------------------------------------- MOLECULE T0540TS208_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 26.523 8.057 5.630 1.00 0.00 N ATOM 2 CA MET 1 26.268 7.833 4.195 1.00 0.00 C ATOM 3 CB MET 1 25.201 8.701 3.665 1.00 0.00 C ATOM 4 CG MET 1 24.180 9.136 4.711 1.00 0.00 C ATOM 5 SD MET 1 22.986 7.854 5.176 1.00 0.00 S ATOM 6 CE MET 1 22.503 8.728 6.691 1.00 0.00 C ATOM 7 C MET 1 27.406 8.363 3.381 1.00 0.00 C ATOM 8 O MET 1 28.550 8.395 3.826 1.00 0.00 O ATOM 9 N THR 2 27.064 8.851 2.159 1.00 0.00 N ATOM 10 CA THR 2 27.917 9.775 1.473 1.00 0.00 C ATOM 11 CB THR 2 27.734 9.963 0.097 1.00 0.00 C ATOM 12 OG1 THR 2 27.700 8.708 -0.574 1.00 0.00 O ATOM 13 CG2 THR 2 28.974 10.731 -0.411 1.00 0.00 C ATOM 14 C THR 2 27.419 11.140 1.877 1.00 0.00 C ATOM 15 O THR 2 27.032 11.959 1.040 1.00 0.00 O ATOM 16 N ASP 3 27.383 11.431 3.175 1.00 0.00 N ATOM 17 CA ASP 3 27.133 12.771 3.593 1.00 0.00 C ATOM 18 CB ASP 3 25.829 12.885 4.350 1.00 0.00 C ATOM 19 CG ASP 3 24.945 13.943 3.702 1.00 0.00 C ATOM 20 OD1 ASP 3 23.820 14.159 4.226 1.00 0.00 O ATOM 21 OD2 ASP 3 25.373 14.551 2.686 1.00 0.00 O ATOM 22 C ASP 3 28.224 12.932 4.597 1.00 0.00 C ATOM 23 O ASP 3 28.609 14.039 4.971 1.00 0.00 O ATOM 24 N LEU 4 28.758 11.763 5.021 1.00 0.00 N ATOM 25 CA LEU 4 29.865 11.624 5.914 1.00 0.00 C ATOM 26 CB LEU 4 30.141 10.127 6.262 1.00 0.00 C ATOM 27 CG LEU 4 29.891 9.781 7.743 1.00 0.00 C ATOM 28 CD1 LEU 4 30.952 8.801 8.270 1.00 0.00 C ATOM 29 CD2 LEU 4 29.768 11.039 8.615 1.00 0.00 C ATOM 30 C LEU 4 31.043 12.292 5.277 1.00 0.00 C ATOM 31 O LEU 4 31.637 13.185 5.878 1.00 0.00 O ATOM 32 N VAL 5 31.408 11.903 4.038 1.00 0.00 N ATOM 33 CA VAL 5 32.620 12.435 3.478 1.00 0.00 C ATOM 34 CB VAL 5 33.601 11.326 3.083 1.00 0.00 C ATOM 35 CG1 VAL 5 33.098 10.668 1.788 1.00 0.00 C ATOM 36 CG2 VAL 5 35.023 11.912 2.998 1.00 0.00 C ATOM 37 C VAL 5 32.291 13.275 2.285 1.00 0.00 C ATOM 38 O VAL 5 31.276 13.071 1.618 1.00 0.00 O ATOM 39 N ALA 6 33.154 14.271 2.006 1.00 0.00 N ATOM 40 CA ALA 6 32.933 15.150 0.899 1.00 0.00 C ATOM 41 CB ALA 6 32.827 16.630 1.321 1.00 0.00 C ATOM 42 C ALA 6 34.077 14.978 -0.048 1.00 0.00 C ATOM 43 O ALA 6 35.216 14.782 0.372 1.00 0.00 O ATOM 44 N VAL 7 33.799 14.999 -1.369 1.00 0.00 N ATOM 45 CA VAL 7 34.843 14.687 -2.303 1.00 0.00 C ATOM 46 CB VAL 7 34.776 13.268 -2.835 1.00 0.00 C ATOM 47 CG1 VAL 7 35.996 13.015 -3.739 1.00 0.00 C ATOM 48 CG2 VAL 7 34.660 12.303 -1.641 1.00 0.00 C ATOM 49 C VAL 7 34.732 15.599 -3.481 1.00 0.00 C ATOM 50 O VAL 7 33.636 15.959 -3.913 1.00 0.00 O ATOM 51 N TRP 8 35.893 16.006 -4.030 1.00 0.00 N ATOM 52 CA TRP 8 35.881 16.937 -5.119 1.00 0.00 C ATOM 53 CB TRP 8 36.096 18.375 -4.635 1.00 0.00 C ATOM 54 CG TRP 8 37.195 19.208 -5.209 1.00 0.00 C ATOM 55 CD2 TRP 8 38.136 19.948 -4.418 1.00 0.00 C ATOM 56 CD1 TRP 8 37.493 19.466 -6.503 1.00 0.00 C ATOM 57 NE1 TRP 8 38.525 20.369 -6.570 1.00 0.00 N ATOM 58 CE2 TRP 8 38.948 20.653 -5.299 1.00 0.00 C ATOM 59 CE3 TRP 8 38.303 20.044 -3.069 1.00 0.00 C ATOM 60 CZ2 TRP 8 39.952 21.463 -4.849 1.00 0.00 C ATOM 61 CZ3 TRP 8 39.331 20.835 -2.609 1.00 0.00 C ATOM 62 CH2 TRP 8 40.142 21.530 -3.484 1.00 0.00 H ATOM 63 C TRP 8 36.943 16.542 -6.086 1.00 0.00 C ATOM 64 O TRP 8 38.031 16.131 -5.689 1.00 0.00 O ATOM 65 N ASP 9 36.640 16.625 -7.397 1.00 0.00 N ATOM 66 CA ASP 9 37.571 16.154 -8.381 1.00 0.00 C ATOM 67 CB ASP 9 37.072 14.905 -9.108 1.00 0.00 C ATOM 68 CG ASP 9 37.715 13.690 -8.462 1.00 0.00 C ATOM 69 OD1 ASP 9 37.046 12.623 -8.392 1.00 0.00 O ATOM 70 OD2 ASP 9 38.893 13.817 -8.033 1.00 0.00 O ATOM 71 C ASP 9 37.821 17.263 -9.352 1.00 0.00 C ATOM 72 O ASP 9 36.917 17.715 -10.051 1.00 0.00 O ATOM 73 N VAL 10 39.073 17.758 -9.387 1.00 0.00 N ATOM 74 CA VAL 10 39.373 18.839 -10.271 1.00 0.00 C ATOM 75 CB VAL 10 39.261 20.208 -9.611 1.00 0.00 C ATOM 76 CG1 VAL 10 37.797 20.465 -9.240 1.00 0.00 C ATOM 77 CG2 VAL 10 40.387 20.378 -8.592 1.00 0.00 C ATOM 78 C VAL 10 40.773 18.672 -10.723 1.00 0.00 C ATOM 79 O VAL 10 41.596 18.079 -10.026 1.00 0.00 O ATOM 80 N ALA 11 41.073 19.184 -11.927 1.00 0.00 N ATOM 81 CA ALA 11 42.363 18.950 -12.484 1.00 0.00 C ATOM 82 CB ALA 11 42.393 19.019 -13.991 1.00 0.00 C ATOM 83 C ALA 11 43.316 19.966 -11.948 1.00 0.00 C ATOM 84 O ALA 11 43.353 21.112 -12.400 1.00 0.00 O ATOM 85 N LEU 12 44.113 19.541 -10.948 1.00 0.00 N ATOM 86 CA LEU 12 44.996 20.433 -10.265 1.00 0.00 C ATOM 87 CB LEU 12 44.656 20.519 -8.768 1.00 0.00 C ATOM 88 CG LEU 12 45.353 21.669 -8.028 1.00 0.00 C ATOM 89 CD1 LEU 12 44.659 23.021 -8.278 1.00 0.00 C ATOM 90 CD2 LEU 12 45.491 21.339 -6.536 1.00 0.00 C ATOM 91 C LEU 12 46.378 19.893 -10.416 1.00 0.00 C ATOM 92 O LEU 12 46.574 18.685 -10.515 1.00 0.00 O ATOM 93 N SER 13 47.380 20.793 -10.460 1.00 0.00 N ATOM 94 CA SER 13 48.729 20.342 -10.644 1.00 0.00 C ATOM 95 CB SER 13 49.181 19.450 -9.478 1.00 0.00 C ATOM 96 OG SER 13 50.579 19.207 -9.559 1.00 0.00 O ATOM 97 C SER 13 48.780 19.622 -11.949 1.00 0.00 C ATOM 98 O SER 13 49.570 18.697 -12.123 1.00 0.00 O ATOM 99 N ASP 14 47.952 20.081 -12.910 1.00 0.00 N ATOM 100 CA ASP 14 47.978 19.568 -14.248 1.00 0.00 C ATOM 101 CB ASP 14 49.284 19.909 -14.957 1.00 0.00 C ATOM 102 CG ASP 14 49.220 21.358 -15.425 1.00 0.00 C ATOM 103 OD1 ASP 14 48.085 21.899 -15.505 1.00 0.00 O ATOM 104 OD2 ASP 14 50.303 21.941 -15.705 1.00 0.00 O ATOM 105 C ASP 14 47.830 18.087 -14.147 1.00 0.00 C ATOM 106 O ASP 14 48.530 17.330 -14.819 1.00 0.00 O ATOM 107 N GLY 15 46.879 17.645 -13.299 1.00 0.00 N ATOM 108 CA GLY 15 46.557 16.257 -13.137 1.00 0.00 C ATOM 109 C GLY 15 45.258 16.229 -12.417 1.00 0.00 C ATOM 110 O GLY 15 44.911 17.164 -11.698 1.00 0.00 O ATOM 111 N VAL 16 44.485 15.149 -12.595 1.00 0.00 N ATOM 112 CA VAL 16 43.242 15.068 -11.891 1.00 0.00 C ATOM 113 CB VAL 16 42.393 13.959 -12.430 1.00 0.00 C ATOM 114 CG1 VAL 16 41.138 14.578 -13.070 1.00 0.00 C ATOM 115 CG2 VAL 16 43.248 13.107 -13.396 1.00 0.00 C ATOM 116 C VAL 16 43.554 14.862 -10.451 1.00 0.00 C ATOM 117 O VAL 16 44.123 13.844 -10.065 1.00 0.00 O ATOM 118 N HIS 17 43.216 15.861 -9.615 1.00 0.00 N ATOM 119 CA HIS 17 43.535 15.735 -8.231 1.00 0.00 C ATOM 120 ND1 HIS 17 43.975 18.612 -5.770 1.00 0.00 N ATOM 121 CG HIS 17 43.542 18.013 -6.935 1.00 0.00 C ATOM 122 CB HIS 17 44.325 16.952 -7.664 1.00 0.00 C ATOM 123 NE2 HIS 17 42.029 19.549 -6.272 1.00 0.00 N ATOM 124 CD2 HIS 17 42.351 18.599 -7.227 1.00 0.00 C ATOM 125 CE1 HIS 17 43.033 19.523 -5.417 1.00 0.00 C ATOM 126 C HIS 17 42.248 15.531 -7.504 1.00 0.00 C ATOM 127 O HIS 17 41.220 16.117 -7.848 1.00 0.00 O ATOM 128 N LYS 18 42.260 14.640 -6.499 1.00 0.00 N ATOM 129 CA LYS 18 41.023 14.335 -5.862 1.00 0.00 C ATOM 130 CB LYS 18 40.922 12.780 -5.734 1.00 0.00 C ATOM 131 CG LYS 18 40.979 12.040 -7.077 1.00 0.00 C ATOM 132 CD LYS 18 40.962 10.516 -6.939 1.00 0.00 C ATOM 133 CE LYS 18 39.924 9.837 -7.835 1.00 0.00 C ATOM 134 NZ LYS 18 38.783 9.363 -7.018 1.00 0.00 N ATOM 135 C LYS 18 40.885 15.389 -4.828 1.00 0.00 C ATOM 136 O LYS 18 41.538 16.421 -4.979 1.00 0.00 O ATOM 137 N ILE 19 40.018 15.251 -3.825 1.00 0.00 N ATOM 138 CA ILE 19 40.145 16.090 -2.670 1.00 0.00 C ATOM 139 CB ILE 19 40.019 17.604 -2.775 1.00 0.00 C ATOM 140 CG2 ILE 19 39.510 17.982 -1.372 1.00 0.00 C ATOM 141 CG1 ILE 19 41.319 18.372 -3.082 1.00 0.00 C ATOM 142 CD1 ILE 19 42.310 18.386 -1.922 1.00 0.00 C ATOM 143 C ILE 19 39.008 15.676 -1.793 1.00 0.00 C ATOM 144 O ILE 19 37.852 15.693 -2.212 1.00 0.00 O ATOM 145 N GLU 20 39.309 15.251 -0.552 1.00 0.00 N ATOM 146 CA GLU 20 38.282 14.660 0.258 1.00 0.00 C ATOM 147 CB GLU 20 38.557 13.174 0.526 1.00 0.00 C ATOM 148 CG GLU 20 40.053 12.830 0.518 1.00 0.00 C ATOM 149 CD GLU 20 40.211 11.326 0.718 1.00 0.00 C ATOM 150 OE1 GLU 20 39.188 10.648 1.004 1.00 0.00 O ATOM 151 OE2 GLU 20 41.363 10.835 0.589 1.00 0.00 O ATOM 152 C GLU 20 38.232 15.405 1.557 1.00 0.00 C ATOM 153 O GLU 20 39.267 15.720 2.141 1.00 0.00 O ATOM 154 N PHE 21 37.014 15.726 2.035 1.00 0.00 N ATOM 155 CA PHE 21 36.860 16.451 3.263 1.00 0.00 C ATOM 156 CB PHE 21 35.927 17.664 3.107 1.00 0.00 C ATOM 157 CG PHE 21 35.478 18.061 4.460 1.00 0.00 C ATOM 158 CD1 PHE 21 34.296 17.585 4.974 1.00 0.00 C ATOM 159 CD2 PHE 21 36.240 18.921 5.210 1.00 0.00 C ATOM 160 CE1 PHE 21 33.886 17.963 6.234 1.00 0.00 C ATOM 161 CE2 PHE 21 35.839 19.302 6.466 1.00 0.00 C ATOM 162 CZ PHE 21 34.659 18.821 6.983 1.00 0.00 C ATOM 163 C PHE 21 36.320 15.476 4.284 1.00 0.00 C ATOM 164 O PHE 21 35.343 14.789 3.999 1.00 0.00 O ATOM 165 N GLU 22 36.961 15.330 5.481 1.00 0.00 N ATOM 166 CA GLU 22 36.796 14.040 6.106 1.00 0.00 C ATOM 167 CB GLU 22 37.994 13.306 6.660 1.00 0.00 C ATOM 168 CG GLU 22 37.796 11.833 6.989 1.00 0.00 C ATOM 169 CD GLU 22 38.765 11.539 8.120 1.00 0.00 C ATOM 170 OE1 GLU 22 38.539 10.545 8.859 1.00 0.00 O ATOM 171 OE2 GLU 22 39.747 12.316 8.266 1.00 0.00 O ATOM 172 C GLU 22 35.640 13.832 7.020 1.00 0.00 C ATOM 173 O GLU 22 35.204 12.697 7.213 1.00 0.00 O ATOM 174 N HIS 23 35.108 14.892 7.626 1.00 0.00 N ATOM 175 CA HIS 23 34.252 14.722 8.757 1.00 0.00 C ATOM 176 ND1 HIS 23 31.600 16.452 8.880 1.00 0.00 N ATOM 177 CG HIS 23 31.808 15.138 9.244 1.00 0.00 C ATOM 178 CB HIS 23 32.810 14.224 8.589 1.00 0.00 C ATOM 179 NE2 HIS 23 30.208 16.037 10.566 1.00 0.00 N ATOM 180 CD2 HIS 23 30.948 14.902 10.276 1.00 0.00 C ATOM 181 CE1 HIS 23 30.634 16.942 9.703 1.00 0.00 C ATOM 182 C HIS 23 34.925 13.978 9.857 1.00 0.00 C ATOM 183 O HIS 23 35.787 13.127 9.653 1.00 0.00 O ATOM 184 N GLY 24 34.548 14.330 11.095 1.00 0.00 N ATOM 185 CA GLY 24 35.148 13.724 12.243 1.00 0.00 C ATOM 186 C GLY 24 36.056 14.721 12.878 1.00 0.00 C ATOM 187 O GLY 24 35.636 15.434 13.788 1.00 0.00 O ATOM 188 N THR 25 37.327 14.800 12.417 1.00 0.00 N ATOM 189 CA THR 25 38.062 16.006 12.674 1.00 0.00 C ATOM 190 CB THR 25 39.397 15.974 12.057 1.00 0.00 C ATOM 191 OG1 THR 25 40.000 17.246 12.250 1.00 0.00 O ATOM 192 CG2 THR 25 39.273 15.664 10.556 1.00 0.00 C ATOM 193 C THR 25 37.136 17.052 12.177 1.00 0.00 C ATOM 194 O THR 25 36.796 17.101 10.997 1.00 0.00 O ATOM 195 N THR 26 36.584 17.796 13.149 1.00 0.00 N ATOM 196 CA THR 26 35.680 18.881 12.966 1.00 0.00 C ATOM 197 CB THR 26 34.233 18.482 12.788 1.00 0.00 C ATOM 198 OG1 THR 26 34.055 17.840 11.534 1.00 0.00 O ATOM 199 CG2 THR 26 33.362 19.753 12.854 1.00 0.00 C ATOM 200 C THR 26 35.864 19.672 14.221 1.00 0.00 C ATOM 201 O THR 26 35.442 20.823 14.333 1.00 0.00 O ATOM 202 N SER 27 36.585 19.056 15.186 1.00 0.00 N ATOM 203 CA SER 27 37.195 19.802 16.248 1.00 0.00 C ATOM 204 CB SER 27 37.906 18.909 17.275 1.00 0.00 C ATOM 205 OG SER 27 38.413 17.755 16.620 1.00 0.00 O ATOM 206 C SER 27 38.202 20.668 15.577 1.00 0.00 C ATOM 207 O SER 27 37.856 21.654 14.928 1.00 0.00 O ATOM 208 N GLY 28 39.483 20.289 15.678 1.00 0.00 N ATOM 209 CA GLY 28 40.433 20.951 14.844 1.00 0.00 C ATOM 210 C GLY 28 40.798 19.985 13.752 1.00 0.00 C ATOM 211 O GLY 28 41.493 19.008 14.021 1.00 0.00 O ATOM 212 N LYS 29 40.346 20.254 12.497 1.00 0.00 N ATOM 213 CA LYS 29 41.187 20.144 11.326 1.00 0.00 C ATOM 214 CB LYS 29 42.538 19.466 11.536 1.00 0.00 C ATOM 215 CG LYS 29 42.543 17.926 11.373 1.00 0.00 C ATOM 216 CD LYS 29 43.812 17.169 11.784 1.00 0.00 C ATOM 217 CE LYS 29 43.976 15.828 11.046 1.00 0.00 C ATOM 218 NZ LYS 29 44.635 14.814 11.907 1.00 0.00 N ATOM 219 C LYS 29 40.578 19.415 10.227 1.00 0.00 C ATOM 220 O LYS 29 41.300 19.096 9.277 1.00 0.00 O ATOM 221 N ARG 30 39.252 19.214 10.341 1.00 0.00 N ATOM 222 CA ARG 30 38.390 18.585 9.387 1.00 0.00 C ATOM 223 CB ARG 30 36.998 19.208 9.168 1.00 0.00 C ATOM 224 CG ARG 30 36.854 20.723 9.330 1.00 0.00 C ATOM 225 CD ARG 30 38.151 21.526 9.204 1.00 0.00 C ATOM 226 NE ARG 30 38.469 21.764 7.769 1.00 0.00 N ATOM 227 CZ ARG 30 39.769 21.705 7.358 1.00 0.00 C ATOM 228 NH1 ARG 30 40.770 21.472 8.248 1.00 0.00 H ATOM 229 NH2 ARG 30 40.103 21.839 6.050 1.00 0.00 H ATOM 230 C ARG 30 39.044 18.352 8.070 1.00 0.00 C ATOM 231 O ARG 30 38.918 19.126 7.123 1.00 0.00 O ATOM 232 N VAL 31 39.846 17.270 8.050 1.00 0.00 N ATOM 233 CA VAL 31 41.084 17.179 7.333 1.00 0.00 C ATOM 234 CB VAL 31 41.782 15.879 7.604 1.00 0.00 C ATOM 235 CG1 VAL 31 40.836 14.740 7.186 1.00 0.00 C ATOM 236 CG2 VAL 31 43.133 15.835 6.869 1.00 0.00 C ATOM 237 C VAL 31 40.857 17.304 5.861 1.00 0.00 C ATOM 238 O VAL 31 39.878 16.785 5.330 1.00 0.00 O ATOM 239 N VAL 32 41.774 17.996 5.147 1.00 0.00 N ATOM 240 CA VAL 32 41.551 18.087 3.733 1.00 0.00 C ATOM 241 CB VAL 32 41.118 19.353 3.293 1.00 0.00 C ATOM 242 CG1 VAL 32 41.249 19.412 1.766 1.00 0.00 C ATOM 243 CG2 VAL 32 39.688 19.591 3.806 1.00 0.00 C ATOM 244 C VAL 32 42.616 17.386 2.955 1.00 0.00 C ATOM 245 O VAL 32 43.793 17.745 2.971 1.00 0.00 O ATOM 246 N TYR 33 42.167 16.278 2.313 1.00 0.00 N ATOM 247 CA TYR 33 42.949 15.112 1.998 1.00 0.00 C ATOM 248 CB TYR 33 42.207 13.860 2.364 1.00 0.00 C ATOM 249 CG TYR 33 43.134 12.942 3.088 1.00 0.00 C ATOM 250 CD1 TYR 33 42.972 12.693 4.433 1.00 0.00 C ATOM 251 CD2 TYR 33 44.158 12.318 2.415 1.00 0.00 C ATOM 252 CE1 TYR 33 43.817 11.841 5.098 1.00 0.00 C ATOM 253 CE2 TYR 33 45.004 11.465 3.076 1.00 0.00 C ATOM 254 CZ TYR 33 44.838 11.222 4.417 1.00 0.00 C ATOM 255 OH TYR 33 45.714 10.340 5.089 1.00 0.00 H ATOM 256 C TYR 33 43.214 15.123 0.534 1.00 0.00 C ATOM 257 O TYR 33 42.331 14.820 -0.269 1.00 0.00 O ATOM 258 N VAL 34 44.448 15.500 0.150 1.00 0.00 N ATOM 259 CA VAL 34 44.763 15.613 -1.241 1.00 0.00 C ATOM 260 CB VAL 34 44.936 17.064 -1.678 1.00 0.00 C ATOM 261 CG1 VAL 34 45.190 17.920 -0.426 1.00 0.00 C ATOM 262 CG2 VAL 34 46.053 17.131 -2.731 1.00 0.00 C ATOM 263 C VAL 34 46.027 14.864 -1.504 1.00 0.00 C ATOM 264 O VAL 34 46.980 14.939 -0.730 1.00 0.00 O ATOM 265 N ASP 35 46.035 14.123 -2.631 1.00 0.00 N ATOM 266 CA ASP 35 47.147 13.333 -3.067 1.00 0.00 C ATOM 267 CB ASP 35 48.237 14.150 -3.697 1.00 0.00 C ATOM 268 CG ASP 35 47.922 14.303 -5.175 1.00 0.00 C ATOM 269 OD1 ASP 35 48.723 14.954 -5.897 1.00 0.00 O ATOM 270 OD2 ASP 35 46.871 13.755 -5.607 1.00 0.00 O ATOM 271 C ASP 35 47.716 12.574 -1.911 1.00 0.00 C ATOM 272 O ASP 35 48.930 12.528 -1.724 1.00 0.00 O ATOM 273 N GLY 36 46.842 11.933 -1.111 1.00 0.00 N ATOM 274 CA GLY 36 47.296 11.032 -0.091 1.00 0.00 C ATOM 275 C GLY 36 48.109 11.799 0.900 1.00 0.00 C ATOM 276 O GLY 36 49.007 11.243 1.531 1.00 0.00 O ATOM 277 N LYS 37 47.830 13.104 1.076 1.00 0.00 N ATOM 278 CA LYS 37 48.552 13.817 2.092 1.00 0.00 C ATOM 279 CB LYS 37 49.674 14.702 1.553 1.00 0.00 C ATOM 280 CG LYS 37 50.519 15.336 2.658 1.00 0.00 C ATOM 281 CD LYS 37 50.673 14.431 3.883 1.00 0.00 C ATOM 282 CE LYS 37 51.897 13.515 3.818 1.00 0.00 C ATOM 283 NZ LYS 37 51.933 12.639 5.010 1.00 0.00 N ATOM 284 C LYS 37 47.579 14.704 2.774 1.00 0.00 C ATOM 285 O LYS 37 46.812 15.429 2.138 1.00 0.00 O ATOM 286 N GLU 38 47.583 14.656 4.114 1.00 0.00 N ATOM 287 CA GLU 38 46.657 15.464 4.841 1.00 0.00 C ATOM 288 CB GLU 38 46.581 15.089 6.329 1.00 0.00 C ATOM 289 CG GLU 38 47.937 15.163 7.030 1.00 0.00 C ATOM 290 CD GLU 38 47.890 14.323 8.300 1.00 0.00 C ATOM 291 OE1 GLU 38 47.615 13.097 8.200 1.00 0.00 O ATOM 292 OE2 GLU 38 48.142 14.897 9.393 1.00 0.00 O ATOM 293 C GLU 38 47.112 16.884 4.724 1.00 0.00 C ATOM 294 O GLU 38 48.247 17.222 5.059 1.00 0.00 O ATOM 295 N GLU 39 46.224 17.756 4.214 1.00 0.00 N ATOM 296 CA GLU 39 46.604 19.106 3.931 1.00 0.00 C ATOM 297 CB GLU 39 45.748 19.727 2.841 1.00 0.00 C ATOM 298 CG GLU 39 46.571 20.271 1.670 1.00 0.00 C ATOM 299 CD GLU 39 47.759 19.342 1.429 1.00 0.00 C ATOM 300 OE1 GLU 39 48.733 19.396 2.226 1.00 0.00 O ATOM 301 OE2 GLU 39 47.715 18.566 0.435 1.00 0.00 O ATOM 302 C GLU 39 46.495 19.887 5.193 1.00 0.00 C ATOM 303 O GLU 39 46.051 19.370 6.215 1.00 0.00 O ATOM 304 N ILE 40 46.951 21.154 5.166 1.00 0.00 N ATOM 305 CA ILE 40 46.952 21.878 6.395 1.00 0.00 C ATOM 306 CB ILE 40 48.314 22.376 6.829 1.00 0.00 C ATOM 307 CG2 ILE 40 49.113 22.695 5.556 1.00 0.00 C ATOM 308 CG1 ILE 40 48.171 23.565 7.798 1.00 0.00 C ATOM 309 CD1 ILE 40 47.858 23.141 9.231 1.00 0.00 C ATOM 310 C ILE 40 46.032 23.085 6.266 1.00 0.00 C ATOM 311 O ILE 40 46.103 23.787 5.262 1.00 0.00 O ATOM 312 N ARG 41 45.118 23.355 7.250 1.00 0.00 N ATOM 313 CA ARG 41 43.953 24.121 6.855 1.00 0.00 C ATOM 314 CB ARG 41 42.557 23.427 7.006 1.00 0.00 C ATOM 315 CG ARG 41 41.447 24.455 7.291 1.00 0.00 C ATOM 316 CD ARG 41 40.650 24.243 8.587 1.00 0.00 C ATOM 317 NE ARG 41 39.244 24.594 8.275 1.00 0.00 N ATOM 318 CZ ARG 41 38.210 24.496 9.152 1.00 0.00 C ATOM 319 NH1 ARG 41 36.950 24.873 8.775 1.00 0.00 H ATOM 320 NH2 ARG 41 38.432 24.081 10.426 1.00 0.00 H ATOM 321 C ARG 41 43.909 25.590 7.146 1.00 0.00 C ATOM 322 O ARG 41 43.749 26.397 6.232 1.00 0.00 O ATOM 323 N LYS 42 44.019 25.981 8.413 1.00 0.00 N ATOM 324 CA LYS 42 43.413 27.147 8.993 1.00 0.00 C ATOM 325 CB LYS 42 43.108 28.487 8.303 1.00 0.00 C ATOM 326 CG LYS 42 42.549 29.539 9.261 1.00 0.00 C ATOM 327 CD LYS 42 43.339 30.853 9.286 1.00 0.00 C ATOM 328 CE LYS 42 43.333 31.616 7.958 1.00 0.00 C ATOM 329 NZ LYS 42 41.976 32.132 7.681 1.00 0.00 N ATOM 330 C LYS 42 42.011 26.808 9.322 1.00 0.00 C ATOM 331 O LYS 42 41.118 26.928 8.485 1.00 0.00 O ATOM 332 N GLU 43 41.788 26.391 10.570 1.00 0.00 N ATOM 333 CA GLU 43 40.543 25.891 11.037 1.00 0.00 C ATOM 334 CB GLU 43 40.873 24.750 11.975 1.00 0.00 C ATOM 335 CG GLU 43 41.838 25.140 13.097 1.00 0.00 C ATOM 336 CD GLU 43 42.746 23.943 13.321 1.00 0.00 C ATOM 337 OE1 GLU 43 42.213 22.859 13.679 1.00 0.00 O ATOM 338 OE2 GLU 43 43.982 24.090 13.127 1.00 0.00 O ATOM 339 C GLU 43 39.895 27.018 11.762 1.00 0.00 C ATOM 340 O GLU 43 39.599 26.952 12.956 1.00 0.00 O ATOM 341 N TRP 44 39.682 28.116 11.017 1.00 0.00 N ATOM 342 CA TRP 44 39.188 29.316 11.606 1.00 0.00 C ATOM 343 CB TRP 44 39.453 30.532 10.724 1.00 0.00 C ATOM 344 CG TRP 44 40.328 31.607 11.327 1.00 0.00 C ATOM 345 CD2 TRP 44 40.350 31.960 12.720 1.00 0.00 C ATOM 346 CD1 TRP 44 41.214 32.439 10.707 1.00 0.00 C ATOM 347 NE1 TRP 44 41.789 33.286 11.624 1.00 0.00 N ATOM 348 CE2 TRP 44 41.264 33.003 12.867 1.00 0.00 C ATOM 349 CE3 TRP 44 39.663 31.461 13.790 1.00 0.00 C ATOM 350 CZ2 TRP 44 41.503 33.563 14.089 1.00 0.00 C ATOM 351 CZ3 TRP 44 39.909 32.026 15.024 1.00 0.00 C ATOM 352 CH2 TRP 44 40.811 33.059 15.170 1.00 0.00 H ATOM 353 C TRP 44 37.726 29.141 11.822 1.00 0.00 C ATOM 354 O TRP 44 37.021 28.579 10.985 1.00 0.00 O ATOM 355 N MET 45 37.233 29.592 12.989 1.00 0.00 N ATOM 356 CA MET 45 35.852 29.345 13.266 1.00 0.00 C ATOM 357 CB MET 45 35.621 28.522 14.547 1.00 0.00 C ATOM 358 CG MET 45 35.852 29.269 15.862 1.00 0.00 C ATOM 359 SD MET 45 37.489 28.987 16.607 1.00 0.00 S ATOM 360 CE MET 45 37.832 27.441 15.710 1.00 0.00 C ATOM 361 C MET 45 35.186 30.676 13.412 1.00 0.00 C ATOM 362 O MET 45 35.540 31.485 14.269 1.00 0.00 O ATOM 363 N PHE 46 34.194 30.933 12.549 1.00 0.00 N ATOM 364 CA PHE 46 33.439 32.140 12.627 1.00 0.00 C ATOM 365 CB PHE 46 33.021 32.572 11.209 1.00 0.00 C ATOM 366 CG PHE 46 33.478 33.966 10.966 1.00 0.00 C ATOM 367 CD1 PHE 46 32.969 34.689 9.912 1.00 0.00 C ATOM 368 CD2 PHE 46 34.419 34.550 11.781 1.00 0.00 C ATOM 369 CE1 PHE 46 33.384 35.978 9.678 1.00 0.00 C ATOM 370 CE2 PHE 46 34.838 35.839 11.552 1.00 0.00 C ATOM 371 CZ PHE 46 34.320 36.556 10.502 1.00 0.00 C ATOM 372 C PHE 46 32.250 31.773 13.442 1.00 0.00 C ATOM 373 O PHE 46 32.135 30.629 13.878 1.00 0.00 O ATOM 374 N LYS 47 31.344 32.733 13.696 1.00 0.00 N ATOM 375 CA LYS 47 30.239 32.397 14.536 1.00 0.00 C ATOM 376 CB LYS 47 29.385 33.600 14.977 1.00 0.00 C ATOM 377 CG LYS 47 29.375 33.834 16.491 1.00 0.00 C ATOM 378 CD LYS 47 30.405 34.862 16.959 1.00 0.00 C ATOM 379 CE LYS 47 31.722 34.252 17.439 1.00 0.00 C ATOM 380 NZ LYS 47 31.528 32.811 17.712 1.00 0.00 N ATOM 381 C LYS 47 29.339 31.494 13.746 1.00 0.00 C ATOM 382 O LYS 47 28.641 30.649 14.308 1.00 0.00 O ATOM 383 N LEU 48 29.334 31.660 12.407 1.00 0.00 N ATOM 384 CA LEU 48 28.439 30.934 11.549 1.00 0.00 C ATOM 385 CB LEU 48 28.033 31.743 10.282 1.00 0.00 C ATOM 386 CG LEU 48 26.554 31.516 9.925 1.00 0.00 C ATOM 387 CD1 LEU 48 26.387 30.404 8.886 1.00 0.00 C ATOM 388 CD2 LEU 48 25.718 31.257 11.189 1.00 0.00 C ATOM 389 C LEU 48 29.111 29.666 11.114 1.00 0.00 C ATOM 390 O LEU 48 28.933 28.614 11.722 1.00 0.00 O ATOM 391 N VAL 49 29.891 29.724 10.017 1.00 0.00 N ATOM 392 CA VAL 49 30.382 28.523 9.398 1.00 0.00 C ATOM 393 CB VAL 49 30.067 28.532 7.935 1.00 0.00 C ATOM 394 CG1 VAL 49 28.556 28.773 7.779 1.00 0.00 C ATOM 395 CG2 VAL 49 30.948 29.606 7.273 1.00 0.00 C ATOM 396 C VAL 49 31.848 28.409 9.696 1.00 0.00 C ATOM 397 O VAL 49 32.290 28.802 10.778 1.00 0.00 O ATOM 398 N GLY 50 32.641 27.833 8.768 1.00 0.00 N ATOM 399 CA GLY 50 33.976 27.441 9.125 1.00 0.00 C ATOM 400 C GLY 50 34.921 28.453 8.580 1.00 0.00 C ATOM 401 O GLY 50 35.164 29.518 9.146 1.00 0.00 O ATOM 402 N LYS 51 35.468 28.060 7.428 1.00 0.00 N ATOM 403 CA LYS 51 36.487 28.614 6.602 1.00 0.00 C ATOM 404 CB LYS 51 36.700 30.125 6.415 1.00 0.00 C ATOM 405 CG LYS 51 36.103 30.685 5.122 1.00 0.00 C ATOM 406 CD LYS 51 34.780 31.424 5.324 1.00 0.00 C ATOM 407 CE LYS 51 34.516 32.468 4.240 1.00 0.00 C ATOM 408 NZ LYS 51 34.760 31.873 2.907 1.00 0.00 N ATOM 409 C LYS 51 37.768 27.886 6.770 1.00 0.00 C ATOM 410 O LYS 51 38.540 28.122 7.698 1.00 0.00 O ATOM 411 N GLU 52 37.992 26.944 5.829 1.00 0.00 N ATOM 412 CA GLU 52 39.144 26.097 5.819 1.00 0.00 C ATOM 413 CB GLU 52 38.777 24.646 5.504 1.00 0.00 C ATOM 414 CG GLU 52 38.869 24.375 4.013 1.00 0.00 C ATOM 415 CD GLU 52 40.036 23.441 3.693 1.00 0.00 C ATOM 416 OE1 GLU 52 41.140 23.641 4.268 1.00 0.00 O ATOM 417 OE2 GLU 52 39.837 22.506 2.873 1.00 0.00 O ATOM 418 C GLU 52 40.115 26.672 4.829 1.00 0.00 C ATOM 419 O GLU 52 39.717 26.974 3.706 1.00 0.00 O ATOM 420 N THR 53 41.405 26.915 5.204 1.00 0.00 N ATOM 421 CA THR 53 42.090 27.796 4.296 1.00 0.00 C ATOM 422 CB THR 53 42.387 29.280 4.681 1.00 0.00 C ATOM 423 OG1 THR 53 42.583 30.038 3.496 1.00 0.00 O ATOM 424 CG2 THR 53 43.586 29.496 5.629 1.00 0.00 C ATOM 425 C THR 53 43.400 27.352 3.680 1.00 0.00 C ATOM 426 O THR 53 44.325 28.127 3.439 1.00 0.00 O ATOM 427 N PHE 54 43.516 26.089 3.328 1.00 0.00 N ATOM 428 CA PHE 54 44.799 25.519 3.078 1.00 0.00 C ATOM 429 CB PHE 54 44.487 24.028 3.071 1.00 0.00 C ATOM 430 CG PHE 54 43.776 23.589 1.836 1.00 0.00 C ATOM 431 CD1 PHE 54 42.469 23.152 1.906 1.00 0.00 C ATOM 432 CD2 PHE 54 44.419 23.574 0.623 1.00 0.00 C ATOM 433 CE1 PHE 54 41.797 22.725 0.784 1.00 0.00 C ATOM 434 CE2 PHE 54 43.750 23.144 -0.498 1.00 0.00 C ATOM 435 CZ PHE 54 42.443 22.724 -0.427 1.00 0.00 C ATOM 436 C PHE 54 45.482 26.097 1.881 1.00 0.00 C ATOM 437 O PHE 54 44.880 26.813 1.087 1.00 0.00 O ATOM 438 N TYR 55 46.807 25.858 1.765 1.00 0.00 N ATOM 439 CA TYR 55 47.536 26.442 0.681 1.00 0.00 C ATOM 440 CB TYR 55 48.595 27.483 1.106 1.00 0.00 C ATOM 441 CG TYR 55 49.009 28.463 0.066 1.00 0.00 C ATOM 442 CD1 TYR 55 49.992 28.171 -0.849 1.00 0.00 C ATOM 443 CD2 TYR 55 48.431 29.713 0.051 1.00 0.00 C ATOM 444 CE1 TYR 55 50.366 29.111 -1.783 1.00 0.00 C ATOM 445 CE2 TYR 55 48.801 30.653 -0.879 1.00 0.00 C ATOM 446 CZ TYR 55 49.771 30.350 -1.802 1.00 0.00 C ATOM 447 OH TYR 55 50.159 31.309 -2.760 1.00 0.00 H ATOM 448 C TYR 55 48.186 25.344 -0.095 1.00 0.00 C ATOM 449 O TYR 55 48.978 24.566 0.436 1.00 0.00 O ATOM 450 N VAL 56 47.817 25.241 -1.388 1.00 0.00 N ATOM 451 CA VAL 56 48.221 24.136 -2.207 1.00 0.00 C ATOM 452 CB VAL 56 47.063 23.443 -2.855 1.00 0.00 C ATOM 453 CG1 VAL 56 46.424 22.499 -1.823 1.00 0.00 C ATOM 454 CG2 VAL 56 46.092 24.511 -3.385 1.00 0.00 C ATOM 455 C VAL 56 49.070 24.668 -3.310 1.00 0.00 C ATOM 456 O VAL 56 48.571 25.256 -4.271 1.00 0.00 O ATOM 457 N GLY 57 50.392 24.445 -3.187 1.00 0.00 N ATOM 458 CA GLY 57 51.333 24.853 -4.183 1.00 0.00 C ATOM 459 C GLY 57 51.082 26.299 -4.461 1.00 0.00 C ATOM 460 O GLY 57 50.718 27.059 -3.566 1.00 0.00 O ATOM 461 N ALA 58 51.268 26.709 -5.729 1.00 0.00 N ATOM 462 CA ALA 58 51.169 28.093 -6.086 1.00 0.00 C ATOM 463 CB ALA 58 51.441 28.332 -7.560 1.00 0.00 C ATOM 464 C ALA 58 49.777 28.580 -5.767 1.00 0.00 C ATOM 465 O ALA 58 49.609 29.735 -5.382 1.00 0.00 O ATOM 466 N ALA 59 48.728 27.735 -5.933 1.00 0.00 N ATOM 467 CA ALA 59 47.393 28.281 -5.912 1.00 0.00 C ATOM 468 CB ALA 59 46.356 27.500 -6.735 1.00 0.00 C ATOM 469 C ALA 59 46.887 28.467 -4.516 1.00 0.00 C ATOM 470 O ALA 59 47.453 27.962 -3.547 1.00 0.00 O ATOM 471 N LYS 60 45.789 29.253 -4.419 1.00 0.00 N ATOM 472 CA LYS 60 45.182 29.636 -3.182 1.00 0.00 C ATOM 473 CB LYS 60 45.072 31.184 -3.046 1.00 0.00 C ATOM 474 CG LYS 60 44.736 31.699 -1.653 1.00 0.00 C ATOM 475 CD LYS 60 45.949 31.715 -0.731 1.00 0.00 C ATOM 476 CE LYS 60 45.680 32.394 0.607 1.00 0.00 C ATOM 477 NZ LYS 60 46.948 32.516 1.360 1.00 0.00 N ATOM 478 C LYS 60 43.818 29.026 -3.168 1.00 0.00 C ATOM 479 O LYS 60 42.917 29.510 -3.851 1.00 0.00 O ATOM 480 N THR 61 43.649 27.916 -2.411 1.00 0.00 N ATOM 481 CA THR 61 42.435 27.156 -2.507 1.00 0.00 C ATOM 482 CB THR 61 42.600 25.875 -3.273 1.00 0.00 C ATOM 483 OG1 THR 61 43.414 24.980 -2.537 1.00 0.00 O ATOM 484 CG2 THR 61 43.270 26.179 -4.622 1.00 0.00 C ATOM 485 C THR 61 41.963 26.806 -1.130 1.00 0.00 C ATOM 486 O THR 61 42.756 26.494 -0.242 1.00 0.00 O ATOM 487 N LYS 62 40.637 26.862 -0.908 1.00 0.00 N ATOM 488 CA LYS 62 40.110 26.735 0.424 1.00 0.00 C ATOM 489 CB LYS 62 39.993 28.108 1.047 1.00 0.00 C ATOM 490 CG LYS 62 40.507 29.277 0.200 1.00 0.00 C ATOM 491 CD LYS 62 40.709 30.556 1.027 1.00 0.00 C ATOM 492 CE LYS 62 41.252 31.751 0.239 1.00 0.00 C ATOM 493 NZ LYS 62 41.812 32.751 1.177 1.00 0.00 N ATOM 494 C LYS 62 38.761 26.109 0.297 1.00 0.00 C ATOM 495 O LYS 62 38.098 26.221 -0.732 1.00 0.00 O ATOM 496 N ALA 63 38.329 25.401 1.353 1.00 0.00 N ATOM 497 CA ALA 63 37.057 24.744 1.305 1.00 0.00 C ATOM 498 CB ALA 63 37.124 23.345 1.909 1.00 0.00 C ATOM 499 C ALA 63 36.128 25.582 2.119 1.00 0.00 C ATOM 500 O ALA 63 36.356 25.818 3.306 1.00 0.00 O ATOM 501 N THR 64 35.057 26.083 1.478 1.00 0.00 N ATOM 502 CA THR 64 34.132 26.931 2.165 1.00 0.00 C ATOM 503 CB THR 64 33.434 27.925 1.226 1.00 0.00 C ATOM 504 OG1 THR 64 33.314 27.345 -0.065 1.00 0.00 O ATOM 505 CG2 THR 64 34.286 29.204 1.149 1.00 0.00 C ATOM 506 C THR 64 33.102 26.051 2.784 1.00 0.00 C ATOM 507 O THR 64 32.520 25.197 2.124 1.00 0.00 O ATOM 508 N ILE 65 32.859 26.222 4.091 1.00 0.00 N ATOM 509 CA ILE 65 31.956 25.350 4.775 1.00 0.00 C ATOM 510 CB ILE 65 32.635 24.700 5.924 1.00 0.00 C ATOM 511 CG2 ILE 65 33.511 23.580 5.351 1.00 0.00 C ATOM 512 CG1 ILE 65 33.484 25.728 6.684 1.00 0.00 C ATOM 513 CD1 ILE 65 34.976 25.418 6.580 1.00 0.00 C ATOM 514 C ILE 65 30.861 26.225 5.272 1.00 0.00 C ATOM 515 O ILE 65 31.133 27.329 5.732 1.00 0.00 O ATOM 516 N ASN 66 29.597 25.776 5.151 1.00 0.00 N ATOM 517 CA ASN 66 28.506 26.614 5.555 1.00 0.00 C ATOM 518 CB ASN 66 27.697 27.147 4.360 1.00 0.00 C ATOM 519 CG ASN 66 26.830 28.311 4.832 1.00 0.00 C ATOM 520 OD1 ASN 66 25.607 28.205 4.909 1.00 0.00 O ATOM 521 ND2 ASN 66 27.471 29.465 5.146 1.00 0.00 N ATOM 522 C ASN 66 27.604 25.788 6.423 1.00 0.00 C ATOM 523 O ASN 66 27.399 24.602 6.172 1.00 0.00 O ATOM 524 N ILE 67 27.063 26.396 7.498 1.00 0.00 N ATOM 525 CA ILE 67 26.292 25.647 8.444 1.00 0.00 C ATOM 526 CB ILE 67 26.747 25.835 9.856 1.00 0.00 C ATOM 527 CG2 ILE 67 28.280 25.711 9.875 1.00 0.00 C ATOM 528 CG1 ILE 67 26.225 27.174 10.405 1.00 0.00 C ATOM 529 CD1 ILE 67 24.868 27.070 11.101 1.00 0.00 C ATOM 530 C ILE 67 24.857 26.064 8.303 1.00 0.00 C ATOM 531 O ILE 67 24.549 27.251 8.192 1.00 0.00 O ATOM 532 N ASP 68 23.934 25.075 8.262 1.00 0.00 N ATOM 533 CA ASP 68 22.558 25.382 7.984 1.00 0.00 C ATOM 534 CB ASP 68 22.082 24.949 6.584 1.00 0.00 C ATOM 535 CG ASP 68 21.959 26.202 5.721 1.00 0.00 C ATOM 536 OD1 ASP 68 20.842 26.783 5.655 1.00 0.00 O ATOM 537 OD2 ASP 68 22.987 26.588 5.105 1.00 0.00 O ATOM 538 C ASP 68 21.700 24.635 8.936 1.00 0.00 C ATOM 539 O ASP 68 21.647 23.410 8.840 1.00 0.00 O ATOM 540 N ALA 69 21.010 25.368 9.848 1.00 0.00 N ATOM 541 CA ALA 69 20.223 24.777 10.900 1.00 0.00 C ATOM 542 CB ALA 69 20.870 23.509 11.427 1.00 0.00 C ATOM 543 C ALA 69 20.251 25.737 12.052 1.00 0.00 C ATOM 544 O ALA 69 21.238 26.444 12.239 1.00 0.00 O ATOM 545 N ILE 70 19.187 25.752 12.887 1.00 0.00 N ATOM 546 CA ILE 70 19.348 26.220 14.240 1.00 0.00 C ATOM 547 CB ILE 70 18.247 25.804 15.143 1.00 0.00 C ATOM 548 CG2 ILE 70 17.686 24.443 14.681 1.00 0.00 C ATOM 549 CG1 ILE 70 18.711 25.849 16.612 1.00 0.00 C ATOM 550 CD1 ILE 70 17.575 25.773 17.636 1.00 0.00 C ATOM 551 C ILE 70 20.511 25.404 14.734 1.00 0.00 C ATOM 552 O ILE 70 20.403 24.196 14.930 1.00 0.00 O ATOM 553 N SER 71 21.672 26.033 14.939 1.00 0.00 N ATOM 554 CA SER 71 22.824 25.291 15.346 1.00 0.00 C ATOM 555 CB SER 71 22.644 24.426 16.591 1.00 0.00 C ATOM 556 OG SER 71 23.909 23.986 17.053 1.00 0.00 O ATOM 557 C SER 71 23.399 24.513 14.196 1.00 0.00 C ATOM 558 O SER 71 23.479 25.016 13.077 1.00 0.00 O ATOM 559 N GLY 72 23.884 23.282 14.457 1.00 0.00 N ATOM 560 CA GLY 72 24.879 22.739 13.578 1.00 0.00 C ATOM 561 C GLY 72 24.299 21.742 12.669 1.00 0.00 C ATOM 562 O GLY 72 25.031 21.172 11.860 1.00 0.00 O ATOM 563 N PHE 73 22.982 21.529 12.824 1.00 0.00 N ATOM 564 CA PHE 73 22.245 20.400 12.345 1.00 0.00 C ATOM 565 CB PHE 73 20.791 20.706 12.092 1.00 0.00 C ATOM 566 CG PHE 73 19.972 19.666 12.752 1.00 0.00 C ATOM 567 CD1 PHE 73 20.362 19.115 13.951 1.00 0.00 C ATOM 568 CD2 PHE 73 18.806 19.256 12.157 1.00 0.00 C ATOM 569 CE1 PHE 73 19.583 18.155 14.549 1.00 0.00 C ATOM 570 CE2 PHE 73 18.024 18.296 12.751 1.00 0.00 C ATOM 571 CZ PHE 73 18.415 17.748 13.948 1.00 0.00 C ATOM 572 C PHE 73 22.820 19.840 11.084 1.00 0.00 C ATOM 573 O PHE 73 23.127 18.650 11.020 1.00 0.00 O ATOM 574 N ALA 74 23.010 20.685 10.050 1.00 0.00 N ATOM 575 CA ALA 74 23.608 20.167 8.854 1.00 0.00 C ATOM 576 CB ALA 74 22.549 19.884 7.742 1.00 0.00 C ATOM 577 C ALA 74 24.651 21.123 8.392 1.00 0.00 C ATOM 578 O ALA 74 24.570 22.324 8.639 1.00 0.00 O ATOM 579 N TYR 75 25.699 20.577 7.752 1.00 0.00 N ATOM 580 CA TYR 75 26.840 21.359 7.384 1.00 0.00 C ATOM 581 CB TYR 75 28.056 21.079 8.294 1.00 0.00 C ATOM 582 CG TYR 75 29.479 21.255 7.893 1.00 0.00 C ATOM 583 CD1 TYR 75 29.941 22.129 6.942 1.00 0.00 C ATOM 584 CD2 TYR 75 30.377 20.481 8.594 1.00 0.00 C ATOM 585 CE1 TYR 75 31.296 22.187 6.702 1.00 0.00 C ATOM 586 CE2 TYR 75 31.724 20.536 8.362 1.00 0.00 C ATOM 587 CZ TYR 75 32.182 21.400 7.402 1.00 0.00 C ATOM 588 OH TYR 75 33.566 21.472 7.147 1.00 0.00 H ATOM 589 C TYR 75 27.193 20.936 5.997 1.00 0.00 C ATOM 590 O TYR 75 27.153 19.749 5.681 1.00 0.00 O ATOM 591 N GLU 76 27.522 21.900 5.122 1.00 0.00 N ATOM 592 CA GLU 76 27.788 21.553 3.755 1.00 0.00 C ATOM 593 CB GLU 76 26.718 22.097 2.805 1.00 0.00 C ATOM 594 CG GLU 76 27.276 22.763 1.547 1.00 0.00 C ATOM 595 CD GLU 76 27.291 21.738 0.425 1.00 0.00 C ATOM 596 OE1 GLU 76 27.823 22.072 -0.667 1.00 0.00 O ATOM 597 OE2 GLU 76 26.765 20.613 0.642 1.00 0.00 O ATOM 598 C GLU 76 29.088 22.191 3.409 1.00 0.00 C ATOM 599 O GLU 76 29.359 23.321 3.811 1.00 0.00 O ATOM 600 N TYR 77 29.944 21.465 2.670 1.00 0.00 N ATOM 601 CA TYR 77 31.271 21.951 2.450 1.00 0.00 C ATOM 602 CB TYR 77 32.322 21.008 3.040 1.00 0.00 C ATOM 603 CG TYR 77 31.674 19.825 3.677 1.00 0.00 C ATOM 604 CD1 TYR 77 31.603 19.747 5.046 1.00 0.00 C ATOM 605 CD2 TYR 77 31.155 18.791 2.932 1.00 0.00 C ATOM 606 CE1 TYR 77 31.025 18.674 5.679 1.00 0.00 C ATOM 607 CE2 TYR 77 30.574 17.710 3.558 1.00 0.00 C ATOM 608 CZ TYR 77 30.507 17.650 4.930 1.00 0.00 C ATOM 609 OH TYR 77 29.913 16.543 5.576 1.00 0.00 H ATOM 610 C TYR 77 31.482 22.057 0.977 1.00 0.00 C ATOM 611 O TYR 77 31.258 21.102 0.234 1.00 0.00 O ATOM 612 N THR 78 31.905 23.250 0.517 1.00 0.00 N ATOM 613 CA THR 78 32.067 23.476 -0.882 1.00 0.00 C ATOM 614 CB THR 78 31.111 24.525 -1.446 1.00 0.00 C ATOM 615 OG1 THR 78 31.362 25.793 -0.867 1.00 0.00 O ATOM 616 CG2 THR 78 29.672 24.084 -1.138 1.00 0.00 C ATOM 617 C THR 78 33.491 23.843 -1.145 1.00 0.00 C ATOM 618 O THR 78 34.033 24.764 -0.536 1.00 0.00 O ATOM 619 N LEU 79 34.135 23.083 -2.057 1.00 0.00 N ATOM 620 CA LEU 79 35.535 23.224 -2.350 1.00 0.00 C ATOM 621 CB LEU 79 36.091 21.981 -3.032 1.00 0.00 C ATOM 622 CG LEU 79 35.468 20.671 -2.514 1.00 0.00 C ATOM 623 CD1 LEU 79 35.471 20.613 -0.978 1.00 0.00 C ATOM 624 CD2 LEU 79 34.076 20.434 -3.118 1.00 0.00 C ATOM 625 C LEU 79 35.655 24.363 -3.314 1.00 0.00 C ATOM 626 O LEU 79 34.867 24.478 -4.252 1.00 0.00 O ATOM 627 N GLU 80 36.643 25.252 -3.089 1.00 0.00 N ATOM 628 CA GLU 80 36.759 26.419 -3.915 1.00 0.00 C ATOM 629 CB GLU 80 36.277 27.690 -3.189 1.00 0.00 C ATOM 630 CG GLU 80 34.861 27.572 -2.609 1.00 0.00 C ATOM 631 CD GLU 80 33.874 28.165 -3.604 1.00 0.00 C ATOM 632 OE1 GLU 80 34.237 28.293 -4.804 1.00 0.00 O ATOM 633 OE2 GLU 80 32.741 28.505 -3.171 1.00 0.00 O ATOM 634 C GLU 80 38.198 26.565 -4.291 1.00 0.00 C ATOM 635 O GLU 80 39.077 26.569 -3.429 1.00 0.00 O ATOM 636 N ILE 81 38.470 26.667 -5.609 1.00 0.00 N ATOM 637 CA ILE 81 39.819 26.839 -6.067 1.00 0.00 C ATOM 638 CB ILE 81 40.346 25.633 -6.821 1.00 0.00 C ATOM 639 CG2 ILE 81 40.470 24.469 -5.822 1.00 0.00 C ATOM 640 CG1 ILE 81 39.434 25.308 -8.015 1.00 0.00 C ATOM 641 CD1 ILE 81 39.883 24.090 -8.821 1.00 0.00 C ATOM 642 C ILE 81 39.860 28.058 -6.930 1.00 0.00 C ATOM 643 O ILE 81 39.148 28.156 -7.928 1.00 0.00 O ATOM 644 N ASN 82 40.705 29.033 -6.531 1.00 0.00 N ATOM 645 CA ASN 82 40.894 30.243 -7.279 1.00 0.00 C ATOM 646 CB ASN 82 41.619 29.975 -8.601 1.00 0.00 C ATOM 647 CG ASN 82 43.089 30.322 -8.428 1.00 0.00 C ATOM 648 OD1 ASN 82 43.440 31.469 -8.157 1.00 0.00 O ATOM 649 ND2 ASN 82 43.973 29.305 -8.607 1.00 0.00 N ATOM 650 C ASN 82 39.562 30.864 -7.559 1.00 0.00 C ATOM 651 O ASN 82 39.322 31.370 -8.655 1.00 0.00 O ATOM 652 N GLY 83 38.665 30.873 -6.553 1.00 0.00 N ATOM 653 CA GLY 83 37.455 31.633 -6.659 1.00 0.00 C ATOM 654 C GLY 83 36.377 30.776 -7.225 1.00 0.00 C ATOM 655 O GLY 83 35.200 31.127 -7.159 1.00 0.00 O ATOM 656 N LYS 84 36.757 29.630 -7.812 1.00 0.00 N ATOM 657 CA LYS 84 35.834 28.844 -8.566 1.00 0.00 C ATOM 658 CB LYS 84 36.560 28.220 -9.769 1.00 0.00 C ATOM 659 CG LYS 84 36.151 28.806 -11.124 1.00 0.00 C ATOM 660 CD LYS 84 34.637 28.788 -11.330 1.00 0.00 C ATOM 661 CE LYS 84 33.956 27.529 -10.785 1.00 0.00 C ATOM 662 NZ LYS 84 33.871 26.503 -11.847 1.00 0.00 N ATOM 663 C LYS 84 35.255 27.812 -7.659 1.00 0.00 C ATOM 664 O LYS 84 35.955 27.219 -6.840 1.00 0.00 O ATOM 665 N SER 85 33.928 27.607 -7.771 1.00 0.00 N ATOM 666 CA SER 85 33.274 26.658 -6.925 1.00 0.00 C ATOM 667 CB SER 85 31.773 26.913 -6.815 1.00 0.00 C ATOM 668 OG SER 85 31.456 28.138 -7.456 1.00 0.00 O ATOM 669 C SER 85 33.472 25.317 -7.540 1.00 0.00 C ATOM 670 O SER 85 33.519 25.189 -8.761 1.00 0.00 O ATOM 671 N LEU 86 33.621 24.270 -6.708 1.00 0.00 N ATOM 672 CA LEU 86 33.921 22.987 -7.261 1.00 0.00 C ATOM 673 CB LEU 86 35.159 22.386 -6.641 1.00 0.00 C ATOM 674 CG LEU 86 36.364 23.344 -6.708 1.00 0.00 C ATOM 675 CD1 LEU 86 37.287 23.161 -5.493 1.00 0.00 C ATOM 676 CD2 LEU 86 37.098 23.238 -8.048 1.00 0.00 C ATOM 677 C LEU 86 32.765 22.101 -7.006 1.00 0.00 C ATOM 678 O LEU 86 32.122 22.167 -5.959 1.00 0.00 O ATOM 679 N LYS 87 32.463 21.264 -8.006 1.00 0.00 N ATOM 680 CA LYS 87 31.282 20.470 -7.983 1.00 0.00 C ATOM 681 CB LYS 87 30.937 19.974 -9.392 1.00 0.00 C ATOM 682 CG LYS 87 32.150 19.811 -10.302 1.00 0.00 C ATOM 683 CD LYS 87 32.864 18.468 -10.154 1.00 0.00 C ATOM 684 CE LYS 87 32.730 17.571 -11.387 1.00 0.00 C ATOM 685 NZ LYS 87 32.222 16.238 -10.993 1.00 0.00 N ATOM 686 C LYS 87 31.542 19.302 -7.090 1.00 0.00 C ATOM 687 O LYS 87 32.624 18.718 -7.106 1.00 0.00 O ATOM 688 N LYS 88 30.546 18.949 -6.260 1.00 0.00 N ATOM 689 CA LYS 88 30.731 17.913 -5.289 1.00 0.00 C ATOM 690 CB LYS 88 29.745 18.016 -4.145 1.00 0.00 C ATOM 691 CG LYS 88 30.064 17.088 -2.975 1.00 0.00 C ATOM 692 CD LYS 88 28.840 16.407 -2.356 1.00 0.00 C ATOM 693 CE LYS 88 29.157 15.601 -1.089 1.00 0.00 C ATOM 694 NZ LYS 88 29.326 16.514 0.060 1.00 0.00 N ATOM 695 C LYS 88 30.426 16.619 -5.972 1.00 0.00 C ATOM 696 O LYS 88 29.357 16.460 -6.559 1.00 0.00 O ATOM 697 N TYR 89 31.351 15.645 -5.886 1.00 0.00 N ATOM 698 CA TYR 89 30.989 14.280 -6.147 1.00 0.00 C ATOM 699 CB TYR 89 32.037 13.344 -5.608 1.00 0.00 C ATOM 700 CG TYR 89 31.617 11.970 -5.226 1.00 0.00 C ATOM 701 CD1 TYR 89 31.197 11.046 -6.156 1.00 0.00 C ATOM 702 CD2 TYR 89 31.688 11.609 -3.901 1.00 0.00 C ATOM 703 CE1 TYR 89 30.843 9.779 -5.754 1.00 0.00 C ATOM 704 CE2 TYR 89 31.335 10.346 -3.496 1.00 0.00 C ATOM 705 CZ TYR 89 30.911 9.428 -4.426 1.00 0.00 C ATOM 706 OH TYR 89 30.551 8.130 -4.011 1.00 0.00 H ATOM 707 C TYR 89 29.793 14.077 -5.275 1.00 0.00 C ATOM 708 O TYR 89 29.778 14.478 -4.109 1.00 0.00 O ATOM 709 N MET 90 28.732 13.480 -5.843 1.00 0.00 N ATOM 710 CA MET 90 27.462 13.507 -5.185 1.00 0.00 C ATOM 711 CB MET 90 26.628 14.671 -5.744 1.00 0.00 C ATOM 712 CG MET 90 25.426 15.027 -4.855 1.00 0.00 C ATOM 713 SD MET 90 25.310 16.765 -4.311 1.00 0.00 S ATOM 714 CE MET 90 23.633 16.689 -3.604 1.00 0.00 C ATOM 715 C MET 90 26.803 12.167 -5.478 1.00 0.00 C ATOM 716 O MET 90 27.529 11.287 -6.011 1.00 0.00 O ATOM 717 OXT MET 90 25.595 11.993 -5.160 1.00 0.00 O TER 718 MET 90 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 67.33 60.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 54.61 69.5 118 100.0 118 ARMSMC SURFACE . . . . . . . . 69.94 52.8 108 100.0 108 ARMSMC BURIED . . . . . . . . 63.09 71.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 101.28 17.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 102.36 13.6 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 104.64 15.4 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 92.41 18.2 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 112.68 16.1 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.07 32.7 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 82.49 37.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 84.74 35.9 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 80.74 33.3 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 86.43 31.8 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.61 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 82.61 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 78.75 41.2 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 83.44 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 80.07 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.29 30.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 91.29 30.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 89.01 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 97.87 36.4 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 38.53 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.89 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.89 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0543 CRMSCA SECONDARY STRUCTURE . . 3.33 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.63 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.39 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.94 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.50 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.66 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.54 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.84 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 7.01 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.93 252 100.0 252 CRMSSC SURFACE . . . . . . . . 8.18 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.45 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.90 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.27 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.89 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.03 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.905 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.685 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.620 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.781 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.954 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.804 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.632 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.900 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.484 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.600 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.043 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.741 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.797 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.670 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.421 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.571 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.362 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 36 45 57 86 90 90 DISTCA CA (P) 7.78 40.00 50.00 63.33 95.56 90 DISTCA CA (RMS) 0.70 1.35 1.61 2.28 4.38 DISTCA ALL (N) 46 217 302 428 647 716 716 DISTALL ALL (P) 6.42 30.31 42.18 59.78 90.36 716 DISTALL ALL (RMS) 0.68 1.36 1.75 2.59 4.53 DISTALL END of the results output