####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS174_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS174_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 89 1 - 89 4.82 5.02 LONGEST_CONTINUOUS_SEGMENT: 89 2 - 90 4.95 5.02 LCS_AVERAGE: 98.89 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 60 - 87 1.97 5.21 LCS_AVERAGE: 19.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.97 5.58 LCS_AVERAGE: 8.80 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 89 4 5 7 15 30 37 44 49 59 63 65 68 70 72 77 78 82 84 87 88 LCS_GDT T 2 T 2 4 5 89 4 4 5 9 10 14 22 26 31 47 63 65 70 72 77 77 82 84 87 88 LCS_GDT D 3 D 3 4 8 89 4 4 4 10 20 25 40 48 57 63 65 67 70 72 77 78 82 84 87 88 LCS_GDT L 4 L 4 4 21 89 4 4 4 8 34 43 51 59 62 66 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 5 V 5 8 21 89 5 17 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 6 A 6 8 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 7 V 7 8 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT W 8 W 8 8 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT D 9 D 9 8 21 89 8 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 10 V 10 8 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 11 A 11 8 21 89 7 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT L 12 L 12 8 21 89 4 11 18 35 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT S 13 S 13 6 21 89 4 6 11 21 27 37 49 60 62 66 70 73 75 77 78 80 82 84 87 88 LCS_GDT D 14 D 14 9 21 89 12 27 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 15 G 15 9 21 89 5 23 37 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 16 V 16 9 21 89 7 27 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT H 17 H 17 9 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 18 K 18 9 21 89 3 25 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 19 I 19 9 21 89 5 27 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 20 E 20 9 21 89 7 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT F 21 F 21 9 21 89 8 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 22 E 22 9 21 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT H 23 H 23 9 21 89 7 24 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 24 G 24 5 21 89 3 3 13 34 49 53 59 61 64 67 70 72 75 77 78 80 82 84 87 88 LCS_GDT T 25 T 25 3 5 89 3 3 3 8 11 14 25 39 49 58 62 67 74 76 78 80 82 84 87 88 LCS_GDT T 26 T 26 4 6 89 3 4 4 5 5 5 8 10 11 13 38 47 54 65 75 79 82 84 87 88 LCS_GDT S 27 S 27 4 6 89 3 4 4 5 5 6 7 7 11 19 29 42 51 57 68 76 80 82 87 88 LCS_GDT G 28 G 28 4 6 89 3 4 4 5 5 10 12 19 25 33 46 57 63 71 76 79 82 83 87 88 LCS_GDT K 29 K 29 4 6 89 3 4 4 5 5 5 16 20 31 41 55 61 69 76 78 80 82 84 87 88 LCS_GDT R 30 R 30 4 6 89 3 3 4 5 5 5 8 16 30 37 49 58 65 74 78 80 82 84 87 88 LCS_GDT V 31 V 31 4 6 89 1 3 4 7 8 14 19 33 45 55 69 72 75 76 78 80 82 84 87 88 LCS_GDT V 32 V 32 8 10 89 5 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT Y 33 Y 33 8 10 89 3 24 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 34 V 34 8 10 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT D 35 D 35 8 10 89 5 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 36 G 36 8 10 89 5 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 37 K 37 8 10 89 6 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 38 E 38 8 10 89 8 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 39 E 39 8 10 89 3 24 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 40 I 40 4 10 89 3 4 10 15 33 49 57 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT R 41 R 41 4 10 89 3 8 18 29 37 48 54 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 42 K 42 4 7 89 3 4 5 15 22 30 38 48 54 63 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 43 E 43 5 6 89 3 5 5 8 14 17 23 32 43 46 50 61 70 76 78 80 82 84 87 88 LCS_GDT W 44 W 44 5 6 89 3 5 5 8 18 21 32 42 50 57 69 73 75 77 78 80 82 84 87 88 LCS_GDT M 45 M 45 5 6 89 3 5 10 18 22 30 40 48 57 63 69 73 75 77 78 80 82 84 87 88 LCS_GDT F 46 F 46 5 6 89 3 5 5 11 21 32 42 50 58 66 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 47 K 47 5 6 89 3 5 11 18 27 39 47 58 63 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT L 48 L 48 6 8 89 3 4 6 8 15 24 28 33 37 51 57 68 74 77 78 80 82 84 87 88 LCS_GDT V 49 V 49 6 9 89 3 5 6 19 29 40 53 60 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 50 G 50 6 10 89 3 7 25 43 49 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 51 K 51 6 10 89 3 5 9 41 49 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 52 E 52 6 16 89 3 5 17 27 48 53 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT T 53 T 53 6 16 89 3 11 31 44 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT F 54 F 54 6 16 89 4 11 31 45 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT Y 55 Y 55 6 16 89 4 11 25 43 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT V 56 V 56 6 16 89 5 12 22 37 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 57 G 57 6 16 89 4 10 19 27 42 49 58 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 58 A 58 4 16 89 3 3 5 11 22 31 41 53 61 62 66 70 73 77 78 79 82 84 86 88 LCS_GDT A 59 A 59 4 16 89 3 7 14 21 32 41 52 55 61 64 67 70 73 77 78 79 82 84 86 88 LCS_GDT K 60 K 60 10 28 89 3 9 25 40 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT T 61 T 61 10 28 89 5 22 38 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 62 K 62 10 28 89 4 28 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 63 A 63 10 28 89 5 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT T 64 T 64 10 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 65 I 65 10 28 89 14 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT N 66 N 66 10 28 89 4 24 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 67 I 67 10 28 89 4 24 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT D 68 D 68 10 28 89 8 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 69 A 69 10 28 89 12 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 70 I 70 8 28 89 4 25 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT S 71 S 71 8 28 89 3 12 29 43 49 54 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 72 G 72 8 28 89 3 6 11 18 29 41 54 61 63 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT F 73 F 73 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT A 74 A 74 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT Y 75 Y 75 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 76 E 76 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT Y 77 Y 77 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT T 78 T 78 14 28 89 12 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT L 79 L 79 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT E 80 E 80 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT I 81 I 81 14 28 89 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT N 82 N 82 14 28 89 6 24 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT G 83 G 83 14 28 89 6 24 39 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 84 K 84 14 28 89 9 26 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT S 85 S 85 14 28 89 8 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT L 86 L 86 14 28 89 4 9 23 42 49 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 87 K 87 5 28 89 4 6 12 21 30 45 50 59 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT K 88 K 88 5 16 89 4 8 18 29 43 49 55 61 64 67 70 73 75 77 78 80 82 84 87 88 LCS_GDT Y 89 Y 89 3 12 89 0 3 5 11 15 24 29 31 39 49 56 58 70 73 75 77 81 84 87 88 LCS_GDT M 90 M 90 3 3 89 0 3 3 3 4 5 6 11 12 14 22 25 45 54 60 64 70 71 75 77 LCS_AVERAGE LCS_A: 42.55 ( 8.80 19.96 98.89 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 28 40 48 50 57 59 61 64 67 70 73 75 77 78 80 82 84 87 88 GDT PERCENT_AT 17.78 31.11 44.44 53.33 55.56 63.33 65.56 67.78 71.11 74.44 77.78 81.11 83.33 85.56 86.67 88.89 91.11 93.33 96.67 97.78 GDT RMS_LOCAL 0.37 0.66 0.92 1.12 1.22 1.55 1.67 1.80 2.07 2.40 2.60 3.09 3.22 3.45 3.54 3.82 4.01 4.28 4.68 4.70 GDT RMS_ALL_AT 5.40 5.29 5.27 5.32 5.32 5.32 5.33 5.31 5.26 5.21 5.22 5.15 5.12 5.17 5.15 5.13 5.12 5.09 5.04 5.03 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: F 21 F 21 # possible swapping detected: E 22 E 22 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: Y 55 Y 55 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # possible swapping detected: E 80 E 80 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 8.209 0 0.394 0.954 10.056 10.238 7.619 LGA T 2 T 2 9.582 0 0.087 1.114 13.789 1.905 1.088 LGA D 3 D 3 8.690 0 0.162 1.093 14.240 7.738 3.869 LGA L 4 L 4 4.864 0 0.647 1.354 10.152 43.690 25.179 LGA V 5 V 5 1.696 0 0.635 0.592 6.635 72.976 51.837 LGA A 6 A 6 0.513 0 0.045 0.114 1.039 88.214 88.667 LGA V 7 V 7 0.693 0 0.052 0.061 0.979 92.857 91.837 LGA W 8 W 8 0.545 0 0.096 1.144 6.178 95.238 70.850 LGA D 9 D 9 0.862 0 0.227 1.154 4.337 92.857 74.940 LGA V 10 V 10 0.554 0 0.066 0.131 1.031 95.238 91.905 LGA A 11 A 11 0.848 0 0.395 0.417 2.816 77.738 78.476 LGA L 12 L 12 2.922 0 0.127 0.233 4.821 47.619 56.488 LGA S 13 S 13 5.565 0 0.312 0.603 7.598 30.476 23.730 LGA D 14 D 14 2.213 0 0.260 1.242 5.674 59.405 47.202 LGA G 15 G 15 2.196 0 0.062 0.062 2.321 68.810 68.810 LGA V 16 V 16 1.881 0 0.269 1.074 3.823 67.143 63.061 LGA H 17 H 17 0.541 0 0.482 1.285 4.592 86.190 67.476 LGA K 18 K 18 1.378 0 0.105 1.055 2.465 77.262 74.974 LGA I 19 I 19 1.621 0 0.095 1.236 7.015 86.071 66.131 LGA E 20 E 20 1.091 0 0.099 0.513 4.510 83.690 67.090 LGA F 21 F 21 0.796 0 0.174 1.115 6.328 90.476 62.121 LGA E 22 E 22 0.923 0 0.164 0.677 1.369 85.952 88.571 LGA H 23 H 23 1.918 0 0.654 0.634 5.825 77.143 49.524 LGA G 24 G 24 3.493 0 0.619 0.619 4.854 42.500 42.500 LGA T 25 T 25 8.082 0 0.108 0.169 12.122 4.881 2.789 LGA T 26 T 26 11.017 0 0.556 1.406 13.215 0.357 0.204 LGA S 27 S 27 12.119 0 0.661 0.937 12.712 0.000 0.000 LGA G 28 G 28 11.301 0 0.178 0.178 11.762 0.119 0.119 LGA K 29 K 29 10.571 0 0.195 1.273 12.018 0.000 0.000 LGA R 30 R 30 10.808 0 0.544 1.254 16.165 0.000 0.000 LGA V 31 V 31 8.364 0 0.608 0.612 12.370 12.619 7.347 LGA V 32 V 32 1.067 0 0.509 0.820 3.694 69.762 70.748 LGA Y 33 Y 33 1.592 0 0.137 1.314 8.014 79.286 48.651 LGA V 34 V 34 0.655 0 0.066 1.182 2.843 95.238 83.673 LGA D 35 D 35 1.005 0 0.050 0.887 4.140 83.690 68.333 LGA G 36 G 36 1.045 0 0.109 0.109 1.045 88.214 88.214 LGA K 37 K 37 0.693 0 0.121 0.949 3.072 90.595 79.312 LGA E 38 E 38 0.670 0 0.525 0.694 3.671 74.286 77.460 LGA E 39 E 39 1.401 0 0.134 0.323 4.904 71.667 56.614 LGA I 40 I 40 4.291 0 0.621 0.678 9.986 38.214 22.321 LGA R 41 R 41 5.440 0 0.080 1.230 13.119 20.952 10.952 LGA K 42 K 42 8.780 0 0.152 0.967 9.331 4.762 5.979 LGA E 43 E 43 11.896 0 0.650 1.162 19.195 0.000 0.000 LGA W 44 W 44 9.667 0 0.434 1.002 12.003 2.738 2.517 LGA M 45 M 45 9.487 0 0.195 1.078 10.708 0.595 0.417 LGA F 46 F 46 8.559 0 0.615 1.514 11.645 2.500 2.554 LGA K 47 K 47 8.136 0 0.230 1.186 8.310 5.357 5.556 LGA L 48 L 48 9.911 0 0.098 0.257 16.586 2.024 1.012 LGA V 49 V 49 5.070 0 0.684 1.504 6.608 28.571 29.864 LGA G 50 G 50 3.374 0 0.260 0.260 3.581 50.119 50.119 LGA K 51 K 51 2.981 0 0.197 0.881 13.637 48.571 26.720 LGA E 52 E 52 3.742 0 0.127 0.769 9.686 45.119 24.180 LGA T 53 T 53 2.419 0 0.219 0.519 3.304 59.167 60.612 LGA F 54 F 54 2.319 0 0.040 0.149 4.002 60.952 54.848 LGA Y 55 Y 55 2.745 0 0.047 0.142 3.588 57.143 50.714 LGA V 56 V 56 2.952 0 0.102 0.144 3.592 50.238 55.442 LGA G 57 G 57 4.900 0 0.650 0.650 5.505 31.905 31.905 LGA A 58 A 58 8.376 0 0.405 0.472 9.677 6.071 4.952 LGA A 59 A 59 7.140 0 0.113 0.178 8.754 22.976 18.952 LGA K 60 K 60 2.944 0 0.464 1.134 8.050 53.810 39.788 LGA T 61 T 61 1.508 0 0.098 0.160 2.814 66.905 73.129 LGA K 62 K 62 1.148 0 0.082 0.828 7.164 81.429 56.772 LGA A 63 A 63 0.795 0 0.052 0.065 1.194 92.857 90.571 LGA T 64 T 64 0.463 0 0.124 1.089 2.624 92.857 84.762 LGA I 65 I 65 0.583 0 0.153 0.290 1.137 90.595 94.107 LGA N 66 N 66 1.859 0 0.286 0.975 3.446 77.262 66.369 LGA I 67 I 67 1.607 0 0.125 0.145 1.779 72.857 73.929 LGA D 68 D 68 1.013 0 0.124 0.128 1.960 85.952 80.476 LGA A 69 A 69 1.151 0 0.114 0.121 2.209 81.548 78.190 LGA I 70 I 70 1.648 0 0.491 1.567 3.581 65.595 61.548 LGA S 71 S 71 3.567 0 0.175 0.909 4.750 43.690 41.587 LGA G 72 G 72 5.732 0 0.181 0.181 5.732 29.048 29.048 LGA F 73 F 73 0.898 0 0.673 1.057 8.022 71.667 49.437 LGA A 74 A 74 0.576 0 0.294 0.387 2.008 90.476 85.333 LGA Y 75 Y 75 0.349 0 0.079 0.235 2.072 100.000 87.063 LGA E 76 E 76 0.387 0 0.061 0.844 2.185 95.238 84.021 LGA Y 77 Y 77 0.452 0 0.107 0.120 0.990 92.857 92.063 LGA T 78 T 78 0.827 0 0.103 0.138 0.951 90.476 90.476 LGA L 79 L 79 0.667 0 0.104 0.183 1.509 88.214 86.012 LGA E 80 E 80 0.779 0 0.152 0.917 2.586 90.476 77.354 LGA I 81 I 81 0.810 0 0.021 0.598 1.278 90.476 89.345 LGA N 82 N 82 1.541 0 0.011 0.874 3.575 75.000 67.262 LGA G 83 G 83 1.736 0 0.107 0.107 1.736 75.000 75.000 LGA K 84 K 84 1.305 0 0.079 0.682 4.822 83.810 64.286 LGA S 85 S 85 0.764 0 0.204 0.620 2.171 81.667 76.032 LGA L 86 L 86 3.005 0 0.085 1.458 8.416 57.500 40.417 LGA K 87 K 87 5.975 0 0.042 0.728 12.820 21.548 10.265 LGA K 88 K 88 5.096 0 0.500 1.190 9.148 15.238 33.386 LGA Y 89 Y 89 11.133 0 0.733 1.455 12.634 0.714 0.278 LGA M 90 M 90 15.114 0 0.309 0.944 20.003 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 5.018 4.957 5.860 54.943 48.726 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 61 1.80 60.278 52.676 3.207 LGA_LOCAL RMSD: 1.802 Number of atoms: 61 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.307 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 5.018 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.534231 * X + -0.842381 * Y + 0.070653 * Z + 32.412628 Y_new = 0.588769 * X + 0.310810 * Y + -0.746155 * Z + 16.578281 Z_new = 0.606588 * X + 0.440217 * Y + 0.662012 * Z + -2.816173 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.833925 -0.651761 0.586826 [DEG: 47.7804 -37.3432 33.6226 ] ZXZ: 0.094408 0.847296 0.943012 [DEG: 5.4092 48.5465 54.0306 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS174_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS174_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 61 1.80 52.676 5.02 REMARK ---------------------------------------------------------- MOLECULE T0540TS174_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 29.686 5.559 4.567 1.00 0.00 N ATOM 2 CA MET 1 31.082 6.141 4.236 1.00 0.00 C ATOM 3 CB MET 1 31.886 4.986 3.624 1.00 0.00 C ATOM 4 C MET 1 30.972 7.411 3.333 1.00 0.00 C ATOM 5 O MET 1 31.911 8.163 3.074 1.00 0.00 O ATOM 6 CG MET 1 32.221 3.879 4.626 1.00 0.00 C ATOM 7 SD MET 1 33.232 4.421 6.037 1.00 0.00 S ATOM 8 CE MET 1 34.709 4.782 5.046 1.00 0.00 C ATOM 9 N THR 2 29.782 7.518 2.751 1.00 0.00 N ATOM 10 CA THR 2 29.551 8.662 1.840 1.00 0.00 C ATOM 11 CB THR 2 29.285 8.114 0.405 1.00 0.00 C ATOM 12 C THR 2 28.787 9.709 2.636 1.00 0.00 C ATOM 13 O THR 2 28.895 10.927 2.503 1.00 0.00 O ATOM 14 OG1 THR 2 30.407 7.373 -0.051 1.00 0.00 O ATOM 15 CG2 THR 2 29.030 9.291 -0.551 1.00 0.00 C ATOM 16 N ASP 3 27.928 9.150 3.489 1.00 0.00 N ATOM 17 CA ASP 3 26.996 10.140 4.233 1.00 0.00 C ATOM 18 CB ASP 3 25.840 9.354 4.858 1.00 0.00 C ATOM 19 C ASP 3 27.749 10.927 5.353 1.00 0.00 C ATOM 20 O ASP 3 27.228 11.776 6.075 1.00 0.00 O ATOM 21 CG ASP 3 24.915 8.904 3.736 1.00 0.00 C ATOM 22 OD1 ASP 3 25.068 9.424 2.599 1.00 0.00 O ATOM 23 OD2 ASP 3 24.043 8.034 4.001 1.00 0.00 O ATOM 24 N LEU 4 28.988 10.480 5.544 1.00 0.00 N ATOM 25 CA LEU 4 29.803 11.119 6.600 1.00 0.00 C ATOM 26 CB LEU 4 30.437 10.242 7.659 1.00 0.00 C ATOM 27 C LEU 4 30.908 11.767 5.975 1.00 0.00 C ATOM 28 O LEU 4 31.397 12.764 6.615 1.00 0.00 O ATOM 29 CG LEU 4 29.421 9.453 8.487 1.00 0.00 C ATOM 30 CD1 LEU 4 30.027 8.457 9.474 1.00 0.00 C ATOM 31 CD2 LEU 4 28.500 10.303 9.361 1.00 0.00 C ATOM 32 N VAL 5 31.330 11.411 4.771 1.00 0.00 N ATOM 33 CA VAL 5 32.405 12.000 3.975 1.00 0.00 C ATOM 34 CB VAL 5 33.245 10.805 3.428 1.00 0.00 C ATOM 35 C VAL 5 31.858 12.632 2.617 1.00 0.00 C ATOM 36 O VAL 5 30.771 12.452 2.076 1.00 0.00 O ATOM 37 CG1 VAL 5 33.889 9.957 4.527 1.00 0.00 C ATOM 38 CG2 VAL 5 32.430 9.820 2.587 1.00 0.00 C ATOM 39 N ALA 6 32.733 13.542 2.212 1.00 0.00 N ATOM 40 CA ALA 6 32.594 14.501 1.121 1.00 0.00 C ATOM 41 CB ALA 6 32.361 15.969 1.506 1.00 0.00 C ATOM 42 C ALA 6 33.775 14.148 0.036 1.00 0.00 C ATOM 43 O ALA 6 34.892 13.852 0.443 1.00 0.00 O ATOM 44 N VAL 7 33.492 14.292 -1.251 1.00 0.00 N ATOM 45 CA VAL 7 34.596 14.233 -2.097 1.00 0.00 C ATOM 46 CB VAL 7 34.708 12.832 -2.767 1.00 0.00 C ATOM 47 C VAL 7 34.476 15.323 -3.242 1.00 0.00 C ATOM 48 O VAL 7 33.379 15.448 -3.774 1.00 0.00 O ATOM 49 CG1 VAL 7 35.882 12.713 -3.741 1.00 0.00 C ATOM 50 CG2 VAL 7 34.901 11.691 -1.766 1.00 0.00 C ATOM 51 N TRP 8 35.544 16.009 -3.626 1.00 0.00 N ATOM 52 CA TRP 8 35.367 16.762 -4.827 1.00 0.00 C ATOM 53 CB TRP 8 35.565 18.108 -4.111 1.00 0.00 C ATOM 54 C TRP 8 36.668 16.861 -5.672 1.00 0.00 C ATOM 55 O TRP 8 37.866 16.940 -5.343 1.00 0.00 O ATOM 56 CG TRP 8 34.472 18.446 -3.126 1.00 0.00 C ATOM 57 CD1 TRP 8 34.441 18.272 -1.772 1.00 0.00 C ATOM 58 CD2 TRP 8 33.198 19.037 -3.418 1.00 0.00 C ATOM 59 NE1 TRP 8 33.324 18.678 -1.204 1.00 0.00 N ATOM 60 CE2 TRP 8 32.505 19.170 -2.187 1.00 0.00 C ATOM 61 CE3 TRP 8 32.570 19.475 -4.604 1.00 0.00 C ATOM 62 CZ2 TRP 8 31.199 19.725 -2.102 1.00 0.00 C ATOM 63 CZ3 TRP 8 31.259 20.033 -4.529 1.00 0.00 C ATOM 64 CH2 TRP 8 30.596 20.148 -3.280 1.00 0.00 C ATOM 65 N ASP 9 36.263 16.605 -6.916 1.00 0.00 N ATOM 66 CA ASP 9 37.023 16.498 -8.237 1.00 0.00 C ATOM 67 CB ASP 9 36.481 15.367 -9.112 1.00 0.00 C ATOM 68 C ASP 9 37.338 17.668 -9.068 1.00 0.00 C ATOM 69 O ASP 9 36.489 18.116 -9.838 1.00 0.00 O ATOM 70 CG ASP 9 37.322 15.308 -10.379 1.00 0.00 C ATOM 71 OD1 ASP 9 38.182 16.210 -10.561 1.00 0.00 O ATOM 72 OD2 ASP 9 37.118 14.358 -11.182 1.00 0.00 O ATOM 73 N VAL 10 38.538 18.216 -8.948 1.00 0.00 N ATOM 74 CA VAL 10 38.711 19.472 -9.894 1.00 0.00 C ATOM 75 CB VAL 10 38.607 20.793 -9.090 1.00 0.00 C ATOM 76 C VAL 10 40.062 19.118 -10.702 1.00 0.00 C ATOM 77 O VAL 10 40.789 18.172 -10.406 1.00 0.00 O ATOM 78 CG1 VAL 10 37.248 20.992 -8.418 1.00 0.00 C ATOM 79 CG2 VAL 10 39.632 20.900 -7.959 1.00 0.00 C ATOM 80 N ALA 11 40.408 20.066 -11.560 1.00 0.00 N ATOM 81 CA ALA 11 41.758 20.092 -12.078 1.00 0.00 C ATOM 82 CB ALA 11 41.568 20.474 -13.553 1.00 0.00 C ATOM 83 C ALA 11 42.927 20.985 -11.529 1.00 0.00 C ATOM 84 O ALA 11 43.427 21.874 -12.230 1.00 0.00 O ATOM 85 N LEU 12 43.267 20.793 -10.243 1.00 0.00 N ATOM 86 CA LEU 12 44.330 21.600 -9.722 1.00 0.00 C ATOM 87 CB LEU 12 43.836 21.497 -8.281 1.00 0.00 C ATOM 88 C LEU 12 45.759 21.067 -9.690 1.00 0.00 C ATOM 89 O LEU 12 46.040 19.882 -9.721 1.00 0.00 O ATOM 90 CG LEU 12 42.420 22.039 -8.081 1.00 0.00 C ATOM 91 CD1 LEU 12 41.862 21.884 -6.667 1.00 0.00 C ATOM 92 CD2 LEU 12 42.253 23.532 -8.366 1.00 0.00 C ATOM 93 N SER 13 46.683 22.007 -9.779 1.00 0.00 N ATOM 94 CA SER 13 48.128 21.612 -9.845 1.00 0.00 C ATOM 95 CB SER 13 48.550 20.748 -8.645 1.00 0.00 C ATOM 96 C SER 13 48.488 21.002 -11.136 1.00 0.00 C ATOM 97 O SER 13 49.466 20.263 -11.130 1.00 0.00 O ATOM 98 OG SER 13 48.367 21.469 -7.435 1.00 0.00 O ATOM 99 N ASP 14 47.684 21.162 -12.189 1.00 0.00 N ATOM 100 CA ASP 14 47.835 20.552 -13.483 1.00 0.00 C ATOM 101 CB ASP 14 49.314 20.576 -13.995 1.00 0.00 C ATOM 102 C ASP 14 47.113 19.271 -13.746 1.00 0.00 C ATOM 103 O ASP 14 46.639 19.072 -14.874 1.00 0.00 O ATOM 104 CG ASP 14 49.660 22.011 -14.365 1.00 0.00 C ATOM 105 OD1 ASP 14 48.716 22.840 -14.468 1.00 0.00 O ATOM 106 OD2 ASP 14 50.873 22.298 -14.550 1.00 0.00 O ATOM 107 N GLY 15 46.893 18.436 -12.728 1.00 0.00 N ATOM 108 CA GLY 15 46.172 17.230 -12.686 1.00 0.00 C ATOM 109 C GLY 15 44.891 17.186 -12.035 1.00 0.00 C ATOM 110 O GLY 15 44.333 18.272 -11.843 1.00 0.00 O ATOM 111 N VAL 16 44.305 16.012 -11.789 1.00 0.00 N ATOM 112 CA VAL 16 42.895 15.799 -11.399 1.00 0.00 C ATOM 113 CB VAL 16 42.505 14.297 -11.206 1.00 0.00 C ATOM 114 C VAL 16 43.198 15.467 -9.819 1.00 0.00 C ATOM 115 O VAL 16 43.440 14.365 -9.328 1.00 0.00 O ATOM 116 CG1 VAL 16 41.038 14.092 -10.822 1.00 0.00 C ATOM 117 CG2 VAL 16 42.712 13.447 -12.461 1.00 0.00 C ATOM 118 N HIS 17 43.080 16.569 -9.074 1.00 0.00 N ATOM 119 CA HIS 17 43.532 17.004 -7.852 1.00 0.00 C ATOM 120 CB HIS 17 44.394 18.231 -7.522 1.00 0.00 C ATOM 121 C HIS 17 42.348 17.088 -6.857 1.00 0.00 C ATOM 122 O HIS 17 42.121 18.099 -6.181 1.00 0.00 O ATOM 123 CG HIS 17 44.953 18.197 -6.131 1.00 0.00 C ATOM 124 ND1 HIS 17 45.984 19.004 -5.694 1.00 0.00 N ATOM 125 CD2 HIS 17 44.617 17.443 -5.058 1.00 0.00 C ATOM 126 CE1 HIS 17 46.258 18.763 -4.448 1.00 0.00 C ATOM 127 NE2 HIS 17 45.443 17.814 -4.026 1.00 0.00 N ATOM 128 N LYS 18 41.560 16.001 -6.832 1.00 0.00 N ATOM 129 CA LYS 18 40.480 15.860 -5.899 1.00 0.00 C ATOM 130 CB LYS 18 39.684 14.618 -6.325 1.00 0.00 C ATOM 131 C LYS 18 40.781 15.312 -4.481 1.00 0.00 C ATOM 132 O LYS 18 41.701 14.522 -4.308 1.00 0.00 O ATOM 133 CG LYS 18 40.463 13.311 -6.169 1.00 0.00 C ATOM 134 CD LYS 18 39.686 12.077 -6.632 1.00 0.00 C ATOM 135 CE LYS 18 40.467 10.770 -6.479 1.00 0.00 C ATOM 136 NZ LYS 18 39.641 9.630 -6.937 1.00 0.00 N ATOM 137 N ILE 19 39.996 15.737 -3.483 1.00 0.00 N ATOM 138 CA ILE 19 40.060 15.489 -2.141 1.00 0.00 C ATOM 139 CB ILE 19 40.915 16.511 -1.374 1.00 0.00 C ATOM 140 C ILE 19 38.765 15.723 -1.431 1.00 0.00 C ATOM 141 O ILE 19 37.852 16.480 -1.781 1.00 0.00 O ATOM 142 CG1 ILE 19 41.194 16.105 0.084 1.00 0.00 C ATOM 143 CG2 ILE 19 40.273 17.906 -1.288 1.00 0.00 C ATOM 144 CD1 ILE 19 42.206 14.968 0.217 1.00 0.00 C ATOM 145 N GLU 20 38.645 14.860 -0.414 1.00 0.00 N ATOM 146 CA GLU 20 37.654 14.562 0.651 1.00 0.00 C ATOM 147 CB GLU 20 37.653 13.038 0.937 1.00 0.00 C ATOM 148 C GLU 20 37.541 15.396 1.872 1.00 0.00 C ATOM 149 O GLU 20 38.595 15.866 2.302 1.00 0.00 O ATOM 150 CG GLU 20 37.185 12.195 -0.251 1.00 0.00 C ATOM 151 CD GLU 20 37.190 10.735 0.178 1.00 0.00 C ATOM 152 OE1 GLU 20 37.600 10.461 1.337 1.00 0.00 O ATOM 153 OE2 GLU 20 36.783 9.874 -0.647 1.00 0.00 O ATOM 154 N PHE 21 36.371 15.534 2.484 1.00 0.00 N ATOM 155 CA PHE 21 36.280 16.227 3.778 1.00 0.00 C ATOM 156 CB PHE 21 35.168 17.253 3.887 1.00 0.00 C ATOM 157 C PHE 21 35.851 15.261 4.904 1.00 0.00 C ATOM 158 O PHE 21 34.651 15.118 5.141 1.00 0.00 O ATOM 159 CG PHE 21 35.458 18.334 2.904 1.00 0.00 C ATOM 160 CD1 PHE 21 34.955 18.301 1.584 1.00 0.00 C ATOM 161 CD2 PHE 21 36.256 19.429 3.281 1.00 0.00 C ATOM 162 CE1 PHE 21 35.234 19.342 0.652 1.00 0.00 C ATOM 163 CE2 PHE 21 36.552 20.486 2.367 1.00 0.00 C ATOM 164 CZ PHE 21 36.039 20.438 1.045 1.00 0.00 C ATOM 165 N GLU 22 36.800 14.583 5.572 1.00 0.00 N ATOM 166 CA GLU 22 36.418 13.635 6.553 1.00 0.00 C ATOM 167 CB GLU 22 37.684 12.962 7.105 1.00 0.00 C ATOM 168 C GLU 22 35.849 14.171 7.842 1.00 0.00 C ATOM 169 O GLU 22 36.395 14.894 8.679 1.00 0.00 O ATOM 170 CG GLU 22 37.393 11.822 8.083 1.00 0.00 C ATOM 171 CD GLU 22 38.724 11.232 8.526 1.00 0.00 C ATOM 172 OE1 GLU 22 39.777 11.693 8.010 1.00 0.00 O ATOM 173 OE2 GLU 22 38.705 10.312 9.387 1.00 0.00 O ATOM 174 N HIS 23 34.594 13.788 7.939 1.00 0.00 N ATOM 175 CA HIS 23 33.628 14.065 9.097 1.00 0.00 C ATOM 176 CB HIS 23 32.358 13.228 9.206 1.00 0.00 C ATOM 177 C HIS 23 34.339 13.865 10.457 1.00 0.00 C ATOM 178 O HIS 23 33.884 14.413 11.442 1.00 0.00 O ATOM 179 CG HIS 23 31.497 13.617 10.371 1.00 0.00 C ATOM 180 ND1 HIS 23 30.742 14.771 10.421 1.00 0.00 N ATOM 181 CD2 HIS 23 31.266 12.994 11.551 1.00 0.00 C ATOM 182 CE1 HIS 23 30.096 14.847 11.544 1.00 0.00 C ATOM 183 NE2 HIS 23 30.392 13.779 12.261 1.00 0.00 N ATOM 184 N GLY 24 35.385 13.053 10.506 1.00 0.00 N ATOM 185 CA GLY 24 36.004 12.734 11.748 1.00 0.00 C ATOM 186 C GLY 24 36.538 13.933 12.529 1.00 0.00 C ATOM 187 O GLY 24 36.578 13.962 13.759 1.00 0.00 O ATOM 188 N THR 25 36.955 14.914 11.741 1.00 0.00 N ATOM 189 CA THR 25 37.515 16.167 12.358 1.00 0.00 C ATOM 190 CB THR 25 39.017 16.152 12.579 1.00 0.00 C ATOM 191 C THR 25 37.410 17.273 11.382 1.00 0.00 C ATOM 192 O THR 25 37.724 18.458 11.506 1.00 0.00 O ATOM 193 OG1 THR 25 39.689 15.892 11.355 1.00 0.00 O ATOM 194 CG2 THR 25 39.371 15.054 13.597 1.00 0.00 C ATOM 195 N THR 26 36.628 16.975 10.350 1.00 0.00 N ATOM 196 CA THR 26 36.113 17.982 9.328 1.00 0.00 C ATOM 197 CB THR 26 35.439 19.292 9.855 1.00 0.00 C ATOM 198 C THR 26 37.496 18.523 8.768 1.00 0.00 C ATOM 199 O THR 26 38.075 19.547 9.090 1.00 0.00 O ATOM 200 OG1 THR 26 36.365 20.040 10.630 1.00 0.00 O ATOM 201 CG2 THR 26 34.225 18.926 10.726 1.00 0.00 C ATOM 202 N SER 27 38.179 17.501 8.286 1.00 0.00 N ATOM 203 CA SER 27 39.582 17.603 7.824 1.00 0.00 C ATOM 204 CB SER 27 39.465 17.594 6.298 1.00 0.00 C ATOM 205 C SER 27 40.507 18.487 8.608 1.00 0.00 C ATOM 206 O SER 27 40.046 19.330 9.376 1.00 0.00 O ATOM 207 OG SER 27 38.880 16.376 5.861 1.00 0.00 O ATOM 208 N GLY 28 41.810 18.316 8.419 1.00 0.00 N ATOM 209 CA GLY 28 42.816 19.126 9.114 1.00 0.00 C ATOM 210 C GLY 28 42.768 20.478 8.414 1.00 0.00 C ATOM 211 O GLY 28 43.154 21.498 8.979 1.00 0.00 O ATOM 212 N LYS 29 42.295 20.475 7.175 1.00 0.00 N ATOM 213 CA LYS 29 42.132 21.864 6.569 1.00 0.00 C ATOM 214 CB LYS 29 41.047 22.875 6.939 1.00 0.00 C ATOM 215 C LYS 29 43.440 21.862 5.634 1.00 0.00 C ATOM 216 O LYS 29 44.254 20.908 5.484 1.00 0.00 O ATOM 217 CG LYS 29 39.638 22.432 6.539 1.00 0.00 C ATOM 218 CD LYS 29 38.568 23.496 6.786 1.00 0.00 C ATOM 219 CE LYS 29 38.231 23.694 8.266 1.00 0.00 C ATOM 220 NZ LYS 29 37.581 22.479 8.804 1.00 0.00 N ATOM 221 N ARG 30 43.548 23.000 4.961 1.00 0.00 N ATOM 222 CA ARG 30 44.569 23.287 4.025 1.00 0.00 C ATOM 223 CB ARG 30 45.924 23.154 4.710 1.00 0.00 C ATOM 224 C ARG 30 43.918 22.869 2.787 1.00 0.00 C ATOM 225 O ARG 30 43.767 23.697 1.885 1.00 0.00 O ATOM 226 CG ARG 30 47.102 23.545 3.816 1.00 0.00 C ATOM 227 CD ARG 30 48.462 23.421 4.503 1.00 0.00 C ATOM 228 NE ARG 30 48.494 24.414 5.615 1.00 0.00 N ATOM 229 CZ ARG 30 48.807 25.717 5.355 1.00 0.00 C ATOM 230 NH1 ARG 30 49.042 25.831 4.016 1.00 0.00 N ATOM 231 NH2 ARG 30 48.762 26.398 6.537 1.00 0.00 N ATOM 232 N VAL 31 43.437 21.635 2.752 1.00 0.00 N ATOM 233 CA VAL 31 42.825 20.953 1.585 1.00 0.00 C ATOM 234 CB VAL 31 43.915 20.108 0.848 1.00 0.00 C ATOM 235 C VAL 31 41.800 20.043 2.231 1.00 0.00 C ATOM 236 O VAL 31 40.851 19.634 1.589 1.00 0.00 O ATOM 237 CG1 VAL 31 43.367 19.298 -0.328 1.00 0.00 C ATOM 238 CG2 VAL 31 45.047 20.952 0.261 1.00 0.00 C ATOM 239 N VAL 32 41.968 19.714 3.483 1.00 0.00 N ATOM 240 CA VAL 32 41.019 18.844 4.179 1.00 0.00 C ATOM 241 CB VAL 32 39.729 19.546 4.612 1.00 0.00 C ATOM 242 C VAL 32 41.536 17.503 3.820 1.00 0.00 C ATOM 243 O VAL 32 42.198 16.862 4.641 1.00 0.00 O ATOM 244 CG1 VAL 32 38.713 18.606 5.264 1.00 0.00 C ATOM 245 CG2 VAL 32 39.956 20.662 5.634 1.00 0.00 C ATOM 246 N TYR 33 41.350 17.107 2.569 1.00 0.00 N ATOM 247 CA TYR 33 41.894 15.965 1.861 1.00 0.00 C ATOM 248 CB TYR 33 40.714 14.982 1.879 1.00 0.00 C ATOM 249 C TYR 33 42.539 16.349 0.558 1.00 0.00 C ATOM 250 O TYR 33 41.854 16.757 -0.379 1.00 0.00 O ATOM 251 CG TYR 33 41.177 13.714 1.248 1.00 0.00 C ATOM 252 CD1 TYR 33 41.906 12.786 2.002 1.00 0.00 C ATOM 253 CD2 TYR 33 40.893 13.414 -0.103 1.00 0.00 C ATOM 254 CE1 TYR 33 42.358 11.575 1.440 1.00 0.00 C ATOM 255 CE2 TYR 33 41.345 12.188 -0.690 1.00 0.00 C ATOM 256 CZ TYR 33 42.078 11.280 0.102 1.00 0.00 C ATOM 257 OH TYR 33 42.537 10.090 -0.420 1.00 0.00 O ATOM 258 N VAL 34 43.848 16.180 0.450 1.00 0.00 N ATOM 259 CA VAL 34 44.432 16.625 -0.889 1.00 0.00 C ATOM 260 CB VAL 34 45.074 18.035 -0.859 1.00 0.00 C ATOM 261 C VAL 34 45.706 16.006 -1.243 1.00 0.00 C ATOM 262 O VAL 34 46.629 16.241 -0.469 1.00 0.00 O ATOM 263 CG1 VAL 34 46.200 18.172 0.168 1.00 0.00 C ATOM 264 CG2 VAL 34 45.697 18.451 -2.193 1.00 0.00 C ATOM 265 N ASP 35 45.839 15.262 -2.341 1.00 0.00 N ATOM 266 CA ASP 35 47.004 14.560 -2.776 1.00 0.00 C ATOM 267 CB ASP 35 48.132 15.562 -3.183 1.00 0.00 C ATOM 268 C ASP 35 47.589 13.677 -1.681 1.00 0.00 C ATOM 269 O ASP 35 48.810 13.696 -1.497 1.00 0.00 O ATOM 270 CG ASP 35 49.133 14.816 -4.052 1.00 0.00 C ATOM 271 OD1 ASP 35 48.774 13.719 -4.560 1.00 0.00 O ATOM 272 OD2 ASP 35 50.271 15.331 -4.220 1.00 0.00 O ATOM 273 N GLY 36 46.754 12.967 -0.925 1.00 0.00 N ATOM 274 CA GLY 36 47.138 12.180 0.184 1.00 0.00 C ATOM 275 C GLY 36 47.529 12.980 1.514 1.00 0.00 C ATOM 276 O GLY 36 47.521 12.449 2.618 1.00 0.00 O ATOM 277 N LYS 37 47.922 14.238 1.338 1.00 0.00 N ATOM 278 CA LYS 37 48.132 15.014 2.513 1.00 0.00 C ATOM 279 CB LYS 37 48.922 16.186 1.913 1.00 0.00 C ATOM 280 C LYS 37 47.009 15.291 3.453 1.00 0.00 C ATOM 281 O LYS 37 45.885 15.190 2.961 1.00 0.00 O ATOM 282 CG LYS 37 50.307 15.789 1.399 1.00 0.00 C ATOM 283 CD LYS 37 51.093 16.954 0.795 1.00 0.00 C ATOM 284 CE LYS 37 52.502 16.571 0.338 1.00 0.00 C ATOM 285 NZ LYS 37 53.187 17.751 -0.236 1.00 0.00 N ATOM 286 N GLU 38 47.199 15.675 4.711 1.00 0.00 N ATOM 287 CA GLU 38 46.042 16.037 5.516 1.00 0.00 C ATOM 288 CB GLU 38 46.554 16.196 6.939 1.00 0.00 C ATOM 289 C GLU 38 45.483 17.411 5.297 1.00 0.00 C ATOM 290 O GLU 38 44.711 17.905 6.102 1.00 0.00 O ATOM 291 CG GLU 38 47.070 14.892 7.551 1.00 0.00 C ATOM 292 CD GLU 38 47.614 15.207 8.937 1.00 0.00 C ATOM 293 OE1 GLU 38 47.576 16.403 9.330 1.00 0.00 O ATOM 294 OE2 GLU 38 48.077 14.254 9.620 1.00 0.00 O ATOM 295 N GLU 39 45.972 18.069 4.259 1.00 0.00 N ATOM 296 CA GLU 39 45.677 19.455 3.895 1.00 0.00 C ATOM 297 CB GLU 39 44.163 19.700 3.879 1.00 0.00 C ATOM 298 C GLU 39 46.973 20.244 4.385 1.00 0.00 C ATOM 299 O GLU 39 47.590 21.001 3.650 1.00 0.00 O ATOM 300 CG GLU 39 43.442 18.984 2.735 1.00 0.00 C ATOM 301 CD GLU 39 44.023 19.491 1.423 1.00 0.00 C ATOM 302 OE1 GLU 39 44.060 20.737 1.233 1.00 0.00 O ATOM 303 OE2 GLU 39 44.437 18.640 0.592 1.00 0.00 O ATOM 304 N ILE 40 47.315 20.043 5.642 1.00 0.00 N ATOM 305 CA ILE 40 48.312 20.705 6.332 1.00 0.00 C ATOM 306 CB ILE 40 49.521 21.108 5.512 1.00 0.00 C ATOM 307 C ILE 40 47.517 21.457 7.415 1.00 0.00 C ATOM 308 O ILE 40 47.977 21.590 8.552 1.00 0.00 O ATOM 309 CG1 ILE 40 50.352 19.913 5.016 1.00 0.00 C ATOM 310 CG2 ILE 40 50.515 21.998 6.280 1.00 0.00 C ATOM 311 CD1 ILE 40 51.406 20.293 3.976 1.00 0.00 C ATOM 312 N ARG 41 46.328 21.927 7.045 1.00 0.00 N ATOM 313 CA ARG 41 45.442 22.668 7.864 1.00 0.00 C ATOM 314 CB ARG 41 45.860 22.839 9.326 1.00 0.00 C ATOM 315 C ARG 41 44.911 23.943 7.497 1.00 0.00 C ATOM 316 O ARG 41 45.686 24.779 7.024 1.00 0.00 O ATOM 317 CG ARG 41 44.824 23.578 10.175 1.00 0.00 C ATOM 318 CD ARG 41 45.213 23.696 11.650 1.00 0.00 C ATOM 319 NE ARG 41 44.121 24.437 12.343 1.00 0.00 N ATOM 320 CZ ARG 41 44.211 24.690 13.681 1.00 0.00 C ATOM 321 NH1 ARG 41 45.387 24.161 14.127 1.00 0.00 N ATOM 322 NH2 ARG 41 43.089 25.375 14.051 1.00 0.00 N ATOM 323 N LYS 42 43.579 24.098 7.537 1.00 0.00 N ATOM 324 CA LYS 42 42.816 25.339 7.224 1.00 0.00 C ATOM 325 CB LYS 42 41.951 25.144 5.968 1.00 0.00 C ATOM 326 C LYS 42 42.151 25.664 8.599 1.00 0.00 C ATOM 327 O LYS 42 41.859 24.742 9.348 1.00 0.00 O ATOM 328 CG LYS 42 40.830 24.119 6.153 1.00 0.00 C ATOM 329 CD LYS 42 40.058 23.816 4.866 1.00 0.00 C ATOM 330 CE LYS 42 39.019 22.705 5.022 1.00 0.00 C ATOM 331 NZ LYS 42 37.906 23.170 5.881 1.00 0.00 N ATOM 332 N GLU 43 41.794 26.912 8.837 1.00 0.00 N ATOM 333 CA GLU 43 41.157 27.151 10.123 1.00 0.00 C ATOM 334 CB GLU 43 41.287 28.684 10.076 1.00 0.00 C ATOM 335 C GLU 43 39.903 26.469 10.389 1.00 0.00 C ATOM 336 O GLU 43 39.136 26.321 9.433 1.00 0.00 O ATOM 337 CG GLU 43 40.763 29.379 11.335 1.00 0.00 C ATOM 338 CD GLU 43 41.001 30.874 11.180 1.00 0.00 C ATOM 339 OE1 GLU 43 41.548 31.280 10.120 1.00 0.00 O ATOM 340 OE2 GLU 43 40.639 31.631 12.119 1.00 0.00 O ATOM 341 N TRP 44 39.639 26.034 11.619 1.00 0.00 N ATOM 342 CA TRP 44 38.370 25.333 11.959 1.00 0.00 C ATOM 343 CB TRP 44 38.527 24.704 13.357 1.00 0.00 C ATOM 344 C TRP 44 37.577 26.368 12.752 1.00 0.00 C ATOM 345 O TRP 44 36.878 26.120 13.738 1.00 0.00 O ATOM 346 CG TRP 44 39.578 23.622 13.429 1.00 0.00 C ATOM 347 CD1 TRP 44 40.368 23.115 12.439 1.00 0.00 C ATOM 348 CD2 TRP 44 39.973 22.879 14.592 1.00 0.00 C ATOM 349 NE1 TRP 44 41.191 22.166 12.842 1.00 0.00 N ATOM 350 CE2 TRP 44 40.989 21.975 14.185 1.00 0.00 C ATOM 351 CE3 TRP 44 39.571 22.888 15.944 1.00 0.00 C ATOM 352 CZ2 TRP 44 41.616 21.076 15.089 1.00 0.00 C ATOM 353 CZ3 TRP 44 40.196 21.988 16.858 1.00 0.00 C ATOM 354 CH2 TRP 44 41.207 21.098 16.416 1.00 0.00 C ATOM 355 N MET 45 37.571 27.597 12.252 1.00 0.00 N ATOM 356 CA MET 45 36.611 28.648 12.553 1.00 0.00 C ATOM 357 CB MET 45 36.712 29.878 11.635 1.00 0.00 C ATOM 358 C MET 45 35.108 28.239 12.404 1.00 0.00 C ATOM 359 O MET 45 34.540 27.765 11.408 1.00 0.00 O ATOM 360 CG MET 45 35.799 31.031 12.057 1.00 0.00 C ATOM 361 SD MET 45 36.010 32.554 11.087 1.00 0.00 S ATOM 362 CE MET 45 37.614 32.987 11.819 1.00 0.00 C ATOM 363 N PHE 46 34.516 28.422 13.574 1.00 0.00 N ATOM 364 CA PHE 46 33.166 28.114 14.066 1.00 0.00 C ATOM 365 CB PHE 46 32.868 27.354 15.358 1.00 0.00 C ATOM 366 C PHE 46 32.265 29.222 13.907 1.00 0.00 C ATOM 367 O PHE 46 32.239 29.860 14.958 1.00 0.00 O ATOM 368 CG PHE 46 31.398 27.118 15.410 1.00 0.00 C ATOM 369 CD1 PHE 46 30.777 26.088 14.668 1.00 0.00 C ATOM 370 CD2 PHE 46 30.586 27.934 16.219 1.00 0.00 C ATOM 371 CE1 PHE 46 29.371 25.867 14.727 1.00 0.00 C ATOM 372 CE2 PHE 46 29.173 27.735 16.296 1.00 0.00 C ATOM 373 CZ PHE 46 28.565 26.697 15.544 1.00 0.00 C ATOM 374 N LYS 47 31.538 29.575 12.842 1.00 0.00 N ATOM 375 CA LYS 47 30.850 31.052 13.396 1.00 0.00 C ATOM 376 CB LYS 47 30.867 31.823 12.074 1.00 0.00 C ATOM 377 C LYS 47 29.498 30.723 14.240 1.00 0.00 C ATOM 378 O LYS 47 29.304 29.693 14.876 1.00 0.00 O ATOM 379 CG LYS 47 32.275 32.179 11.593 1.00 0.00 C ATOM 380 CD LYS 47 32.295 32.968 10.283 1.00 0.00 C ATOM 381 CE LYS 47 33.703 33.323 9.801 1.00 0.00 C ATOM 382 NZ LYS 47 33.630 34.040 8.509 1.00 0.00 N ATOM 383 N LEU 48 28.587 31.670 14.077 1.00 0.00 N ATOM 384 CA LEU 48 27.307 31.483 14.700 1.00 0.00 C ATOM 385 CB LEU 48 26.562 32.813 14.493 1.00 0.00 C ATOM 386 C LEU 48 26.606 30.195 14.071 1.00 0.00 C ATOM 387 O LEU 48 25.762 29.470 14.609 1.00 0.00 O ATOM 388 CG LEU 48 27.144 33.972 15.305 1.00 0.00 C ATOM 389 CD1 LEU 48 26.545 35.343 14.994 1.00 0.00 C ATOM 390 CD2 LEU 48 26.976 33.846 16.819 1.00 0.00 C ATOM 391 N VAL 49 26.897 30.158 12.763 1.00 0.00 N ATOM 392 CA VAL 49 26.301 28.940 12.059 1.00 0.00 C ATOM 393 CB VAL 49 24.921 29.207 11.434 1.00 0.00 C ATOM 394 C VAL 49 27.231 27.831 11.315 1.00 0.00 C ATOM 395 O VAL 49 27.027 26.624 11.133 1.00 0.00 O ATOM 396 CG1 VAL 49 24.360 28.013 10.661 1.00 0.00 C ATOM 397 CG2 VAL 49 23.843 29.561 12.461 1.00 0.00 C ATOM 398 N GLY 50 28.127 28.507 10.602 1.00 0.00 N ATOM 399 CA GLY 50 28.816 27.175 9.818 1.00 0.00 C ATOM 400 C GLY 50 30.232 27.982 9.404 1.00 0.00 C ATOM 401 O GLY 50 30.491 29.176 9.213 1.00 0.00 O ATOM 402 N LYS 51 31.179 27.039 9.499 1.00 0.00 N ATOM 403 CA LYS 51 32.548 26.795 9.153 1.00 0.00 C ATOM 404 CB LYS 51 32.918 25.335 9.421 1.00 0.00 C ATOM 405 C LYS 51 33.340 27.114 7.981 1.00 0.00 C ATOM 406 O LYS 51 32.797 26.894 6.887 1.00 0.00 O ATOM 407 CG LYS 51 32.813 24.939 10.895 1.00 0.00 C ATOM 408 CD LYS 51 33.209 23.487 11.170 1.00 0.00 C ATOM 409 CE LYS 51 32.998 23.058 12.623 1.00 0.00 C ATOM 410 NZ LYS 51 33.449 21.662 12.811 1.00 0.00 N ATOM 411 N GLU 52 34.556 27.664 8.083 1.00 0.00 N ATOM 412 CA GLU 52 35.351 28.037 6.892 1.00 0.00 C ATOM 413 CB GLU 52 35.098 29.189 7.867 1.00 0.00 C ATOM 414 C GLU 52 36.791 28.133 6.999 1.00 0.00 C ATOM 415 O GLU 52 37.308 28.156 8.132 1.00 0.00 O ATOM 416 CG GLU 52 35.653 30.531 7.383 1.00 0.00 C ATOM 417 CD GLU 52 34.963 30.881 6.073 1.00 0.00 C ATOM 418 OE1 GLU 52 35.277 30.223 5.044 1.00 0.00 O ATOM 419 OE2 GLU 52 34.111 31.809 6.082 1.00 0.00 O ATOM 420 N THR 53 37.509 28.045 5.848 1.00 0.00 N ATOM 421 CA THR 53 39.012 27.999 5.816 1.00 0.00 C ATOM 422 CB THR 53 40.187 28.738 6.506 1.00 0.00 C ATOM 423 C THR 53 39.909 27.107 5.130 1.00 0.00 C ATOM 424 O THR 53 39.923 25.996 5.664 1.00 0.00 O ATOM 425 OG1 THR 53 40.113 30.130 6.238 1.00 0.00 O ATOM 426 CG2 THR 53 41.519 28.186 5.972 1.00 0.00 C ATOM 427 N PHE 54 40.698 27.441 4.106 1.00 0.00 N ATOM 428 CA PHE 54 41.815 26.591 3.656 1.00 0.00 C ATOM 429 CB PHE 54 41.464 25.255 2.990 1.00 0.00 C ATOM 430 C PHE 54 42.597 27.328 2.700 1.00 0.00 C ATOM 431 O PHE 54 42.335 28.489 2.402 1.00 0.00 O ATOM 432 CG PHE 54 40.627 25.557 1.794 1.00 0.00 C ATOM 433 CD1 PHE 54 41.197 25.806 0.525 1.00 0.00 C ATOM 434 CD2 PHE 54 39.226 25.598 1.911 1.00 0.00 C ATOM 435 CE1 PHE 54 40.389 26.090 -0.613 1.00 0.00 C ATOM 436 CE2 PHE 54 38.393 25.879 0.786 1.00 0.00 C ATOM 437 CZ PHE 54 38.980 26.128 -0.482 1.00 0.00 C ATOM 438 N TYR 55 43.755 26.746 2.420 1.00 0.00 N ATOM 439 CA TYR 55 44.996 27.319 1.690 1.00 0.00 C ATOM 440 CB TYR 55 46.111 27.877 2.592 1.00 0.00 C ATOM 441 C TYR 55 45.539 26.240 0.717 1.00 0.00 C ATOM 442 O TYR 55 45.723 25.115 1.166 1.00 0.00 O ATOM 443 CG TYR 55 45.528 28.997 3.384 1.00 0.00 C ATOM 444 CD1 TYR 55 44.988 28.745 4.652 1.00 0.00 C ATOM 445 CD2 TYR 55 45.509 30.320 2.891 1.00 0.00 C ATOM 446 CE1 TYR 55 44.430 29.778 5.432 1.00 0.00 C ATOM 447 CE2 TYR 55 44.946 31.382 3.672 1.00 0.00 C ATOM 448 CZ TYR 55 44.411 31.088 4.942 1.00 0.00 C ATOM 449 OH TYR 55 43.855 32.076 5.726 1.00 0.00 O ATOM 450 N VAL 56 45.855 26.580 -0.525 1.00 0.00 N ATOM 451 CA VAL 56 46.525 25.559 -1.314 1.00 0.00 C ATOM 452 CB VAL 56 45.584 24.989 -2.415 1.00 0.00 C ATOM 453 C VAL 56 47.596 26.070 -2.104 1.00 0.00 C ATOM 454 O VAL 56 47.266 27.043 -2.782 1.00 0.00 O ATOM 455 CG1 VAL 56 46.243 23.915 -3.284 1.00 0.00 C ATOM 456 CG2 VAL 56 44.319 24.334 -1.859 1.00 0.00 C ATOM 457 N GLY 57 48.817 25.549 -2.164 1.00 0.00 N ATOM 458 CA GLY 57 49.946 26.059 -2.893 1.00 0.00 C ATOM 459 C GLY 57 50.593 27.185 -2.016 1.00 0.00 C ATOM 460 O GLY 57 51.733 27.538 -2.308 1.00 0.00 O ATOM 461 N ALA 58 50.002 27.677 -0.933 1.00 0.00 N ATOM 462 CA ALA 58 50.599 28.586 -0.132 1.00 0.00 C ATOM 463 CB ALA 58 52.023 28.190 0.267 1.00 0.00 C ATOM 464 C ALA 58 49.730 29.776 -0.502 1.00 0.00 C ATOM 465 O ALA 58 48.608 29.929 -0.006 1.00 0.00 O ATOM 466 N ALA 59 50.235 30.574 -1.434 1.00 0.00 N ATOM 467 CA ALA 59 49.450 31.732 -1.929 1.00 0.00 C ATOM 468 CB ALA 59 50.468 32.820 -1.623 1.00 0.00 C ATOM 469 C ALA 59 49.159 31.354 -3.345 1.00 0.00 C ATOM 470 O ALA 59 48.419 32.086 -4.015 1.00 0.00 O ATOM 471 N LYS 60 49.660 30.216 -3.791 1.00 0.00 N ATOM 472 CA LYS 60 49.444 29.694 -5.137 1.00 0.00 C ATOM 473 CB LYS 60 50.106 28.325 -5.332 1.00 0.00 C ATOM 474 C LYS 60 47.990 29.800 -5.516 1.00 0.00 C ATOM 475 O LYS 60 47.653 30.293 -6.595 1.00 0.00 O ATOM 476 CG LYS 60 49.938 27.761 -6.744 1.00 0.00 C ATOM 477 CD LYS 60 50.651 26.424 -6.959 1.00 0.00 C ATOM 478 CE LYS 60 50.442 25.836 -8.357 1.00 0.00 C ATOM 479 NZ LYS 60 51.181 24.560 -8.484 1.00 0.00 N ATOM 480 N THR 61 47.128 29.340 -4.612 1.00 0.00 N ATOM 481 CA THR 61 45.682 29.345 -4.739 1.00 0.00 C ATOM 482 CB THR 61 45.123 28.063 -5.430 1.00 0.00 C ATOM 483 C THR 61 45.009 29.631 -3.393 1.00 0.00 C ATOM 484 O THR 61 45.618 29.211 -2.409 1.00 0.00 O ATOM 485 OG1 THR 61 45.703 27.910 -6.717 1.00 0.00 O ATOM 486 CG2 THR 61 43.596 28.185 -5.571 1.00 0.00 C ATOM 487 N LYS 62 43.812 30.202 -3.327 1.00 0.00 N ATOM 488 CA LYS 62 43.156 30.234 -2.042 1.00 0.00 C ATOM 489 CB LYS 62 42.792 31.441 -2.919 1.00 0.00 C ATOM 490 C LYS 62 41.917 29.456 -2.298 1.00 0.00 C ATOM 491 O LYS 62 41.110 29.760 -3.174 1.00 0.00 O ATOM 492 CG LYS 62 43.983 32.349 -3.233 1.00 0.00 C ATOM 493 CD LYS 62 43.610 33.586 -4.053 1.00 0.00 C ATOM 494 CE LYS 62 44.804 34.486 -4.378 1.00 0.00 C ATOM 495 NZ LYS 62 44.344 35.697 -5.094 1.00 0.00 N ATOM 496 N ALA 63 41.784 28.374 -1.542 1.00 0.00 N ATOM 497 CA ALA 63 40.635 27.416 -1.661 1.00 0.00 C ATOM 498 CB ALA 63 41.349 26.124 -2.005 1.00 0.00 C ATOM 499 C ALA 63 39.907 27.248 -0.323 1.00 0.00 C ATOM 500 O ALA 63 40.573 27.273 0.712 1.00 0.00 O ATOM 501 N THR 64 38.580 27.249 -0.322 1.00 0.00 N ATOM 502 CA THR 64 37.862 27.031 0.909 1.00 0.00 C ATOM 503 CB THR 64 37.221 28.392 1.298 1.00 0.00 C ATOM 504 C THR 64 36.843 26.006 0.910 1.00 0.00 C ATOM 505 O THR 64 36.451 25.672 -0.207 1.00 0.00 O ATOM 506 OG1 THR 64 36.295 28.797 0.301 1.00 0.00 O ATOM 507 CG2 THR 64 38.325 29.456 1.428 1.00 0.00 C ATOM 508 N ILE 65 36.366 25.494 2.039 1.00 0.00 N ATOM 509 CA ILE 65 35.241 24.536 2.068 1.00 0.00 C ATOM 510 CB ILE 65 35.562 23.201 2.816 1.00 0.00 C ATOM 511 C ILE 65 34.320 25.562 3.088 1.00 0.00 C ATOM 512 O ILE 65 34.576 26.250 4.066 1.00 0.00 O ATOM 513 CG1 ILE 65 36.717 22.407 2.184 1.00 0.00 C ATOM 514 CG2 ILE 65 34.376 22.222 2.858 1.00 0.00 C ATOM 515 CD1 ILE 65 37.184 21.228 3.036 1.00 0.00 C ATOM 516 N ASN 66 33.149 25.593 2.466 1.00 0.00 N ATOM 517 CA ASN 66 31.943 26.374 2.494 1.00 0.00 C ATOM 518 CB ASN 66 31.398 27.180 1.316 1.00 0.00 C ATOM 519 C ASN 66 30.931 25.352 3.208 1.00 0.00 C ATOM 520 O ASN 66 30.105 24.712 2.555 1.00 0.00 O ATOM 521 CG ASN 66 30.228 28.015 1.818 1.00 0.00 C ATOM 522 OD1 ASN 66 29.665 27.744 2.878 1.00 0.00 O ATOM 523 ND2 ASN 66 29.800 29.077 1.085 1.00 0.00 N ATOM 524 N ILE 67 31.029 25.247 4.528 1.00 0.00 N ATOM 525 CA ILE 67 30.121 24.430 5.204 1.00 0.00 C ATOM 526 CB ILE 67 30.959 23.814 6.358 1.00 0.00 C ATOM 527 C ILE 67 29.048 24.926 5.744 1.00 0.00 C ATOM 528 O ILE 67 29.157 26.011 6.310 1.00 0.00 O ATOM 529 CG1 ILE 67 32.126 22.939 5.870 1.00 0.00 C ATOM 530 CG2 ILE 67 30.142 22.908 7.295 1.00 0.00 C ATOM 531 CD1 ILE 67 33.102 22.551 6.980 1.00 0.00 C ATOM 532 N ASP 68 27.888 24.308 5.619 1.00 0.00 N ATOM 533 CA ASP 68 26.487 25.084 6.101 1.00 0.00 C ATOM 534 CB ASP 68 25.577 25.473 4.915 1.00 0.00 C ATOM 535 C ASP 68 25.779 23.912 7.155 1.00 0.00 C ATOM 536 O ASP 68 25.821 22.690 7.008 1.00 0.00 O ATOM 537 CG ASP 68 26.306 26.522 4.087 1.00 0.00 C ATOM 538 OD1 ASP 68 26.601 27.614 4.643 1.00 0.00 O ATOM 539 OD2 ASP 68 26.578 26.246 2.888 1.00 0.00 O ATOM 540 N ALA 69 25.167 24.477 8.192 1.00 0.00 N ATOM 541 CA ALA 69 24.607 23.689 9.095 1.00 0.00 C ATOM 542 CB ALA 69 25.159 24.077 10.473 1.00 0.00 C ATOM 543 C ALA 69 23.131 23.682 8.886 1.00 0.00 C ATOM 544 O ALA 69 22.615 24.798 8.951 1.00 0.00 O ATOM 545 N ILE 70 22.417 22.583 8.624 1.00 0.00 N ATOM 546 CA ILE 70 20.919 23.073 8.427 1.00 0.00 C ATOM 547 CB ILE 70 20.587 22.602 6.991 1.00 0.00 C ATOM 548 C ILE 70 19.844 23.361 9.316 1.00 0.00 C ATOM 549 O ILE 70 19.632 24.536 9.636 1.00 0.00 O ATOM 550 CG1 ILE 70 21.481 23.240 5.914 1.00 0.00 C ATOM 551 CG2 ILE 70 19.147 22.920 6.559 1.00 0.00 C ATOM 552 CD1 ILE 70 21.303 22.620 4.530 1.00 0.00 C ATOM 553 N SER 71 19.182 22.343 9.862 1.00 0.00 N ATOM 554 CA SER 71 18.006 22.535 10.808 1.00 0.00 C ATOM 555 CB SER 71 16.576 22.254 10.353 1.00 0.00 C ATOM 556 C SER 71 17.959 21.549 11.844 1.00 0.00 C ATOM 557 O SER 71 17.596 20.494 11.331 1.00 0.00 O ATOM 558 OG SER 71 15.672 22.461 11.427 1.00 0.00 O ATOM 559 N GLY 72 18.180 21.699 13.146 1.00 0.00 N ATOM 560 CA GLY 72 18.240 20.779 14.171 1.00 0.00 C ATOM 561 C GLY 72 19.300 19.679 14.054 1.00 0.00 C ATOM 562 O GLY 72 19.631 18.949 15.005 1.00 0.00 O ATOM 563 N PHE 73 19.505 19.394 12.769 1.00 0.00 N ATOM 564 CA PHE 73 20.684 18.428 12.456 1.00 0.00 C ATOM 565 CB PHE 73 20.481 16.928 12.725 1.00 0.00 C ATOM 566 C PHE 73 21.061 18.602 10.964 1.00 0.00 C ATOM 567 O PHE 73 20.906 19.708 10.482 1.00 0.00 O ATOM 568 CG PHE 73 19.320 16.478 11.908 1.00 0.00 C ATOM 569 CD1 PHE 73 19.479 15.952 10.606 1.00 0.00 C ATOM 570 CD2 PHE 73 18.016 16.573 12.430 1.00 0.00 C ATOM 571 CE1 PHE 73 18.363 15.521 9.833 1.00 0.00 C ATOM 572 CE2 PHE 73 16.881 16.149 11.676 1.00 0.00 C ATOM 573 CZ PHE 73 17.056 15.622 10.370 1.00 0.00 C ATOM 574 N ALA 74 21.823 17.700 10.380 1.00 0.00 N ATOM 575 CA ALA 74 22.239 18.149 9.000 1.00 0.00 C ATOM 576 CB ALA 74 21.255 18.980 8.162 1.00 0.00 C ATOM 577 C ALA 74 23.402 19.265 8.716 1.00 0.00 C ATOM 578 O ALA 74 23.415 20.394 9.194 1.00 0.00 O ATOM 579 N TYR 75 24.371 18.799 7.941 1.00 0.00 N ATOM 580 CA TYR 75 25.439 19.582 7.536 1.00 0.00 C ATOM 581 CB TYR 75 26.761 19.059 8.100 1.00 0.00 C ATOM 582 C TYR 75 25.762 19.400 6.004 1.00 0.00 C ATOM 583 O TYR 75 25.728 18.308 5.451 1.00 0.00 O ATOM 584 CG TYR 75 26.664 19.103 9.586 1.00 0.00 C ATOM 585 CD1 TYR 75 26.181 17.990 10.285 1.00 0.00 C ATOM 586 CD2 TYR 75 27.052 20.245 10.319 1.00 0.00 C ATOM 587 CE1 TYR 75 26.076 17.992 11.690 1.00 0.00 C ATOM 588 CE2 TYR 75 26.952 20.265 11.748 1.00 0.00 C ATOM 589 CZ TYR 75 26.460 19.125 12.416 1.00 0.00 C ATOM 590 OH TYR 75 26.343 19.098 13.788 1.00 0.00 O ATOM 591 N GLU 76 26.068 20.521 5.366 1.00 0.00 N ATOM 592 CA GLU 76 26.418 20.509 3.984 1.00 0.00 C ATOM 593 CB GLU 76 25.395 21.322 3.201 1.00 0.00 C ATOM 594 C GLU 76 27.903 20.866 3.657 1.00 0.00 C ATOM 595 O GLU 76 28.379 21.788 4.320 1.00 0.00 O ATOM 596 CG GLU 76 25.684 21.384 1.700 1.00 0.00 C ATOM 597 CD GLU 76 24.577 22.194 1.041 1.00 0.00 C ATOM 598 OE1 GLU 76 23.666 22.660 1.777 1.00 0.00 O ATOM 599 OE2 GLU 76 24.627 22.358 -0.208 1.00 0.00 O ATOM 600 N TYR 77 28.578 20.257 2.688 1.00 0.00 N ATOM 601 CA TYR 77 29.887 20.852 2.471 1.00 0.00 C ATOM 602 CB TYR 77 30.865 19.674 2.660 1.00 0.00 C ATOM 603 C TYR 77 29.972 21.240 1.007 1.00 0.00 C ATOM 604 O TYR 77 29.401 20.609 0.111 1.00 0.00 O ATOM 605 CG TYR 77 30.763 19.232 4.080 1.00 0.00 C ATOM 606 CD1 TYR 77 29.858 18.223 4.432 1.00 0.00 C ATOM 607 CD2 TYR 77 31.566 19.803 5.091 1.00 0.00 C ATOM 608 CE1 TYR 77 29.735 17.775 5.763 1.00 0.00 C ATOM 609 CE2 TYR 77 31.455 19.360 6.449 1.00 0.00 C ATOM 610 CZ TYR 77 30.531 18.343 6.764 1.00 0.00 C ATOM 611 OH TYR 77 30.385 17.887 8.057 1.00 0.00 O ATOM 612 N THR 78 30.646 22.367 0.806 1.00 0.00 N ATOM 613 CA THR 78 30.802 23.012 -0.518 1.00 0.00 C ATOM 614 CB THR 78 30.005 24.329 -0.622 1.00 0.00 C ATOM 615 C THR 78 32.289 23.455 -0.416 1.00 0.00 C ATOM 616 O THR 78 32.811 23.996 0.558 1.00 0.00 O ATOM 617 OG1 THR 78 28.625 24.084 -0.392 1.00 0.00 O ATOM 618 CG2 THR 78 30.188 24.925 -2.028 1.00 0.00 C ATOM 619 N LEU 79 32.984 23.008 -1.453 1.00 0.00 N ATOM 620 CA LEU 79 34.401 23.228 -1.718 1.00 0.00 C ATOM 621 CB LEU 79 35.188 21.936 -1.982 1.00 0.00 C ATOM 622 C LEU 79 34.669 24.361 -2.527 1.00 0.00 C ATOM 623 O LEU 79 34.249 24.175 -3.668 1.00 0.00 O ATOM 624 CG LEU 79 36.669 22.173 -2.280 1.00 0.00 C ATOM 625 CD1 LEU 79 37.463 22.812 -1.142 1.00 0.00 C ATOM 626 CD2 LEU 79 37.471 20.915 -2.610 1.00 0.00 C ATOM 627 N GLU 80 35.273 25.497 -2.167 1.00 0.00 N ATOM 628 CA GLU 80 35.170 26.503 -3.486 1.00 0.00 C ATOM 629 CB GLU 80 34.641 27.827 -2.929 1.00 0.00 C ATOM 630 C GLU 80 36.612 26.764 -3.891 1.00 0.00 C ATOM 631 O GLU 80 37.455 26.795 -2.996 1.00 0.00 O ATOM 632 CG GLU 80 33.212 27.735 -2.392 1.00 0.00 C ATOM 633 CD GLU 80 32.794 29.123 -1.927 1.00 0.00 C ATOM 634 OE1 GLU 80 33.631 30.058 -2.032 1.00 0.00 O ATOM 635 OE2 GLU 80 31.632 29.266 -1.463 1.00 0.00 O ATOM 636 N ILE 81 36.924 26.899 -5.177 1.00 0.00 N ATOM 637 CA ILE 81 38.306 27.242 -5.500 1.00 0.00 C ATOM 638 CB ILE 81 38.913 26.185 -6.454 1.00 0.00 C ATOM 639 C ILE 81 38.232 28.505 -6.327 1.00 0.00 C ATOM 640 O ILE 81 37.523 28.580 -7.334 1.00 0.00 O ATOM 641 CG1 ILE 81 38.883 24.756 -5.886 1.00 0.00 C ATOM 642 CG2 ILE 81 40.388 26.448 -6.803 1.00 0.00 C ATOM 643 CD1 ILE 81 39.699 24.593 -4.604 1.00 0.00 C ATOM 644 N ASN 82 38.938 29.527 -5.842 1.00 0.00 N ATOM 645 CA ASN 82 38.994 30.840 -6.510 1.00 0.00 C ATOM 646 CB ASN 82 39.697 30.820 -7.869 1.00 0.00 C ATOM 647 C ASN 82 37.617 31.451 -6.753 1.00 0.00 C ATOM 648 O ASN 82 37.301 31.909 -7.861 1.00 0.00 O ATOM 649 CG ASN 82 40.038 32.255 -8.244 1.00 0.00 C ATOM 650 OD1 ASN 82 40.212 33.111 -7.378 1.00 0.00 O ATOM 651 ND2 ASN 82 40.152 32.595 -9.556 1.00 0.00 N ATOM 652 N GLY 83 36.795 31.424 -5.705 1.00 0.00 N ATOM 653 CA GLY 83 35.437 31.970 -5.793 1.00 0.00 C ATOM 654 C GLY 83 34.507 31.172 -6.628 1.00 0.00 C ATOM 655 O GLY 83 33.454 31.608 -7.118 1.00 0.00 O ATOM 656 N LYS 84 34.929 29.919 -6.797 1.00 0.00 N ATOM 657 CA LYS 84 34.025 29.034 -7.750 1.00 0.00 C ATOM 658 CB LYS 84 34.967 28.387 -8.779 1.00 0.00 C ATOM 659 C LYS 84 33.493 27.991 -6.963 1.00 0.00 C ATOM 660 O LYS 84 34.154 27.577 -6.002 1.00 0.00 O ATOM 661 CG LYS 84 35.634 29.396 -9.716 1.00 0.00 C ATOM 662 CD LYS 84 36.534 28.751 -10.771 1.00 0.00 C ATOM 663 CE LYS 84 37.179 29.759 -11.725 1.00 0.00 C ATOM 664 NZ LYS 84 38.006 29.051 -12.727 1.00 0.00 N ATOM 665 N SER 85 32.302 27.505 -7.279 1.00 0.00 N ATOM 666 CA SER 85 31.590 26.379 -6.539 1.00 0.00 C ATOM 667 CB SER 85 30.072 26.345 -6.651 1.00 0.00 C ATOM 668 C SER 85 31.827 24.995 -7.180 1.00 0.00 C ATOM 669 O SER 85 31.439 24.734 -8.320 1.00 0.00 O ATOM 670 OG SER 85 29.560 25.201 -5.983 1.00 0.00 O ATOM 671 N LEU 86 32.495 24.133 -6.423 1.00 0.00 N ATOM 672 CA LEU 86 32.770 22.780 -6.843 1.00 0.00 C ATOM 673 CB LEU 86 34.130 22.326 -6.304 1.00 0.00 C ATOM 674 C LEU 86 31.620 21.804 -6.717 1.00 0.00 C ATOM 675 O LEU 86 30.757 21.941 -5.838 1.00 0.00 O ATOM 676 CG LEU 86 35.303 23.153 -6.834 1.00 0.00 C ATOM 677 CD1 LEU 86 36.666 22.792 -6.243 1.00 0.00 C ATOM 678 CD2 LEU 86 35.534 23.056 -8.341 1.00 0.00 C ATOM 679 N LYS 87 31.583 20.830 -7.613 1.00 0.00 N ATOM 680 CA LYS 87 30.559 19.780 -7.582 1.00 0.00 C ATOM 681 CB LYS 87 30.468 19.285 -9.028 1.00 0.00 C ATOM 682 C LYS 87 30.912 18.520 -6.916 1.00 0.00 C ATOM 683 O LYS 87 31.965 17.956 -7.151 1.00 0.00 O ATOM 684 CG LYS 87 29.889 20.322 -9.992 1.00 0.00 C ATOM 685 CD LYS 87 29.867 19.857 -11.450 1.00 0.00 C ATOM 686 CE LYS 87 29.336 20.913 -12.421 1.00 0.00 C ATOM 687 NZ LYS 87 29.401 20.402 -13.809 1.00 0.00 N ATOM 688 N LYS 88 30.085 18.101 -5.974 1.00 0.00 N ATOM 689 CA LYS 88 30.303 16.862 -5.162 1.00 0.00 C ATOM 690 CB LYS 88 29.209 16.670 -4.100 1.00 0.00 C ATOM 691 C LYS 88 31.361 15.800 -5.676 1.00 0.00 C ATOM 692 O LYS 88 32.539 15.640 -5.370 1.00 0.00 O ATOM 693 CG LYS 88 29.436 15.451 -3.204 1.00 0.00 C ATOM 694 CD LYS 88 28.390 15.300 -2.098 1.00 0.00 C ATOM 695 CE LYS 88 28.606 14.071 -1.214 1.00 0.00 C ATOM 696 NZ LYS 88 27.559 14.008 -0.170 1.00 0.00 N ATOM 697 N TYR 89 30.741 15.024 -6.547 1.00 0.00 N ATOM 698 CA TYR 89 31.656 13.896 -7.116 1.00 0.00 C ATOM 699 CB TYR 89 31.062 12.502 -6.719 1.00 0.00 C ATOM 700 C TYR 89 31.577 13.997 -8.609 1.00 0.00 C ATOM 701 O TYR 89 32.351 13.230 -9.188 1.00 0.00 O ATOM 702 CG TYR 89 29.688 12.420 -7.289 1.00 0.00 C ATOM 703 CD1 TYR 89 29.507 11.983 -8.608 1.00 0.00 C ATOM 704 CD2 TYR 89 28.550 12.769 -6.530 1.00 0.00 C ATOM 705 CE1 TYR 89 28.223 11.891 -9.183 1.00 0.00 C ATOM 706 CE2 TYR 89 27.237 12.681 -7.098 1.00 0.00 C ATOM 707 CZ TYR 89 27.096 12.238 -8.430 1.00 0.00 C ATOM 708 OH TYR 89 25.855 12.141 -9.020 1.00 0.00 O ATOM 709 N MET 90 30.919 14.981 -9.237 1.00 0.00 N ATOM 710 CA MET 90 31.371 15.130 -10.700 1.00 0.00 C ATOM 711 CB MET 90 32.708 15.583 -11.276 1.00 0.00 C ATOM 712 C MET 90 30.168 14.313 -11.262 1.00 0.00 C ATOM 713 O MET 90 29.077 14.855 -11.083 1.00 0.00 O ATOM 714 CG MET 90 32.697 15.730 -12.799 1.00 0.00 C ATOM 715 SD MET 90 34.274 16.283 -13.514 1.00 0.00 S ATOM 716 CE MET 90 34.138 17.987 -12.901 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.14 53.9 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 64.86 63.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 77.93 46.3 108 100.0 108 ARMSMC BURIED . . . . . . . . 70.64 65.7 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.31 44.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 90.30 40.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 80.13 51.9 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 100.37 29.5 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 67.58 64.5 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.16 60.0 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 59.45 65.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 60.58 64.1 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 63.42 54.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 57.60 68.2 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 64.27 58.3 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 64.27 58.3 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 56.54 58.8 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 45.66 77.8 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 101.34 0.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.91 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 81.91 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 85.51 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 76.03 54.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 108.69 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.02 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.02 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0558 CRMSCA SECONDARY STRUCTURE . . 3.07 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.48 55 100.0 55 CRMSCA BURIED . . . . . . . . 4.20 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.10 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.22 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.58 269 100.0 269 CRMSMC BURIED . . . . . . . . 4.25 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.69 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.75 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.18 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.36 204 100.0 204 CRMSSC BURIED . . . . . . . . 5.66 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.88 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.31 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.41 424 100.0 424 CRMSALL BURIED . . . . . . . . 5.01 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.021 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.607 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.493 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 3.279 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.094 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.729 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.568 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 3.358 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.474 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.504 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.203 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.202 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 4.497 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.735 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.458 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.292 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.928 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 33 46 66 86 90 90 DISTCA CA (P) 3.33 36.67 51.11 73.33 95.56 90 DISTCA CA (RMS) 0.72 1.56 1.83 2.66 4.50 DISTCA ALL (N) 16 191 310 452 646 716 716 DISTALL ALL (P) 2.23 26.68 43.30 63.13 90.22 716 DISTALL ALL (RMS) 0.80 1.55 1.97 2.72 4.63 DISTALL END of the results output