####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS153_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS153_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 54 1 - 54 4.99 11.25 LONGEST_CONTINUOUS_SEGMENT: 54 2 - 55 4.79 11.28 LONGEST_CONTINUOUS_SEGMENT: 54 3 - 56 4.85 11.28 LCS_AVERAGE: 50.58 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 5 - 28 1.88 12.13 LCS_AVERAGE: 16.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 9 - 19 1.00 12.05 LONGEST_CONTINUOUS_SEGMENT: 11 29 - 39 0.74 12.23 LCS_AVERAGE: 8.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 9 54 4 4 5 6 9 10 11 11 13 13 17 21 25 32 38 41 47 52 55 60 LCS_GDT T 2 T 2 4 9 54 4 4 5 6 9 10 11 12 16 17 23 29 33 36 38 44 48 55 64 67 LCS_GDT D 3 D 3 4 9 54 4 4 5 6 10 18 26 31 33 39 45 51 54 56 58 60 63 65 67 70 LCS_GDT L 4 L 4 4 21 54 4 4 5 6 9 18 26 35 37 44 48 51 54 56 58 59 63 65 67 70 LCS_GDT V 5 V 5 8 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT A 6 A 6 8 24 54 8 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT V 7 V 7 8 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT W 8 W 8 8 24 54 5 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT D 9 D 9 11 24 54 5 12 19 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT V 10 V 10 11 24 54 5 12 16 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT A 11 A 11 11 24 54 5 12 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 69 LCS_GDT L 12 L 12 11 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT S 13 S 13 11 24 54 5 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 69 LCS_GDT D 14 D 14 11 24 54 5 6 10 18 28 33 35 38 43 46 49 52 55 56 58 60 63 65 67 69 LCS_GDT G 15 G 15 11 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 69 LCS_GDT V 16 V 16 11 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT H 17 H 17 11 24 54 5 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT K 18 K 18 11 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT I 19 I 19 11 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 20 E 20 9 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT F 21 F 21 9 24 54 9 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 22 E 22 9 24 54 9 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT H 23 H 23 9 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT G 24 G 24 9 24 54 6 8 14 22 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT T 25 T 25 9 24 54 6 8 13 16 23 28 32 36 39 41 44 52 55 56 58 60 63 65 67 70 LCS_GDT T 26 T 26 9 24 54 6 8 12 16 20 28 32 35 37 41 44 52 55 56 58 60 63 65 67 70 LCS_GDT S 27 S 27 9 24 54 6 8 10 20 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT G 28 G 28 9 24 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT K 29 K 29 11 17 54 6 14 19 20 27 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT R 30 R 30 11 17 54 9 14 19 21 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT V 31 V 31 11 17 54 9 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT V 32 V 32 11 17 54 8 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT Y 33 Y 33 11 16 54 9 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT V 34 V 34 11 16 54 9 14 19 20 27 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT D 35 D 35 11 16 54 9 14 19 20 23 29 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT G 36 G 36 11 16 54 9 14 19 20 23 30 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT K 37 K 37 11 16 54 9 14 19 23 27 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 38 E 38 11 16 54 6 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 39 E 39 11 16 54 5 12 19 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT I 40 I 40 9 16 54 5 7 13 22 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT R 41 R 41 9 16 54 5 7 9 16 21 31 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT K 42 K 42 3 16 54 3 5 9 20 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 43 E 43 3 15 54 3 6 10 13 15 21 26 34 40 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT W 44 W 44 3 4 54 3 3 4 4 4 8 10 12 22 31 36 41 51 56 58 60 62 65 67 70 LCS_GDT M 45 M 45 4 4 54 3 3 4 6 6 7 13 15 17 21 31 37 47 56 58 59 62 65 67 70 LCS_GDT F 46 F 46 4 4 54 3 3 4 6 6 11 13 15 18 24 33 39 47 56 58 60 63 65 67 70 LCS_GDT K 47 K 47 4 5 54 3 4 4 6 8 11 13 25 29 35 39 47 52 56 58 60 63 65 67 70 LCS_GDT L 48 L 48 4 5 54 3 4 4 6 8 11 15 21 27 32 37 42 52 56 58 60 63 65 67 70 LCS_GDT V 49 V 49 4 5 54 3 6 9 11 12 21 27 34 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT G 50 G 50 5 10 54 8 14 19 20 23 31 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT K 51 K 51 5 10 54 4 5 6 10 20 28 35 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT E 52 E 52 6 10 54 4 5 6 9 15 18 20 21 23 37 44 52 55 56 58 60 63 65 67 70 LCS_GDT T 53 T 53 6 10 54 4 5 6 8 14 22 32 36 40 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT F 54 F 54 6 10 54 3 5 6 8 15 18 20 21 25 43 48 52 55 56 58 60 63 65 67 70 LCS_GDT Y 55 Y 55 6 10 54 3 4 6 7 13 17 20 21 25 39 47 52 55 56 58 60 63 65 67 70 LCS_GDT V 56 V 56 6 14 54 3 4 8 9 15 18 20 21 24 27 29 32 37 42 45 57 62 64 67 70 LCS_GDT G 57 G 57 6 14 39 3 4 6 9 15 18 20 21 24 27 29 32 37 42 47 57 62 64 67 70 LCS_GDT A 58 A 58 4 14 39 3 3 5 8 15 18 20 21 24 27 29 32 37 42 45 57 62 64 67 70 LCS_GDT A 59 A 59 4 14 39 3 4 6 9 15 18 20 21 24 27 29 32 37 42 53 57 62 64 67 70 LCS_GDT K 60 K 60 3 14 39 3 3 5 9 12 13 16 21 24 27 29 32 46 55 57 60 63 65 67 70 LCS_GDT T 61 T 61 9 14 39 3 8 9 11 15 18 20 21 25 36 45 51 55 56 58 60 63 65 67 70 LCS_GDT K 62 K 62 9 14 39 4 8 9 11 14 18 20 24 39 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT A 63 A 63 9 14 39 4 8 9 11 15 18 20 31 39 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT T 64 T 64 9 14 39 4 8 9 11 15 18 22 34 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT I 65 I 65 9 14 39 4 8 9 11 15 18 24 34 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT N 66 N 66 9 14 39 4 8 9 13 19 22 31 38 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT I 67 I 67 9 14 39 4 8 9 11 15 22 27 37 43 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT D 68 D 68 9 14 39 4 8 9 11 15 21 25 34 42 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT A 69 A 69 9 14 39 3 6 9 11 15 18 20 24 27 33 46 52 55 56 58 60 63 65 67 70 LCS_GDT I 70 I 70 3 11 39 2 4 6 11 11 18 24 34 42 48 49 52 55 56 58 60 63 65 67 70 LCS_GDT S 71 S 71 3 11 39 3 3 4 4 7 11 13 18 23 29 34 38 44 52 58 60 63 65 67 70 LCS_GDT G 72 G 72 3 9 39 3 3 4 8 9 10 10 13 16 23 29 32 37 42 45 51 55 61 67 70 LCS_GDT F 73 F 73 8 9 39 5 8 9 9 9 10 10 13 17 21 23 32 37 42 45 51 55 59 67 70 LCS_GDT A 74 A 74 8 9 39 4 7 9 9 9 10 10 13 17 21 23 32 37 42 45 51 55 59 67 70 LCS_GDT Y 75 Y 75 8 9 39 5 8 9 9 9 11 13 15 17 21 23 32 37 42 45 52 56 61 67 70 LCS_GDT E 76 E 76 8 9 39 4 8 9 9 9 11 13 15 17 21 23 32 37 42 45 51 56 59 67 70 LCS_GDT Y 77 Y 77 8 9 39 5 8 9 10 12 13 15 17 18 21 23 32 37 42 45 51 56 61 67 70 LCS_GDT T 78 T 78 8 9 39 5 8 9 10 12 13 15 17 18 21 23 29 37 42 45 52 56 61 67 70 LCS_GDT L 79 L 79 8 9 39 5 8 9 9 9 10 12 12 17 21 23 28 37 42 45 51 55 61 67 70 LCS_GDT E 80 E 80 8 9 22 6 8 9 9 12 13 15 17 18 19 22 27 36 42 45 52 56 61 67 70 LCS_GDT I 81 I 81 7 9 17 6 7 8 8 9 13 15 17 23 25 29 32 40 44 49 54 57 61 67 70 LCS_GDT N 82 N 82 7 9 17 6 7 8 8 9 11 15 17 18 19 21 24 34 41 44 52 56 59 67 67 LCS_GDT G 83 G 83 7 9 17 6 8 9 10 12 13 15 17 18 19 21 24 27 29 36 43 46 50 58 65 LCS_GDT K 84 K 84 7 9 17 6 7 8 10 12 13 15 17 18 19 21 24 30 32 36 41 46 50 55 65 LCS_GDT S 85 S 85 7 9 17 6 7 8 10 12 13 15 17 18 19 21 25 34 41 44 47 51 56 59 66 LCS_GDT L 86 L 86 4 9 17 2 3 6 10 12 13 15 17 18 19 21 29 36 42 45 51 53 59 67 68 LCS_GDT K 87 K 87 3 9 17 0 3 4 5 7 9 12 12 16 18 19 23 27 29 31 35 40 49 52 57 LCS_GDT K 88 K 88 3 3 16 0 3 3 3 3 4 5 6 6 11 17 18 23 24 26 29 29 32 36 39 LCS_GDT Y 89 Y 89 3 3 12 0 3 3 3 3 4 5 6 6 8 9 9 16 18 18 21 27 31 34 38 LCS_GDT M 90 M 90 3 3 7 0 3 3 3 3 4 4 4 4 7 12 15 16 18 18 21 29 31 34 38 LCS_AVERAGE LCS_A: 25.11 ( 8.40 16.36 50.58 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 20 23 28 33 35 38 43 48 49 52 55 56 58 60 63 65 67 70 GDT PERCENT_AT 10.00 15.56 22.22 25.56 31.11 36.67 38.89 42.22 47.78 53.33 54.44 57.78 61.11 62.22 64.44 66.67 70.00 72.22 74.44 77.78 GDT RMS_LOCAL 0.32 0.66 0.91 1.07 1.59 1.89 2.10 2.29 2.95 3.43 3.45 3.76 4.01 4.12 4.24 4.68 4.87 5.08 5.56 6.56 GDT RMS_ALL_AT 11.61 12.25 12.39 12.27 12.01 11.96 11.80 11.80 11.15 10.77 10.85 10.85 10.92 10.82 10.81 10.55 10.54 10.52 10.40 9.42 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: F 21 F 21 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 14.989 0 0.276 1.003 17.827 0.000 0.000 LGA T 2 T 2 13.497 0 0.023 0.061 18.234 0.119 0.068 LGA D 3 D 3 7.443 0 0.039 1.077 9.850 12.262 7.500 LGA L 4 L 4 6.028 0 0.117 1.422 10.990 32.619 17.381 LGA V 5 V 5 1.749 0 0.643 0.981 5.721 61.190 46.395 LGA A 6 A 6 2.160 0 0.121 0.164 2.896 72.976 69.810 LGA V 7 V 7 0.719 0 0.053 0.050 1.281 90.595 89.252 LGA W 8 W 8 0.594 0 0.011 1.140 7.398 88.333 56.327 LGA D 9 D 9 1.988 0 0.054 0.289 2.869 67.143 65.000 LGA V 10 V 10 2.929 0 0.236 1.120 4.038 55.357 52.245 LGA A 11 A 11 2.651 0 0.055 0.070 3.418 59.048 57.238 LGA L 12 L 12 1.123 0 0.023 0.079 2.762 79.286 75.298 LGA S 13 S 13 1.300 0 0.056 0.623 3.256 71.667 71.190 LGA D 14 D 14 3.064 0 0.178 1.202 8.230 59.167 36.667 LGA G 15 G 15 0.977 0 0.065 0.065 1.564 81.548 81.548 LGA V 16 V 16 1.651 0 0.100 1.180 4.135 79.286 67.211 LGA H 17 H 17 1.516 0 0.203 1.144 6.166 72.976 55.048 LGA K 18 K 18 0.666 0 0.034 0.865 2.381 95.238 86.772 LGA I 19 I 19 0.633 0 0.062 0.136 1.818 95.238 88.393 LGA E 20 E 20 0.847 0 0.066 0.511 2.148 88.214 85.608 LGA F 21 F 21 1.385 0 0.048 1.198 7.049 77.143 52.424 LGA E 22 E 22 1.785 0 0.092 0.853 3.044 72.857 74.286 LGA H 23 H 23 1.729 0 0.057 0.279 5.079 68.929 52.905 LGA G 24 G 24 2.631 0 0.050 0.050 3.152 63.333 63.333 LGA T 25 T 25 5.821 0 0.039 0.070 8.430 20.833 14.626 LGA T 26 T 26 6.306 0 0.044 0.140 9.355 25.357 16.735 LGA S 27 S 27 2.883 0 0.070 0.083 3.973 68.095 59.841 LGA G 28 G 28 1.479 0 0.029 0.029 2.683 75.357 75.357 LGA K 29 K 29 2.619 0 0.089 1.109 11.656 77.857 42.275 LGA R 30 R 30 2.400 0 0.048 1.416 10.056 60.952 34.069 LGA V 31 V 31 1.812 0 0.040 0.142 2.269 72.857 69.388 LGA V 32 V 32 1.760 0 0.061 0.112 2.149 70.833 70.544 LGA Y 33 Y 33 1.951 0 0.019 0.237 2.253 68.810 69.484 LGA V 34 V 34 2.810 0 0.056 0.064 3.211 57.262 56.190 LGA D 35 D 35 3.859 0 0.033 0.239 4.863 43.452 38.869 LGA G 36 G 36 3.416 0 0.099 0.099 3.416 50.000 50.000 LGA K 37 K 37 2.797 0 0.075 0.874 7.020 59.167 42.487 LGA E 38 E 38 1.362 0 0.110 0.546 2.638 77.143 74.921 LGA E 39 E 39 1.561 0 0.057 0.986 2.671 72.976 72.169 LGA I 40 I 40 2.111 0 0.056 0.147 3.184 66.786 61.131 LGA R 41 R 41 3.842 0 0.039 0.876 14.749 50.119 21.991 LGA K 42 K 42 2.479 0 0.629 0.938 10.825 50.595 35.079 LGA E 43 E 43 6.771 0 0.086 1.267 12.410 12.024 6.138 LGA W 44 W 44 11.362 0 0.627 1.315 20.500 0.357 0.102 LGA M 45 M 45 11.015 0 0.643 0.944 11.936 0.000 0.179 LGA F 46 F 46 10.575 0 0.023 1.297 11.413 0.000 0.043 LGA K 47 K 47 9.887 0 0.645 1.008 10.130 0.238 3.228 LGA L 48 L 48 11.247 0 0.104 0.227 16.827 1.071 0.536 LGA V 49 V 49 6.463 0 0.184 1.155 8.889 22.619 17.687 LGA G 50 G 50 3.893 0 0.661 0.661 4.420 40.238 40.238 LGA K 51 K 51 3.946 0 0.067 0.885 6.843 39.048 38.571 LGA E 52 E 52 7.125 0 0.128 1.139 14.595 12.857 5.767 LGA T 53 T 53 4.774 0 0.019 0.078 5.125 28.810 35.238 LGA F 54 F 54 7.030 0 0.118 0.213 16.125 9.762 3.593 LGA Y 55 Y 55 8.102 0 0.029 1.282 9.670 4.167 13.929 LGA V 56 V 56 13.482 0 0.084 0.085 17.865 0.000 0.000 LGA G 57 G 57 13.691 0 0.603 0.603 13.691 0.000 0.000 LGA A 58 A 58 14.186 0 0.611 0.594 14.228 0.000 0.000 LGA A 59 A 59 14.130 0 0.132 0.140 15.806 0.000 0.000 LGA K 60 K 60 11.161 0 0.266 0.804 18.537 1.310 0.582 LGA T 61 T 61 9.968 0 0.051 0.051 11.992 0.238 0.136 LGA K 62 K 62 7.863 0 0.045 0.761 10.582 5.952 3.915 LGA A 63 A 63 7.836 0 0.094 0.086 8.101 9.405 8.476 LGA T 64 T 64 7.192 0 0.063 0.074 7.549 8.571 9.184 LGA I 65 I 65 7.196 0 0.061 0.114 8.464 11.667 8.810 LGA N 66 N 66 6.179 0 0.042 1.029 7.147 13.452 16.369 LGA I 67 I 67 6.595 0 0.043 0.106 6.831 15.238 15.714 LGA D 68 D 68 7.123 0 0.288 1.030 7.524 9.286 15.119 LGA A 69 A 69 8.336 0 0.652 0.602 8.995 6.548 5.810 LGA I 70 I 70 7.147 0 0.590 1.439 9.195 5.000 10.417 LGA S 71 S 71 12.994 0 0.637 0.567 14.439 0.000 0.000 LGA G 72 G 72 16.154 0 0.030 0.030 17.921 0.000 0.000 LGA F 73 F 73 18.894 0 0.557 1.286 23.963 0.000 0.000 LGA A 74 A 74 17.820 0 0.132 0.161 18.968 0.000 0.000 LGA Y 75 Y 75 17.572 0 0.093 0.215 21.522 0.000 0.000 LGA E 76 E 76 17.824 0 0.146 0.808 21.790 0.000 0.000 LGA Y 77 Y 77 17.605 0 0.102 1.278 21.202 0.000 0.000 LGA T 78 T 78 17.953 0 0.056 0.081 19.372 0.000 0.000 LGA L 79 L 79 17.942 0 0.601 1.392 19.195 0.000 0.000 LGA E 80 E 80 18.148 0 0.072 0.851 22.528 0.000 0.000 LGA I 81 I 81 15.815 0 0.079 0.086 19.170 0.000 0.000 LGA N 82 N 82 19.885 0 0.056 0.066 23.542 0.000 0.000 LGA G 83 G 83 24.136 0 0.077 0.077 26.385 0.000 0.000 LGA K 84 K 84 23.889 0 0.026 0.664 28.138 0.000 0.000 LGA S 85 S 85 22.753 0 0.015 0.013 25.440 0.000 0.000 LGA L 86 L 86 21.386 0 0.616 0.524 22.481 0.000 0.000 LGA K 87 K 87 26.065 0 0.617 1.233 30.627 0.000 0.000 LGA K 88 K 88 30.511 0 0.618 1.226 33.720 0.000 0.000 LGA Y 89 Y 89 31.794 0 0.605 1.338 32.831 0.000 0.000 LGA M 90 M 90 31.810 0 0.310 1.315 35.420 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 9.134 9.119 9.928 31.898 27.965 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 38 2.29 37.500 34.304 1.591 LGA_LOCAL RMSD: 2.289 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.799 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 9.134 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.614762 * X + 0.386437 * Y + -0.687557 * Z + 26.847012 Y_new = -0.784960 * X + 0.214838 * Y + -0.581105 * Z + 18.947592 Z_new = -0.076847 * X + 0.896945 * Y + 0.435412 * Z + 4.597137 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.906398 0.076923 1.118866 [DEG: -51.9328 4.4073 64.1063 ] ZXZ: -0.869111 1.120301 -0.085467 [DEG: -49.7964 64.1885 -4.8969 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS153_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS153_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 38 2.29 34.304 9.13 REMARK ---------------------------------------------------------- MOLECULE T0540TS153_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 26.847 18.948 4.597 1.00 0.00 N ATOM 2 CA MET 1 27.743 17.803 4.485 1.00 0.00 C ATOM 3 C MET 1 28.631 17.676 5.716 1.00 0.00 C ATOM 4 O MET 1 29.636 16.967 5.698 1.00 0.00 O ATOM 5 CB MET 1 28.600 17.925 3.226 1.00 0.00 C ATOM 6 CG MET 1 27.809 17.949 1.927 1.00 0.00 C ATOM 7 SD MET 1 26.899 16.418 1.639 1.00 0.00 S ATOM 8 CE MET 1 28.246 15.269 1.371 1.00 0.00 C ATOM 9 N THR 2 28.252 18.367 6.788 1.00 0.00 N ATOM 10 CA THR 2 29.115 18.504 7.954 1.00 0.00 C ATOM 11 C THR 2 29.301 17.168 8.661 1.00 0.00 C ATOM 12 O THR 2 30.298 16.954 9.351 1.00 0.00 O ATOM 13 CB THR 2 28.551 19.529 8.956 1.00 0.00 C ATOM 14 OG1 THR 2 27.252 19.110 9.393 1.00 0.00 O ATOM 15 CG2 THR 2 28.446 20.904 8.311 1.00 0.00 C ATOM 16 N ASP 3 28.334 16.272 8.487 1.00 0.00 N ATOM 17 CA ASP 3 28.391 14.955 9.109 1.00 0.00 C ATOM 18 C ASP 3 28.454 13.852 8.061 1.00 0.00 C ATOM 19 O ASP 3 28.129 12.698 8.339 1.00 0.00 O ATOM 20 CB ASP 3 27.184 14.741 10.024 1.00 0.00 C ATOM 21 CG ASP 3 27.117 15.692 11.212 1.00 0.00 C ATOM 22 OD1 ASP 3 28.079 15.773 11.938 1.00 0.00 O ATOM 23 OD2 ASP 3 26.175 16.443 11.293 1.00 0.00 O ATOM 24 N LEU 4 28.879 14.215 6.854 1.00 0.00 N ATOM 25 CA LEU 4 28.894 13.280 5.735 1.00 0.00 C ATOM 26 C LEU 4 30.283 13.180 5.120 1.00 0.00 C ATOM 27 O LEU 4 31.073 14.121 5.187 1.00 0.00 O ATOM 28 CB LEU 4 27.871 13.706 4.675 1.00 0.00 C ATOM 29 CG LEU 4 26.411 13.723 5.146 1.00 0.00 C ATOM 30 CD1 LEU 4 25.518 14.300 4.056 1.00 0.00 C ATOM 31 CD2 LEU 4 25.976 12.310 5.507 1.00 0.00 C ATOM 32 N VAL 5 30.580 12.029 4.522 1.00 0.00 N ATOM 33 CA VAL 5 31.869 11.809 3.879 1.00 0.00 C ATOM 34 C VAL 5 31.748 11.885 2.364 1.00 0.00 C ATOM 35 O VAL 5 30.894 11.230 1.765 1.00 0.00 O ATOM 36 CB VAL 5 32.469 10.444 4.269 1.00 0.00 C ATOM 37 CG1 VAL 5 33.804 10.231 3.571 1.00 0.00 C ATOM 38 CG2 VAL 5 32.637 10.347 5.777 1.00 0.00 C ATOM 39 N ALA 6 32.607 12.690 1.745 1.00 0.00 N ATOM 40 CA ALA 6 32.524 12.943 0.312 1.00 0.00 C ATOM 41 C ALA 6 33.880 13.344 -0.255 1.00 0.00 C ATOM 42 O ALA 6 34.840 13.543 0.489 1.00 0.00 O ATOM 43 CB ALA 6 31.487 14.016 0.022 1.00 0.00 C ATOM 44 N VAL 7 33.953 13.458 -1.577 1.00 0.00 N ATOM 45 CA VAL 7 35.186 13.860 -2.245 1.00 0.00 C ATOM 46 C VAL 7 34.933 14.990 -3.235 1.00 0.00 C ATOM 47 O VAL 7 33.933 14.987 -3.952 1.00 0.00 O ATOM 48 CB VAL 7 35.838 12.679 -2.987 1.00 0.00 C ATOM 49 CG1 VAL 7 37.106 13.129 -3.695 1.00 0.00 C ATOM 50 CG2 VAL 7 36.143 11.545 -2.019 1.00 0.00 C ATOM 51 N TRP 8 35.843 15.958 -3.266 1.00 0.00 N ATOM 52 CA TRP 8 35.694 17.122 -4.130 1.00 0.00 C ATOM 53 C TRP 8 36.973 17.396 -4.910 1.00 0.00 C ATOM 54 O TRP 8 38.071 17.355 -4.356 1.00 0.00 O ATOM 55 CB TRP 8 35.309 18.352 -3.306 1.00 0.00 C ATOM 56 CG TRP 8 35.057 19.573 -4.136 1.00 0.00 C ATOM 57 CD1 TRP 8 35.901 20.629 -4.312 1.00 0.00 C ATOM 58 CD2 TRP 8 33.882 19.866 -4.904 1.00 0.00 C ATOM 59 NE1 TRP 8 35.327 21.561 -5.140 1.00 0.00 N ATOM 60 CE2 TRP 8 34.086 21.115 -5.517 1.00 0.00 C ATOM 61 CE3 TRP 8 32.678 19.191 -5.131 1.00 0.00 C ATOM 62 CZ2 TRP 8 33.137 21.703 -6.338 1.00 0.00 C ATOM 63 CZ3 TRP 8 31.726 19.780 -5.956 1.00 0.00 C ATOM 64 CH2 TRP 8 31.949 21.000 -6.542 1.00 0.00 H ATOM 65 N ASP 9 36.824 17.677 -6.201 1.00 0.00 N ATOM 66 CA ASP 9 37.960 18.033 -7.044 1.00 0.00 C ATOM 67 C ASP 9 38.016 19.536 -7.285 1.00 0.00 C ATOM 68 O ASP 9 37.009 20.160 -7.618 1.00 0.00 O ATOM 69 CB ASP 9 37.891 17.288 -8.379 1.00 0.00 C ATOM 70 CG ASP 9 38.148 15.791 -8.280 1.00 0.00 C ATOM 71 OD1 ASP 9 38.610 15.355 -7.252 1.00 0.00 O ATOM 72 OD2 ASP 9 37.737 15.078 -9.164 1.00 0.00 O ATOM 73 N VAL 10 39.202 20.113 -7.116 1.00 0.00 N ATOM 74 CA VAL 10 39.402 21.535 -7.353 1.00 0.00 C ATOM 75 C VAL 10 40.266 21.774 -8.585 1.00 0.00 C ATOM 76 O VAL 10 41.444 21.410 -8.609 1.00 0.00 O ATOM 77 CB VAL 10 40.053 22.224 -6.140 1.00 0.00 C ATOM 78 CG1 VAL 10 40.281 23.701 -6.423 1.00 0.00 C ATOM 79 CG2 VAL 10 39.190 22.048 -4.900 1.00 0.00 C ATOM 80 N ALA 11 39.678 22.385 -9.606 1.00 0.00 N ATOM 81 CA ALA 11 40.387 22.655 -10.851 1.00 0.00 C ATOM 82 C ALA 11 41.476 23.703 -10.650 1.00 0.00 C ATOM 83 O ALA 11 41.222 24.776 -10.102 1.00 0.00 O ATOM 84 CB ALA 11 39.412 23.100 -11.932 1.00 0.00 C ATOM 85 N LEU 12 42.686 23.383 -11.095 1.00 0.00 N ATOM 86 CA LEU 12 43.790 24.334 -11.054 1.00 0.00 C ATOM 87 C LEU 12 44.213 24.746 -12.458 1.00 0.00 C ATOM 88 O LEU 12 43.727 24.200 -13.449 1.00 0.00 O ATOM 89 CB LEU 12 44.978 23.734 -10.293 1.00 0.00 C ATOM 90 CG LEU 12 44.678 23.301 -8.852 1.00 0.00 C ATOM 91 CD1 LEU 12 45.896 22.611 -8.250 1.00 0.00 C ATOM 92 CD2 LEU 12 44.287 24.518 -8.027 1.00 0.00 C ATOM 93 N SER 13 45.120 25.714 -12.537 1.00 0.00 N ATOM 94 CA SER 13 45.539 26.269 -13.820 1.00 0.00 C ATOM 95 C SER 13 45.924 25.168 -14.798 1.00 0.00 C ATOM 96 O SER 13 45.515 25.185 -15.959 1.00 0.00 O ATOM 97 CB SER 13 46.695 27.228 -13.620 1.00 0.00 C ATOM 98 OG SER 13 47.133 27.783 -14.830 1.00 0.00 O ATOM 99 N ASP 14 46.713 24.211 -14.321 1.00 0.00 N ATOM 100 CA ASP 14 47.230 23.147 -15.177 1.00 0.00 C ATOM 101 C ASP 14 47.229 21.808 -14.452 1.00 0.00 C ATOM 102 O ASP 14 48.214 21.070 -14.492 1.00 0.00 O ATOM 103 CB ASP 14 48.645 23.484 -15.657 1.00 0.00 C ATOM 104 CG ASP 14 49.114 22.667 -16.853 1.00 0.00 C ATOM 105 OD1 ASP 14 48.289 22.059 -17.493 1.00 0.00 O ATOM 106 OD2 ASP 14 50.262 22.782 -17.212 1.00 0.00 O ATOM 107 N GLY 15 46.119 21.499 -13.792 1.00 0.00 N ATOM 108 CA GLY 15 45.977 20.234 -13.081 1.00 0.00 C ATOM 109 C GLY 15 44.705 20.212 -12.243 1.00 0.00 C ATOM 110 O GLY 15 43.971 21.200 -12.183 1.00 0.00 O ATOM 111 N VAL 16 44.446 19.080 -11.598 1.00 0.00 N ATOM 112 CA VAL 16 43.303 18.951 -10.705 1.00 0.00 C ATOM 113 C VAL 16 43.732 18.470 -9.325 1.00 0.00 C ATOM 114 O VAL 16 44.474 17.495 -9.199 1.00 0.00 O ATOM 115 CB VAL 16 42.250 17.979 -11.271 1.00 0.00 C ATOM 116 CG1 VAL 16 41.091 17.823 -10.299 1.00 0.00 C ATOM 117 CG2 VAL 16 41.748 18.466 -12.622 1.00 0.00 C ATOM 118 N HIS 17 43.261 19.158 -8.290 1.00 0.00 N ATOM 119 CA HIS 17 43.578 18.790 -6.917 1.00 0.00 C ATOM 120 C HIS 17 42.431 18.016 -6.276 1.00 0.00 C ATOM 121 O HIS 17 41.366 18.571 -6.012 1.00 0.00 O ATOM 122 CB HIS 17 43.901 20.034 -6.083 1.00 0.00 C ATOM 123 CG HIS 17 44.337 19.725 -4.685 1.00 0.00 C ATOM 124 ND1 HIS 17 44.467 20.697 -3.714 1.00 0.00 N ATOM 125 CD2 HIS 17 44.674 18.554 -4.094 1.00 0.00 C ATOM 126 CE1 HIS 17 44.865 20.136 -2.586 1.00 0.00 C ATOM 127 NE2 HIS 17 44.998 18.837 -2.790 1.00 0.00 N ATOM 128 N LYS 18 42.659 16.731 -6.028 1.00 0.00 N ATOM 129 CA LYS 18 41.658 15.888 -5.384 1.00 0.00 C ATOM 130 C LYS 18 41.723 16.013 -3.869 1.00 0.00 C ATOM 131 O LYS 18 42.781 15.831 -3.265 1.00 0.00 O ATOM 132 CB LYS 18 41.842 14.427 -5.798 1.00 0.00 C ATOM 133 CG LYS 18 40.829 13.467 -5.188 1.00 0.00 C ATOM 134 CD LYS 18 41.077 12.037 -5.644 1.00 0.00 C ATOM 135 CE LYS 18 40.082 11.074 -5.011 1.00 0.00 C ATOM 136 NZ LYS 18 40.318 9.669 -5.443 1.00 0.00 N ATOM 137 N ILE 19 40.586 16.329 -3.256 1.00 0.00 N ATOM 138 CA ILE 19 40.528 16.548 -1.816 1.00 0.00 C ATOM 139 C ILE 19 39.407 15.735 -1.181 1.00 0.00 C ATOM 140 O ILE 19 38.254 15.812 -1.604 1.00 0.00 O ATOM 141 CB ILE 19 40.324 18.036 -1.478 1.00 0.00 C ATOM 142 CG1 ILE 19 41.428 18.884 -2.119 1.00 0.00 C ATOM 143 CG2 ILE 19 40.300 18.241 0.029 1.00 0.00 C ATOM 144 CD1 ILE 19 41.205 20.373 -1.990 1.00 0.00 C ATOM 145 N GLU 20 39.753 14.955 -0.163 1.00 0.00 N ATOM 146 CA GLU 20 38.787 14.082 0.496 1.00 0.00 C ATOM 147 C GLU 20 38.282 14.701 1.794 1.00 0.00 C ATOM 148 O GLU 20 39.070 15.148 2.627 1.00 0.00 O ATOM 149 CB GLU 20 39.406 12.710 0.774 1.00 0.00 C ATOM 150 CG GLU 20 39.773 11.922 -0.475 1.00 0.00 C ATOM 151 CD GLU 20 40.407 10.604 -0.122 1.00 0.00 C ATOM 152 OE1 GLU 20 40.580 10.343 1.045 1.00 0.00 O ATOM 153 OE2 GLU 20 40.617 9.813 -1.011 1.00 0.00 O ATOM 154 N PHE 21 36.963 14.724 1.957 1.00 0.00 N ATOM 155 CA PHE 21 36.348 15.334 3.131 1.00 0.00 C ATOM 156 C PHE 21 35.609 14.295 3.966 1.00 0.00 C ATOM 157 O PHE 21 34.903 13.442 3.429 1.00 0.00 O ATOM 158 CB PHE 21 35.391 16.451 2.714 1.00 0.00 C ATOM 159 CG PHE 21 36.072 17.625 2.069 1.00 0.00 C ATOM 160 CD1 PHE 21 36.340 17.626 0.708 1.00 0.00 C ATOM 161 CD2 PHE 21 36.450 18.727 2.822 1.00 0.00 C ATOM 162 CE1 PHE 21 36.968 18.706 0.114 1.00 0.00 C ATOM 163 CE2 PHE 21 37.076 19.805 2.231 1.00 0.00 C ATOM 164 CZ PHE 21 37.335 19.796 0.874 1.00 0.00 C ATOM 165 N GLU 22 35.776 14.374 5.281 1.00 0.00 N ATOM 166 CA GLU 22 35.068 13.490 6.198 1.00 0.00 C ATOM 167 C GLU 22 34.820 14.168 7.539 1.00 0.00 C ATOM 168 O GLU 22 35.444 15.182 7.856 1.00 0.00 O ATOM 169 CB GLU 22 35.852 12.192 6.403 1.00 0.00 C ATOM 170 CG GLU 22 37.213 12.377 7.060 1.00 0.00 C ATOM 171 CD GLU 22 37.951 11.071 7.164 1.00 0.00 C ATOM 172 OE1 GLU 22 38.159 10.446 6.153 1.00 0.00 O ATOM 173 OE2 GLU 22 38.406 10.752 8.237 1.00 0.00 O ATOM 174 N HIS 23 33.906 13.607 8.322 1.00 0.00 N ATOM 175 CA HIS 23 33.563 14.167 9.624 1.00 0.00 C ATOM 176 C HIS 23 34.349 13.491 10.741 1.00 0.00 C ATOM 177 O HIS 23 34.376 12.264 10.837 1.00 0.00 O ATOM 178 CB HIS 23 32.060 14.038 9.889 1.00 0.00 C ATOM 179 CG HIS 23 31.635 14.572 11.222 1.00 0.00 C ATOM 180 ND1 HIS 23 31.687 15.914 11.535 1.00 0.00 N ATOM 181 CD2 HIS 23 31.154 13.946 12.320 1.00 0.00 C ATOM 182 CE1 HIS 23 31.254 16.090 12.772 1.00 0.00 C ATOM 183 NE2 HIS 23 30.924 14.912 13.269 1.00 0.00 N ATOM 184 N GLY 24 34.985 14.298 11.582 1.00 0.00 N ATOM 185 CA GLY 24 35.677 13.783 12.758 1.00 0.00 C ATOM 186 C GLY 24 34.692 13.357 13.838 1.00 0.00 C ATOM 187 O GLY 24 33.804 14.121 14.218 1.00 0.00 O ATOM 188 N THR 25 34.852 12.133 14.328 1.00 0.00 N ATOM 189 CA THR 25 33.922 11.569 15.299 1.00 0.00 C ATOM 190 C THR 25 34.382 11.842 16.725 1.00 0.00 C ATOM 191 O THR 25 33.613 11.693 17.675 1.00 0.00 O ATOM 192 CB THR 25 33.756 10.050 15.106 1.00 0.00 C ATOM 193 OG1 THR 25 35.016 9.399 15.310 1.00 0.00 O ATOM 194 CG2 THR 25 33.250 9.742 13.705 1.00 0.00 C ATOM 195 N THR 26 35.641 12.242 16.869 1.00 0.00 N ATOM 196 CA THR 26 36.220 12.486 18.183 1.00 0.00 C ATOM 197 C THR 26 36.106 13.955 18.572 1.00 0.00 C ATOM 198 O THR 26 35.622 14.285 19.654 1.00 0.00 O ATOM 199 CB THR 26 37.701 12.066 18.235 1.00 0.00 C ATOM 200 OG1 THR 26 37.812 10.663 17.963 1.00 0.00 O ATOM 201 CG2 THR 26 38.292 12.362 19.605 1.00 0.00 C ATOM 202 N SER 27 36.556 14.833 17.683 1.00 0.00 N ATOM 203 CA SER 27 36.551 16.267 17.951 1.00 0.00 C ATOM 204 C SER 27 35.256 16.912 17.475 1.00 0.00 C ATOM 205 O SER 27 34.852 17.960 17.978 1.00 0.00 O ATOM 206 CB SER 27 37.744 16.926 17.287 1.00 0.00 C ATOM 207 OG SER 27 37.664 16.876 15.890 1.00 0.00 O ATOM 208 N GLY 28 34.609 16.280 16.502 1.00 0.00 N ATOM 209 CA GLY 28 33.424 16.850 15.872 1.00 0.00 C ATOM 210 C GLY 28 33.803 17.874 14.810 1.00 0.00 C ATOM 211 O GLY 28 32.942 18.563 14.263 1.00 0.00 O ATOM 212 N LYS 29 35.098 17.966 14.520 1.00 0.00 N ATOM 213 CA LYS 29 35.591 18.892 13.508 1.00 0.00 C ATOM 214 C LYS 29 35.610 18.244 12.130 1.00 0.00 C ATOM 215 O LYS 29 35.582 17.019 12.009 1.00 0.00 O ATOM 216 CB LYS 29 36.990 19.389 13.876 1.00 0.00 C ATOM 217 CG LYS 29 37.042 20.255 15.128 1.00 0.00 C ATOM 218 CD LYS 29 38.463 20.708 15.428 1.00 0.00 C ATOM 219 CE LYS 29 38.514 21.584 16.672 1.00 0.00 C ATOM 220 NZ LYS 29 39.901 22.016 16.992 1.00 0.00 N ATOM 221 N ARG 30 35.659 19.072 11.092 1.00 0.00 N ATOM 222 CA ARG 30 35.754 18.579 9.724 1.00 0.00 C ATOM 223 C ARG 30 37.186 18.200 9.373 1.00 0.00 C ATOM 224 O ARG 30 38.104 19.011 9.504 1.00 0.00 O ATOM 225 CB ARG 30 35.177 19.565 8.717 1.00 0.00 C ATOM 226 CG ARG 30 33.667 19.733 8.781 1.00 0.00 C ATOM 227 CD ARG 30 32.898 18.544 8.334 1.00 0.00 C ATOM 228 NE ARG 30 32.990 18.269 6.908 1.00 0.00 N ATOM 229 CZ ARG 30 32.552 17.140 6.317 1.00 0.00 C ATOM 230 NH1 ARG 30 32.030 16.163 7.026 1.00 0.00 H ATOM 231 NH2 ARG 30 32.686 17.029 5.007 1.00 0.00 H ATOM 232 N VAL 31 37.374 16.962 8.929 1.00 0.00 N ATOM 233 CA VAL 31 38.708 16.438 8.657 1.00 0.00 C ATOM 234 C VAL 31 38.928 16.239 7.164 1.00 0.00 C ATOM 235 O VAL 31 38.061 15.716 6.463 1.00 0.00 O ATOM 236 CB VAL 31 38.949 15.103 9.386 1.00 0.00 C ATOM 237 CG1 VAL 31 40.349 14.583 9.093 1.00 0.00 C ATOM 238 CG2 VAL 31 38.746 15.268 10.883 1.00 0.00 C ATOM 239 N VAL 32 40.093 16.657 6.681 1.00 0.00 N ATOM 240 CA VAL 32 40.402 16.591 5.259 1.00 0.00 C ATOM 241 C VAL 32 41.688 15.813 5.009 1.00 0.00 C ATOM 242 O VAL 32 42.663 15.953 5.748 1.00 0.00 O ATOM 243 CB VAL 32 40.537 17.997 4.643 1.00 0.00 C ATOM 244 CG1 VAL 32 40.850 17.900 3.158 1.00 0.00 C ATOM 245 CG2 VAL 32 39.264 18.800 4.867 1.00 0.00 C ATOM 246 N TYR 33 41.685 14.993 3.963 1.00 0.00 N ATOM 247 CA TYR 33 42.874 14.243 3.572 1.00 0.00 C ATOM 248 C TYR 33 43.221 14.489 2.110 1.00 0.00 C ATOM 249 O TYR 33 42.339 14.561 1.255 1.00 0.00 O ATOM 250 CB TYR 33 42.668 12.748 3.819 1.00 0.00 C ATOM 251 CG TYR 33 42.672 12.361 5.282 1.00 0.00 C ATOM 252 CD1 TYR 33 41.490 12.301 6.007 1.00 0.00 C ATOM 253 CD2 TYR 33 43.857 12.056 5.934 1.00 0.00 C ATOM 254 CE1 TYR 33 41.488 11.950 7.342 1.00 0.00 C ATOM 255 CE2 TYR 33 43.867 11.703 7.269 1.00 0.00 C ATOM 256 CZ TYR 33 42.680 11.651 7.970 1.00 0.00 C ATOM 257 OH TYR 33 42.684 11.298 9.300 1.00 0.00 H ATOM 258 N VAL 34 44.514 14.616 1.829 1.00 0.00 N ATOM 259 CA VAL 34 44.999 14.645 0.455 1.00 0.00 C ATOM 260 C VAL 34 46.112 13.628 0.241 1.00 0.00 C ATOM 261 O VAL 34 47.180 13.722 0.847 1.00 0.00 O ATOM 262 CB VAL 34 45.516 16.044 0.068 1.00 0.00 C ATOM 263 CG1 VAL 34 46.056 16.037 -1.355 1.00 0.00 C ATOM 264 CG2 VAL 34 44.410 17.079 0.211 1.00 0.00 C ATOM 265 N ASP 35 45.857 12.651 -0.624 1.00 0.00 N ATOM 266 CA ASP 35 46.750 11.510 -0.778 1.00 0.00 C ATOM 267 C ASP 35 46.927 10.768 0.540 1.00 0.00 C ATOM 268 O ASP 35 47.985 10.195 0.804 1.00 0.00 O ATOM 269 CB ASP 35 48.111 11.963 -1.314 1.00 0.00 C ATOM 270 CG ASP 35 48.068 12.565 -2.712 1.00 0.00 C ATOM 271 OD1 ASP 35 47.502 11.950 -3.586 1.00 0.00 O ATOM 272 OD2 ASP 35 48.459 13.698 -2.861 1.00 0.00 O ATOM 273 N GLY 36 45.888 10.781 1.366 1.00 0.00 N ATOM 274 CA GLY 36 45.876 10.004 2.599 1.00 0.00 C ATOM 275 C GLY 36 46.668 10.703 3.697 1.00 0.00 C ATOM 276 O GLY 36 47.039 10.087 4.697 1.00 0.00 O ATOM 277 N LYS 37 46.924 11.993 3.505 1.00 0.00 N ATOM 278 CA LYS 37 47.706 12.769 4.460 1.00 0.00 C ATOM 279 C LYS 37 46.948 14.013 4.910 1.00 0.00 C ATOM 280 O LYS 37 46.154 14.573 4.155 1.00 0.00 O ATOM 281 CB LYS 37 49.054 13.164 3.856 1.00 0.00 C ATOM 282 CG LYS 37 49.958 11.987 3.513 1.00 0.00 C ATOM 283 CD LYS 37 51.273 12.457 2.910 1.00 0.00 C ATOM 284 CE LYS 37 52.160 11.280 2.527 1.00 0.00 C ATOM 285 NZ LYS 37 53.445 11.724 1.925 1.00 0.00 N ATOM 286 N GLU 38 47.199 14.439 6.142 1.00 0.00 N ATOM 287 CA GLU 38 46.603 15.661 6.666 1.00 0.00 C ATOM 288 C GLU 38 47.425 16.885 6.280 1.00 0.00 C ATOM 289 O GLU 38 48.455 17.171 6.890 1.00 0.00 O ATOM 290 CB GLU 38 46.465 15.581 8.189 1.00 0.00 C ATOM 291 CG GLU 38 45.755 16.771 8.819 1.00 0.00 C ATOM 292 CD GLU 38 45.757 16.675 10.320 1.00 0.00 C ATOM 293 OE1 GLU 38 46.238 15.693 10.833 1.00 0.00 O ATOM 294 OE2 GLU 38 45.380 17.630 10.957 1.00 0.00 O ATOM 295 N GLU 39 46.962 17.604 5.262 1.00 0.00 N ATOM 296 CA GLU 39 47.690 18.756 4.745 1.00 0.00 C ATOM 297 C GLU 39 47.589 19.944 5.696 1.00 0.00 C ATOM 298 O GLU 39 48.565 20.663 5.910 1.00 0.00 O ATOM 299 CB GLU 39 47.165 19.144 3.361 1.00 0.00 C ATOM 300 CG GLU 39 47.907 20.303 2.709 1.00 0.00 C ATOM 301 CD GLU 39 47.375 20.584 1.331 1.00 0.00 C ATOM 302 OE1 GLU 39 46.471 19.902 0.913 1.00 0.00 O ATOM 303 OE2 GLU 39 47.794 21.553 0.741 1.00 0.00 O ATOM 304 N ILE 40 46.403 20.141 6.261 1.00 0.00 N ATOM 305 CA ILE 40 46.102 21.363 6.998 1.00 0.00 C ATOM 306 C ILE 40 45.737 21.056 8.446 1.00 0.00 C ATOM 307 O ILE 40 44.995 20.114 8.724 1.00 0.00 O ATOM 308 CB ILE 40 44.951 22.148 6.343 1.00 0.00 C ATOM 309 CG1 ILE 40 45.332 22.570 4.922 1.00 0.00 C ATOM 310 CG2 ILE 40 44.590 23.363 7.184 1.00 0.00 C ATOM 311 CD1 ILE 40 44.180 23.129 4.120 1.00 0.00 C ATOM 312 N ARG 41 46.263 21.858 9.365 1.00 0.00 N ATOM 313 CA ARG 41 45.941 21.717 10.781 1.00 0.00 C ATOM 314 C ARG 41 44.446 21.502 10.985 1.00 0.00 C ATOM 315 O ARG 41 43.626 22.299 10.530 1.00 0.00 O ATOM 316 CB ARG 41 46.454 22.887 11.606 1.00 0.00 C ATOM 317 CG ARG 41 46.362 22.697 13.112 1.00 0.00 C ATOM 318 CD ARG 41 46.770 23.883 13.906 1.00 0.00 C ATOM 319 NE ARG 41 48.147 24.302 13.701 1.00 0.00 N ATOM 320 CZ ARG 41 48.683 25.436 14.193 1.00 0.00 C ATOM 321 NH1 ARG 41 47.957 26.284 14.886 1.00 0.00 H ATOM 322 NH2 ARG 41 49.957 25.684 13.940 1.00 0.00 H ATOM 323 N LYS 42 44.099 20.420 11.674 1.00 0.00 N ATOM 324 CA LYS 42 42.701 20.082 11.914 1.00 0.00 C ATOM 325 C LYS 42 41.915 21.295 12.392 1.00 0.00 C ATOM 326 O LYS 42 40.798 21.542 11.937 1.00 0.00 O ATOM 327 CB LYS 42 42.593 18.948 12.935 1.00 0.00 C ATOM 328 CG LYS 42 41.180 18.418 13.138 1.00 0.00 C ATOM 329 CD LYS 42 41.152 17.294 14.164 1.00 0.00 C ATOM 330 CE LYS 42 41.848 16.047 13.639 1.00 0.00 C ATOM 331 NZ LYS 42 41.780 14.922 14.611 1.00 0.00 N ATOM 332 N GLU 43 42.504 22.050 13.312 1.00 0.00 N ATOM 333 CA GLU 43 41.882 23.268 13.818 1.00 0.00 C ATOM 334 C GLU 43 41.563 24.235 12.684 1.00 0.00 C ATOM 335 O GLU 43 40.472 24.802 12.629 1.00 0.00 O ATOM 336 CB GLU 43 42.790 23.946 14.848 1.00 0.00 C ATOM 337 CG GLU 43 42.222 25.226 15.441 1.00 0.00 C ATOM 338 CD GLU 43 43.137 25.799 16.486 1.00 0.00 C ATOM 339 OE1 GLU 43 44.150 25.196 16.757 1.00 0.00 O ATOM 340 OE2 GLU 43 42.887 26.894 16.934 1.00 0.00 O ATOM 341 N TRP 44 42.522 24.418 11.784 1.00 0.00 N ATOM 342 CA TRP 44 42.341 25.307 10.643 1.00 0.00 C ATOM 343 C TRP 44 41.275 24.774 9.693 1.00 0.00 C ATOM 344 O TRP 44 40.468 25.536 9.158 1.00 0.00 O ATOM 345 CB TRP 44 43.663 25.490 9.896 1.00 0.00 C ATOM 346 CG TRP 44 44.689 26.258 10.674 1.00 0.00 C ATOM 347 CD1 TRP 44 44.480 26.966 11.819 1.00 0.00 C ATOM 348 CD2 TRP 44 46.082 26.392 10.366 1.00 0.00 C ATOM 349 NE1 TRP 44 45.654 27.536 12.244 1.00 0.00 N ATOM 350 CE2 TRP 44 46.655 27.196 11.368 1.00 0.00 C ATOM 351 CE3 TRP 44 46.900 25.908 9.339 1.00 0.00 C ATOM 352 CZ2 TRP 44 48.000 27.529 11.375 1.00 0.00 C ATOM 353 CZ3 TRP 44 48.250 26.241 9.346 1.00 0.00 C ATOM 354 CH2 TRP 44 48.784 27.028 10.335 1.00 0.00 H ATOM 355 N MET 45 41.275 23.461 9.488 1.00 0.00 N ATOM 356 CA MET 45 40.340 22.830 8.562 1.00 0.00 C ATOM 357 C MET 45 38.899 23.055 8.997 1.00 0.00 C ATOM 358 O MET 45 38.013 23.254 8.165 1.00 0.00 O ATOM 359 CB MET 45 40.634 21.335 8.454 1.00 0.00 C ATOM 360 CG MET 45 41.959 20.999 7.786 1.00 0.00 C ATOM 361 SD MET 45 42.069 19.269 7.290 1.00 0.00 S ATOM 362 CE MET 45 42.198 18.467 8.886 1.00 0.00 C ATOM 363 N PHE 46 38.667 23.020 10.305 1.00 0.00 N ATOM 364 CA PHE 46 37.365 23.365 10.862 1.00 0.00 C ATOM 365 C PHE 46 37.039 24.836 10.629 1.00 0.00 C ATOM 366 O PHE 46 35.918 25.180 10.258 1.00 0.00 O ATOM 367 CB PHE 46 37.324 23.046 12.358 1.00 0.00 C ATOM 368 CG PHE 46 36.011 23.375 13.011 1.00 0.00 C ATOM 369 CD1 PHE 46 34.909 22.551 12.838 1.00 0.00 C ATOM 370 CD2 PHE 46 35.875 24.508 13.799 1.00 0.00 C ATOM 371 CE1 PHE 46 33.701 22.852 13.439 1.00 0.00 C ATOM 372 CE2 PHE 46 34.669 24.811 14.401 1.00 0.00 C ATOM 373 CZ PHE 46 33.582 23.982 14.220 1.00 0.00 C ATOM 374 N LYS 47 38.026 25.697 10.852 1.00 0.00 N ATOM 375 CA LYS 47 37.839 27.134 10.690 1.00 0.00 C ATOM 376 C LYS 47 37.565 27.495 9.236 1.00 0.00 C ATOM 377 O LYS 47 36.937 28.512 8.947 1.00 0.00 O ATOM 378 CB LYS 47 39.066 27.895 11.198 1.00 0.00 C ATOM 379 CG LYS 47 39.236 27.875 12.712 1.00 0.00 C ATOM 380 CD LYS 47 40.494 28.617 13.137 1.00 0.00 C ATOM 381 CE LYS 47 40.649 28.625 14.650 1.00 0.00 C ATOM 382 NZ LYS 47 41.893 29.319 15.079 1.00 0.00 N ATOM 383 N LEU 48 38.040 26.653 8.325 1.00 0.00 N ATOM 384 CA LEU 48 37.836 26.875 6.898 1.00 0.00 C ATOM 385 C LEU 48 36.381 26.650 6.508 1.00 0.00 C ATOM 386 O LEU 48 35.921 27.138 5.475 1.00 0.00 O ATOM 387 CB LEU 48 38.753 25.956 6.081 1.00 0.00 C ATOM 388 CG LEU 48 40.242 26.323 6.117 1.00 0.00 C ATOM 389 CD1 LEU 48 41.063 25.240 5.430 1.00 0.00 C ATOM 390 CD2 LEU 48 40.452 27.669 5.440 1.00 0.00 C ATOM 391 N VAL 49 35.657 25.911 7.344 1.00 0.00 N ATOM 392 CA VAL 49 34.255 25.609 7.080 1.00 0.00 C ATOM 393 C VAL 49 33.375 26.829 7.323 1.00 0.00 C ATOM 394 O VAL 49 33.204 27.268 8.460 1.00 0.00 O ATOM 395 CB VAL 49 33.754 24.444 7.955 1.00 0.00 C ATOM 396 CG1 VAL 49 32.286 24.162 7.676 1.00 0.00 C ATOM 397 CG2 VAL 49 34.591 23.198 7.712 1.00 0.00 C ATOM 398 N GLY 50 32.817 27.374 6.247 1.00 0.00 N ATOM 399 CA GLY 50 31.887 28.492 6.348 1.00 0.00 C ATOM 400 C GLY 50 32.627 29.824 6.346 1.00 0.00 C ATOM 401 O GLY 50 32.018 30.883 6.492 1.00 0.00 O ATOM 402 N LYS 51 33.943 29.763 6.180 1.00 0.00 N ATOM 403 CA LYS 51 34.779 30.957 6.239 1.00 0.00 C ATOM 404 C LYS 51 35.854 30.931 5.161 1.00 0.00 C ATOM 405 O LYS 51 36.388 29.873 4.831 1.00 0.00 O ATOM 406 CB LYS 51 35.422 31.095 7.620 1.00 0.00 C ATOM 407 CG LYS 51 34.436 31.360 8.750 1.00 0.00 C ATOM 408 CD LYS 51 35.153 31.557 10.076 1.00 0.00 C ATOM 409 CE LYS 51 34.168 31.818 11.206 1.00 0.00 C ATOM 410 NZ LYS 51 34.855 31.982 12.516 1.00 0.00 N ATOM 411 N GLU 52 36.168 32.102 4.617 1.00 0.00 N ATOM 412 CA GLU 52 37.250 32.231 3.648 1.00 0.00 C ATOM 413 C GLU 52 38.520 32.748 4.306 1.00 0.00 C ATOM 414 O GLU 52 38.552 33.863 4.829 1.00 0.00 O ATOM 415 CB GLU 52 36.836 33.159 2.503 1.00 0.00 C ATOM 416 CG GLU 52 37.902 33.353 1.434 1.00 0.00 C ATOM 417 CD GLU 52 37.422 34.268 0.343 1.00 0.00 C ATOM 418 OE1 GLU 52 36.309 34.730 0.428 1.00 0.00 O ATOM 419 OE2 GLU 52 38.204 34.595 -0.519 1.00 0.00 O ATOM 420 N THR 53 39.569 31.932 4.279 1.00 0.00 N ATOM 421 CA THR 53 40.827 32.279 4.931 1.00 0.00 C ATOM 422 C THR 53 42.013 32.028 4.008 1.00 0.00 C ATOM 423 O THR 53 42.050 31.030 3.288 1.00 0.00 O ATOM 424 CB THR 53 41.027 31.483 6.234 1.00 0.00 C ATOM 425 OG1 THR 53 39.948 31.759 7.136 1.00 0.00 O ATOM 426 CG2 THR 53 42.344 31.862 6.894 1.00 0.00 C ATOM 427 N PHE 54 42.980 32.938 4.033 1.00 0.00 N ATOM 428 CA PHE 54 44.156 32.830 3.178 1.00 0.00 C ATOM 429 C PHE 54 45.441 32.905 3.996 1.00 0.00 C ATOM 430 O PHE 54 45.477 33.534 5.054 1.00 0.00 O ATOM 431 CB PHE 54 44.146 33.930 2.115 1.00 0.00 C ATOM 432 CG PHE 54 44.293 35.316 2.675 1.00 0.00 C ATOM 433 CD1 PHE 54 45.548 35.888 2.828 1.00 0.00 C ATOM 434 CD2 PHE 54 43.178 36.052 3.049 1.00 0.00 C ATOM 435 CE1 PHE 54 45.685 37.164 3.343 1.00 0.00 C ATOM 436 CE2 PHE 54 43.312 37.328 3.562 1.00 0.00 C ATOM 437 CZ PHE 54 44.568 37.883 3.710 1.00 0.00 C ATOM 438 N TYR 55 46.490 32.262 3.500 1.00 0.00 N ATOM 439 CA TYR 55 47.801 32.327 4.136 1.00 0.00 C ATOM 440 C TYR 55 48.846 32.897 3.186 1.00 0.00 C ATOM 441 O TYR 55 48.944 32.479 2.031 1.00 0.00 O ATOM 442 CB TYR 55 48.231 30.941 4.619 1.00 0.00 C ATOM 443 CG TYR 55 47.353 30.373 5.713 1.00 0.00 C ATOM 444 CD1 TYR 55 46.254 29.585 5.408 1.00 0.00 C ATOM 445 CD2 TYR 55 47.629 30.627 7.049 1.00 0.00 C ATOM 446 CE1 TYR 55 45.449 29.065 6.402 1.00 0.00 C ATOM 447 CE2 TYR 55 46.832 30.112 8.052 1.00 0.00 C ATOM 448 CZ TYR 55 45.742 29.331 7.725 1.00 0.00 C ATOM 449 OH TYR 55 44.945 28.815 8.720 1.00 0.00 H ATOM 450 N VAL 56 49.627 33.851 3.676 1.00 0.00 N ATOM 451 CA VAL 56 50.693 34.453 2.883 1.00 0.00 C ATOM 452 C VAL 56 52.020 33.742 3.111 1.00 0.00 C ATOM 453 O VAL 56 52.639 33.884 4.165 1.00 0.00 O ATOM 454 CB VAL 56 50.862 35.950 3.208 1.00 0.00 C ATOM 455 CG1 VAL 56 51.992 36.549 2.383 1.00 0.00 C ATOM 456 CG2 VAL 56 49.563 36.701 2.955 1.00 0.00 C ATOM 457 N GLY 57 52.451 32.974 2.115 1.00 0.00 N ATOM 458 CA GLY 57 53.706 32.238 2.205 1.00 0.00 C ATOM 459 C GLY 57 54.898 33.144 1.926 1.00 0.00 C ATOM 460 O GLY 57 55.992 32.924 2.446 1.00 0.00 O ATOM 461 N ALA 58 54.679 34.165 1.104 1.00 0.00 N ATOM 462 CA ALA 58 55.737 35.101 0.747 1.00 0.00 C ATOM 463 C ALA 58 55.167 36.368 0.125 1.00 0.00 C ATOM 464 O ALA 58 53.949 36.512 -0.007 1.00 0.00 O ATOM 465 CB ALA 58 56.731 34.443 -0.200 1.00 0.00 C ATOM 466 N ALA 59 56.049 37.285 -0.255 1.00 0.00 N ATOM 467 CA ALA 59 55.633 38.556 -0.836 1.00 0.00 C ATOM 468 C ALA 59 54.846 38.341 -2.122 1.00 0.00 C ATOM 469 O ALA 59 54.092 39.215 -2.552 1.00 0.00 O ATOM 470 CB ALA 59 56.842 39.444 -1.093 1.00 0.00 C ATOM 471 N LYS 60 55.026 37.176 -2.734 1.00 0.00 N ATOM 472 CA LYS 60 54.356 36.857 -3.989 1.00 0.00 C ATOM 473 C LYS 60 53.693 35.489 -3.929 1.00 0.00 C ATOM 474 O LYS 60 53.036 35.063 -4.879 1.00 0.00 O ATOM 475 CB LYS 60 55.349 36.909 -5.152 1.00 0.00 C ATOM 476 CG LYS 60 55.917 38.294 -5.433 1.00 0.00 C ATOM 477 CD LYS 60 56.893 38.265 -6.600 1.00 0.00 C ATOM 478 CE LYS 60 57.609 39.598 -6.756 1.00 0.00 C ATOM 479 NZ LYS 60 58.512 39.610 -7.939 1.00 0.00 N ATOM 480 N THR 61 53.870 34.799 -2.805 1.00 0.00 N ATOM 481 CA THR 61 53.264 33.487 -2.609 1.00 0.00 C ATOM 482 C THR 61 52.075 33.565 -1.660 1.00 0.00 C ATOM 483 O THR 61 52.221 33.946 -0.498 1.00 0.00 O ATOM 484 CB THR 61 54.282 32.472 -2.056 1.00 0.00 C ATOM 485 OG1 THR 61 55.378 32.344 -2.971 1.00 0.00 O ATOM 486 CG2 THR 61 53.628 31.113 -1.861 1.00 0.00 C ATOM 487 N LYS 62 50.901 33.203 -2.162 1.00 0.00 N ATOM 488 CA LYS 62 49.678 33.262 -1.370 1.00 0.00 C ATOM 489 C LYS 62 48.731 32.127 -1.736 1.00 0.00 C ATOM 490 O LYS 62 48.635 31.732 -2.897 1.00 0.00 O ATOM 491 CB LYS 62 48.981 34.610 -1.558 1.00 0.00 C ATOM 492 CG LYS 62 49.776 35.806 -1.050 1.00 0.00 C ATOM 493 CD LYS 62 48.980 37.096 -1.185 1.00 0.00 C ATOM 494 CE LYS 62 49.753 38.283 -0.630 1.00 0.00 C ATOM 495 NZ LYS 62 48.990 39.554 -0.761 1.00 0.00 N ATOM 496 N ALA 63 48.028 31.605 -0.735 1.00 0.00 N ATOM 497 CA ALA 63 47.006 30.590 -0.963 1.00 0.00 C ATOM 498 C ALA 63 45.726 30.918 -0.207 1.00 0.00 C ATOM 499 O ALA 63 45.755 31.199 0.991 1.00 0.00 O ATOM 500 CB ALA 63 47.524 29.216 -0.563 1.00 0.00 C ATOM 501 N THR 64 44.602 30.880 -0.914 1.00 0.00 N ATOM 502 CA THR 64 43.304 31.147 -0.304 1.00 0.00 C ATOM 503 C THR 64 42.408 29.915 -0.358 1.00 0.00 C ATOM 504 O THR 64 42.210 29.324 -1.420 1.00 0.00 O ATOM 505 CB THR 64 42.585 32.321 -0.992 1.00 0.00 C ATOM 506 OG1 THR 64 43.395 33.500 -0.897 1.00 0.00 O ATOM 507 CG2 THR 64 41.239 32.582 -0.335 1.00 0.00 C ATOM 508 N ILE 65 41.867 29.531 0.794 1.00 0.00 N ATOM 509 CA ILE 65 41.039 28.336 0.892 1.00 0.00 C ATOM 510 C ILE 65 39.743 28.623 1.637 1.00 0.00 C ATOM 511 O ILE 65 39.739 29.324 2.650 1.00 0.00 O ATOM 512 CB ILE 65 41.785 27.189 1.599 1.00 0.00 C ATOM 513 CG1 ILE 65 43.047 26.811 0.819 1.00 0.00 C ATOM 514 CG2 ILE 65 40.874 25.981 1.760 1.00 0.00 C ATOM 515 CD1 ILE 65 43.947 25.839 1.547 1.00 0.00 C ATOM 516 N ASN 66 38.642 28.077 1.133 1.00 0.00 N ATOM 517 CA ASN 66 37.371 28.113 1.848 1.00 0.00 C ATOM 518 C ASN 66 36.577 26.831 1.624 1.00 0.00 C ATOM 519 O ASN 66 36.705 26.184 0.585 1.00 0.00 O ATOM 520 CB ASN 66 36.543 29.320 1.447 1.00 0.00 C ATOM 521 CG ASN 66 36.075 29.286 0.019 1.00 0.00 C ATOM 522 OD1 ASN 66 35.170 28.526 -0.342 1.00 0.00 O ATOM 523 ND2 ASN 66 36.742 30.047 -0.811 1.00 0.00 N ATOM 524 N ILE 67 35.759 26.470 2.605 1.00 0.00 N ATOM 525 CA ILE 67 34.931 25.273 2.512 1.00 0.00 C ATOM 526 C ILE 67 33.454 25.611 2.671 1.00 0.00 C ATOM 527 O ILE 67 33.069 26.338 3.586 1.00 0.00 O ATOM 528 CB ILE 67 35.325 24.229 3.573 1.00 0.00 C ATOM 529 CG1 ILE 67 36.780 23.794 3.378 1.00 0.00 C ATOM 530 CG2 ILE 67 34.394 23.028 3.509 1.00 0.00 C ATOM 531 CD1 ILE 67 37.321 22.948 4.508 1.00 0.00 C ATOM 532 N ASP 68 32.631 25.080 1.771 1.00 0.00 N ATOM 533 CA ASP 68 31.191 25.297 1.831 1.00 0.00 C ATOM 534 C ASP 68 30.448 23.991 2.083 1.00 0.00 C ATOM 535 O ASP 68 29.934 23.369 1.154 1.00 0.00 O ATOM 536 CB ASP 68 30.692 25.944 0.537 1.00 0.00 C ATOM 537 CG ASP 68 29.224 26.345 0.559 1.00 0.00 C ATOM 538 OD1 ASP 68 28.590 26.150 1.569 1.00 0.00 O ATOM 539 OD2 ASP 68 28.788 26.982 -0.369 1.00 0.00 O ATOM 540 N ALA 69 30.396 23.581 3.346 1.00 0.00 N ATOM 541 CA ALA 69 29.776 22.311 3.714 1.00 0.00 C ATOM 542 C ALA 69 28.289 22.309 3.387 1.00 0.00 C ATOM 543 O ALA 69 27.696 21.255 3.157 1.00 0.00 O ATOM 544 CB ALA 69 29.997 22.023 5.191 1.00 0.00 C ATOM 545 N ILE 70 27.690 23.496 3.368 1.00 0.00 N ATOM 546 CA ILE 70 26.271 23.632 3.061 1.00 0.00 C ATOM 547 C ILE 70 25.957 23.115 1.663 1.00 0.00 C ATOM 548 O ILE 70 24.957 22.428 1.455 1.00 0.00 O ATOM 549 CB ILE 70 25.807 25.096 3.173 1.00 0.00 C ATOM 550 CG1 ILE 70 25.862 25.563 4.630 1.00 0.00 C ATOM 551 CG2 ILE 70 24.402 25.253 2.612 1.00 0.00 C ATOM 552 CD1 ILE 70 25.682 27.054 4.799 1.00 0.00 C ATOM 553 N SER 71 26.817 23.449 0.707 1.00 0.00 N ATOM 554 CA SER 71 26.631 23.022 -0.674 1.00 0.00 C ATOM 555 C SER 71 27.503 21.817 -1.001 1.00 0.00 C ATOM 556 O SER 71 27.363 21.206 -2.062 1.00 0.00 O ATOM 557 CB SER 71 26.936 24.167 -1.619 1.00 0.00 C ATOM 558 OG SER 71 26.073 25.253 -1.427 1.00 0.00 O ATOM 559 N GLY 72 28.401 21.479 -0.083 1.00 0.00 N ATOM 560 CA GLY 72 29.327 20.369 -0.290 1.00 0.00 C ATOM 561 C GLY 72 30.459 20.765 -1.228 1.00 0.00 C ATOM 562 O GLY 72 31.041 19.917 -1.904 1.00 0.00 O ATOM 563 N PHE 73 30.765 22.056 -1.266 1.00 0.00 N ATOM 564 CA PHE 73 31.758 22.582 -2.195 1.00 0.00 C ATOM 565 C PHE 73 33.039 22.974 -1.470 1.00 0.00 C ATOM 566 O PHE 73 33.022 23.273 -0.276 1.00 0.00 O ATOM 567 CB PHE 73 31.193 23.785 -2.955 1.00 0.00 C ATOM 568 CG PHE 73 30.058 23.442 -3.877 1.00 0.00 C ATOM 569 CD1 PHE 73 29.806 22.124 -4.230 1.00 0.00 C ATOM 570 CD2 PHE 73 29.239 24.435 -4.391 1.00 0.00 C ATOM 571 CE1 PHE 73 28.762 21.807 -5.077 1.00 0.00 C ATOM 572 CE2 PHE 73 28.193 24.122 -5.238 1.00 0.00 C ATOM 573 CZ PHE 73 27.955 22.806 -5.582 1.00 0.00 C ATOM 574 N ALA 74 34.150 22.971 -2.200 1.00 0.00 N ATOM 575 CA ALA 74 35.417 23.458 -1.667 1.00 0.00 C ATOM 576 C ALA 74 36.216 24.198 -2.733 1.00 0.00 C ATOM 577 O ALA 74 36.290 23.759 -3.880 1.00 0.00 O ATOM 578 CB ALA 74 36.229 22.305 -1.095 1.00 0.00 C ATOM 579 N TYR 75 36.812 25.319 -2.346 1.00 0.00 N ATOM 580 CA TYR 75 37.504 26.184 -3.293 1.00 0.00 C ATOM 581 C TYR 75 38.924 26.486 -2.828 1.00 0.00 C ATOM 582 O TYR 75 39.141 26.874 -1.682 1.00 0.00 O ATOM 583 CB TYR 75 36.728 27.488 -3.491 1.00 0.00 C ATOM 584 CG TYR 75 35.361 27.298 -4.111 1.00 0.00 C ATOM 585 CD1 TYR 75 34.238 27.110 -3.317 1.00 0.00 C ATOM 586 CD2 TYR 75 35.196 27.311 -5.488 1.00 0.00 C ATOM 587 CE1 TYR 75 32.987 26.937 -3.879 1.00 0.00 C ATOM 588 CE2 TYR 75 33.950 27.139 -6.060 1.00 0.00 C ATOM 589 CZ TYR 75 32.848 26.952 -5.252 1.00 0.00 C ATOM 590 OH TYR 75 31.605 26.781 -5.815 1.00 0.00 H ATOM 591 N GLU 76 39.886 26.305 -3.726 1.00 0.00 N ATOM 592 CA GLU 76 41.282 26.591 -3.422 1.00 0.00 C ATOM 593 C GLU 76 41.931 27.413 -4.527 1.00 0.00 C ATOM 594 O GLU 76 42.070 26.951 -5.659 1.00 0.00 O ATOM 595 CB GLU 76 42.060 25.290 -3.210 1.00 0.00 C ATOM 596 CG GLU 76 43.529 25.485 -2.859 1.00 0.00 C ATOM 597 CD GLU 76 44.218 24.167 -2.638 1.00 0.00 C ATOM 598 OE1 GLU 76 43.581 23.153 -2.795 1.00 0.00 O ATOM 599 OE2 GLU 76 45.408 24.170 -2.423 1.00 0.00 O ATOM 600 N TYR 77 42.326 28.638 -4.191 1.00 0.00 N ATOM 601 CA TYR 77 42.985 29.519 -5.149 1.00 0.00 C ATOM 602 C TYR 77 44.402 29.857 -4.701 1.00 0.00 C ATOM 603 O TYR 77 44.599 30.623 -3.758 1.00 0.00 O ATOM 604 CB TYR 77 42.174 30.803 -5.341 1.00 0.00 C ATOM 605 CG TYR 77 40.788 30.574 -5.901 1.00 0.00 C ATOM 606 CD1 TYR 77 39.695 30.420 -5.060 1.00 0.00 C ATOM 607 CD2 TYR 77 40.575 30.514 -7.270 1.00 0.00 C ATOM 608 CE1 TYR 77 38.427 30.210 -5.567 1.00 0.00 C ATOM 609 CE2 TYR 77 39.312 30.306 -7.788 1.00 0.00 C ATOM 610 CZ TYR 77 38.240 30.154 -6.933 1.00 0.00 C ATOM 611 OH TYR 77 36.979 29.948 -7.443 1.00 0.00 H ATOM 612 N THR 78 45.385 29.280 -5.381 1.00 0.00 N ATOM 613 CA THR 78 46.783 29.452 -5.003 1.00 0.00 C ATOM 614 C THR 78 47.580 30.106 -6.125 1.00 0.00 C ATOM 615 O THR 78 47.492 29.697 -7.283 1.00 0.00 O ATOM 616 CB THR 78 47.440 28.109 -4.637 1.00 0.00 C ATOM 617 OG1 THR 78 46.740 27.517 -3.534 1.00 0.00 O ATOM 618 CG2 THR 78 48.898 28.314 -4.256 1.00 0.00 C ATOM 619 N LEU 79 48.359 31.124 -5.774 1.00 0.00 N ATOM 620 CA LEU 79 49.176 31.835 -6.750 1.00 0.00 C ATOM 621 C LEU 79 50.474 31.089 -7.031 1.00 0.00 C ATOM 622 O LEU 79 50.847 30.888 -8.187 1.00 0.00 O ATOM 623 CB LEU 79 49.476 33.256 -6.256 1.00 0.00 C ATOM 624 CG LEU 79 48.254 34.176 -6.136 1.00 0.00 C ATOM 625 CD1 LEU 79 48.659 35.504 -5.512 1.00 0.00 C ATOM 626 CD2 LEU 79 47.642 34.392 -7.512 1.00 0.00 C ATOM 627 N GLU 80 51.158 30.680 -5.969 1.00 0.00 N ATOM 628 CA GLU 80 52.438 29.996 -6.099 1.00 0.00 C ATOM 629 C GLU 80 52.541 28.828 -5.127 1.00 0.00 C ATOM 630 O GLU 80 52.049 28.901 -4.000 1.00 0.00 O ATOM 631 CB GLU 80 53.594 30.973 -5.871 1.00 0.00 C ATOM 632 CG GLU 80 53.679 32.096 -6.895 1.00 0.00 C ATOM 633 CD GLU 80 54.858 32.990 -6.629 1.00 0.00 C ATOM 634 OE1 GLU 80 55.551 32.757 -5.668 1.00 0.00 O ATOM 635 OE2 GLU 80 55.133 33.837 -7.446 1.00 0.00 O ATOM 636 N ILE 81 53.182 27.751 -5.566 1.00 0.00 N ATOM 637 CA ILE 81 53.438 26.605 -4.702 1.00 0.00 C ATOM 638 C ILE 81 54.924 26.273 -4.653 1.00 0.00 C ATOM 639 O ILE 81 55.536 25.965 -5.676 1.00 0.00 O ATOM 640 CB ILE 81 52.659 25.361 -5.168 1.00 0.00 C ATOM 641 CG1 ILE 81 51.156 25.646 -5.177 1.00 0.00 C ATOM 642 CG2 ILE 81 52.973 24.173 -4.272 1.00 0.00 C ATOM 643 CD1 ILE 81 50.332 24.556 -5.823 1.00 0.00 C ATOM 644 N ASN 82 55.501 26.339 -3.457 1.00 0.00 N ATOM 645 CA ASN 82 56.886 25.937 -3.253 1.00 0.00 C ATOM 646 C ASN 82 57.835 26.778 -4.097 1.00 0.00 C ATOM 647 O ASN 82 58.848 26.282 -4.592 1.00 0.00 O ATOM 648 CB ASN 82 57.087 24.462 -3.551 1.00 0.00 C ATOM 649 CG ASN 82 56.416 23.548 -2.563 1.00 0.00 C ATOM 650 OD1 ASN 82 56.204 23.907 -1.399 1.00 0.00 O ATOM 651 ND2 ASN 82 56.155 22.342 -2.997 1.00 0.00 N ATOM 652 N GLY 83 57.502 28.054 -4.258 1.00 0.00 N ATOM 653 CA GLY 83 58.378 28.993 -4.948 1.00 0.00 C ATOM 654 C GLY 83 58.106 29.001 -6.447 1.00 0.00 C ATOM 655 O GLY 83 58.656 29.818 -7.184 1.00 0.00 O ATOM 656 N LYS 84 57.252 28.084 -6.894 1.00 0.00 N ATOM 657 CA LYS 84 56.831 28.042 -8.289 1.00 0.00 C ATOM 658 C LYS 84 55.411 28.571 -8.453 1.00 0.00 C ATOM 659 O LYS 84 54.649 28.635 -7.488 1.00 0.00 O ATOM 660 CB LYS 84 56.929 26.618 -8.835 1.00 0.00 C ATOM 661 CG LYS 84 58.331 26.025 -8.802 1.00 0.00 C ATOM 662 CD LYS 84 58.336 24.586 -9.295 1.00 0.00 C ATOM 663 CE LYS 84 59.740 24.002 -9.286 1.00 0.00 C ATOM 664 NZ LYS 84 59.758 22.587 -9.746 1.00 0.00 N ATOM 665 N SER 85 55.063 28.944 -9.678 1.00 0.00 N ATOM 666 CA SER 85 53.694 29.327 -10.002 1.00 0.00 C ATOM 667 C SER 85 52.767 28.118 -9.983 1.00 0.00 C ATOM 668 O SER 85 53.221 26.975 -9.970 1.00 0.00 O ATOM 669 CB SER 85 53.647 30.006 -11.356 1.00 0.00 C ATOM 670 OG SER 85 53.869 29.105 -12.406 1.00 0.00 O ATOM 671 N LEU 86 51.463 28.378 -9.982 1.00 0.00 N ATOM 672 CA LEU 86 50.469 27.311 -9.989 1.00 0.00 C ATOM 673 C LEU 86 50.580 26.464 -11.251 1.00 0.00 C ATOM 674 O LEU 86 50.487 25.237 -11.197 1.00 0.00 O ATOM 675 CB LEU 86 49.059 27.900 -9.865 1.00 0.00 C ATOM 676 CG LEU 86 47.921 26.871 -9.844 1.00 0.00 C ATOM 677 CD1 LEU 86 48.080 25.941 -8.649 1.00 0.00 C ATOM 678 CD2 LEU 86 46.583 27.593 -9.791 1.00 0.00 C ATOM 679 N LYS 87 50.778 27.125 -12.387 1.00 0.00 N ATOM 680 CA LYS 87 50.899 26.434 -13.665 1.00 0.00 C ATOM 681 C LYS 87 52.238 25.717 -13.778 1.00 0.00 C ATOM 682 O LYS 87 52.324 24.632 -14.355 1.00 0.00 O ATOM 683 CB LYS 87 50.730 27.418 -14.823 1.00 0.00 C ATOM 684 CG LYS 87 50.784 26.779 -16.205 1.00 0.00 C ATOM 685 CD LYS 87 50.498 27.797 -17.298 1.00 0.00 C ATOM 686 CE LYS 87 50.557 27.160 -18.678 1.00 0.00 C ATOM 687 NZ LYS 87 50.270 28.143 -19.758 1.00 0.00 N ATOM 688 N LYS 88 53.280 26.328 -13.223 1.00 0.00 N ATOM 689 CA LYS 88 54.616 25.746 -13.260 1.00 0.00 C ATOM 690 C LYS 88 54.706 24.516 -12.365 1.00 0.00 C ATOM 691 O LYS 88 55.281 23.497 -12.749 1.00 0.00 O ATOM 692 CB LYS 88 55.662 26.780 -12.839 1.00 0.00 C ATOM 693 CG LYS 88 57.100 26.283 -12.905 1.00 0.00 C ATOM 694 CD LYS 88 58.087 27.408 -12.630 1.00 0.00 C ATOM 695 CE LYS 88 59.525 26.915 -12.707 1.00 0.00 C ATOM 696 NZ LYS 88 60.503 28.014 -12.486 1.00 0.00 N ATOM 697 N TYR 89 54.134 24.617 -11.170 1.00 0.00 N ATOM 698 CA TYR 89 54.134 23.507 -10.224 1.00 0.00 C ATOM 699 C TYR 89 53.324 22.331 -10.755 1.00 0.00 C ATOM 700 O TYR 89 53.787 21.192 -10.743 1.00 0.00 O ATOM 701 CB TYR 89 53.581 23.958 -8.872 1.00 0.00 C ATOM 702 CG TYR 89 53.534 22.861 -7.831 1.00 0.00 C ATOM 703 CD1 TYR 89 54.665 22.521 -7.102 1.00 0.00 C ATOM 704 CD2 TYR 89 52.359 22.168 -7.579 1.00 0.00 C ATOM 705 CE1 TYR 89 54.628 21.519 -6.153 1.00 0.00 C ATOM 706 CE2 TYR 89 52.311 21.164 -6.631 1.00 0.00 C ATOM 707 CZ TYR 89 53.448 20.843 -5.919 1.00 0.00 C ATOM 708 OH TYR 89 53.405 19.845 -4.973 1.00 0.00 H ATOM 709 N MET 90 52.112 22.616 -11.219 1.00 0.00 N ATOM 710 CA MET 90 51.234 21.580 -11.751 1.00 0.00 C ATOM 711 C MET 90 51.614 21.215 -13.180 1.00 0.00 C ATOM 712 O MET 90 52.532 20.472 -13.386 1.00 0.00 O ATOM 713 CB MET 90 49.778 22.041 -11.693 1.00 0.00 C ATOM 714 CG MET 90 49.256 22.302 -10.287 1.00 0.00 C ATOM 715 SD MET 90 49.366 20.849 -9.224 1.00 0.00 S ATOM 716 CE MET 90 48.144 19.782 -9.982 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.16 67.4 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 53.25 70.3 118 100.0 118 ARMSMC SURFACE . . . . . . . . 71.18 58.3 108 100.0 108 ARMSMC BURIED . . . . . . . . 41.14 81.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.08 58.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 75.32 59.1 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 77.49 57.7 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 84.01 50.0 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 63.16 71.0 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 64.38 61.8 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 60.25 65.2 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 61.55 64.1 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 73.05 54.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 48.56 72.7 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 56.94 62.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 56.94 62.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 50.89 64.7 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 46.38 72.2 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 80.71 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.01 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 75.01 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 85.48 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 81.47 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 8.10 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.13 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.13 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.1015 CRMSCA SECONDARY STRUCTURE . . 8.04 59 100.0 59 CRMSCA SURFACE . . . . . . . . 10.33 55 100.0 55 CRMSCA BURIED . . . . . . . . 6.85 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.21 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 8.16 293 100.0 293 CRMSMC SURFACE . . . . . . . . 10.37 269 100.0 269 CRMSMC BURIED . . . . . . . . 7.02 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.74 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 10.88 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 9.44 252 100.0 252 CRMSSC SURFACE . . . . . . . . 12.20 204 100.0 204 CRMSSC BURIED . . . . . . . . 8.41 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.96 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 8.81 488 100.0 488 CRMSALL SURFACE . . . . . . . . 11.24 424 100.0 424 CRMSALL BURIED . . . . . . . . 7.73 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.065 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 7.140 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 9.149 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 6.362 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.088 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 7.215 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 9.121 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 6.481 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.539 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 9.586 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 8.400 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 10.907 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 7.703 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.760 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 7.788 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 9.920 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 7.077 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 3 10 20 66 90 90 DISTCA CA (P) 0.00 3.33 11.11 22.22 73.33 90 DISTCA CA (RMS) 0.00 1.61 2.18 3.41 6.56 DISTCA ALL (N) 4 23 62 141 480 716 716 DISTALL ALL (P) 0.56 3.21 8.66 19.69 67.04 716 DISTALL ALL (RMS) 0.81 1.47 2.20 3.43 6.60 DISTALL END of the results output