####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS127_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS127_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.66 4.66 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 56 - 86 2.00 5.35 LCS_AVERAGE: 22.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 69 - 85 0.92 6.47 LCS_AVERAGE: 10.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 5 90 3 3 6 13 14 21 30 37 44 51 57 63 66 70 74 76 78 80 87 88 LCS_GDT T 2 T 2 3 5 90 3 3 4 4 4 15 17 25 47 51 58 64 69 75 77 81 83 87 89 89 LCS_GDT D 3 D 3 3 7 90 3 3 4 16 20 33 39 47 53 61 63 70 72 76 79 81 84 87 89 89 LCS_GDT L 4 L 4 3 21 90 3 3 6 8 9 38 55 58 63 68 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 5 V 5 8 21 90 4 13 38 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 6 A 6 8 21 90 14 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 7 V 7 8 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT W 8 W 8 8 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT D 9 D 9 8 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 10 V 10 8 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 11 A 11 8 21 90 8 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT L 12 L 12 8 21 90 4 9 17 33 49 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT S 13 S 13 4 21 90 3 6 8 19 26 33 43 51 60 66 72 75 77 80 82 85 86 87 89 89 LCS_GDT D 14 D 14 10 21 90 12 27 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 15 G 15 10 21 90 12 25 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 16 V 16 10 21 90 12 27 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT H 17 H 17 10 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 18 K 18 10 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 19 I 19 10 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 20 E 20 10 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT F 21 F 21 10 21 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 22 E 22 10 21 90 11 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT H 23 H 23 10 21 90 8 23 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 24 G 24 9 21 90 3 5 33 46 51 54 56 60 64 68 72 75 77 80 82 85 86 87 89 89 LCS_GDT T 25 T 25 4 4 90 3 4 5 5 7 7 7 11 17 43 58 63 67 76 80 85 86 87 89 89 LCS_GDT T 26 T 26 4 4 90 3 4 5 5 7 7 7 8 10 11 16 31 45 65 73 76 84 87 89 89 LCS_GDT S 27 S 27 4 4 90 3 4 5 6 7 7 12 16 32 46 56 61 69 76 82 85 86 87 89 89 LCS_GDT G 28 G 28 4 4 90 3 4 5 5 7 9 19 30 45 56 59 63 68 76 80 85 86 87 89 89 LCS_GDT K 29 K 29 3 4 90 3 3 4 4 12 20 34 53 55 60 68 73 77 80 82 85 86 87 89 89 LCS_GDT R 30 R 30 3 4 90 3 3 4 4 7 27 48 54 59 63 69 73 77 80 82 85 86 87 89 89 LCS_GDT V 31 V 31 3 12 90 3 3 8 21 37 48 53 58 63 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 32 V 32 8 12 90 4 25 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT Y 33 Y 33 8 12 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 34 V 34 8 12 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT D 35 D 35 8 12 90 7 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 36 G 36 8 12 90 7 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 37 K 37 8 12 90 8 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 38 E 38 8 12 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 39 E 39 8 12 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 40 I 40 7 12 90 3 6 22 41 48 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT R 41 R 41 4 12 90 3 3 10 16 29 41 49 57 63 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 42 K 42 4 12 90 3 3 15 29 38 46 52 58 63 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 43 E 43 5 6 90 3 3 5 6 7 9 15 31 41 47 52 59 65 73 80 85 86 87 89 89 LCS_GDT W 44 W 44 5 6 90 3 4 5 7 19 25 36 46 50 58 63 69 76 80 82 85 86 87 89 89 LCS_GDT M 45 M 45 5 6 90 3 4 7 17 25 31 43 48 54 61 65 71 77 80 82 85 86 87 89 89 LCS_GDT F 46 F 46 5 6 90 3 4 5 17 27 38 46 52 57 66 70 75 77 80 82 85 86 87 89 89 LCS_GDT K 47 K 47 5 6 90 3 4 10 18 25 36 46 54 62 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT L 48 L 48 7 9 90 3 4 7 9 16 21 25 33 38 44 59 74 77 78 81 85 86 87 89 89 LCS_GDT V 49 V 49 7 10 90 5 6 7 13 26 35 51 59 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 50 G 50 7 10 90 5 6 10 31 45 51 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 51 K 51 7 10 90 5 6 7 12 36 50 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 52 E 52 7 10 90 5 6 10 18 29 49 55 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT T 53 T 53 7 10 90 5 6 11 17 26 46 55 60 63 68 71 75 77 80 82 85 86 87 89 89 LCS_GDT F 54 F 54 7 10 90 4 6 9 18 29 42 55 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT Y 55 Y 55 7 10 90 4 5 11 19 26 44 55 60 63 68 72 75 77 80 82 85 86 87 89 89 LCS_GDT V 56 V 56 5 31 90 4 4 6 11 24 31 44 59 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 57 G 57 5 31 90 4 4 6 15 29 38 54 59 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 58 A 58 5 31 90 3 4 6 19 45 49 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 59 A 59 9 31 90 4 12 26 42 47 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 60 K 60 9 31 90 4 6 17 24 45 50 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT T 61 T 61 9 31 90 4 24 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 62 K 62 9 31 90 6 32 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 63 A 63 9 31 90 6 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT T 64 T 64 9 31 90 12 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 65 I 65 11 31 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT N 66 N 66 11 31 90 6 25 38 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 67 I 67 11 31 90 6 25 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT D 68 D 68 11 31 90 6 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 69 A 69 17 31 90 11 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 70 I 70 17 31 90 4 29 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT S 71 S 71 17 31 90 3 9 22 44 51 53 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 72 G 72 17 31 90 4 15 33 44 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT F 73 F 73 17 31 90 3 22 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT A 74 A 74 17 31 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT Y 75 Y 75 17 31 90 14 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 76 E 76 17 31 90 12 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT Y 77 Y 77 17 31 90 14 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT T 78 T 78 17 31 90 6 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT L 79 L 79 17 31 90 8 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT E 80 E 80 17 31 90 8 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT I 81 I 81 17 31 90 8 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT N 82 N 82 17 31 90 4 23 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT G 83 G 83 17 31 90 4 18 35 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 84 K 84 17 31 90 8 29 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT S 85 S 85 17 31 90 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT L 86 L 86 13 31 90 3 6 23 44 50 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 87 K 87 6 30 90 3 5 11 17 26 38 50 57 63 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT K 88 K 88 6 28 90 3 6 13 29 35 47 51 59 63 69 72 75 77 80 82 85 86 87 89 89 LCS_GDT Y 89 Y 89 6 14 90 3 5 6 12 15 18 32 43 49 58 60 65 70 76 82 84 86 87 89 89 LCS_GDT M 90 M 90 3 14 90 0 3 3 4 26 35 50 54 60 64 68 73 77 80 82 85 86 87 89 89 LCS_AVERAGE LCS_A: 44.00 ( 10.00 22.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 33 39 47 51 54 56 60 64 69 72 75 77 80 82 85 86 87 89 89 GDT PERCENT_AT 16.67 36.67 43.33 52.22 56.67 60.00 62.22 66.67 71.11 76.67 80.00 83.33 85.56 88.89 91.11 94.44 95.56 96.67 98.89 98.89 GDT RMS_LOCAL 0.32 0.68 0.83 1.07 1.26 1.47 1.68 2.00 2.30 2.79 2.88 3.08 3.23 3.54 3.78 4.07 4.17 4.28 4.50 4.50 GDT RMS_ALL_AT 4.80 4.87 4.88 4.91 4.97 4.92 4.90 4.97 4.90 4.76 4.78 4.77 4.75 4.71 4.70 4.72 4.71 4.71 4.67 4.67 # Checking swapping # possible swapping detected: E 22 E 22 # possible swapping detected: E 39 E 39 # possible swapping detected: Y 55 Y 55 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 11.445 0 0.148 1.006 15.487 3.690 1.845 LGA T 2 T 2 9.629 0 0.205 1.295 14.091 2.024 1.156 LGA D 3 D 3 8.344 0 0.399 1.071 10.576 10.119 5.119 LGA L 4 L 4 4.644 0 0.494 1.363 10.398 50.833 28.452 LGA V 5 V 5 1.712 0 0.636 0.488 6.482 72.976 52.381 LGA A 6 A 6 0.326 0 0.058 0.059 0.604 100.000 98.095 LGA V 7 V 7 0.591 0 0.037 0.169 0.828 92.857 93.197 LGA W 8 W 8 0.791 0 0.039 0.116 0.830 90.476 92.517 LGA D 9 D 9 0.816 0 0.041 0.240 1.032 90.476 91.726 LGA V 10 V 10 0.829 0 0.104 1.077 3.581 92.857 79.048 LGA A 11 A 11 0.752 0 0.121 0.122 1.568 83.810 85.143 LGA L 12 L 12 2.852 0 0.114 1.013 4.894 47.619 54.881 LGA S 13 S 13 5.867 0 0.424 0.582 8.008 25.357 19.365 LGA D 14 D 14 3.114 0 0.064 1.281 5.850 48.333 39.345 LGA G 15 G 15 2.780 0 0.015 0.015 2.817 59.048 59.048 LGA V 16 V 16 2.482 0 0.139 1.151 3.982 60.952 56.327 LGA H 17 H 17 1.184 0 0.151 1.059 4.147 83.690 69.905 LGA K 18 K 18 1.096 0 0.060 0.929 2.477 81.429 77.725 LGA I 19 I 19 0.937 0 0.124 0.315 1.663 88.214 84.881 LGA E 20 E 20 0.588 0 0.120 1.009 5.119 92.857 69.048 LGA F 21 F 21 0.470 0 0.166 0.243 1.397 97.619 90.606 LGA E 22 E 22 0.902 0 0.043 0.620 1.362 90.476 89.471 LGA H 23 H 23 1.552 0 0.630 0.708 6.765 73.214 49.762 LGA G 24 G 24 2.966 0 0.565 0.565 4.992 46.190 46.190 LGA T 25 T 25 9.283 0 0.233 0.238 12.587 2.976 1.701 LGA T 26 T 26 11.258 0 0.165 0.764 13.239 0.000 0.000 LGA S 27 S 27 10.578 0 0.204 0.253 11.405 0.000 0.317 LGA G 28 G 28 10.156 0 0.233 0.233 10.156 0.833 0.833 LGA K 29 K 29 7.217 0 0.487 1.045 8.268 7.381 7.354 LGA R 30 R 30 6.470 0 0.659 2.006 16.164 17.262 7.316 LGA V 31 V 31 5.282 0 0.393 0.437 7.993 25.238 17.891 LGA V 32 V 32 1.759 0 0.326 0.334 4.443 57.976 58.844 LGA Y 33 Y 33 0.843 0 0.278 1.125 5.970 88.214 64.286 LGA V 34 V 34 0.650 0 0.044 0.289 1.547 95.238 90.680 LGA D 35 D 35 0.828 0 0.030 0.308 1.929 90.476 86.012 LGA G 36 G 36 1.119 0 0.109 0.109 1.677 81.548 81.548 LGA K 37 K 37 0.466 0 0.036 0.879 3.770 92.857 80.582 LGA E 38 E 38 0.653 0 0.090 1.097 5.722 92.857 73.122 LGA E 39 E 39 1.298 0 0.556 0.578 2.608 77.143 73.122 LGA I 40 I 40 3.928 0 0.183 0.163 8.192 31.190 23.690 LGA R 41 R 41 7.185 0 0.459 1.210 14.575 13.333 5.498 LGA K 42 K 42 6.938 0 0.437 1.164 10.857 7.024 7.884 LGA E 43 E 43 12.726 0 0.199 0.753 19.353 0.000 0.000 LGA W 44 W 44 10.498 0 0.491 1.004 14.491 0.833 0.442 LGA M 45 M 45 10.462 0 0.161 1.052 11.431 0.000 0.000 LGA F 46 F 46 9.210 0 0.590 0.444 10.594 1.071 1.905 LGA K 47 K 47 8.784 0 0.089 1.003 8.795 4.405 4.180 LGA L 48 L 48 10.143 0 0.052 0.885 14.446 1.429 0.714 LGA V 49 V 49 5.519 0 0.115 1.116 7.134 21.071 24.014 LGA G 50 G 50 3.317 0 0.138 0.138 3.932 50.119 50.119 LGA K 51 K 51 3.136 0 0.078 1.175 12.572 46.786 26.085 LGA E 52 E 52 4.191 0 0.171 0.426 10.720 41.905 21.111 LGA T 53 T 53 3.861 0 0.221 0.777 8.377 43.452 31.020 LGA F 54 F 54 4.272 0 0.253 1.230 11.081 35.952 15.887 LGA Y 55 Y 55 4.370 0 0.028 1.409 9.866 35.714 23.651 LGA V 56 V 56 5.810 0 0.026 0.057 9.224 22.738 14.626 LGA G 57 G 57 4.968 0 0.197 0.197 5.139 34.524 34.524 LGA A 58 A 58 3.574 0 0.478 0.488 4.451 43.452 42.190 LGA A 59 A 59 2.445 0 0.297 0.279 2.660 64.881 63.333 LGA K 60 K 60 3.521 0 0.022 0.676 10.681 51.905 32.540 LGA T 61 T 61 1.125 0 0.190 0.186 1.907 83.810 84.082 LGA K 62 K 62 0.727 0 0.090 0.288 1.241 88.214 89.524 LGA A 63 A 63 0.991 0 0.086 0.087 1.662 83.810 81.619 LGA T 64 T 64 1.202 0 0.062 0.905 3.856 83.690 76.054 LGA I 65 I 65 1.045 0 0.059 0.156 1.560 81.548 83.750 LGA N 66 N 66 2.037 0 0.142 1.142 4.377 70.833 63.393 LGA I 67 I 67 1.776 0 0.028 0.091 2.029 70.833 70.833 LGA D 68 D 68 1.195 0 0.073 0.882 3.231 81.429 75.476 LGA A 69 A 69 1.974 0 0.012 0.027 2.746 72.857 69.714 LGA I 70 I 70 2.384 0 0.199 1.074 3.058 62.857 59.167 LGA S 71 S 71 4.690 0 0.352 0.609 7.049 26.190 29.921 LGA G 72 G 72 4.523 0 0.587 0.587 4.523 42.024 42.024 LGA F 73 F 73 2.192 0 0.288 0.872 3.820 75.714 57.576 LGA A 74 A 74 1.114 0 0.104 0.126 1.681 79.286 78.000 LGA Y 75 Y 75 0.989 0 0.152 0.229 1.695 83.810 88.254 LGA E 76 E 76 0.784 0 0.089 0.859 4.447 90.476 70.529 LGA Y 77 Y 77 0.848 0 0.029 0.254 1.769 88.214 79.405 LGA T 78 T 78 0.866 0 0.028 0.796 2.493 88.214 82.925 LGA L 79 L 79 0.912 0 0.031 0.192 1.195 90.476 88.214 LGA E 80 E 80 1.080 0 0.013 1.165 4.230 81.429 69.259 LGA I 81 I 81 1.247 0 0.084 0.131 1.463 81.429 81.429 LGA N 82 N 82 1.666 0 0.021 0.916 2.970 75.000 70.952 LGA G 83 G 83 2.132 0 0.227 0.227 2.132 68.810 68.810 LGA K 84 K 84 1.482 0 0.190 0.731 4.980 81.548 65.556 LGA S 85 S 85 0.772 0 0.100 0.585 2.441 77.381 75.873 LGA L 86 L 86 3.107 0 0.021 1.430 8.510 59.405 39.286 LGA K 87 K 87 5.498 0 0.037 0.905 11.390 26.310 13.651 LGA K 88 K 88 4.844 0 0.017 1.143 8.297 18.929 39.947 LGA Y 89 Y 89 9.482 0 0.705 1.187 16.871 4.524 1.508 LGA M 90 M 90 7.110 0 0.185 0.973 9.095 5.238 12.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.659 4.618 5.770 54.347 49.015 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 60 2.00 62.500 53.794 2.857 LGA_LOCAL RMSD: 2.000 Number of atoms: 60 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.974 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.659 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.489380 * X + 0.096662 * Y + 0.866697 * Z + 35.728859 Y_new = -0.101670 * X + 0.993385 * Y + -0.053384 * Z + 20.642633 Z_new = -0.866124 * X + -0.061992 * Y + 0.495970 * Z + 3.193413 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.204839 1.047395 -0.124346 [DEG: -11.7364 60.0113 -7.1245 ] ZXZ: 1.509279 1.051845 -1.642248 [DEG: 86.4753 60.2663 -94.0939 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS127_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS127_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 60 2.00 53.794 4.66 REMARK ---------------------------------------------------------- MOLECULE T0540TS127_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REFINED REMARK PARENT 2KD2_A ATOM 1 N MET 1 28.852 4.322 1.579 1.00 0.00 N ATOM 2 CA MET 1 28.362 5.319 2.560 1.00 0.00 C ATOM 3 C MET 1 29.231 6.592 2.589 1.00 0.00 C ATOM 4 O MET 1 30.290 6.632 3.223 1.00 0.00 O ATOM 5 CB MET 1 28.290 4.694 3.955 1.00 0.00 C ATOM 6 CG MET 1 27.168 5.325 4.767 1.00 0.00 C ATOM 7 SD MET 1 25.463 4.879 4.159 1.00 0.00 S ATOM 8 CE MET 1 25.110 3.343 4.989 1.00 0.00 C ATOM 9 N THR 2 28.680 7.656 2.008 1.00 0.00 N ATOM 10 CA THR 2 29.388 8.930 2.000 1.00 0.00 C ATOM 11 C THR 2 28.713 10.022 2.836 1.00 0.00 C ATOM 12 O THR 2 29.084 11.198 2.666 1.00 0.00 O ATOM 13 CB THR 2 29.589 9.351 0.556 1.00 0.00 C ATOM 14 OG1 THR 2 30.535 10.413 0.410 1.00 0.00 O ATOM 15 CG2 THR 2 28.253 9.704 -0.159 1.00 0.00 C ATOM 16 N ASP 3 27.812 9.714 3.798 1.00 0.00 N ATOM 17 CA ASP 3 27.123 10.642 4.682 1.00 0.00 C ATOM 18 C ASP 3 28.144 11.452 5.502 1.00 0.00 C ATOM 19 O ASP 3 28.105 12.681 5.521 1.00 0.00 O ATOM 20 CB ASP 3 26.190 9.830 5.600 1.00 0.00 C ATOM 21 CG ASP 3 25.379 10.629 6.641 1.00 0.00 C ATOM 22 OD1 ASP 3 24.199 10.276 6.868 1.00 0.00 O ATOM 23 OD2 ASP 3 25.983 11.477 7.324 1.00 0.00 O ATOM 24 N LEU 4 29.145 10.774 6.055 1.00 0.00 N ATOM 25 CA LEU 4 30.125 11.499 6.849 1.00 0.00 C ATOM 26 C LEU 4 31.464 11.766 6.116 1.00 0.00 C ATOM 27 O LEU 4 32.491 11.923 6.777 1.00 0.00 O ATOM 28 CB LEU 4 30.385 10.725 8.140 1.00 0.00 C ATOM 29 CG LEU 4 29.139 10.611 9.028 1.00 0.00 C ATOM 30 CD1 LEU 4 29.402 9.696 10.223 1.00 0.00 C ATOM 31 CD2 LEU 4 28.702 11.996 9.529 1.00 0.00 C ATOM 32 N VAL 5 31.518 11.835 4.779 1.00 0.00 N ATOM 33 CA VAL 5 32.743 12.184 4.042 1.00 0.00 C ATOM 34 C VAL 5 32.378 12.838 2.686 1.00 0.00 C ATOM 35 O VAL 5 31.577 12.336 1.887 1.00 0.00 O ATOM 36 CB VAL 5 33.681 10.974 3.821 1.00 0.00 C ATOM 37 CG1 VAL 5 34.684 10.830 4.975 1.00 0.00 C ATOM 38 CG2 VAL 5 32.946 9.638 3.634 1.00 0.00 C ATOM 39 N ALA 6 32.887 14.044 2.450 1.00 0.00 N ATOM 40 CA ALA 6 32.618 14.822 1.260 1.00 0.00 C ATOM 41 C ALA 6 33.815 14.759 0.319 1.00 0.00 C ATOM 42 O ALA 6 34.930 14.646 0.805 1.00 0.00 O ATOM 43 CB ALA 6 32.295 16.262 1.660 1.00 0.00 C ATOM 44 N VAL 7 33.608 14.745 -1.002 1.00 0.00 N ATOM 45 CA VAL 7 34.670 14.689 -1.993 1.00 0.00 C ATOM 46 C VAL 7 34.301 15.616 -3.139 1.00 0.00 C ATOM 47 O VAL 7 33.112 15.767 -3.422 1.00 0.00 O ATOM 48 CB VAL 7 34.853 13.270 -2.544 1.00 0.00 C ATOM 49 CG1 VAL 7 36.156 13.212 -3.342 1.00 0.00 C ATOM 50 CG2 VAL 7 34.907 12.172 -1.470 1.00 0.00 C ATOM 51 N TRP 8 35.295 16.155 -3.831 1.00 0.00 N ATOM 52 CA TRP 8 35.127 16.999 -4.989 1.00 0.00 C ATOM 53 C TRP 8 36.291 16.686 -5.942 1.00 0.00 C ATOM 54 O TRP 8 37.429 16.542 -5.484 1.00 0.00 O ATOM 55 CB TRP 8 35.209 18.456 -4.516 1.00 0.00 C ATOM 56 CG TRP 8 34.211 18.868 -3.481 1.00 0.00 C ATOM 57 CD1 TRP 8 32.971 19.340 -3.765 1.00 0.00 C ATOM 58 CD2 TRP 8 34.315 18.766 -2.038 1.00 0.00 C ATOM 59 NE1 TRP 8 32.308 19.578 -2.567 1.00 0.00 N ATOM 60 CE2 TRP 8 33.097 19.252 -1.477 1.00 0.00 C ATOM 61 CE3 TRP 8 35.313 18.307 -1.149 1.00 0.00 C ATOM 62 CZ2 TRP 8 32.898 19.317 -0.096 1.00 0.00 C ATOM 63 CZ3 TRP 8 35.121 18.356 0.245 1.00 0.00 C ATOM 64 CH2 TRP 8 33.914 18.869 0.766 1.00 0.00 H ATOM 65 N ASP 9 36.007 16.464 -7.224 1.00 0.00 N ATOM 66 CA ASP 9 37.031 16.215 -8.233 1.00 0.00 C ATOM 67 C ASP 9 37.082 17.436 -9.181 1.00 0.00 C ATOM 68 O ASP 9 36.066 17.824 -9.769 1.00 0.00 O ATOM 69 CB ASP 9 36.749 14.933 -9.020 1.00 0.00 C ATOM 70 CG ASP 9 36.985 13.578 -8.328 1.00 0.00 C ATOM 71 OD1 ASP 9 37.863 13.452 -7.440 1.00 0.00 O ATOM 72 OD2 ASP 9 36.355 12.604 -8.815 1.00 0.00 O ATOM 73 N VAL 10 38.239 18.097 -9.246 1.00 0.00 N ATOM 74 CA VAL 10 38.450 19.328 -10.011 1.00 0.00 C ATOM 75 C VAL 10 39.867 19.314 -10.572 1.00 0.00 C ATOM 76 O VAL 10 40.803 18.798 -9.953 1.00 0.00 O ATOM 77 CB VAL 10 38.252 20.529 -9.073 1.00 0.00 C ATOM 78 CG1 VAL 10 38.542 21.853 -9.764 1.00 0.00 C ATOM 79 CG2 VAL 10 36.839 20.583 -8.511 1.00 0.00 C ATOM 80 N ALA 11 40.070 19.815 -11.792 1.00 0.00 N ATOM 81 CA ALA 11 41.329 19.895 -12.472 1.00 0.00 C ATOM 82 C ALA 11 42.244 20.891 -11.749 1.00 0.00 C ATOM 83 O ALA 11 42.045 22.101 -11.863 1.00 0.00 O ATOM 84 CB ALA 11 41.073 20.356 -13.919 1.00 0.00 C ATOM 85 N LEU 12 43.230 20.402 -11.007 1.00 0.00 N ATOM 86 CA LEU 12 44.129 21.209 -10.212 1.00 0.00 C ATOM 87 C LEU 12 45.463 20.468 -10.175 1.00 0.00 C ATOM 88 O LEU 12 45.513 19.247 -10.061 1.00 0.00 O ATOM 89 CB LEU 12 43.563 21.407 -8.802 1.00 0.00 C ATOM 90 CG LEU 12 43.993 22.715 -8.134 1.00 0.00 C ATOM 91 CD1 LEU 12 42.835 23.184 -7.265 1.00 0.00 C ATOM 92 CD2 LEU 12 45.255 22.533 -7.289 1.00 0.00 C ATOM 93 N SER 13 46.551 21.232 -10.205 1.00 0.00 N ATOM 94 CA SER 13 47.923 20.701 -10.306 1.00 0.00 C ATOM 95 C SER 13 48.096 19.826 -11.585 1.00 0.00 C ATOM 96 O SER 13 48.558 18.681 -11.577 1.00 0.00 O ATOM 97 CB SER 13 48.281 19.890 -9.059 1.00 0.00 C ATOM 98 OG SER 13 48.193 20.640 -7.840 1.00 0.00 O ATOM 99 N ASP 14 47.661 20.379 -12.715 1.00 0.00 N ATOM 100 CA ASP 14 47.797 19.789 -14.039 1.00 0.00 C ATOM 101 C ASP 14 47.137 18.411 -14.210 1.00 0.00 C ATOM 102 O ASP 14 47.576 17.620 -15.070 1.00 0.00 O ATOM 103 CB ASP 14 49.290 19.716 -14.477 1.00 0.00 C ATOM 104 CG ASP 14 50.011 21.056 -14.453 1.00 0.00 C ATOM 105 OD1 ASP 14 49.716 21.909 -15.321 1.00 0.00 O ATOM 106 OD2 ASP 14 50.841 21.265 -13.546 1.00 0.00 O ATOM 107 N GLY 15 46.004 18.131 -13.548 1.00 0.00 N ATOM 108 CA GLY 15 45.377 16.844 -13.675 1.00 0.00 C ATOM 109 C GLY 15 44.147 16.753 -12.761 1.00 0.00 C ATOM 110 O GLY 15 43.689 17.760 -12.230 1.00 0.00 O ATOM 111 N VAL 16 43.548 15.592 -12.555 1.00 0.00 N ATOM 112 CA VAL 16 42.378 15.454 -11.701 1.00 0.00 C ATOM 113 C VAL 16 42.867 15.494 -10.237 1.00 0.00 C ATOM 114 O VAL 16 43.667 14.647 -9.830 1.00 0.00 O ATOM 115 CB VAL 16 41.600 14.155 -12.011 1.00 0.00 C ATOM 116 CG1 VAL 16 40.370 14.072 -11.130 1.00 0.00 C ATOM 117 CG2 VAL 16 41.158 14.090 -13.478 1.00 0.00 C ATOM 118 N HIS 17 42.453 16.524 -9.506 1.00 0.00 N ATOM 119 CA HIS 17 42.786 16.769 -8.113 1.00 0.00 C ATOM 120 C HIS 17 41.598 16.311 -7.256 1.00 0.00 C ATOM 121 O HIS 17 40.467 16.810 -7.399 1.00 0.00 O ATOM 122 CB HIS 17 43.110 18.252 -7.974 1.00 0.00 C ATOM 123 CG HIS 17 43.808 18.673 -6.695 1.00 0.00 C ATOM 124 ND1 HIS 17 45.147 19.060 -6.706 1.00 0.00 N ATOM 125 CD2 HIS 17 43.344 19.161 -5.499 1.00 0.00 C ATOM 126 CE1 HIS 17 45.487 19.444 -5.479 1.00 0.00 C ATOM 127 NE2 HIS 17 44.410 19.592 -4.715 1.00 0.00 N ATOM 128 N LYS 18 41.846 15.261 -6.457 1.00 0.00 N ATOM 129 CA LYS 18 40.838 14.620 -5.622 1.00 0.00 C ATOM 130 C LYS 18 40.829 15.248 -4.238 1.00 0.00 C ATOM 131 O LYS 18 41.822 15.113 -3.540 1.00 0.00 O ATOM 132 CB LYS 18 41.114 13.131 -5.558 1.00 0.00 C ATOM 133 CG LYS 18 39.819 12.307 -5.476 1.00 0.00 C ATOM 134 CD LYS 18 39.271 11.994 -4.091 1.00 0.00 C ATOM 135 CE LYS 18 38.430 10.720 -4.101 1.00 0.00 C ATOM 136 NZ LYS 18 39.173 9.489 -4.434 1.00 0.00 N ATOM 137 N ILE 19 39.725 15.881 -3.820 1.00 0.00 N ATOM 138 CA ILE 19 39.708 16.627 -2.559 1.00 0.00 C ATOM 139 C ILE 19 38.626 16.079 -1.576 1.00 0.00 C ATOM 140 O ILE 19 37.426 16.186 -1.861 1.00 0.00 O ATOM 141 CB ILE 19 39.512 18.146 -2.801 1.00 0.00 C ATOM 142 CG1 ILE 19 40.098 18.622 -4.171 1.00 0.00 C ATOM 143 CG2 ILE 19 40.162 18.900 -1.628 1.00 0.00 C ATOM 144 CD1 ILE 19 40.450 20.104 -4.348 1.00 0.00 C ATOM 145 N GLU 20 39.049 15.480 -0.448 1.00 0.00 N ATOM 146 CA GLU 20 38.180 14.815 0.518 1.00 0.00 C ATOM 147 C GLU 20 38.176 15.447 1.925 1.00 0.00 C ATOM 148 O GLU 20 39.181 15.704 2.580 1.00 0.00 O ATOM 149 CB GLU 20 38.596 13.341 0.580 1.00 0.00 C ATOM 150 CG GLU 20 37.412 12.383 0.683 1.00 0.00 C ATOM 151 CD GLU 20 36.942 12.109 2.096 1.00 0.00 C ATOM 152 OE1 GLU 20 35.918 11.412 2.195 1.00 0.00 O ATOM 153 OE2 GLU 20 37.641 12.549 3.043 1.00 0.00 O ATOM 154 N PHE 21 36.983 15.639 2.423 1.00 0.00 N ATOM 155 CA PHE 21 36.725 16.283 3.662 1.00 0.00 C ATOM 156 C PHE 21 36.162 15.282 4.654 1.00 0.00 C ATOM 157 O PHE 21 34.941 15.064 4.747 1.00 0.00 O ATOM 158 CB PHE 21 35.717 17.368 3.294 1.00 0.00 C ATOM 159 CG PHE 21 35.368 18.281 4.428 1.00 0.00 C ATOM 160 CD1 PHE 21 36.328 19.179 4.921 1.00 0.00 C ATOM 161 CD2 PHE 21 34.108 18.203 5.050 1.00 0.00 C ATOM 162 CE1 PHE 21 35.991 20.115 5.924 1.00 0.00 C ATOM 163 CE2 PHE 21 33.788 19.087 6.108 1.00 0.00 C ATOM 164 CZ PHE 21 34.717 20.064 6.523 1.00 0.00 C ATOM 165 N GLU 22 37.029 14.648 5.468 1.00 0.00 N ATOM 166 CA GLU 22 36.629 13.767 6.539 1.00 0.00 C ATOM 167 C GLU 22 35.800 14.479 7.616 1.00 0.00 C ATOM 168 O GLU 22 36.098 15.603 8.023 1.00 0.00 O ATOM 169 CB GLU 22 37.820 13.143 7.238 1.00 0.00 C ATOM 170 CG GLU 22 37.742 11.646 7.299 1.00 0.00 C ATOM 171 CD GLU 22 38.299 11.265 8.659 1.00 0.00 C ATOM 172 OE1 GLU 22 39.459 10.785 8.678 1.00 0.00 O ATOM 173 OE2 GLU 22 37.598 11.576 9.659 1.00 0.00 O ATOM 174 N HIS 23 34.768 13.828 8.116 1.00 0.00 N ATOM 175 CA HIS 23 33.894 14.423 9.103 1.00 0.00 C ATOM 176 C HIS 23 34.498 14.383 10.495 1.00 0.00 C ATOM 177 O HIS 23 34.439 15.410 11.159 1.00 0.00 O ATOM 178 CB HIS 23 32.501 13.830 9.084 1.00 0.00 C ATOM 179 CG HIS 23 31.525 14.489 8.138 1.00 0.00 C ATOM 180 ND1 HIS 23 31.819 14.797 6.818 1.00 0.00 N ATOM 181 CD2 HIS 23 30.281 15.015 8.333 1.00 0.00 C ATOM 182 CE1 HIS 23 30.761 15.387 6.270 1.00 0.00 C ATOM 183 NE2 HIS 23 29.818 15.599 7.169 1.00 0.00 N ATOM 184 N GLY 24 35.155 13.302 10.929 1.00 0.00 N ATOM 185 CA GLY 24 35.818 13.325 12.236 1.00 0.00 C ATOM 186 C GLY 24 36.770 14.559 12.389 1.00 0.00 C ATOM 187 O GLY 24 36.623 15.389 13.293 1.00 0.00 O ATOM 188 N THR 25 37.745 14.720 11.497 1.00 0.00 N ATOM 189 CA THR 25 38.569 15.905 11.565 1.00 0.00 C ATOM 190 C THR 25 37.786 17.110 11.043 1.00 0.00 C ATOM 191 O THR 25 37.687 18.083 11.776 1.00 0.00 O ATOM 192 CB THR 25 39.909 15.754 10.845 1.00 0.00 C ATOM 193 OG1 THR 25 39.751 15.303 9.502 1.00 0.00 O ATOM 194 CG2 THR 25 40.836 14.768 11.574 1.00 0.00 C ATOM 195 N THR 26 37.270 17.118 9.828 1.00 0.00 N ATOM 196 CA THR 26 36.414 18.171 9.312 1.00 0.00 C ATOM 197 C THR 26 36.983 19.576 9.395 1.00 0.00 C ATOM 198 O THR 26 37.468 20.054 8.372 1.00 0.00 O ATOM 199 CB THR 26 34.977 18.022 9.904 1.00 0.00 C ATOM 200 OG1 THR 26 34.008 18.453 8.962 1.00 0.00 O ATOM 201 CG2 THR 26 34.696 18.747 11.224 1.00 0.00 C ATOM 202 N SER 27 36.940 20.346 10.482 1.00 0.00 N ATOM 203 CA SER 27 37.293 21.736 10.612 1.00 0.00 C ATOM 204 C SER 27 38.539 22.118 9.783 1.00 0.00 C ATOM 205 O SER 27 38.582 23.052 8.975 1.00 0.00 O ATOM 206 CB SER 27 37.493 22.009 12.138 1.00 0.00 C ATOM 207 OG SER 27 38.818 21.730 12.630 1.00 0.00 O ATOM 208 N GLY 28 39.619 21.413 10.075 1.00 0.00 N ATOM 209 CA GLY 28 40.790 21.532 9.262 1.00 0.00 C ATOM 210 C GLY 28 40.664 20.442 8.215 1.00 0.00 C ATOM 211 O GLY 28 41.088 20.645 7.098 1.00 0.00 O ATOM 212 N LYS 29 40.059 19.294 8.561 1.00 0.00 N ATOM 213 CA LYS 29 40.032 18.008 7.860 1.00 0.00 C ATOM 214 C LYS 29 41.435 17.672 7.478 1.00 0.00 C ATOM 215 O LYS 29 41.729 17.045 6.477 1.00 0.00 O ATOM 216 CB LYS 29 39.086 17.831 6.650 1.00 0.00 C ATOM 217 CG LYS 29 39.298 16.489 5.848 1.00 0.00 C ATOM 218 CD LYS 29 39.905 15.203 6.553 1.00 0.00 C ATOM 219 CE LYS 29 40.545 14.118 5.585 1.00 0.00 C ATOM 220 NZ LYS 29 39.646 13.497 4.500 1.00 0.00 N ATOM 221 N ARG 30 42.308 17.979 8.394 1.00 0.00 N ATOM 222 CA ARG 30 43.748 17.982 8.194 1.00 0.00 C ATOM 223 C ARG 30 44.287 18.213 6.775 1.00 0.00 C ATOM 224 O ARG 30 45.494 18.291 6.588 1.00 0.00 O ATOM 225 CB ARG 30 44.324 16.741 8.835 1.00 0.00 C ATOM 226 CG ARG 30 44.939 16.966 10.205 1.00 0.00 C ATOM 227 CD ARG 30 45.824 18.217 10.319 1.00 0.00 C ATOM 228 NE ARG 30 46.701 18.451 9.203 1.00 0.00 N ATOM 229 CZ ARG 30 47.983 18.880 9.240 1.00 0.00 C ATOM 230 NH1 ARG 30 48.537 19.127 10.427 1.00 0.00 H ATOM 231 NH2 ARG 30 48.527 19.094 8.048 1.00 0.00 H ATOM 232 N VAL 31 43.382 18.829 6.033 1.00 0.00 N ATOM 233 CA VAL 31 43.183 19.969 5.206 1.00 0.00 C ATOM 234 C VAL 31 42.615 19.595 3.859 1.00 0.00 C ATOM 235 O VAL 31 42.982 19.956 2.747 1.00 0.00 O ATOM 236 CB VAL 31 44.262 20.924 5.293 1.00 0.00 C ATOM 237 CG1 VAL 31 43.703 22.127 4.567 1.00 0.00 C ATOM 238 CG2 VAL 31 44.466 21.150 6.813 1.00 0.00 C ATOM 239 N VAL 32 41.468 19.034 4.176 1.00 0.00 N ATOM 240 CA VAL 32 40.476 18.404 3.378 1.00 0.00 C ATOM 241 C VAL 32 41.183 17.496 2.371 1.00 0.00 C ATOM 242 O VAL 32 41.012 17.650 1.172 1.00 0.00 O ATOM 243 CB VAL 32 39.629 19.519 2.742 1.00 0.00 C ATOM 244 CG1 VAL 32 38.558 18.980 1.804 1.00 0.00 C ATOM 245 CG2 VAL 32 38.955 20.338 3.846 1.00 0.00 C ATOM 246 N TYR 33 42.053 16.622 2.870 1.00 0.00 N ATOM 247 CA TYR 33 42.723 15.580 2.114 1.00 0.00 C ATOM 248 C TYR 33 43.013 15.883 0.625 1.00 0.00 C ATOM 249 O TYR 33 42.209 15.529 -0.233 1.00 0.00 O ATOM 250 CB TYR 33 41.859 14.313 2.201 1.00 0.00 C ATOM 251 CG TYR 33 42.685 13.051 2.110 1.00 0.00 C ATOM 252 CD1 TYR 33 43.937 13.018 2.766 1.00 0.00 C ATOM 253 CD2 TYR 33 42.111 11.854 1.642 1.00 0.00 C ATOM 254 CE1 TYR 33 44.650 11.791 2.871 1.00 0.00 C ATOM 255 CE2 TYR 33 42.807 10.636 1.752 1.00 0.00 C ATOM 256 CZ TYR 33 44.088 10.611 2.350 1.00 0.00 C ATOM 257 OH TYR 33 44.808 9.466 2.500 1.00 0.00 H ATOM 258 N VAL 34 44.151 16.483 0.279 1.00 0.00 N ATOM 259 CA VAL 34 44.585 16.743 -1.100 1.00 0.00 C ATOM 260 C VAL 34 45.801 15.832 -1.456 1.00 0.00 C ATOM 261 O VAL 34 46.827 15.772 -0.773 1.00 0.00 O ATOM 262 CB VAL 34 44.936 18.249 -1.215 1.00 0.00 C ATOM 263 CG1 VAL 34 45.987 18.604 -2.270 1.00 0.00 C ATOM 264 CG2 VAL 34 43.683 19.076 -1.492 1.00 0.00 C ATOM 265 N ASP 35 45.715 15.108 -2.573 1.00 0.00 N ATOM 266 CA ASP 35 46.792 14.264 -3.121 1.00 0.00 C ATOM 267 C ASP 35 47.386 13.280 -2.080 1.00 0.00 C ATOM 268 O ASP 35 48.610 13.087 -2.059 1.00 0.00 O ATOM 269 CB ASP 35 47.891 15.174 -3.726 1.00 0.00 C ATOM 270 CG ASP 35 47.578 15.578 -5.159 1.00 0.00 C ATOM 271 OD1 ASP 35 46.439 15.354 -5.631 1.00 0.00 O ATOM 272 OD2 ASP 35 48.529 16.049 -5.823 1.00 0.00 O ATOM 273 N GLY 36 46.556 12.575 -1.272 1.00 0.00 N ATOM 274 CA GLY 36 47.129 11.649 -0.294 1.00 0.00 C ATOM 275 C GLY 36 47.989 12.349 0.753 1.00 0.00 C ATOM 276 O GLY 36 48.810 11.708 1.386 1.00 0.00 O ATOM 277 N LYS 37 47.769 13.638 0.985 1.00 0.00 N ATOM 278 CA LYS 37 48.480 14.502 1.904 1.00 0.00 C ATOM 279 C LYS 37 47.453 15.369 2.613 1.00 0.00 C ATOM 280 O LYS 37 46.508 15.877 2.008 1.00 0.00 O ATOM 281 CB LYS 37 49.442 15.383 1.123 1.00 0.00 C ATOM 282 CG LYS 37 50.845 15.660 1.626 1.00 0.00 C ATOM 283 CD LYS 37 51.227 16.883 0.795 1.00 0.00 C ATOM 284 CE LYS 37 50.451 18.138 1.267 1.00 0.00 C ATOM 285 NZ LYS 37 50.071 19.040 0.131 1.00 0.00 N ATOM 286 N GLU 38 47.599 15.449 3.903 1.00 0.00 N ATOM 287 CA GLU 38 46.679 16.154 4.716 1.00 0.00 C ATOM 288 C GLU 38 47.141 17.611 4.610 1.00 0.00 C ATOM 289 O GLU 38 48.226 17.959 5.105 1.00 0.00 O ATOM 290 CB GLU 38 46.917 15.410 6.028 1.00 0.00 C ATOM 291 CG GLU 38 45.754 15.284 6.984 1.00 0.00 C ATOM 292 CD GLU 38 44.437 14.754 6.421 1.00 0.00 C ATOM 293 OE1 GLU 38 44.014 13.654 6.840 1.00 0.00 O ATOM 294 OE2 GLU 38 43.848 15.501 5.609 1.00 0.00 O ATOM 295 N GLU 39 46.381 18.514 3.976 1.00 0.00 N ATOM 296 CA GLU 39 46.768 19.861 3.678 1.00 0.00 C ATOM 297 C GLU 39 46.966 20.750 4.943 1.00 0.00 C ATOM 298 O GLU 39 47.194 20.224 6.034 1.00 0.00 O ATOM 299 CB GLU 39 45.785 20.439 2.678 1.00 0.00 C ATOM 300 CG GLU 39 45.880 19.646 1.368 1.00 0.00 C ATOM 301 CD GLU 39 47.300 19.564 0.915 1.00 0.00 C ATOM 302 OE1 GLU 39 48.145 20.414 1.266 1.00 0.00 O ATOM 303 OE2 GLU 39 47.615 18.542 0.292 1.00 0.00 O ATOM 304 N ILE 40 46.869 22.088 4.844 1.00 0.00 N ATOM 305 CA ILE 40 46.821 23.018 5.977 1.00 0.00 C ATOM 306 C ILE 40 45.618 24.010 5.901 1.00 0.00 C ATOM 307 O ILE 40 45.602 24.903 5.064 1.00 0.00 O ATOM 308 CB ILE 40 48.130 23.820 6.066 1.00 0.00 C ATOM 309 CG1 ILE 40 49.330 22.860 6.175 1.00 0.00 C ATOM 310 CG2 ILE 40 48.081 24.743 7.304 1.00 0.00 C ATOM 311 CD1 ILE 40 50.668 23.562 6.385 1.00 0.00 C ATOM 312 N ARG 41 44.565 23.781 6.691 1.00 0.00 N ATOM 313 CA ARG 41 43.309 24.540 6.869 1.00 0.00 C ATOM 314 C ARG 41 43.840 25.250 8.081 1.00 0.00 C ATOM 315 O ARG 41 44.440 26.296 7.960 1.00 0.00 O ATOM 316 CB ARG 41 41.979 23.765 7.133 1.00 0.00 C ATOM 317 CG ARG 41 40.799 24.065 6.186 1.00 0.00 C ATOM 318 CD ARG 41 41.113 23.886 4.705 1.00 0.00 C ATOM 319 NE ARG 41 40.024 23.779 3.721 1.00 0.00 N ATOM 320 CZ ARG 41 40.057 23.032 2.565 1.00 0.00 C ATOM 321 NH1 ARG 41 41.116 22.263 2.320 1.00 0.00 H ATOM 322 NH2 ARG 41 39.047 23.186 1.766 1.00 0.00 H ATOM 323 N LYS 42 43.951 24.544 9.226 1.00 0.00 N ATOM 324 CA LYS 42 44.440 25.122 10.484 1.00 0.00 C ATOM 325 C LYS 42 43.914 26.571 10.599 1.00 0.00 C ATOM 326 O LYS 42 44.539 27.485 11.125 1.00 0.00 O ATOM 327 CB LYS 42 45.972 25.072 10.469 1.00 0.00 C ATOM 328 CG LYS 42 46.622 23.786 11.052 1.00 0.00 C ATOM 329 CD LYS 42 48.101 23.608 10.527 1.00 0.00 C ATOM 330 CE LYS 42 49.188 24.623 11.034 1.00 0.00 C ATOM 331 NZ LYS 42 49.034 26.005 10.468 1.00 0.00 N ATOM 332 N GLU 43 42.767 26.753 10.001 1.00 0.00 N ATOM 333 CA GLU 43 42.064 27.993 9.974 1.00 0.00 C ATOM 334 C GLU 43 40.926 27.699 10.930 1.00 0.00 C ATOM 335 O GLU 43 40.764 28.398 11.922 1.00 0.00 O ATOM 336 CB GLU 43 41.637 28.301 8.551 1.00 0.00 C ATOM 337 CG GLU 43 42.482 29.446 7.980 1.00 0.00 C ATOM 338 CD GLU 43 42.307 30.816 8.633 1.00 0.00 C ATOM 339 OE1 GLU 43 43.053 31.730 8.202 1.00 0.00 O ATOM 340 OE2 GLU 43 41.496 30.924 9.579 1.00 0.00 O ATOM 341 N TRP 44 40.260 26.559 10.697 1.00 0.00 N ATOM 342 CA TRP 44 39.212 26.019 11.545 1.00 0.00 C ATOM 343 C TRP 44 38.334 27.121 12.195 1.00 0.00 C ATOM 344 O TRP 44 37.834 26.994 13.326 1.00 0.00 O ATOM 345 CB TRP 44 39.885 25.103 12.616 1.00 0.00 C ATOM 346 CG TRP 44 40.897 25.695 13.544 1.00 0.00 C ATOM 347 CD1 TRP 44 42.222 25.855 13.276 1.00 0.00 C ATOM 348 CD2 TRP 44 40.686 26.174 14.900 1.00 0.00 C ATOM 349 NE1 TRP 44 42.835 26.435 14.378 1.00 0.00 N ATOM 350 CE2 TRP 44 41.935 26.651 15.404 1.00 0.00 C ATOM 351 CE3 TRP 44 39.566 26.239 15.763 1.00 0.00 C ATOM 352 CZ2 TRP 44 42.054 27.184 16.698 1.00 0.00 C ATOM 353 CZ3 TRP 44 39.674 26.753 17.074 1.00 0.00 C ATOM 354 CH2 TRP 44 40.920 27.238 17.529 1.00 0.00 H ATOM 355 N MET 45 38.030 28.200 11.455 1.00 0.00 N ATOM 356 CA MET 45 37.326 29.343 11.981 1.00 0.00 C ATOM 357 C MET 45 35.856 28.972 12.259 1.00 0.00 C ATOM 358 O MET 45 35.080 28.603 11.377 1.00 0.00 O ATOM 359 CB MET 45 37.434 30.533 11.040 1.00 0.00 C ATOM 360 CG MET 45 37.420 31.829 11.831 1.00 0.00 C ATOM 361 SD MET 45 37.350 33.354 10.841 1.00 0.00 S ATOM 362 CE MET 45 38.987 33.390 10.012 1.00 0.00 C ATOM 363 N PHE 46 35.498 29.000 13.519 1.00 0.00 N ATOM 364 CA PHE 46 34.141 28.736 13.944 1.00 0.00 C ATOM 365 C PHE 46 33.384 30.050 14.075 1.00 0.00 C ATOM 366 O PHE 46 33.479 30.727 15.107 1.00 0.00 O ATOM 367 CB PHE 46 34.233 27.944 15.263 1.00 0.00 C ATOM 368 CG PHE 46 34.510 26.449 15.200 1.00 0.00 C ATOM 369 CD1 PHE 46 35.817 25.961 15.003 1.00 0.00 C ATOM 370 CD2 PHE 46 33.423 25.552 15.198 1.00 0.00 C ATOM 371 CE1 PHE 46 36.049 24.580 14.857 1.00 0.00 C ATOM 372 CE2 PHE 46 33.636 24.168 15.026 1.00 0.00 C ATOM 373 CZ PHE 46 34.955 23.679 14.869 1.00 0.00 C ATOM 374 N LYS 47 32.665 30.393 13.028 1.00 0.00 N ATOM 375 CA LYS 47 31.753 31.533 12.970 1.00 0.00 C ATOM 376 C LYS 47 30.507 31.177 13.709 1.00 0.00 C ATOM 377 O LYS 47 30.302 29.975 13.989 1.00 0.00 O ATOM 378 CB LYS 47 31.333 31.848 11.546 1.00 0.00 C ATOM 379 CG LYS 47 32.393 32.024 10.439 1.00 0.00 C ATOM 380 CD LYS 47 33.201 33.292 10.491 1.00 0.00 C ATOM 381 CE LYS 47 33.769 33.721 9.090 1.00 0.00 C ATOM 382 NZ LYS 47 32.753 34.293 8.177 1.00 0.00 N ATOM 383 N LEU 48 29.627 32.101 14.097 1.00 0.00 N ATOM 384 CA LEU 48 28.368 31.987 14.758 1.00 0.00 C ATOM 385 C LEU 48 27.502 30.937 14.033 1.00 0.00 C ATOM 386 O LEU 48 26.865 30.171 14.749 1.00 0.00 O ATOM 387 CB LEU 48 27.706 33.366 14.786 1.00 0.00 C ATOM 388 CG LEU 48 26.435 33.528 15.639 1.00 0.00 C ATOM 389 CD1 LEU 48 25.182 32.975 14.950 1.00 0.00 C ATOM 390 CD2 LEU 48 26.598 32.869 17.018 1.00 0.00 C ATOM 391 N VAL 49 27.420 30.916 12.689 1.00 0.00 N ATOM 392 CA VAL 49 26.752 29.818 11.946 1.00 0.00 C ATOM 393 C VAL 49 27.668 29.389 10.791 1.00 0.00 C ATOM 394 O VAL 49 28.096 30.205 9.982 1.00 0.00 O ATOM 395 CB VAL 49 25.379 30.245 11.388 1.00 0.00 C ATOM 396 CG1 VAL 49 24.712 29.107 10.619 1.00 0.00 C ATOM 397 CG2 VAL 49 24.410 30.701 12.486 1.00 0.00 C ATOM 398 N GLY 50 28.032 28.109 10.804 1.00 0.00 N ATOM 399 CA GLY 50 28.873 27.470 9.805 1.00 0.00 C ATOM 400 C GLY 50 30.353 27.597 10.146 1.00 0.00 C ATOM 401 O GLY 50 30.734 28.230 11.128 1.00 0.00 O ATOM 402 N LYS 51 31.179 26.904 9.372 1.00 0.00 N ATOM 403 CA LYS 51 32.619 26.863 9.493 1.00 0.00 C ATOM 404 C LYS 51 33.241 27.290 8.174 1.00 0.00 C ATOM 405 O LYS 51 32.738 26.918 7.119 1.00 0.00 O ATOM 406 CB LYS 51 33.140 25.457 9.845 1.00 0.00 C ATOM 407 CG LYS 51 32.938 25.083 11.324 1.00 0.00 C ATOM 408 CD LYS 51 31.474 25.265 11.766 1.00 0.00 C ATOM 409 CE LYS 51 30.635 23.971 11.962 1.00 0.00 C ATOM 410 NZ LYS 51 30.632 23.054 10.834 1.00 0.00 N ATOM 411 N GLU 52 34.330 28.047 8.250 1.00 0.00 N ATOM 412 CA GLU 52 35.137 28.478 7.120 1.00 0.00 C ATOM 413 C GLU 52 36.494 27.806 7.163 1.00 0.00 C ATOM 414 O GLU 52 37.359 28.125 7.978 1.00 0.00 O ATOM 415 CB GLU 52 35.302 29.983 7.185 1.00 0.00 C ATOM 416 CG GLU 52 34.073 30.735 6.742 1.00 0.00 C ATOM 417 CD GLU 52 33.950 30.900 5.241 1.00 0.00 C ATOM 418 OE1 GLU 52 34.640 30.172 4.495 1.00 0.00 O ATOM 419 OE2 GLU 52 33.106 31.761 4.896 1.00 0.00 O ATOM 420 N THR 53 36.694 26.809 6.324 1.00 0.00 N ATOM 421 CA THR 53 37.864 25.969 6.198 1.00 0.00 C ATOM 422 C THR 53 38.880 26.614 5.233 1.00 0.00 C ATOM 423 O THR 53 38.835 26.374 4.023 1.00 0.00 O ATOM 424 CB THR 53 37.462 24.566 5.694 1.00 0.00 C ATOM 425 OG1 THR 53 36.374 24.508 4.790 1.00 0.00 O ATOM 426 CG2 THR 53 37.055 23.635 6.806 1.00 0.00 C ATOM 427 N PHE 54 39.870 27.349 5.737 1.00 0.00 N ATOM 428 CA PHE 54 40.833 28.013 4.862 1.00 0.00 C ATOM 429 C PHE 54 42.161 27.274 4.776 1.00 0.00 C ATOM 430 O PHE 54 42.858 27.055 5.760 1.00 0.00 O ATOM 431 CB PHE 54 41.074 29.474 5.266 1.00 0.00 C ATOM 432 CG PHE 54 39.849 30.304 5.602 1.00 0.00 C ATOM 433 CD1 PHE 54 39.121 30.981 4.599 1.00 0.00 C ATOM 434 CD2 PHE 54 39.481 30.469 6.956 1.00 0.00 C ATOM 435 CE1 PHE 54 38.028 31.808 4.942 1.00 0.00 C ATOM 436 CE2 PHE 54 38.405 31.311 7.303 1.00 0.00 C ATOM 437 CZ PHE 54 37.680 31.979 6.296 1.00 0.00 C ATOM 438 N TYR 55 42.440 26.770 3.578 1.00 0.00 N ATOM 439 CA TYR 55 43.686 26.132 3.259 1.00 0.00 C ATOM 440 C TYR 55 44.288 26.743 2.006 1.00 0.00 C ATOM 441 O TYR 55 43.631 26.941 0.991 1.00 0.00 O ATOM 442 CB TYR 55 43.429 24.657 3.011 1.00 0.00 C ATOM 443 CG TYR 55 44.098 24.020 1.810 1.00 0.00 C ATOM 444 CD1 TYR 55 45.479 23.732 1.825 1.00 0.00 C ATOM 445 CD2 TYR 55 43.341 23.701 0.666 1.00 0.00 C ATOM 446 CE1 TYR 55 46.093 23.120 0.691 1.00 0.00 C ATOM 447 CE2 TYR 55 43.939 23.096 -0.457 1.00 0.00 C ATOM 448 CZ TYR 55 45.323 22.812 -0.450 1.00 0.00 C ATOM 449 OH TYR 55 45.944 22.192 -1.497 1.00 0.00 H ATOM 450 N VAL 56 45.563 27.068 2.023 1.00 0.00 N ATOM 451 CA VAL 56 46.130 27.562 0.795 1.00 0.00 C ATOM 452 C VAL 56 46.875 26.420 0.088 1.00 0.00 C ATOM 453 O VAL 56 47.782 25.817 0.658 1.00 0.00 O ATOM 454 CB VAL 56 47.064 28.731 1.130 1.00 0.00 C ATOM 455 CG1 VAL 56 47.706 29.276 -0.143 1.00 0.00 C ATOM 456 CG2 VAL 56 46.346 29.882 1.851 1.00 0.00 C ATOM 457 N GLY 57 46.608 26.198 -1.193 1.00 0.00 N ATOM 458 CA GLY 57 47.353 25.180 -1.907 1.00 0.00 C ATOM 459 C GLY 57 48.070 25.791 -3.104 1.00 0.00 C ATOM 460 O GLY 57 47.483 26.560 -3.874 1.00 0.00 O ATOM 461 N ALA 58 49.345 25.393 -3.200 1.00 0.00 N ATOM 462 CA ALA 58 50.352 25.611 -4.248 1.00 0.00 C ATOM 463 C ALA 58 50.611 27.091 -4.402 1.00 0.00 C ATOM 464 O ALA 58 50.934 27.719 -3.388 1.00 0.00 O ATOM 465 CB ALA 58 49.926 24.924 -5.574 1.00 0.00 C ATOM 466 N ALA 59 50.468 27.698 -5.585 1.00 0.00 N ATOM 467 CA ALA 59 50.780 29.095 -5.897 1.00 0.00 C ATOM 468 C ALA 59 49.633 29.995 -5.469 1.00 0.00 C ATOM 469 O ALA 59 49.007 30.696 -6.252 1.00 0.00 O ATOM 470 CB ALA 59 51.065 29.221 -7.409 1.00 0.00 C ATOM 471 N LYS 60 49.386 29.929 -4.171 1.00 0.00 N ATOM 472 CA LYS 60 48.305 30.615 -3.511 1.00 0.00 C ATOM 473 C LYS 60 47.016 30.433 -4.345 1.00 0.00 C ATOM 474 O LYS 60 46.351 31.414 -4.656 1.00 0.00 O ATOM 475 CB LYS 60 48.684 32.091 -3.397 1.00 0.00 C ATOM 476 CG LYS 60 50.077 32.405 -2.871 1.00 0.00 C ATOM 477 CD LYS 60 50.180 32.319 -1.351 1.00 0.00 C ATOM 478 CE LYS 60 51.320 33.130 -0.745 1.00 0.00 C ATOM 479 NZ LYS 60 51.156 34.623 -0.864 1.00 0.00 N ATOM 480 N THR 61 46.716 29.229 -4.829 1.00 0.00 N ATOM 481 CA THR 61 45.447 28.998 -5.454 1.00 0.00 C ATOM 482 C THR 61 44.534 28.800 -4.234 1.00 0.00 C ATOM 483 O THR 61 44.289 27.659 -3.827 1.00 0.00 O ATOM 484 CB THR 61 45.488 27.787 -6.391 1.00 0.00 C ATOM 485 OG1 THR 61 46.381 28.062 -7.487 1.00 0.00 O ATOM 486 CG2 THR 61 44.084 27.472 -6.971 1.00 0.00 C ATOM 487 N LYS 62 44.210 29.908 -3.538 1.00 0.00 N ATOM 488 CA LYS 62 43.354 29.791 -2.392 1.00 0.00 C ATOM 489 C LYS 62 42.054 29.088 -2.787 1.00 0.00 C ATOM 490 O LYS 62 41.241 29.612 -3.543 1.00 0.00 O ATOM 491 CB LYS 62 43.058 31.180 -1.789 1.00 0.00 C ATOM 492 CG LYS 62 41.924 31.074 -0.735 1.00 0.00 C ATOM 493 CD LYS 62 41.434 32.338 -0.039 1.00 0.00 C ATOM 494 CE LYS 62 40.339 32.187 1.053 1.00 0.00 C ATOM 495 NZ LYS 62 39.771 33.473 1.519 1.00 0.00 N ATOM 496 N ALA 63 41.866 27.940 -2.173 1.00 0.00 N ATOM 497 CA ALA 63 40.699 27.110 -2.271 1.00 0.00 C ATOM 498 C ALA 63 40.378 26.657 -0.856 1.00 0.00 C ATOM 499 O ALA 63 41.212 26.102 -0.150 1.00 0.00 O ATOM 500 CB ALA 63 41.022 25.909 -3.182 1.00 0.00 C ATOM 501 N THR 64 39.192 27.004 -0.426 1.00 0.00 N ATOM 502 CA THR 64 38.700 26.944 0.930 1.00 0.00 C ATOM 503 C THR 64 37.320 26.269 0.848 1.00 0.00 C ATOM 504 O THR 64 36.637 26.495 -0.146 1.00 0.00 O ATOM 505 CB THR 64 38.616 28.384 1.417 1.00 0.00 C ATOM 506 OG1 THR 64 38.332 29.231 0.291 1.00 0.00 O ATOM 507 CG2 THR 64 39.961 28.811 2.056 1.00 0.00 C ATOM 508 N ILE 65 36.946 25.363 1.767 1.00 0.00 N ATOM 509 CA ILE 65 35.601 24.771 1.718 1.00 0.00 C ATOM 510 C ILE 65 34.633 25.731 2.419 1.00 0.00 C ATOM 511 O ILE 65 34.960 26.246 3.483 1.00 0.00 O ATOM 512 CB ILE 65 35.521 23.365 2.328 1.00 0.00 C ATOM 513 CG1 ILE 65 36.076 22.347 1.332 1.00 0.00 C ATOM 514 CG2 ILE 65 34.078 22.949 2.694 1.00 0.00 C ATOM 515 CD1 ILE 65 36.171 20.964 1.941 1.00 0.00 C ATOM 516 N ASN 66 33.448 25.932 1.868 1.00 0.00 N ATOM 517 CA ASN 66 32.399 26.757 2.445 1.00 0.00 C ATOM 518 C ASN 66 31.471 25.845 3.262 1.00 0.00 C ATOM 519 O ASN 66 30.739 25.059 2.676 1.00 0.00 O ATOM 520 CB ASN 66 31.653 27.486 1.306 1.00 0.00 C ATOM 521 CG ASN 66 30.386 28.244 1.738 1.00 0.00 C ATOM 522 OD1 ASN 66 29.317 28.009 1.196 1.00 0.00 O ATOM 523 ND2 ASN 66 30.420 29.160 2.704 1.00 0.00 N ATOM 524 N ILE 67 31.621 25.725 4.582 1.00 0.00 N ATOM 525 CA ILE 67 30.814 24.864 5.448 1.00 0.00 C ATOM 526 C ILE 67 29.560 25.601 5.909 1.00 0.00 C ATOM 527 O ILE 67 29.672 26.683 6.470 1.00 0.00 O ATOM 528 CB ILE 67 31.637 24.445 6.680 1.00 0.00 C ATOM 529 CG1 ILE 67 32.869 23.636 6.260 1.00 0.00 C ATOM 530 CG2 ILE 67 30.793 23.653 7.676 1.00 0.00 C ATOM 531 CD1 ILE 67 33.885 23.405 7.373 1.00 0.00 C ATOM 532 N ASP 68 28.413 24.948 5.895 1.00 0.00 N ATOM 533 CA ASP 68 27.152 25.524 6.307 1.00 0.00 C ATOM 534 C ASP 68 26.394 24.602 7.278 1.00 0.00 C ATOM 535 O ASP 68 26.199 23.406 7.016 1.00 0.00 O ATOM 536 CB ASP 68 26.324 25.772 5.051 1.00 0.00 C ATOM 537 CG ASP 68 25.054 26.562 5.349 1.00 0.00 C ATOM 538 OD1 ASP 68 24.927 27.066 6.487 1.00 0.00 O ATOM 539 OD2 ASP 68 24.189 26.611 4.444 1.00 0.00 O ATOM 540 N ALA 69 26.019 25.091 8.465 1.00 0.00 N ATOM 541 CA ALA 69 25.214 24.368 9.437 1.00 0.00 C ATOM 542 C ALA 69 23.722 24.453 9.111 1.00 0.00 C ATOM 543 O ALA 69 23.243 25.498 8.685 1.00 0.00 O ATOM 544 CB ALA 69 25.501 24.956 10.810 1.00 0.00 C ATOM 545 N ILE 70 22.954 23.380 9.292 1.00 0.00 N ATOM 546 CA ILE 70 21.575 23.386 8.856 1.00 0.00 C ATOM 547 C ILE 70 20.665 22.879 9.968 1.00 0.00 C ATOM 548 O ILE 70 20.875 21.797 10.492 1.00 0.00 O ATOM 549 CB ILE 70 21.520 22.495 7.610 1.00 0.00 C ATOM 550 CG1 ILE 70 22.477 23.031 6.518 1.00 0.00 C ATOM 551 CG2 ILE 70 20.097 22.404 7.027 1.00 0.00 C ATOM 552 CD1 ILE 70 22.866 22.020 5.440 1.00 0.00 C ATOM 553 N SER 71 19.724 23.720 10.415 1.00 0.00 N ATOM 554 CA SER 71 18.643 23.439 11.364 1.00 0.00 C ATOM 555 C SER 71 18.963 22.323 12.365 1.00 0.00 C ATOM 556 O SER 71 19.753 22.523 13.280 1.00 0.00 O ATOM 557 CB SER 71 17.350 23.144 10.542 1.00 0.00 C ATOM 558 OG SER 71 17.472 21.981 9.710 1.00 0.00 O ATOM 559 N GLY 72 18.332 21.157 12.238 1.00 0.00 N ATOM 560 CA GLY 72 18.669 19.995 13.027 1.00 0.00 C ATOM 561 C GLY 72 19.929 19.417 12.398 1.00 0.00 C ATOM 562 O GLY 72 20.079 19.445 11.179 1.00 0.00 O ATOM 563 N PHE 73 20.729 18.725 13.196 1.00 0.00 N ATOM 564 CA PHE 73 22.061 18.289 12.820 1.00 0.00 C ATOM 565 C PHE 73 22.161 17.765 11.395 1.00 0.00 C ATOM 566 O PHE 73 21.974 16.587 11.093 1.00 0.00 O ATOM 567 CB PHE 73 22.538 17.222 13.785 1.00 0.00 C ATOM 568 CG PHE 73 23.004 17.706 15.145 1.00 0.00 C ATOM 569 CD1 PHE 73 22.403 18.824 15.757 1.00 0.00 C ATOM 570 CD2 PHE 73 24.175 17.156 15.711 1.00 0.00 C ATOM 571 CE1 PHE 73 22.930 19.354 16.952 1.00 0.00 C ATOM 572 CE2 PHE 73 24.716 17.702 16.897 1.00 0.00 C ATOM 573 CZ PHE 73 24.088 18.795 17.531 1.00 0.00 C ATOM 574 N ALA 74 22.609 18.680 10.548 1.00 0.00 N ATOM 575 CA ALA 74 22.899 18.487 9.155 1.00 0.00 C ATOM 576 C ALA 74 23.887 19.588 8.778 1.00 0.00 C ATOM 577 O ALA 74 23.798 20.721 9.261 1.00 0.00 O ATOM 578 CB ALA 74 21.628 18.566 8.295 1.00 0.00 C ATOM 579 N TYR 75 24.915 19.221 8.011 1.00 0.00 N ATOM 580 CA TYR 75 25.989 20.116 7.640 1.00 0.00 C ATOM 581 C TYR 75 26.482 19.901 6.207 1.00 0.00 C ATOM 582 O TYR 75 26.959 18.823 5.844 1.00 0.00 O ATOM 583 CB TYR 75 27.151 19.855 8.611 1.00 0.00 C ATOM 584 CG TYR 75 26.877 19.970 10.096 1.00 0.00 C ATOM 585 CD1 TYR 75 26.816 21.245 10.695 1.00 0.00 C ATOM 586 CD2 TYR 75 26.476 18.837 10.833 1.00 0.00 C ATOM 587 CE1 TYR 75 26.369 21.378 12.037 1.00 0.00 C ATOM 588 CE2 TYR 75 26.040 18.962 12.168 1.00 0.00 C ATOM 589 CZ TYR 75 25.973 20.242 12.764 1.00 0.00 C ATOM 590 OH TYR 75 25.532 20.441 14.036 1.00 0.00 H ATOM 591 N GLU 76 26.479 20.970 5.417 1.00 0.00 N ATOM 592 CA GLU 76 26.887 20.872 4.033 1.00 0.00 C ATOM 593 C GLU 76 28.208 21.637 3.808 1.00 0.00 C ATOM 594 O GLU 76 28.417 22.786 4.195 1.00 0.00 O ATOM 595 CB GLU 76 25.788 21.362 3.076 1.00 0.00 C ATOM 596 CG GLU 76 26.242 21.406 1.610 1.00 0.00 C ATOM 597 CD GLU 76 25.381 20.556 0.684 1.00 0.00 C ATOM 598 OE1 GLU 76 24.163 20.470 0.971 1.00 0.00 O ATOM 599 OE2 GLU 76 25.969 19.917 -0.214 1.00 0.00 O ATOM 600 N TYR 77 29.191 20.909 3.317 1.00 0.00 N ATOM 601 CA TYR 77 30.493 21.399 2.964 1.00 0.00 C ATOM 602 C TYR 77 30.569 21.529 1.443 1.00 0.00 C ATOM 603 O TYR 77 30.383 20.540 0.738 1.00 0.00 O ATOM 604 CB TYR 77 31.507 20.400 3.530 1.00 0.00 C ATOM 605 CG TYR 77 31.170 20.006 4.955 1.00 0.00 C ATOM 606 CD1 TYR 77 31.183 20.971 5.977 1.00 0.00 C ATOM 607 CD2 TYR 77 30.672 18.725 5.219 1.00 0.00 C ATOM 608 CE1 TYR 77 30.844 20.600 7.309 1.00 0.00 C ATOM 609 CE2 TYR 77 30.272 18.381 6.522 1.00 0.00 C ATOM 610 CZ TYR 77 30.403 19.297 7.588 1.00 0.00 C ATOM 611 OH TYR 77 30.107 18.966 8.872 1.00 0.00 H ATOM 612 N THR 78 30.827 22.730 0.926 1.00 0.00 N ATOM 613 CA THR 78 30.930 23.012 -0.512 1.00 0.00 C ATOM 614 C THR 78 32.350 23.453 -0.860 1.00 0.00 C ATOM 615 O THR 78 32.844 24.442 -0.325 1.00 0.00 O ATOM 616 CB THR 78 29.931 24.106 -0.940 1.00 0.00 C ATOM 617 OG1 THR 78 29.624 25.010 0.121 1.00 0.00 O ATOM 618 CG2 THR 78 28.624 23.443 -1.428 1.00 0.00 C ATOM 619 N LEU 79 33.117 22.663 -1.610 1.00 0.00 N ATOM 620 CA LEU 79 34.475 23.024 -1.898 1.00 0.00 C ATOM 621 C LEU 79 34.497 24.210 -2.878 1.00 0.00 C ATOM 622 O LEU 79 33.746 24.236 -3.847 1.00 0.00 O ATOM 623 CB LEU 79 35.219 21.795 -2.414 1.00 0.00 C ATOM 624 CG LEU 79 36.638 22.037 -2.935 1.00 0.00 C ATOM 625 CD1 LEU 79 37.539 22.705 -1.901 1.00 0.00 C ATOM 626 CD2 LEU 79 37.281 20.734 -3.374 1.00 0.00 C ATOM 627 N GLU 80 35.362 25.193 -2.603 1.00 0.00 N ATOM 628 CA GLU 80 35.569 26.414 -3.367 1.00 0.00 C ATOM 629 C GLU 80 37.038 26.538 -3.793 1.00 0.00 C ATOM 630 O GLU 80 37.965 26.416 -2.989 1.00 0.00 O ATOM 631 CB GLU 80 35.141 27.578 -2.488 1.00 0.00 C ATOM 632 CG GLU 80 33.625 27.622 -2.248 1.00 0.00 C ATOM 633 CD GLU 80 32.905 28.022 -3.534 1.00 0.00 C ATOM 634 OE1 GLU 80 33.522 28.766 -4.328 1.00 0.00 O ATOM 635 OE2 GLU 80 31.754 27.579 -3.730 1.00 0.00 O ATOM 636 N ILE 81 37.290 26.727 -5.086 1.00 0.00 N ATOM 637 CA ILE 81 38.632 26.955 -5.611 1.00 0.00 C ATOM 638 C ILE 81 38.579 28.200 -6.503 1.00 0.00 C ATOM 639 O ILE 81 37.928 28.226 -7.538 1.00 0.00 O ATOM 640 CB ILE 81 39.178 25.762 -6.425 1.00 0.00 C ATOM 641 CG1 ILE 81 39.349 24.513 -5.558 1.00 0.00 C ATOM 642 CG2 ILE 81 40.533 26.097 -7.068 1.00 0.00 C ATOM 643 CD1 ILE 81 39.394 23.220 -6.366 1.00 0.00 C ATOM 644 N ASN 82 39.341 29.218 -6.132 1.00 0.00 N ATOM 645 CA ASN 82 39.449 30.502 -6.799 1.00 0.00 C ATOM 646 C ASN 82 38.074 31.181 -6.947 1.00 0.00 C ATOM 647 O ASN 82 37.731 31.727 -8.002 1.00 0.00 O ATOM 648 CB ASN 82 40.182 30.359 -8.148 1.00 0.00 C ATOM 649 CG ASN 82 41.037 31.599 -8.433 1.00 0.00 C ATOM 650 OD1 ASN 82 40.546 32.719 -8.437 1.00 0.00 O ATOM 651 ND2 ASN 82 42.351 31.472 -8.588 1.00 0.00 N ATOM 652 N GLY 83 37.313 31.144 -5.837 1.00 0.00 N ATOM 653 CA GLY 83 35.980 31.707 -5.722 1.00 0.00 C ATOM 654 C GLY 83 35.008 31.059 -6.702 1.00 0.00 C ATOM 655 O GLY 83 34.224 31.760 -7.332 1.00 0.00 O ATOM 656 N LYS 84 35.092 29.743 -6.870 1.00 0.00 N ATOM 657 CA LYS 84 34.275 29.008 -7.830 1.00 0.00 C ATOM 658 C LYS 84 33.724 27.770 -7.187 1.00 0.00 C ATOM 659 O LYS 84 34.493 26.833 -6.898 1.00 0.00 O ATOM 660 CB LYS 84 35.189 28.620 -9.010 1.00 0.00 C ATOM 661 CG LYS 84 34.868 29.452 -10.279 1.00 0.00 C ATOM 662 CD LYS 84 35.365 30.855 -10.005 1.00 0.00 C ATOM 663 CE LYS 84 35.045 31.984 -10.999 1.00 0.00 C ATOM 664 NZ LYS 84 35.699 33.239 -10.596 1.00 0.00 N ATOM 665 N SER 85 32.414 27.691 -7.007 1.00 0.00 N ATOM 666 CA SER 85 31.825 26.552 -6.353 1.00 0.00 C ATOM 667 C SER 85 32.164 25.209 -7.068 1.00 0.00 C ATOM 668 O SER 85 32.168 25.157 -8.288 1.00 0.00 O ATOM 669 CB SER 85 30.283 26.770 -6.353 1.00 0.00 C ATOM 670 OG SER 85 30.029 28.166 -6.301 1.00 0.00 O ATOM 671 N LEU 86 32.422 24.160 -6.328 1.00 0.00 N ATOM 672 CA LEU 86 32.867 22.889 -6.858 1.00 0.00 C ATOM 673 C LEU 86 31.935 21.801 -6.396 1.00 0.00 C ATOM 674 O LEU 86 31.726 21.650 -5.188 1.00 0.00 O ATOM 675 CB LEU 86 34.253 22.642 -6.303 1.00 0.00 C ATOM 676 CG LEU 86 35.166 23.810 -6.648 1.00 0.00 C ATOM 677 CD1 LEU 86 36.335 23.750 -5.727 1.00 0.00 C ATOM 678 CD2 LEU 86 35.596 23.792 -8.091 1.00 0.00 C ATOM 679 N LYS 87 31.347 21.102 -7.350 1.00 0.00 N ATOM 680 CA LYS 87 30.367 20.074 -7.215 1.00 0.00 C ATOM 681 C LYS 87 31.010 18.844 -6.525 1.00 0.00 C ATOM 682 O LYS 87 32.133 18.445 -6.830 1.00 0.00 O ATOM 683 CB LYS 87 29.760 19.657 -8.562 1.00 0.00 C ATOM 684 CG LYS 87 28.356 20.190 -8.946 1.00 0.00 C ATOM 685 CD LYS 87 27.960 19.835 -10.359 1.00 0.00 C ATOM 686 CE LYS 87 26.429 19.629 -10.531 1.00 0.00 C ATOM 687 NZ LYS 87 26.052 19.180 -11.877 1.00 0.00 N ATOM 688 N LYS 88 30.288 18.317 -5.566 1.00 0.00 N ATOM 689 CA LYS 88 30.632 17.180 -4.720 1.00 0.00 C ATOM 690 C LYS 88 30.180 15.914 -5.444 1.00 0.00 C ATOM 691 O LYS 88 29.206 15.969 -6.233 1.00 0.00 O ATOM 692 CB LYS 88 29.919 17.362 -3.357 1.00 0.00 C ATOM 693 CG LYS 88 30.442 16.528 -2.130 1.00 0.00 C ATOM 694 CD LYS 88 29.726 15.162 -1.926 1.00 0.00 C ATOM 695 CE LYS 88 30.165 14.386 -0.664 1.00 0.00 C ATOM 696 NZ LYS 88 29.705 12.983 -0.553 1.00 0.00 N ATOM 697 N TYR 89 30.843 14.807 -5.136 1.00 0.00 N ATOM 698 CA TYR 89 30.502 13.518 -5.691 1.00 0.00 C ATOM 699 C TYR 89 29.035 13.069 -5.516 1.00 0.00 C ATOM 700 O TYR 89 28.587 12.319 -6.393 1.00 0.00 O ATOM 701 CB TYR 89 31.463 12.480 -5.065 1.00 0.00 C ATOM 702 CG TYR 89 31.742 11.225 -5.862 1.00 0.00 C ATOM 703 CD1 TYR 89 30.838 10.138 -5.867 1.00 0.00 C ATOM 704 CD2 TYR 89 32.901 11.150 -6.652 1.00 0.00 C ATOM 705 CE1 TYR 89 31.146 8.947 -6.595 1.00 0.00 C ATOM 706 CE2 TYR 89 33.194 9.995 -7.409 1.00 0.00 C ATOM 707 CZ TYR 89 32.320 8.880 -7.385 1.00 0.00 C ATOM 708 OH TYR 89 32.520 7.778 -8.171 1.00 0.00 H ATOM 709 N MET 90 28.423 13.259 -4.315 1.00 0.00 N ATOM 710 CA MET 90 27.043 12.869 -4.093 1.00 0.00 C ATOM 711 C MET 90 26.124 13.611 -5.113 1.00 0.00 C ATOM 712 O MET 90 26.195 14.857 -5.117 1.00 0.00 O ATOM 713 CB MET 90 26.562 13.113 -2.676 1.00 0.00 C ATOM 714 CG MET 90 25.963 14.474 -2.334 1.00 0.00 C ATOM 715 SD MET 90 26.638 15.138 -0.864 1.00 0.00 S ATOM 716 CE MET 90 26.013 14.013 0.384 1.00 0.00 C ATOM 717 OXT MET 90 25.355 12.927 -5.816 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 63.70 48.3 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 51.58 58.5 118 100.0 118 ARMSMC SURFACE . . . . . . . . 64.47 46.3 108 100.0 108 ARMSMC BURIED . . . . . . . . 62.50 51.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.56 36.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 82.73 31.8 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 73.39 40.4 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 94.28 22.7 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 58.98 54.8 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.58 49.1 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 75.50 50.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 67.69 56.4 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 82.26 33.3 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 58.20 72.7 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.36 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 77.36 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 71.95 35.3 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 71.73 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 92.19 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 107.50 15.4 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 107.50 15.4 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 105.77 20.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 109.77 18.2 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 94.05 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.66 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.66 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0518 CRMSCA SECONDARY STRUCTURE . . 2.93 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.17 55 100.0 55 CRMSCA BURIED . . . . . . . . 3.71 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.76 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.19 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.22 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.92 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.76 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.85 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.42 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.57 204 100.0 204 CRMSSC BURIED . . . . . . . . 5.48 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.78 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.44 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.39 424 100.0 424 CRMSALL BURIED . . . . . . . . 4.76 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.738 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.431 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.269 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.905 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.815 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.588 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.290 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 3.078 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.436 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.475 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 4.259 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.330 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 4.236 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.577 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.413 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.214 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.652 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 9 36 46 65 88 90 90 DISTCA CA (P) 10.00 40.00 51.11 72.22 97.78 90 DISTCA CA (RMS) 0.85 1.33 1.63 2.62 4.39 DISTCA ALL (N) 41 234 327 446 652 716 716 DISTALL ALL (P) 5.73 32.68 45.67 62.29 91.06 716 DISTALL ALL (RMS) 0.75 1.38 1.76 2.58 4.59 DISTALL END of the results output