####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 87 ( 697), selected 87 , name T0540TS117_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 87 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS117_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 87 1 - 90 4.49 4.49 LCS_AVERAGE: 96.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 2 - 25 1.81 6.14 LCS_AVERAGE: 18.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.98 5.33 LCS_AVERAGE: 9.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 87 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 87 0 3 3 5 5 5 8 9 9 13 13 17 38 46 48 66 70 73 79 83 LCS_GDT T 2 T 2 3 24 87 0 3 3 10 18 31 48 53 61 65 70 72 76 78 82 82 84 84 85 85 LCS_GDT D 3 D 3 4 24 87 3 4 10 23 37 46 57 61 66 68 73 76 77 80 82 82 84 84 85 85 LCS_GDT L 4 L 4 4 24 87 3 4 4 6 25 40 57 61 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 5 V 5 8 24 87 4 15 29 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT A 6 A 6 8 24 87 6 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 7 V 7 8 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT W 8 W 8 8 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT D 9 D 9 8 24 87 13 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 10 V 10 8 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT A 11 A 11 8 24 87 7 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT L 12 L 12 8 24 87 5 10 23 40 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT S 13 S 13 4 24 87 3 6 12 24 37 43 50 58 63 68 72 76 78 80 82 82 84 84 85 85 LCS_GDT D 14 D 14 12 24 87 11 24 34 44 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 15 G 15 12 24 87 5 15 34 44 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 16 V 16 12 24 87 11 24 34 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT H 17 H 17 12 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 18 K 18 12 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 19 I 19 12 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 20 E 20 12 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT F 21 F 21 12 24 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 22 E 22 12 24 87 5 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT H 23 H 23 12 24 87 6 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 24 G 24 12 24 87 7 25 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 25 T 25 12 24 87 4 9 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 26 T 26 3 5 87 3 3 4 5 5 6 6 12 24 48 62 70 78 80 82 82 84 84 85 85 LCS_GDT S 27 S 27 3 5 87 3 3 4 6 11 20 28 41 62 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 28 G 28 3 10 87 3 3 4 14 19 39 57 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 29 K 29 4 10 87 3 6 13 23 37 46 56 63 65 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT R 30 R 30 4 10 87 3 8 24 37 46 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 31 V 31 4 10 87 3 4 8 23 37 45 58 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 32 V 32 6 10 87 4 13 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT Y 33 Y 33 6 10 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 34 V 34 6 10 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT D 35 D 35 6 10 87 4 21 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 36 G 36 6 10 87 4 7 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 37 K 37 6 10 87 7 25 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 39 E 39 4 8 87 3 14 28 40 50 56 59 62 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 40 I 40 5 8 87 3 8 25 39 46 54 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT R 41 R 41 5 8 87 3 4 6 15 27 31 43 51 64 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 42 K 42 5 8 87 3 4 7 18 27 31 38 50 60 68 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 43 E 43 5 8 87 3 5 6 7 8 9 25 30 36 45 51 53 65 72 79 82 82 84 85 85 LCS_GDT W 44 W 44 5 8 87 3 5 6 15 23 30 34 42 49 59 70 76 78 80 82 82 84 84 85 85 LCS_GDT M 45 M 45 5 8 87 3 5 10 20 23 31 38 47 57 65 72 76 78 80 82 82 84 84 85 85 LCS_GDT F 46 F 46 5 8 87 3 5 10 20 27 34 42 51 62 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 47 K 47 5 6 87 3 5 10 20 31 41 50 56 64 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT L 48 L 48 6 8 87 3 4 7 8 12 18 28 32 46 56 67 75 78 80 82 82 84 84 85 85 LCS_GDT V 49 V 49 6 20 87 5 5 15 24 36 48 56 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 50 G 50 6 20 87 5 16 30 43 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 51 K 51 6 20 87 5 5 12 28 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 52 E 52 6 20 87 5 5 16 27 36 50 56 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 53 T 53 6 20 87 5 11 32 44 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT F 54 F 54 6 20 87 4 16 22 43 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT Y 55 Y 55 6 20 87 4 16 22 43 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT V 56 V 56 5 20 87 4 16 32 44 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 57 G 57 5 20 87 3 5 19 28 38 50 57 61 66 69 72 76 78 80 82 82 84 84 85 85 LCS_GDT K 60 K 60 10 20 87 2 15 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 61 T 61 10 20 87 4 16 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 62 K 62 10 20 87 5 22 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT A 63 A 63 10 20 87 5 16 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 64 T 64 10 20 87 6 26 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 65 I 65 10 20 87 8 26 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT N 66 N 66 10 20 87 4 22 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 67 I 67 10 20 87 5 24 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT D 68 D 68 10 20 87 6 25 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT A 69 A 69 10 20 87 10 24 34 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 70 I 70 5 20 87 3 5 8 34 46 51 57 60 64 68 72 75 78 79 82 82 84 84 85 85 LCS_GDT S 71 S 71 5 16 87 3 5 8 12 18 23 31 53 59 64 70 70 76 78 80 82 84 84 85 85 LCS_GDT G 72 G 72 5 16 87 3 5 8 12 18 22 27 45 59 64 70 70 76 78 80 82 84 84 85 85 LCS_GDT F 73 F 73 14 16 87 5 13 35 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT A 74 A 74 14 16 87 7 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT Y 75 Y 75 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 76 E 76 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT Y 77 Y 77 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT T 78 T 78 14 16 87 8 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT L 79 L 79 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT E 80 E 80 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT I 81 I 81 14 16 87 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT N 82 N 82 14 16 87 8 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT G 83 G 83 14 16 87 8 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 84 K 84 14 16 87 8 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT S 85 S 85 14 16 87 9 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT L 86 L 86 14 15 87 2 5 23 42 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 87 K 87 4 15 87 0 4 6 12 15 37 42 52 63 69 73 76 78 80 82 82 84 84 85 85 LCS_GDT K 88 K 88 4 12 87 0 4 6 12 17 23 39 48 59 67 73 76 78 80 82 82 84 84 85 85 LCS_GDT Y 89 Y 89 3 12 87 0 3 3 6 12 22 29 42 48 63 67 71 78 80 82 82 84 84 85 85 LCS_GDT M 90 M 90 3 3 87 0 3 3 3 3 4 6 14 16 19 20 30 50 56 72 76 81 81 82 83 LCS_AVERAGE LCS_A: 41.48 ( 9.07 18.70 96.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 27 36 45 53 56 59 63 66 69 73 76 78 80 82 82 84 84 85 85 GDT PERCENT_AT 16.67 30.00 40.00 50.00 58.89 62.22 65.56 70.00 73.33 76.67 81.11 84.44 86.67 88.89 91.11 91.11 93.33 93.33 94.44 94.44 GDT RMS_LOCAL 0.28 0.59 0.91 1.15 1.43 1.53 1.69 2.07 2.19 2.67 2.97 3.16 3.37 3.56 3.68 3.68 3.90 3.90 4.05 4.05 GDT RMS_ALL_AT 4.87 5.07 4.94 4.88 4.86 4.84 4.82 4.68 4.74 4.56 4.54 4.53 4.53 4.52 4.51 4.51 4.51 4.51 4.51 4.51 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: F 21 F 21 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 12.724 0 0.450 1.048 16.918 0.000 0.000 LGA T 2 T 2 7.488 0 0.681 1.425 10.043 16.071 9.660 LGA D 3 D 3 4.907 0 0.599 0.671 6.336 24.286 33.571 LGA L 4 L 4 4.796 0 0.100 1.398 10.388 50.119 27.143 LGA V 5 V 5 2.341 0 0.692 1.435 6.427 64.881 45.714 LGA A 6 A 6 1.028 0 0.024 0.036 1.289 85.952 85.048 LGA V 7 V 7 0.879 0 0.079 0.066 1.003 90.476 89.184 LGA W 8 W 8 0.856 0 0.098 0.124 1.869 88.214 82.177 LGA D 9 D 9 0.719 0 0.109 0.931 3.347 92.857 79.226 LGA V 10 V 10 0.457 0 0.095 0.162 0.916 95.238 93.197 LGA A 11 A 11 0.444 0 0.130 0.126 1.542 88.571 88.952 LGA L 12 L 12 2.745 0 0.080 1.392 4.574 51.071 55.060 LGA S 13 S 13 5.778 0 0.324 0.569 7.912 26.429 20.476 LGA D 14 D 14 2.394 0 0.052 1.214 5.205 61.071 47.798 LGA G 15 G 15 2.237 0 0.045 0.045 2.247 68.810 68.810 LGA V 16 V 16 1.922 0 0.224 1.191 3.517 61.429 59.796 LGA H 17 H 17 1.201 0 0.092 1.249 6.174 83.690 61.810 LGA K 18 K 18 1.120 0 0.038 0.859 3.116 81.429 76.085 LGA I 19 I 19 0.911 0 0.095 0.160 1.028 88.214 89.345 LGA E 20 E 20 0.871 0 0.127 0.708 3.599 86.071 69.577 LGA F 21 F 21 0.724 0 0.031 1.138 5.051 90.476 70.909 LGA E 22 E 22 1.664 0 0.099 0.613 2.079 72.976 74.815 LGA H 23 H 23 2.091 0 0.057 0.984 6.548 66.786 50.571 LGA G 24 G 24 2.601 0 0.572 0.572 5.694 48.333 48.333 LGA T 25 T 25 2.419 0 0.255 0.263 4.606 51.548 58.776 LGA T 26 T 26 8.619 0 0.285 1.232 12.771 6.310 3.605 LGA S 27 S 27 6.809 0 0.091 0.120 6.809 19.762 20.635 LGA G 28 G 28 3.992 0 0.558 0.558 4.573 40.357 40.357 LGA K 29 K 29 5.144 0 0.463 1.397 14.006 27.024 14.286 LGA R 30 R 30 3.191 0 0.204 1.065 11.981 46.786 26.407 LGA V 31 V 31 4.276 0 0.324 0.467 8.875 56.667 35.714 LGA V 32 V 32 1.737 0 0.272 1.071 4.211 70.833 60.068 LGA Y 33 Y 33 1.188 0 0.082 0.122 1.921 79.286 85.238 LGA V 34 V 34 0.984 0 0.051 1.095 2.594 88.214 80.748 LGA D 35 D 35 1.056 0 0.124 0.958 4.173 83.690 68.333 LGA G 36 G 36 1.586 0 0.166 0.166 2.352 72.976 72.976 LGA K 37 K 37 0.666 0 0.031 0.220 1.479 92.857 89.524 LGA E 39 E 39 3.984 0 0.552 1.183 9.881 41.786 22.487 LGA I 40 I 40 3.544 0 0.210 1.098 5.531 40.476 36.488 LGA R 41 R 41 6.417 0 0.036 1.370 17.133 17.262 6.710 LGA K 42 K 42 7.328 0 0.216 0.844 10.349 6.190 27.725 LGA E 43 E 43 12.314 0 0.142 1.080 19.932 0.000 0.000 LGA W 44 W 44 9.553 0 0.545 1.329 11.557 2.619 2.585 LGA M 45 M 45 8.971 0 0.309 0.732 9.575 1.905 2.202 LGA F 46 F 46 7.865 0 0.609 1.417 9.516 4.881 6.104 LGA K 47 K 47 7.498 0 0.103 0.947 7.935 10.833 10.053 LGA L 48 L 48 9.024 0 0.052 0.236 15.627 5.119 2.560 LGA V 49 V 49 4.890 0 0.269 1.149 6.300 26.786 28.776 LGA G 50 G 50 2.609 0 0.080 0.080 3.742 55.595 55.595 LGA K 51 K 51 2.491 0 0.045 0.632 12.352 57.500 34.709 LGA E 52 E 52 4.037 0 0.084 1.124 9.918 42.143 21.270 LGA T 53 T 53 2.308 0 0.263 1.042 6.602 55.952 45.374 LGA F 54 F 54 2.411 0 0.036 0.117 2.444 64.762 65.498 LGA Y 55 Y 55 2.565 0 0.024 0.236 3.002 57.143 56.548 LGA V 56 V 56 2.390 0 0.175 0.179 2.779 62.857 64.830 LGA G 57 G 57 4.428 0 0.372 0.372 4.428 38.690 38.690 LGA K 60 K 60 1.269 0 0.311 0.803 9.375 77.262 47.196 LGA T 61 T 61 1.693 0 0.174 1.133 2.832 72.976 68.435 LGA K 62 K 62 1.340 0 0.047 0.754 5.597 79.286 59.735 LGA A 63 A 63 1.417 0 0.149 0.223 1.772 79.286 79.714 LGA T 64 T 64 0.560 0 0.055 0.983 2.772 95.238 85.918 LGA I 65 I 65 0.158 0 0.117 0.653 2.032 97.619 90.893 LGA N 66 N 66 1.159 0 0.256 0.928 3.401 83.690 73.512 LGA I 67 I 67 0.960 0 0.071 0.130 1.641 81.548 86.012 LGA D 68 D 68 0.516 0 0.036 0.141 1.954 88.214 83.810 LGA A 69 A 69 2.068 0 0.041 0.051 3.121 63.333 60.667 LGA I 70 I 70 4.867 0 0.265 1.080 6.830 33.333 28.214 LGA S 71 S 71 8.715 0 0.307 0.759 10.843 2.857 2.143 LGA G 72 G 72 9.057 0 0.084 0.084 9.057 7.738 7.738 LGA F 73 F 73 2.111 0 0.507 1.123 7.774 64.048 47.619 LGA A 74 A 74 1.021 0 0.133 0.177 1.502 83.810 83.333 LGA Y 75 Y 75 0.535 0 0.057 0.148 1.016 90.476 91.310 LGA E 76 E 76 0.523 0 0.183 0.800 1.774 95.238 88.624 LGA Y 77 Y 77 0.540 0 0.083 0.195 3.093 90.476 80.635 LGA T 78 T 78 0.923 0 0.031 0.038 1.479 90.476 86.599 LGA L 79 L 79 0.730 0 0.025 0.112 0.859 90.476 90.476 LGA E 80 E 80 0.760 0 0.054 0.152 1.460 88.214 85.450 LGA I 81 I 81 1.106 0 0.032 0.075 1.352 83.690 85.952 LGA N 82 N 82 1.928 0 0.117 0.122 2.698 66.905 73.155 LGA G 83 G 83 2.337 0 0.111 0.111 2.337 64.762 64.762 LGA K 84 K 84 1.708 0 0.105 1.074 3.164 79.405 70.688 LGA S 85 S 85 0.804 0 0.032 0.061 2.465 77.381 78.810 LGA L 86 L 86 2.639 0 0.669 0.526 5.804 49.286 53.333 LGA K 87 K 87 6.377 0 0.610 0.860 11.576 22.143 10.688 LGA K 88 K 88 6.975 0 0.666 1.290 9.024 8.810 32.751 LGA Y 89 Y 89 8.807 0 0.689 1.299 10.505 2.619 17.183 LGA M 90 M 90 14.715 0 0.693 1.217 21.518 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 87 348 348 100.00 697 697 100.00 90 SUMMARY(RMSD_GDC): 4.494 4.484 5.429 54.698 50.305 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 87 90 4.0 63 2.07 60.278 52.774 2.905 LGA_LOCAL RMSD: 2.069 Number of atoms: 63 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.682 Number of assigned atoms: 87 Std_ASGN_ATOMS RMSD: 4.494 Standard rmsd on all 87 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.876680 * X + -0.274754 * Y + 0.394895 * Z + 28.731474 Y_new = -0.288305 * X + 0.357061 * Y + 0.888475 * Z + -0.966860 Z_new = -0.385113 * X + -0.892759 * Y + 0.233815 * Z + 10.503362 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.317719 0.395330 -1.314648 [DEG: -18.2039 22.6508 -75.3238 ] ZXZ: 2.723352 1.334797 -2.734335 [DEG: 156.0366 76.4782 -156.6659 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS117_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS117_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 87 90 4.0 63 2.07 52.774 4.49 REMARK ---------------------------------------------------------- MOLECULE T0540TS117_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 28.731 -0.967 10.503 1.00 0.00 N ATOM 2 CA MET 1 29.304 0.321 10.842 1.00 0.00 C ATOM 3 C MET 1 29.080 1.234 9.648 1.00 0.00 C ATOM 4 O MET 1 28.786 0.747 8.554 1.00 0.00 O ATOM 5 CB MET 1 30.801 0.184 11.130 1.00 0.00 C ATOM 6 CG MET 1 31.120 -0.531 12.433 1.00 0.00 C ATOM 7 SD MET 1 32.887 -0.583 12.783 1.00 0.00 S ATOM 8 CE MET 1 32.898 -1.464 14.342 1.00 0.00 C ATOM 9 N THR 2 29.219 2.540 9.866 1.00 0.00 N ATOM 10 CA THR 2 29.045 3.560 8.847 1.00 0.00 C ATOM 11 C THR 2 29.742 4.823 9.356 1.00 0.00 C ATOM 12 O THR 2 30.180 4.875 10.508 1.00 0.00 O ATOM 13 CB THR 2 27.555 3.855 8.591 1.00 0.00 C ATOM 14 OG1 THR 2 27.423 4.692 7.437 1.00 0.00 O ATOM 15 CG2 THR 2 26.941 4.565 9.788 1.00 0.00 C ATOM 16 N ASP 3 29.849 5.844 8.502 1.00 0.00 N ATOM 17 CA ASP 3 30.462 7.122 8.837 1.00 0.00 C ATOM 18 C ASP 3 30.175 8.080 7.692 1.00 0.00 C ATOM 19 O ASP 3 29.938 7.639 6.562 1.00 0.00 O ATOM 20 CB ASP 3 31.974 6.960 9.018 1.00 0.00 C ATOM 21 CG ASP 3 32.580 8.065 9.861 1.00 0.00 C ATOM 22 OD1 ASP 3 31.831 8.968 10.285 1.00 0.00 O ATOM 23 OD2 ASP 3 33.807 8.026 10.095 1.00 0.00 O ATOM 24 N LEU 4 30.189 9.388 7.950 1.00 0.00 N ATOM 25 CA LEU 4 30.020 10.363 6.886 1.00 0.00 C ATOM 26 C LEU 4 31.356 10.668 6.209 1.00 0.00 C ATOM 27 O LEU 4 32.412 10.633 6.843 1.00 0.00 O ATOM 28 CB LEU 4 29.455 11.671 7.442 1.00 0.00 C ATOM 29 CG LEU 4 28.081 11.587 8.109 1.00 0.00 C ATOM 30 CD1 LEU 4 27.681 12.935 8.689 1.00 0.00 C ATOM 31 CD2 LEU 4 27.019 11.169 7.102 1.00 0.00 C ATOM 32 N VAL 5 31.322 10.975 4.909 1.00 0.00 N ATOM 33 CA VAL 5 32.512 11.304 4.133 1.00 0.00 C ATOM 34 C VAL 5 32.087 12.205 2.974 1.00 0.00 C ATOM 35 O VAL 5 30.999 12.031 2.422 1.00 0.00 O ATOM 36 CB VAL 5 33.187 10.039 3.570 1.00 0.00 C ATOM 37 CG1 VAL 5 32.251 9.319 2.612 1.00 0.00 C ATOM 38 CG2 VAL 5 34.457 10.404 2.817 1.00 0.00 C ATOM 39 N ALA 6 32.927 13.171 2.591 1.00 0.00 N ATOM 40 CA ALA 6 32.634 14.057 1.473 1.00 0.00 C ATOM 41 C ALA 6 33.771 14.043 0.464 1.00 0.00 C ATOM 42 O ALA 6 34.939 13.992 0.858 1.00 0.00 O ATOM 43 CB ALA 6 32.446 15.484 1.963 1.00 0.00 C ATOM 44 N VAL 7 33.459 14.088 -0.835 1.00 0.00 N ATOM 45 CA VAL 7 34.467 13.993 -1.884 1.00 0.00 C ATOM 46 C VAL 7 34.143 14.923 -3.051 1.00 0.00 C ATOM 47 O VAL 7 33.020 14.968 -3.558 1.00 0.00 O ATOM 48 CB VAL 7 34.563 12.563 -2.446 1.00 0.00 C ATOM 49 CG1 VAL 7 35.613 12.491 -3.545 1.00 0.00 C ATOM 50 CG2 VAL 7 34.950 11.584 -1.348 1.00 0.00 C ATOM 51 N TRP 8 35.165 15.669 -3.471 1.00 0.00 N ATOM 52 CA TRP 8 35.065 16.661 -4.530 1.00 0.00 C ATOM 53 C TRP 8 36.252 16.480 -5.468 1.00 0.00 C ATOM 54 O TRP 8 37.281 15.924 -5.063 1.00 0.00 O ATOM 55 CB TRP 8 35.086 18.074 -3.944 1.00 0.00 C ATOM 56 CG TRP 8 33.900 18.384 -3.083 1.00 0.00 C ATOM 57 CD1 TRP 8 32.723 18.950 -3.481 1.00 0.00 C ATOM 58 CD2 TRP 8 33.776 18.145 -1.676 1.00 0.00 C ATOM 59 NE1 TRP 8 31.873 19.078 -2.409 1.00 0.00 N ATOM 60 CE2 TRP 8 32.497 18.591 -1.288 1.00 0.00 C ATOM 61 CE3 TRP 8 34.621 17.599 -0.705 1.00 0.00 C ATOM 62 CZ2 TRP 8 32.043 18.507 0.027 1.00 0.00 C ATOM 63 CZ3 TRP 8 34.167 17.516 0.597 1.00 0.00 C ATOM 64 CH2 TRP 8 32.891 17.967 0.955 1.00 0.00 H ATOM 65 N ASP 9 36.162 16.929 -6.726 1.00 0.00 N ATOM 66 CA ASP 9 37.190 16.625 -7.714 1.00 0.00 C ATOM 67 C ASP 9 37.325 17.725 -8.765 1.00 0.00 C ATOM 68 O ASP 9 36.428 17.901 -9.595 1.00 0.00 O ATOM 69 CB ASP 9 36.859 15.325 -8.448 1.00 0.00 C ATOM 70 CG ASP 9 37.924 14.938 -9.456 1.00 0.00 C ATOM 71 OD1 ASP 9 39.118 14.939 -9.088 1.00 0.00 O ATOM 72 OD2 ASP 9 37.565 14.633 -10.612 1.00 0.00 O ATOM 73 N VAL 10 38.433 18.478 -8.750 1.00 0.00 N ATOM 74 CA VAL 10 38.616 19.662 -9.596 1.00 0.00 C ATOM 75 C VAL 10 39.977 19.594 -10.282 1.00 0.00 C ATOM 76 O VAL 10 40.927 19.048 -9.722 1.00 0.00 O ATOM 77 CB VAL 10 38.551 20.961 -8.771 1.00 0.00 C ATOM 78 CG1 VAL 10 37.181 21.118 -8.133 1.00 0.00 C ATOM 79 CG2 VAL 10 39.597 20.943 -7.667 1.00 0.00 C ATOM 80 N ALA 11 40.101 20.142 -11.498 1.00 0.00 N ATOM 81 CA ALA 11 41.398 20.323 -12.135 1.00 0.00 C ATOM 82 C ALA 11 42.256 21.350 -11.392 1.00 0.00 C ATOM 83 O ALA 11 42.010 22.555 -11.430 1.00 0.00 O ATOM 84 CB ALA 11 41.223 20.810 -13.565 1.00 0.00 C ATOM 85 N LEU 12 43.284 20.851 -10.706 1.00 0.00 N ATOM 86 CA LEU 12 44.169 21.651 -9.868 1.00 0.00 C ATOM 87 C LEU 12 45.532 20.972 -9.967 1.00 0.00 C ATOM 88 O LEU 12 45.610 19.756 -10.159 1.00 0.00 O ATOM 89 CB LEU 12 43.665 21.672 -8.423 1.00 0.00 C ATOM 90 CG LEU 12 44.528 22.432 -7.415 1.00 0.00 C ATOM 91 CD1 LEU 12 44.475 23.929 -7.682 1.00 0.00 C ATOM 92 CD2 LEU 12 44.040 22.185 -5.995 1.00 0.00 C ATOM 93 N SER 13 46.630 21.733 -9.839 1.00 0.00 N ATOM 94 CA SER 13 48.003 21.220 -9.866 1.00 0.00 C ATOM 95 C SER 13 48.353 20.532 -11.194 1.00 0.00 C ATOM 96 O SER 13 49.183 19.624 -11.274 1.00 0.00 O ATOM 97 CB SER 13 48.213 20.192 -8.752 1.00 0.00 C ATOM 98 OG SER 13 47.985 20.766 -7.478 1.00 0.00 O ATOM 99 N ASP 14 47.689 20.992 -12.270 1.00 0.00 N ATOM 100 CA ASP 14 47.767 20.435 -13.620 1.00 0.00 C ATOM 101 C ASP 14 47.305 18.977 -13.735 1.00 0.00 C ATOM 102 O ASP 14 47.684 18.239 -14.646 1.00 0.00 O ATOM 103 CB ASP 14 49.209 20.472 -14.131 1.00 0.00 C ATOM 104 CG ASP 14 49.735 21.883 -14.290 1.00 0.00 C ATOM 105 OD1 ASP 14 49.042 22.709 -14.921 1.00 0.00 O ATOM 106 OD2 ASP 14 50.842 22.166 -13.784 1.00 0.00 O ATOM 107 N GLY 15 46.467 18.540 -12.794 1.00 0.00 N ATOM 108 CA GLY 15 45.871 17.219 -12.823 1.00 0.00 C ATOM 109 C GLY 15 44.436 17.316 -12.333 1.00 0.00 C ATOM 110 O GLY 15 43.940 18.407 -12.049 1.00 0.00 O ATOM 111 N VAL 16 43.740 16.187 -12.222 1.00 0.00 N ATOM 112 CA VAL 16 42.384 16.205 -11.699 1.00 0.00 C ATOM 113 C VAL 16 42.511 15.772 -10.242 1.00 0.00 C ATOM 114 O VAL 16 42.626 14.587 -9.920 1.00 0.00 O ATOM 115 CB VAL 16 41.468 15.241 -12.475 1.00 0.00 C ATOM 116 CG1 VAL 16 40.061 15.261 -11.895 1.00 0.00 C ATOM 117 CG2 VAL 16 41.390 15.642 -13.939 1.00 0.00 C ATOM 118 N HIS 17 42.487 16.769 -9.357 1.00 0.00 N ATOM 119 CA HIS 17 42.802 16.590 -7.952 1.00 0.00 C ATOM 120 C HIS 17 41.549 16.240 -7.156 1.00 0.00 C ATOM 121 O HIS 17 40.465 16.793 -7.346 1.00 0.00 O ATOM 122 CB HIS 17 43.397 17.873 -7.369 1.00 0.00 C ATOM 123 CG HIS 17 43.924 17.716 -5.976 1.00 0.00 C ATOM 124 ND1 HIS 17 43.118 17.803 -4.861 1.00 0.00 N ATOM 125 CD2 HIS 17 45.228 17.463 -5.381 1.00 0.00 C ATOM 126 CE1 HIS 17 43.870 17.620 -3.762 1.00 0.00 C ATOM 127 NE2 HIS 17 45.138 17.416 -4.066 1.00 0.00 N ATOM 128 N LYS 18 41.754 15.286 -6.248 1.00 0.00 N ATOM 129 CA LYS 18 40.692 14.640 -5.503 1.00 0.00 C ATOM 130 C LYS 18 40.810 15.108 -4.057 1.00 0.00 C ATOM 131 O LYS 18 41.830 14.901 -3.393 1.00 0.00 O ATOM 132 CB LYS 18 40.833 13.118 -5.578 1.00 0.00 C ATOM 133 CG LYS 18 39.716 12.356 -4.884 1.00 0.00 C ATOM 134 CD LYS 18 39.939 10.855 -4.965 1.00 0.00 C ATOM 135 CE LYS 18 38.823 10.093 -4.266 1.00 0.00 C ATOM 136 NZ LYS 18 39.014 8.619 -4.363 1.00 0.00 N ATOM 137 N ILE 19 39.739 15.746 -3.585 1.00 0.00 N ATOM 138 CA ILE 19 39.701 16.442 -2.307 1.00 0.00 C ATOM 139 C ILE 19 38.627 15.783 -1.437 1.00 0.00 C ATOM 140 O ILE 19 37.440 15.843 -1.767 1.00 0.00 O ATOM 141 CB ILE 19 39.361 17.934 -2.486 1.00 0.00 C ATOM 142 CG1 ILE 19 40.403 18.616 -3.374 1.00 0.00 C ATOM 143 CG2 ILE 19 39.336 18.640 -1.139 1.00 0.00 C ATOM 144 CD1 ILE 19 40.051 20.040 -3.746 1.00 0.00 C ATOM 145 N GLU 20 39.003 15.145 -0.318 1.00 0.00 N ATOM 146 CA GLU 20 38.054 14.365 0.483 1.00 0.00 C ATOM 147 C GLU 20 37.983 14.756 1.958 1.00 0.00 C ATOM 148 O GLU 20 39.006 14.669 2.641 1.00 0.00 O ATOM 149 CB GLU 20 38.424 12.880 0.455 1.00 0.00 C ATOM 150 CG GLU 20 37.475 11.989 1.241 1.00 0.00 C ATOM 151 CD GLU 20 37.833 10.520 1.132 1.00 0.00 C ATOM 152 OE1 GLU 20 38.874 10.205 0.519 1.00 0.00 O ATOM 153 OE2 GLU 20 37.071 9.683 1.661 1.00 0.00 O ATOM 154 N PHE 21 36.851 15.189 2.529 1.00 0.00 N ATOM 155 CA PHE 21 36.805 15.487 3.960 1.00 0.00 C ATOM 156 C PHE 21 36.343 14.257 4.741 1.00 0.00 C ATOM 157 O PHE 21 35.250 13.729 4.531 1.00 0.00 O ATOM 158 CB PHE 21 35.831 16.634 4.237 1.00 0.00 C ATOM 159 CG PHE 21 36.302 17.966 3.725 1.00 0.00 C ATOM 160 CD1 PHE 21 35.914 18.420 2.478 1.00 0.00 C ATOM 161 CD2 PHE 21 37.132 18.764 4.493 1.00 0.00 C ATOM 162 CE1 PHE 21 36.347 19.644 2.006 1.00 0.00 C ATOM 163 CE2 PHE 21 37.565 19.989 4.022 1.00 0.00 C ATOM 164 CZ PHE 21 37.176 20.430 2.785 1.00 0.00 C ATOM 165 N GLU 22 37.213 13.814 5.655 1.00 0.00 N ATOM 166 CA GLU 22 36.864 12.802 6.644 1.00 0.00 C ATOM 167 C GLU 22 36.278 13.469 7.877 1.00 0.00 C ATOM 168 O GLU 22 36.942 14.255 8.558 1.00 0.00 O ATOM 169 CB GLU 22 38.103 12.005 7.057 1.00 0.00 C ATOM 170 CG GLU 22 37.828 10.917 8.083 1.00 0.00 C ATOM 171 CD GLU 22 39.081 10.160 8.479 1.00 0.00 C ATOM 172 OE1 GLU 22 40.165 10.490 7.953 1.00 0.00 O ATOM 173 OE2 GLU 22 38.979 9.238 9.315 1.00 0.00 O ATOM 174 N HIS 23 35.021 13.153 8.165 1.00 0.00 N ATOM 175 CA HIS 23 34.295 13.838 9.217 1.00 0.00 C ATOM 176 C HIS 23 33.251 12.937 9.861 1.00 0.00 C ATOM 177 O HIS 23 32.390 12.385 9.171 1.00 0.00 O ATOM 178 CB HIS 23 33.571 15.064 8.658 1.00 0.00 C ATOM 179 CG HIS 23 34.481 16.054 7.998 1.00 0.00 C ATOM 180 ND1 HIS 23 35.261 16.937 8.711 1.00 0.00 N ATOM 181 CD2 HIS 23 34.822 16.395 6.624 1.00 0.00 C ATOM 182 CE1 HIS 23 35.965 17.693 7.849 1.00 0.00 C ATOM 183 NE2 HIS 23 35.707 17.374 6.597 1.00 0.00 N ATOM 184 N GLY 24 33.307 12.772 11.186 1.00 0.00 N ATOM 185 CA GLY 24 32.345 11.941 11.902 1.00 0.00 C ATOM 186 C GLY 24 30.908 12.430 11.763 1.00 0.00 C ATOM 187 O GLY 24 29.998 11.701 11.375 1.00 0.00 O ATOM 188 N THR 25 30.725 13.707 12.097 1.00 0.00 N ATOM 189 CA THR 25 29.430 14.374 12.040 1.00 0.00 C ATOM 190 C THR 25 29.560 15.748 11.382 1.00 0.00 C ATOM 191 O THR 25 28.892 16.709 11.763 1.00 0.00 O ATOM 192 CB THR 25 28.838 14.579 13.446 1.00 0.00 C ATOM 193 OG1 THR 25 29.754 15.336 14.248 1.00 0.00 O ATOM 194 CG2 THR 25 28.586 13.238 14.119 1.00 0.00 C ATOM 195 N THR 26 30.442 15.830 10.373 1.00 0.00 N ATOM 196 CA THR 26 30.893 17.062 9.723 1.00 0.00 C ATOM 197 C THR 26 31.387 18.202 10.625 1.00 0.00 C ATOM 198 O THR 26 31.658 19.303 10.148 1.00 0.00 O ATOM 199 CB THR 26 29.769 17.705 8.890 1.00 0.00 C ATOM 200 OG1 THR 26 28.671 18.045 9.745 1.00 0.00 O ATOM 201 CG2 THR 26 29.280 16.741 7.821 1.00 0.00 C ATOM 202 N SER 27 31.518 17.979 11.936 1.00 0.00 N ATOM 203 CA SER 27 31.899 18.997 12.898 1.00 0.00 C ATOM 204 C SER 27 33.406 19.122 13.099 1.00 0.00 C ATOM 205 O SER 27 33.879 19.858 13.962 1.00 0.00 O ATOM 206 CB SER 27 31.297 18.689 14.271 1.00 0.00 C ATOM 207 OG SER 27 31.807 17.474 14.790 1.00 0.00 O ATOM 208 N GLY 28 34.174 18.387 12.287 1.00 0.00 N ATOM 209 CA GLY 28 35.625 18.414 12.327 1.00 0.00 C ATOM 210 C GLY 28 36.162 19.788 11.969 1.00 0.00 C ATOM 211 O GLY 28 35.888 20.345 10.903 1.00 0.00 O ATOM 212 N LYS 29 36.948 20.348 12.884 1.00 0.00 N ATOM 213 CA LYS 29 37.531 21.668 12.700 1.00 0.00 C ATOM 214 C LYS 29 38.818 21.634 11.878 1.00 0.00 C ATOM 215 O LYS 29 39.824 22.292 12.161 1.00 0.00 O ATOM 216 CB LYS 29 37.874 22.295 14.053 1.00 0.00 C ATOM 217 CG LYS 29 36.693 22.401 15.004 1.00 0.00 C ATOM 218 CD LYS 29 35.619 23.323 14.451 1.00 0.00 C ATOM 219 CE LYS 29 34.467 23.478 15.430 1.00 0.00 C ATOM 220 NZ LYS 29 33.382 24.337 14.880 1.00 0.00 N ATOM 221 N ARG 30 38.779 20.833 10.814 1.00 0.00 N ATOM 222 CA ARG 30 39.944 20.527 10.006 1.00 0.00 C ATOM 223 C ARG 30 39.551 20.735 8.550 1.00 0.00 C ATOM 224 O ARG 30 38.449 21.207 8.264 1.00 0.00 O ATOM 225 CB ARG 30 40.385 19.079 10.229 1.00 0.00 C ATOM 226 CG ARG 30 40.795 18.767 11.659 1.00 0.00 C ATOM 227 CD ARG 30 41.335 17.352 11.783 1.00 0.00 C ATOM 228 NE ARG 30 42.600 17.186 11.072 1.00 0.00 N ATOM 229 CZ ARG 30 43.791 17.473 11.589 1.00 0.00 C ATOM 230 NH1 ARG 30 44.888 17.289 10.868 1.00 0.00 H ATOM 231 NH2 ARG 30 43.881 17.944 12.825 1.00 0.00 H ATOM 232 N VAL 31 40.440 20.388 7.617 1.00 0.00 N ATOM 233 CA VAL 31 40.102 20.431 6.205 1.00 0.00 C ATOM 234 C VAL 31 40.058 19.004 5.650 1.00 0.00 C ATOM 235 O VAL 31 39.585 18.085 6.332 1.00 0.00 O ATOM 236 CB VAL 31 41.141 21.236 5.400 1.00 0.00 C ATOM 237 CG1 VAL 31 40.809 21.201 3.917 1.00 0.00 C ATOM 238 CG2 VAL 31 41.157 22.688 5.855 1.00 0.00 C ATOM 239 N VAL 32 40.533 18.764 4.427 1.00 0.00 N ATOM 240 CA VAL 32 40.202 17.588 3.645 1.00 0.00 C ATOM 241 C VAL 32 41.399 16.639 3.579 1.00 0.00 C ATOM 242 O VAL 32 42.305 16.712 4.404 1.00 0.00 O ATOM 243 CB VAL 32 39.811 17.960 2.203 1.00 0.00 C ATOM 244 CG1 VAL 32 38.551 18.813 2.197 1.00 0.00 C ATOM 245 CG2 VAL 32 40.927 18.748 1.535 1.00 0.00 C ATOM 246 N TYR 33 41.445 15.730 2.608 1.00 0.00 N ATOM 247 CA TYR 33 42.644 14.986 2.277 1.00 0.00 C ATOM 248 C TYR 33 42.877 15.252 0.799 1.00 0.00 C ATOM 249 O TYR 33 42.035 14.941 -0.040 1.00 0.00 O ATOM 250 CB TYR 33 42.440 13.493 2.545 1.00 0.00 C ATOM 251 CG TYR 33 42.207 13.159 4.000 1.00 0.00 C ATOM 252 CD1 TYR 33 40.924 13.137 4.529 1.00 0.00 C ATOM 253 CD2 TYR 33 43.274 12.864 4.841 1.00 0.00 C ATOM 254 CE1 TYR 33 40.702 12.832 5.858 1.00 0.00 C ATOM 255 CE2 TYR 33 43.071 12.556 6.173 1.00 0.00 C ATOM 256 CZ TYR 33 41.771 12.543 6.678 1.00 0.00 C ATOM 257 OH TYR 33 41.554 12.238 8.002 1.00 0.00 H ATOM 258 N VAL 34 44.043 15.837 0.515 1.00 0.00 N ATOM 259 CA VAL 34 44.426 16.256 -0.829 1.00 0.00 C ATOM 260 C VAL 34 45.705 15.533 -1.228 1.00 0.00 C ATOM 261 O VAL 34 46.618 15.443 -0.402 1.00 0.00 O ATOM 262 CB VAL 34 44.675 17.774 -0.897 1.00 0.00 C ATOM 263 CG1 VAL 34 43.403 18.538 -0.563 1.00 0.00 C ATOM 264 CG2 VAL 34 45.755 18.182 0.093 1.00 0.00 C ATOM 265 N ASP 35 45.835 15.008 -2.454 1.00 0.00 N ATOM 266 CA ASP 35 47.074 14.424 -2.990 1.00 0.00 C ATOM 267 C ASP 35 47.772 13.330 -2.168 1.00 0.00 C ATOM 268 O ASP 35 48.944 13.035 -2.368 1.00 0.00 O ATOM 269 CB ASP 35 48.143 15.505 -3.169 1.00 0.00 C ATOM 270 CG ASP 35 49.239 15.087 -4.129 1.00 0.00 C ATOM 271 OD1 ASP 35 49.063 14.063 -4.823 1.00 0.00 O ATOM 272 OD2 ASP 35 50.274 15.783 -4.188 1.00 0.00 O ATOM 273 N GLY 36 47.063 12.702 -1.222 1.00 0.00 N ATOM 274 CA GLY 36 47.672 11.785 -0.266 1.00 0.00 C ATOM 275 C GLY 36 48.486 12.519 0.797 1.00 0.00 C ATOM 276 O GLY 36 49.483 12.009 1.308 1.00 0.00 O ATOM 277 N LYS 37 48.054 13.734 1.136 1.00 0.00 N ATOM 278 CA LYS 37 48.759 14.616 2.047 1.00 0.00 C ATOM 279 C LYS 37 47.756 15.333 2.942 1.00 0.00 C ATOM 280 O LYS 37 46.759 15.922 2.527 1.00 0.00 O ATOM 281 CB LYS 37 49.563 15.659 1.268 1.00 0.00 C ATOM 282 CG LYS 37 50.437 16.545 2.140 1.00 0.00 C ATOM 283 CD LYS 37 51.272 17.497 1.298 1.00 0.00 C ATOM 284 CE LYS 37 52.074 18.448 2.170 1.00 0.00 C ATOM 285 NZ LYS 37 52.934 19.355 1.360 1.00 0.00 N ATOM 286 N GLU 39 48.076 15.253 4.229 1.00 0.00 N ATOM 287 CA GLU 39 47.307 15.889 5.279 1.00 0.00 C ATOM 288 C GLU 39 47.606 17.387 5.432 1.00 0.00 C ATOM 289 O GLU 39 48.570 17.809 6.083 1.00 0.00 O ATOM 290 CB GLU 39 47.603 15.237 6.631 1.00 0.00 C ATOM 291 CG GLU 39 46.745 15.756 7.773 1.00 0.00 C ATOM 292 CD GLU 39 47.155 15.186 9.116 1.00 0.00 C ATOM 293 OE1 GLU 39 48.054 14.320 9.144 1.00 0.00 O ATOM 294 OE2 GLU 39 46.576 15.605 10.141 1.00 0.00 O ATOM 295 N ILE 40 46.716 18.155 4.792 1.00 0.00 N ATOM 296 CA ILE 40 46.215 19.476 5.205 1.00 0.00 C ATOM 297 C ILE 40 46.786 20.430 6.260 1.00 0.00 C ATOM 298 O ILE 40 47.572 20.084 7.138 1.00 0.00 O ATOM 299 CB ILE 40 44.781 19.387 5.761 1.00 0.00 C ATOM 300 CG1 ILE 40 44.741 18.471 6.985 1.00 0.00 C ATOM 301 CG2 ILE 40 43.835 18.830 4.709 1.00 0.00 C ATOM 302 CD1 ILE 40 43.419 18.493 7.721 1.00 0.00 C ATOM 303 N ARG 41 46.345 21.691 6.129 1.00 0.00 N ATOM 304 CA ARG 41 46.595 22.728 7.122 1.00 0.00 C ATOM 305 C ARG 41 45.364 23.636 7.212 1.00 0.00 C ATOM 306 O ARG 41 44.914 24.192 6.212 1.00 0.00 O ATOM 307 CB ARG 41 47.812 23.566 6.728 1.00 0.00 C ATOM 308 CG ARG 41 48.164 24.658 7.725 1.00 0.00 C ATOM 309 CD ARG 41 49.421 25.404 7.308 1.00 0.00 C ATOM 310 NE ARG 41 49.763 26.469 8.247 1.00 0.00 N ATOM 311 CZ ARG 41 49.317 27.718 8.155 1.00 0.00 C ATOM 312 NH1 ARG 41 49.682 28.620 9.055 1.00 0.00 H ATOM 313 NH2 ARG 41 48.508 28.061 7.162 1.00 0.00 H ATOM 314 N LYS 42 44.815 23.787 8.424 1.00 0.00 N ATOM 315 CA LYS 42 43.548 24.479 8.657 1.00 0.00 C ATOM 316 C LYS 42 43.599 25.825 9.377 1.00 0.00 C ATOM 317 O LYS 42 44.646 26.252 9.867 1.00 0.00 O ATOM 318 CB LYS 42 42.616 23.618 9.512 1.00 0.00 C ATOM 319 CG LYS 42 43.121 23.373 10.926 1.00 0.00 C ATOM 320 CD LYS 42 42.172 22.477 11.703 1.00 0.00 C ATOM 321 CE LYS 42 42.696 22.199 13.103 1.00 0.00 C ATOM 322 NZ LYS 42 41.782 21.311 13.873 1.00 0.00 N ATOM 323 N GLU 43 42.439 26.498 9.436 1.00 0.00 N ATOM 324 CA GLU 43 42.245 27.675 10.277 1.00 0.00 C ATOM 325 C GLU 43 41.419 27.389 11.537 1.00 0.00 C ATOM 326 O GLU 43 41.200 28.282 12.353 1.00 0.00 O ATOM 327 CB GLU 43 41.513 28.773 9.502 1.00 0.00 C ATOM 328 CG GLU 43 42.297 29.328 8.324 1.00 0.00 C ATOM 329 CD GLU 43 41.541 30.412 7.581 1.00 0.00 C ATOM 330 OE1 GLU 43 40.409 30.738 7.995 1.00 0.00 O ATOM 331 OE2 GLU 43 42.081 30.936 6.583 1.00 0.00 O ATOM 332 N TRP 44 40.949 26.141 11.711 1.00 0.00 N ATOM 333 CA TRP 44 40.142 25.682 12.844 1.00 0.00 C ATOM 334 C TRP 44 38.713 26.228 12.836 1.00 0.00 C ATOM 335 O TRP 44 37.779 25.451 12.623 1.00 0.00 O ATOM 336 CB TRP 44 40.776 26.119 14.166 1.00 0.00 C ATOM 337 CG TRP 44 40.040 25.631 15.376 1.00 0.00 C ATOM 338 CD1 TRP 44 39.225 26.365 16.190 1.00 0.00 C ATOM 339 CD2 TRP 44 40.049 24.301 15.909 1.00 0.00 C ATOM 340 NE1 TRP 44 38.726 25.574 17.197 1.00 0.00 N ATOM 341 CE2 TRP 44 39.217 24.302 17.045 1.00 0.00 C ATOM 342 CE3 TRP 44 40.677 23.109 15.534 1.00 0.00 C ATOM 343 CZ2 TRP 44 38.999 23.158 17.813 1.00 0.00 C ATOM 344 CZ3 TRP 44 40.458 21.978 16.298 1.00 0.00 C ATOM 345 CH2 TRP 44 39.628 22.007 17.424 1.00 0.00 H ATOM 346 N MET 45 38.521 27.535 13.062 1.00 0.00 N ATOM 347 CA MET 45 37.239 28.246 13.004 1.00 0.00 C ATOM 348 C MET 45 35.912 27.673 13.528 1.00 0.00 C ATOM 349 O MET 45 35.252 26.841 12.919 1.00 0.00 O ATOM 350 CB MET 45 36.868 28.565 11.554 1.00 0.00 C ATOM 351 CG MET 45 37.801 29.558 10.879 1.00 0.00 C ATOM 352 SD MET 45 37.807 31.168 11.689 1.00 0.00 S ATOM 353 CE MET 45 36.174 31.770 11.262 1.00 0.00 C ATOM 354 N PHE 46 35.477 28.119 14.710 1.00 0.00 N ATOM 355 CA PHE 46 34.081 27.936 15.081 1.00 0.00 C ATOM 356 C PHE 46 33.364 29.263 14.896 1.00 0.00 C ATOM 357 O PHE 46 33.558 30.212 15.666 1.00 0.00 O ATOM 358 CB PHE 46 33.969 27.491 16.541 1.00 0.00 C ATOM 359 CG PHE 46 32.564 27.185 16.976 1.00 0.00 C ATOM 360 CD1 PHE 46 31.976 25.972 16.663 1.00 0.00 C ATOM 361 CD2 PHE 46 31.831 28.111 17.697 1.00 0.00 C ATOM 362 CE1 PHE 46 30.684 25.691 17.064 1.00 0.00 C ATOM 363 CE2 PHE 46 30.538 27.830 18.098 1.00 0.00 C ATOM 364 CZ PHE 46 29.965 26.626 17.784 1.00 0.00 C ATOM 365 N LYS 47 32.525 29.331 13.862 1.00 0.00 N ATOM 366 CA LYS 47 31.624 30.461 13.684 1.00 0.00 C ATOM 367 C LYS 47 30.272 30.096 14.289 1.00 0.00 C ATOM 368 O LYS 47 30.083 28.971 14.756 1.00 0.00 O ATOM 369 CB LYS 47 31.450 30.780 12.199 1.00 0.00 C ATOM 370 CG LYS 47 32.735 31.196 11.498 1.00 0.00 C ATOM 371 CD LYS 47 32.468 31.624 10.064 1.00 0.00 C ATOM 372 CE LYS 47 33.751 32.051 9.369 1.00 0.00 C ATOM 373 NZ LYS 47 33.502 32.486 7.966 1.00 0.00 N ATOM 374 N LEU 48 29.308 31.022 14.299 1.00 0.00 N ATOM 375 CA LEU 48 27.972 30.735 14.813 1.00 0.00 C ATOM 376 C LEU 48 27.262 29.737 13.897 1.00 0.00 C ATOM 377 O LEU 48 26.692 28.745 14.358 1.00 0.00 O ATOM 378 CB LEU 48 27.139 32.015 14.883 1.00 0.00 C ATOM 379 CG LEU 48 27.558 33.040 15.939 1.00 0.00 C ATOM 380 CD1 LEU 48 26.773 34.333 15.775 1.00 0.00 C ATOM 381 CD2 LEU 48 27.303 32.504 17.340 1.00 0.00 C ATOM 382 N VAL 49 27.289 29.989 12.583 1.00 0.00 N ATOM 383 CA VAL 49 26.722 29.078 11.599 1.00 0.00 C ATOM 384 C VAL 49 27.797 28.860 10.530 1.00 0.00 C ATOM 385 O VAL 49 27.880 29.600 9.550 1.00 0.00 O ATOM 386 CB VAL 49 25.452 29.664 10.954 1.00 0.00 C ATOM 387 CG1 VAL 49 24.834 28.664 9.989 1.00 0.00 C ATOM 388 CG2 VAL 49 24.422 30.004 12.019 1.00 0.00 C ATOM 389 N GLY 50 28.641 27.835 10.703 1.00 0.00 N ATOM 390 CA GLY 50 29.599 27.444 9.676 1.00 0.00 C ATOM 391 C GLY 50 31.058 27.532 10.118 1.00 0.00 C ATOM 392 O GLY 50 31.366 27.629 11.308 1.00 0.00 O ATOM 393 N LYS 51 31.963 27.495 9.132 1.00 0.00 N ATOM 394 CA LYS 51 33.410 27.545 9.333 1.00 0.00 C ATOM 395 C LYS 51 34.063 28.055 8.047 1.00 0.00 C ATOM 396 O LYS 51 33.554 27.822 6.947 1.00 0.00 O ATOM 397 CB LYS 51 33.954 26.154 9.663 1.00 0.00 C ATOM 398 CG LYS 51 33.836 25.156 8.523 1.00 0.00 C ATOM 399 CD LYS 51 34.428 23.808 8.906 1.00 0.00 C ATOM 400 CE LYS 51 33.529 23.069 9.884 1.00 0.00 C ATOM 401 NZ LYS 51 34.055 21.713 10.205 1.00 0.00 N ATOM 402 N GLU 52 35.194 28.756 8.178 1.00 0.00 N ATOM 403 CA GLU 52 36.030 29.145 7.050 1.00 0.00 C ATOM 404 C GLU 52 37.433 28.559 7.162 1.00 0.00 C ATOM 405 O GLU 52 38.095 28.654 8.198 1.00 0.00 O ATOM 406 CB GLU 52 36.162 30.667 6.980 1.00 0.00 C ATOM 407 CG GLU 52 37.017 31.163 5.826 1.00 0.00 C ATOM 408 CD GLU 52 37.096 32.677 5.767 1.00 0.00 C ATOM 409 OE1 GLU 52 36.531 33.336 6.665 1.00 0.00 O ATOM 410 OE2 GLU 52 37.721 33.203 4.823 1.00 0.00 O ATOM 411 N THR 53 37.898 27.942 6.081 1.00 0.00 N ATOM 412 CA THR 53 39.263 27.437 5.952 1.00 0.00 C ATOM 413 C THR 53 39.872 28.088 4.688 1.00 0.00 C ATOM 414 O THR 53 39.342 29.149 4.354 1.00 0.00 O ATOM 415 CB THR 53 39.286 25.904 5.807 1.00 0.00 C ATOM 416 OG1 THR 53 38.601 25.523 4.608 1.00 0.00 O ATOM 417 CG2 THR 53 38.600 25.247 6.996 1.00 0.00 C ATOM 418 N PHE 54 40.864 27.797 3.821 1.00 0.00 N ATOM 419 CA PHE 54 42.028 26.910 3.927 1.00 0.00 C ATOM 420 C PHE 54 42.996 27.252 2.788 1.00 0.00 C ATOM 421 O PHE 54 42.670 28.033 1.895 1.00 0.00 O ATOM 422 CB PHE 54 41.599 25.446 3.813 1.00 0.00 C ATOM 423 CG PHE 54 40.898 25.118 2.526 1.00 0.00 C ATOM 424 CD1 PHE 54 41.616 24.718 1.412 1.00 0.00 C ATOM 425 CD2 PHE 54 39.520 25.209 2.427 1.00 0.00 C ATOM 426 CE1 PHE 54 40.972 24.416 0.228 1.00 0.00 C ATOM 427 CE2 PHE 54 38.876 24.908 1.243 1.00 0.00 C ATOM 428 CZ PHE 54 39.595 24.512 0.146 1.00 0.00 C ATOM 429 N TYR 55 44.207 26.685 2.782 1.00 0.00 N ATOM 430 CA TYR 55 45.184 26.973 1.739 1.00 0.00 C ATOM 431 C TYR 55 45.535 25.704 0.968 1.00 0.00 C ATOM 432 O TYR 55 45.818 24.670 1.581 1.00 0.00 O ATOM 433 CB TYR 55 46.469 27.537 2.350 1.00 0.00 C ATOM 434 CG TYR 55 46.294 28.887 3.009 1.00 0.00 C ATOM 435 CD1 TYR 55 45.977 28.984 4.357 1.00 0.00 C ATOM 436 CD2 TYR 55 46.444 30.059 2.279 1.00 0.00 C ATOM 437 CE1 TYR 55 45.815 30.213 4.968 1.00 0.00 C ATOM 438 CE2 TYR 55 46.285 31.297 2.872 1.00 0.00 C ATOM 439 CZ TYR 55 45.968 31.366 4.228 1.00 0.00 C ATOM 440 OH TYR 55 45.807 32.591 4.834 1.00 0.00 H ATOM 441 N VAL 56 45.527 25.739 -0.372 1.00 0.00 N ATOM 442 CA VAL 56 45.851 24.569 -1.188 1.00 0.00 C ATOM 443 C VAL 56 47.099 24.880 -2.010 1.00 0.00 C ATOM 444 O VAL 56 47.011 25.331 -3.155 1.00 0.00 O ATOM 445 CB VAL 56 44.699 24.212 -2.146 1.00 0.00 C ATOM 446 CG1 VAL 56 45.042 22.968 -2.951 1.00 0.00 C ATOM 447 CG2 VAL 56 43.422 23.942 -1.366 1.00 0.00 C ATOM 448 N GLY 57 48.283 24.643 -1.437 1.00 0.00 N ATOM 449 CA GLY 57 49.560 24.760 -2.139 1.00 0.00 C ATOM 450 C GLY 57 49.847 26.127 -2.755 1.00 0.00 C ATOM 451 O GLY 57 50.504 26.986 -2.154 1.00 0.00 O ATOM 452 N LYS 60 49.339 26.320 -3.974 1.00 0.00 N ATOM 453 CA LYS 60 49.577 27.524 -4.757 1.00 0.00 C ATOM 454 C LYS 60 48.421 28.524 -4.634 1.00 0.00 C ATOM 455 O LYS 60 48.543 29.676 -5.048 1.00 0.00 O ATOM 456 CB LYS 60 49.736 27.177 -6.238 1.00 0.00 C ATOM 457 CG LYS 60 50.957 26.327 -6.550 1.00 0.00 C ATOM 458 CD LYS 60 51.042 26.004 -8.032 1.00 0.00 C ATOM 459 CE LYS 60 52.268 25.160 -8.345 1.00 0.00 C ATOM 460 NZ LYS 60 52.407 24.902 -9.804 1.00 0.00 N ATOM 461 N THR 61 47.273 28.130 -4.067 1.00 0.00 N ATOM 462 CA THR 61 46.099 28.991 -4.035 1.00 0.00 C ATOM 463 C THR 61 45.385 28.953 -2.681 1.00 0.00 C ATOM 464 O THR 61 45.756 28.202 -1.776 1.00 0.00 O ATOM 465 CB THR 61 45.065 28.576 -5.098 1.00 0.00 C ATOM 466 OG1 THR 61 44.542 27.280 -4.779 1.00 0.00 O ATOM 467 CG2 THR 61 45.709 28.521 -6.475 1.00 0.00 C ATOM 468 N LYS 62 44.343 29.777 -2.544 1.00 0.00 N ATOM 469 CA LYS 62 43.551 29.865 -1.329 1.00 0.00 C ATOM 470 C LYS 62 42.127 29.444 -1.673 1.00 0.00 C ATOM 471 O LYS 62 41.582 29.803 -2.723 1.00 0.00 O ATOM 472 CB LYS 62 43.555 31.298 -0.791 1.00 0.00 C ATOM 473 CG LYS 62 44.913 31.775 -0.305 1.00 0.00 C ATOM 474 CD LYS 62 44.835 33.186 0.253 1.00 0.00 C ATOM 475 CE LYS 62 46.194 33.663 0.740 1.00 0.00 C ATOM 476 NZ LYS 62 46.131 35.042 1.298 1.00 0.00 N ATOM 477 N ALA 63 41.517 28.672 -0.775 1.00 0.00 N ATOM 478 CA ALA 63 40.190 28.114 -0.986 1.00 0.00 C ATOM 479 C ALA 63 39.407 28.140 0.329 1.00 0.00 C ATOM 480 O ALA 63 39.923 28.654 1.328 1.00 0.00 O ATOM 481 CB ALA 63 40.291 26.676 -1.471 1.00 0.00 C ATOM 482 N THR 64 38.180 27.616 0.396 1.00 0.00 N ATOM 483 CA THR 64 37.453 27.484 1.652 1.00 0.00 C ATOM 484 C THR 64 36.466 26.323 1.550 1.00 0.00 C ATOM 485 O THR 64 35.929 26.042 0.480 1.00 0.00 O ATOM 486 CB THR 64 36.666 28.764 1.987 1.00 0.00 C ATOM 487 OG1 THR 64 36.068 28.637 3.282 1.00 0.00 O ATOM 488 CG2 THR 64 35.568 28.998 0.960 1.00 0.00 C ATOM 489 N ILE 65 36.214 25.632 2.663 1.00 0.00 N ATOM 490 CA ILE 65 35.189 24.609 2.668 1.00 0.00 C ATOM 491 C ILE 65 33.976 25.169 3.402 1.00 0.00 C ATOM 492 O ILE 65 33.896 25.211 4.632 1.00 0.00 O ATOM 493 CB ILE 65 35.670 23.332 3.380 1.00 0.00 C ATOM 494 CG1 ILE 65 36.983 22.841 2.766 1.00 0.00 C ATOM 495 CG2 ILE 65 34.633 22.226 3.249 1.00 0.00 C ATOM 496 CD1 ILE 65 36.885 22.523 1.290 1.00 0.00 C ATOM 497 N ASN 66 32.990 25.620 2.626 1.00 0.00 N ATOM 498 CA ASN 66 31.781 26.170 3.210 1.00 0.00 C ATOM 499 C ASN 66 30.889 25.035 3.697 1.00 0.00 C ATOM 500 O ASN 66 30.008 24.517 3.007 1.00 0.00 O ATOM 501 CB ASN 66 31.014 26.994 2.175 1.00 0.00 C ATOM 502 CG ASN 66 29.850 27.754 2.782 1.00 0.00 C ATOM 503 OD1 ASN 66 29.356 27.399 3.852 1.00 0.00 O ATOM 504 ND2 ASN 66 29.407 28.803 2.098 1.00 0.00 N ATOM 505 N ILE 67 31.166 24.668 4.947 1.00 0.00 N ATOM 506 CA ILE 67 30.208 23.946 5.772 1.00 0.00 C ATOM 507 C ILE 67 29.108 24.919 6.203 1.00 0.00 C ATOM 508 O ILE 67 29.367 26.078 6.512 1.00 0.00 O ATOM 509 CB ILE 67 30.875 23.357 7.029 1.00 0.00 C ATOM 510 CG1 ILE 67 31.906 22.297 6.637 1.00 0.00 C ATOM 511 CG2 ILE 67 29.836 22.709 7.930 1.00 0.00 C ATOM 512 CD1 ILE 67 32.789 21.851 7.783 1.00 0.00 C ATOM 513 N ASP 68 27.867 24.435 6.221 1.00 0.00 N ATOM 514 CA ASP 68 26.734 25.189 6.734 1.00 0.00 C ATOM 515 C ASP 68 26.052 24.372 7.827 1.00 0.00 C ATOM 516 O ASP 68 26.056 23.137 7.773 1.00 0.00 O ATOM 517 CB ASP 68 25.729 25.475 5.617 1.00 0.00 C ATOM 518 CG ASP 68 26.300 26.371 4.535 1.00 0.00 C ATOM 519 OD1 ASP 68 26.865 27.430 4.878 1.00 0.00 O ATOM 520 OD2 ASP 68 26.183 26.013 3.345 1.00 0.00 O ATOM 521 N ALA 69 25.463 25.048 8.820 1.00 0.00 N ATOM 522 CA ALA 69 25.046 24.395 10.052 1.00 0.00 C ATOM 523 C ALA 69 23.573 24.525 10.415 1.00 0.00 C ATOM 524 O ALA 69 22.940 25.553 10.153 1.00 0.00 O ATOM 525 CB ALA 69 25.809 24.967 11.238 1.00 0.00 C ATOM 526 N ILE 70 23.023 23.468 11.028 1.00 0.00 N ATOM 527 CA ILE 70 21.681 23.488 11.596 1.00 0.00 C ATOM 528 C ILE 70 21.619 22.618 12.855 1.00 0.00 C ATOM 529 O ILE 70 21.727 21.393 12.818 1.00 0.00 O ATOM 530 CB ILE 70 20.638 22.952 10.598 1.00 0.00 C ATOM 531 CG1 ILE 70 20.656 23.781 9.312 1.00 0.00 C ATOM 532 CG2 ILE 70 19.242 23.023 11.198 1.00 0.00 C ATOM 533 CD1 ILE 70 19.741 23.249 8.230 1.00 0.00 C ATOM 534 N SER 71 21.436 23.312 13.992 1.00 0.00 N ATOM 535 CA SER 71 21.298 22.713 15.317 1.00 0.00 C ATOM 536 C SER 71 22.452 21.765 15.661 1.00 0.00 C ATOM 537 O SER 71 23.606 22.207 15.667 1.00 0.00 O ATOM 538 CB SER 71 20.003 21.903 15.406 1.00 0.00 C ATOM 539 OG SER 71 19.694 21.582 16.752 1.00 0.00 O ATOM 540 N GLY 72 22.204 20.485 15.949 1.00 0.00 N ATOM 541 CA GLY 72 23.252 19.483 15.996 1.00 0.00 C ATOM 542 C GLY 72 22.865 18.277 15.156 1.00 0.00 C ATOM 543 O GLY 72 23.160 17.142 15.530 1.00 0.00 O ATOM 544 N PHE 73 22.201 18.509 14.018 1.00 0.00 N ATOM 545 CA PHE 73 21.582 17.420 13.280 1.00 0.00 C ATOM 546 C PHE 73 22.351 16.951 12.042 1.00 0.00 C ATOM 547 O PHE 73 23.046 15.938 12.103 1.00 0.00 O ATOM 548 CB PHE 73 20.194 17.830 12.782 1.00 0.00 C ATOM 549 CG PHE 73 19.459 16.733 12.067 1.00 0.00 C ATOM 550 CD1 PHE 73 18.836 15.721 12.775 1.00 0.00 C ATOM 551 CD2 PHE 73 19.390 16.714 10.685 1.00 0.00 C ATOM 552 CE1 PHE 73 18.158 14.711 12.118 1.00 0.00 C ATOM 553 CE2 PHE 73 18.712 15.705 10.026 1.00 0.00 C ATOM 554 CZ PHE 73 18.099 14.706 10.737 1.00 0.00 C ATOM 555 N ALA 74 22.259 17.649 10.907 1.00 0.00 N ATOM 556 CA ALA 74 22.816 17.173 9.650 1.00 0.00 C ATOM 557 C ALA 74 23.348 18.383 8.906 1.00 0.00 C ATOM 558 O ALA 74 22.676 19.413 8.844 1.00 0.00 O ATOM 559 CB ALA 74 21.744 16.480 8.823 1.00 0.00 C ATOM 560 N TYR 75 24.547 18.289 8.336 1.00 0.00 N ATOM 561 CA TYR 75 25.234 19.479 7.860 1.00 0.00 C ATOM 562 C TYR 75 25.642 19.357 6.403 1.00 0.00 C ATOM 563 O TYR 75 25.602 18.285 5.801 1.00 0.00 O ATOM 564 CB TYR 75 26.503 19.728 8.677 1.00 0.00 C ATOM 565 CG TYR 75 26.245 19.994 10.143 1.00 0.00 C ATOM 566 CD1 TYR 75 26.213 18.952 11.061 1.00 0.00 C ATOM 567 CD2 TYR 75 26.035 21.287 10.605 1.00 0.00 C ATOM 568 CE1 TYR 75 25.978 19.186 12.402 1.00 0.00 C ATOM 569 CE2 TYR 75 25.799 21.540 11.943 1.00 0.00 C ATOM 570 CZ TYR 75 25.772 20.475 12.842 1.00 0.00 C ATOM 571 OH TYR 75 25.538 20.710 14.178 1.00 0.00 H ATOM 572 N GLU 76 26.043 20.497 5.841 1.00 0.00 N ATOM 573 CA GLU 76 26.207 20.610 4.407 1.00 0.00 C ATOM 574 C GLU 76 27.577 21.179 4.069 1.00 0.00 C ATOM 575 O GLU 76 27.853 22.367 4.257 1.00 0.00 O ATOM 576 CB GLU 76 25.141 21.535 3.817 1.00 0.00 C ATOM 577 CG GLU 76 25.215 21.683 2.307 1.00 0.00 C ATOM 578 CD GLU 76 24.173 22.643 1.764 1.00 0.00 C ATOM 579 OE1 GLU 76 23.430 23.233 2.575 1.00 0.00 O ATOM 580 OE2 GLU 76 24.100 22.802 0.527 1.00 0.00 O ATOM 581 N TYR 77 28.420 20.284 3.562 1.00 0.00 N ATOM 582 CA TYR 77 29.714 20.605 2.977 1.00 0.00 C ATOM 583 C TYR 77 29.644 21.229 1.577 1.00 0.00 C ATOM 584 O TYR 77 28.866 20.776 0.743 1.00 0.00 O ATOM 585 CB TYR 77 30.568 19.342 2.841 1.00 0.00 C ATOM 586 CG TYR 77 31.094 18.814 4.157 1.00 0.00 C ATOM 587 CD1 TYR 77 30.436 17.791 4.827 1.00 0.00 C ATOM 588 CD2 TYR 77 32.247 19.341 4.724 1.00 0.00 C ATOM 589 CE1 TYR 77 30.909 17.303 6.030 1.00 0.00 C ATOM 590 CE2 TYR 77 32.735 18.865 5.927 1.00 0.00 C ATOM 591 CZ TYR 77 32.055 17.837 6.579 1.00 0.00 C ATOM 592 OH TYR 77 32.529 17.352 7.776 1.00 0.00 H ATOM 593 N THR 78 30.429 22.264 1.263 1.00 0.00 N ATOM 594 CA THR 78 30.691 22.679 -0.116 1.00 0.00 C ATOM 595 C THR 78 32.137 23.138 -0.256 1.00 0.00 C ATOM 596 O THR 78 32.590 24.028 0.466 1.00 0.00 O ATOM 597 CB THR 78 29.774 23.841 -0.539 1.00 0.00 C ATOM 598 OG1 THR 78 28.403 23.448 -0.400 1.00 0.00 O ATOM 599 CG2 THR 78 30.032 24.222 -1.989 1.00 0.00 C ATOM 600 N LEU 79 32.886 22.539 -1.188 1.00 0.00 N ATOM 601 CA LEU 79 34.203 23.057 -1.530 1.00 0.00 C ATOM 602 C LEU 79 34.080 24.300 -2.400 1.00 0.00 C ATOM 603 O LEU 79 33.286 24.356 -3.341 1.00 0.00 O ATOM 604 CB LEU 79 35.009 22.007 -2.298 1.00 0.00 C ATOM 605 CG LEU 79 36.462 22.366 -2.615 1.00 0.00 C ATOM 606 CD1 LEU 79 37.277 22.488 -1.336 1.00 0.00 C ATOM 607 CD2 LEU 79 37.102 21.297 -3.486 1.00 0.00 C ATOM 608 N GLU 80 34.890 25.297 -2.059 1.00 0.00 N ATOM 609 CA GLU 80 35.021 26.504 -2.847 1.00 0.00 C ATOM 610 C GLU 80 36.509 26.723 -3.090 1.00 0.00 C ATOM 611 O GLU 80 37.320 26.651 -2.158 1.00 0.00 O ATOM 612 CB GLU 80 34.427 27.699 -2.098 1.00 0.00 C ATOM 613 CG GLU 80 34.496 29.009 -2.867 1.00 0.00 C ATOM 614 CD GLU 80 33.809 30.148 -2.140 1.00 0.00 C ATOM 615 OE1 GLU 80 33.325 29.925 -1.010 1.00 0.00 O ATOM 616 OE2 GLU 80 33.756 31.263 -2.699 1.00 0.00 O ATOM 617 N ILE 81 36.888 26.994 -4.336 1.00 0.00 N ATOM 618 CA ILE 81 38.264 27.300 -4.698 1.00 0.00 C ATOM 619 C ILE 81 38.222 28.551 -5.572 1.00 0.00 C ATOM 620 O ILE 81 37.357 28.649 -6.441 1.00 0.00 O ATOM 621 CB ILE 81 38.913 26.140 -5.476 1.00 0.00 C ATOM 622 CG1 ILE 81 38.947 24.874 -4.617 1.00 0.00 C ATOM 623 CG2 ILE 81 40.339 26.495 -5.868 1.00 0.00 C ATOM 624 CD1 ILE 81 39.358 23.632 -5.376 1.00 0.00 C ATOM 625 N ASN 82 39.130 29.523 -5.375 1.00 0.00 N ATOM 626 CA ASN 82 39.234 30.728 -6.206 1.00 0.00 C ATOM 627 C ASN 82 37.947 31.569 -6.286 1.00 0.00 C ATOM 628 O ASN 82 37.714 32.309 -7.241 1.00 0.00 O ATOM 629 CB ASN 82 39.592 30.357 -7.647 1.00 0.00 C ATOM 630 CG ASN 82 41.000 29.811 -7.776 1.00 0.00 C ATOM 631 OD1 ASN 82 41.875 30.127 -6.970 1.00 0.00 O ATOM 632 ND2 ASN 82 41.223 28.988 -8.795 1.00 0.00 N ATOM 633 N GLY 83 37.067 31.483 -5.281 1.00 0.00 N ATOM 634 CA GLY 83 35.782 32.174 -5.316 1.00 0.00 C ATOM 635 C GLY 83 34.749 31.489 -6.209 1.00 0.00 C ATOM 636 O GLY 83 33.787 32.115 -6.657 1.00 0.00 O ATOM 637 N LYS 84 34.933 30.196 -6.481 1.00 0.00 N ATOM 638 CA LYS 84 34.025 29.403 -7.291 1.00 0.00 C ATOM 639 C LYS 84 33.638 28.194 -6.451 1.00 0.00 C ATOM 640 O LYS 84 34.503 27.497 -5.922 1.00 0.00 O ATOM 641 CB LYS 84 34.711 28.958 -8.585 1.00 0.00 C ATOM 642 CG LYS 84 33.798 28.223 -9.551 1.00 0.00 C ATOM 643 CD LYS 84 34.522 27.875 -10.840 1.00 0.00 C ATOM 644 CE LYS 84 33.606 27.144 -11.809 1.00 0.00 C ATOM 645 NZ LYS 84 34.281 26.865 -13.107 1.00 0.00 N ATOM 646 N SER 85 32.337 27.924 -6.313 1.00 0.00 N ATOM 647 CA SER 85 31.868 26.715 -5.651 1.00 0.00 C ATOM 648 C SER 85 32.087 25.501 -6.546 1.00 0.00 C ATOM 649 O SER 85 32.229 25.665 -7.762 1.00 0.00 O ATOM 650 CB SER 85 30.375 26.821 -5.335 1.00 0.00 C ATOM 651 OG SER 85 29.601 26.823 -6.522 1.00 0.00 O ATOM 652 N LEU 86 32.124 24.282 -6.000 1.00 0.00 N ATOM 653 CA LEU 86 32.308 23.087 -6.820 1.00 0.00 C ATOM 654 C LEU 86 31.255 22.820 -7.898 1.00 0.00 C ATOM 655 O LEU 86 31.531 22.152 -8.896 1.00 0.00 O ATOM 656 CB LEU 86 32.309 21.832 -5.946 1.00 0.00 C ATOM 657 CG LEU 86 32.699 20.524 -6.637 1.00 0.00 C ATOM 658 CD1 LEU 86 34.108 20.615 -7.204 1.00 0.00 C ATOM 659 CD2 LEU 86 32.656 19.363 -5.656 1.00 0.00 C ATOM 660 N LYS 87 30.035 23.344 -7.699 1.00 0.00 N ATOM 661 CA LYS 87 28.884 23.146 -8.583 1.00 0.00 C ATOM 662 C LYS 87 28.317 21.723 -8.591 1.00 0.00 C ATOM 663 O LYS 87 27.402 21.433 -9.360 1.00 0.00 O ATOM 664 CB LYS 87 29.260 23.462 -10.031 1.00 0.00 C ATOM 665 CG LYS 87 29.600 24.923 -10.280 1.00 0.00 C ATOM 666 CD LYS 87 30.078 25.143 -11.706 1.00 0.00 C ATOM 667 CE LYS 87 30.430 26.602 -11.950 1.00 0.00 C ATOM 668 NZ LYS 87 30.946 26.825 -13.330 1.00 0.00 N ATOM 669 N LYS 88 28.831 20.808 -7.752 1.00 0.00 N ATOM 670 CA LYS 88 28.383 19.414 -7.673 1.00 0.00 C ATOM 671 C LYS 88 26.909 19.259 -7.297 1.00 0.00 C ATOM 672 O LYS 88 26.240 18.312 -7.707 1.00 0.00 O ATOM 673 CB LYS 88 29.188 18.651 -6.618 1.00 0.00 C ATOM 674 CG LYS 88 28.820 17.181 -6.501 1.00 0.00 C ATOM 675 CD LYS 88 29.714 16.467 -5.500 1.00 0.00 C ATOM 676 CE LYS 88 29.359 14.993 -5.396 1.00 0.00 C ATOM 677 NZ LYS 88 30.228 14.280 -4.419 1.00 0.00 N ATOM 678 N TYR 89 26.388 20.203 -6.505 1.00 0.00 N ATOM 679 CA TYR 89 24.970 20.255 -6.166 1.00 0.00 C ATOM 680 C TYR 89 24.096 20.595 -7.378 1.00 0.00 C ATOM 681 O TYR 89 22.926 20.220 -7.442 1.00 0.00 O ATOM 682 CB TYR 89 24.713 21.319 -5.098 1.00 0.00 C ATOM 683 CG TYR 89 25.184 20.928 -3.716 1.00 0.00 C ATOM 684 CD1 TYR 89 26.332 21.491 -3.170 1.00 0.00 C ATOM 685 CD2 TYR 89 24.482 19.998 -2.962 1.00 0.00 C ATOM 686 CE1 TYR 89 26.771 21.140 -1.907 1.00 0.00 C ATOM 687 CE2 TYR 89 24.906 19.634 -1.697 1.00 0.00 C ATOM 688 CZ TYR 89 26.061 20.214 -1.173 1.00 0.00 C ATOM 689 OH TYR 89 26.495 19.863 0.084 1.00 0.00 H ATOM 690 N MET 90 24.647 21.311 -8.361 1.00 0.00 N ATOM 691 CA MET 90 23.900 21.690 -9.553 1.00 0.00 C ATOM 692 C MET 90 23.733 20.554 -10.565 1.00 0.00 C ATOM 693 O MET 90 23.270 21.679 -10.760 1.00 0.00 O ATOM 694 CB MET 90 24.606 22.833 -10.287 1.00 0.00 C ATOM 695 CG MET 90 24.687 24.125 -9.492 1.00 0.00 C ATOM 696 SD MET 90 25.446 25.469 -10.424 1.00 0.00 S ATOM 697 CE MET 90 24.113 25.900 -11.541 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 697 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 65.42 54.2 168 94.4 178 ARMSMC SECONDARY STRUCTURE . . 49.14 65.8 114 96.6 118 ARMSMC SURFACE . . . . . . . . 72.51 45.9 98 90.7 108 ARMSMC BURIED . . . . . . . . 53.95 65.7 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.20 47.3 74 98.7 75 ARMSSC1 RELIABLE SIDE CHAINS . 81.98 47.7 65 98.5 66 ARMSSC1 SECONDARY STRUCTURE . . 80.19 51.0 51 98.1 52 ARMSSC1 SURFACE . . . . . . . . 86.33 41.9 43 97.7 44 ARMSSC1 BURIED . . . . . . . . 78.66 54.8 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.25 61.1 54 98.2 55 ARMSSC2 RELIABLE SIDE CHAINS . 62.99 64.4 45 97.8 46 ARMSSC2 SECONDARY STRUCTURE . . 65.06 65.8 38 97.4 39 ARMSSC2 SURFACE . . . . . . . . 64.86 59.4 32 97.0 33 ARMSSC2 BURIED . . . . . . . . 72.89 63.6 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.74 52.2 23 95.8 24 ARMSSC3 RELIABLE SIDE CHAINS . 71.74 52.2 23 95.8 24 ARMSSC3 SECONDARY STRUCTURE . . 62.92 56.2 16 94.1 17 ARMSSC3 SURFACE . . . . . . . . 63.99 64.7 17 94.4 18 ARMSSC3 BURIED . . . . . . . . 90.16 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.46 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 74.46 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 84.83 40.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 75.74 54.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 67.01 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.49 (Number of atoms: 87) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.49 87 96.7 90 CRMSCA CRN = ALL/NP . . . . . 0.0517 CRMSCA SECONDARY STRUCTURE . . 2.81 58 98.3 59 CRMSCA SURFACE . . . . . . . . 5.28 52 94.5 55 CRMSCA BURIED . . . . . . . . 2.95 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.60 427 96.6 442 CRMSMC SECONDARY STRUCTURE . . 3.02 288 98.3 293 CRMSMC SURFACE . . . . . . . . 5.39 254 94.4 269 CRMSMC BURIED . . . . . . . . 3.10 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.26 349 98.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.36 309 97.8 316 CRMSSC SECONDARY STRUCTURE . . 4.84 247 98.0 252 CRMSSC SURFACE . . . . . . . . 7.26 197 96.6 204 CRMSSC BURIED . . . . . . . . 4.68 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.45 697 97.3 716 CRMSALL SECONDARY STRUCTURE . . 4.03 479 98.2 488 CRMSALL SURFACE . . . . . . . . 6.31 405 95.5 424 CRMSALL BURIED . . . . . . . . 3.96 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.559 1.000 0.500 87 96.7 90 ERRCA SECONDARY STRUCTURE . . 2.402 1.000 0.500 58 98.3 59 ERRCA SURFACE . . . . . . . . 4.279 1.000 0.500 52 94.5 55 ERRCA BURIED . . . . . . . . 2.489 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.635 1.000 0.500 427 96.6 442 ERRMC SECONDARY STRUCTURE . . 2.515 1.000 0.500 288 98.3 293 ERRMC SURFACE . . . . . . . . 4.359 1.000 0.500 254 94.4 269 ERRMC BURIED . . . . . . . . 2.572 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.878 1.000 0.500 349 98.0 356 ERRSC RELIABLE SIDE CHAINS . 4.927 1.000 0.500 309 97.8 316 ERRSC SECONDARY STRUCTURE . . 3.740 1.000 0.500 247 98.0 252 ERRSC SURFACE . . . . . . . . 5.868 1.000 0.500 197 96.6 204 ERRSC BURIED . . . . . . . . 3.594 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.223 1.000 0.500 697 97.3 716 ERRALL SECONDARY STRUCTURE . . 3.115 1.000 0.500 479 98.2 488 ERRALL SURFACE . . . . . . . . 5.049 1.000 0.500 405 95.5 424 ERRALL BURIED . . . . . . . . 3.076 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 33 45 65 84 87 90 DISTCA CA (P) 11.11 36.67 50.00 72.22 93.33 90 DISTCA CA (RMS) 0.84 1.35 1.72 2.48 3.91 DISTCA ALL (N) 59 210 335 486 651 697 716 DISTALL ALL (P) 8.24 29.33 46.79 67.88 90.92 716 DISTALL ALL (RMS) 0.80 1.37 1.86 2.65 4.28 DISTALL END of the results output