####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS104_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS104_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.22 4.22 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 1.75 6.24 LONGEST_CONTINUOUS_SEGMENT: 22 4 - 25 1.93 6.77 LONGEST_CONTINUOUS_SEGMENT: 22 5 - 26 1.94 6.01 LCS_AVERAGE: 19.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 0.99 5.57 LCS_AVERAGE: 11.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 90 3 3 3 4 6 9 12 13 21 21 24 25 37 48 53 67 79 81 84 86 LCS_GDT T 2 T 2 3 3 90 3 3 6 8 11 12 21 31 39 57 64 69 76 78 80 83 85 87 89 89 LCS_GDT D 3 D 3 4 22 90 3 5 14 28 38 46 54 65 69 73 76 79 81 83 85 86 87 88 89 89 LCS_GDT L 4 L 4 4 22 90 3 5 5 9 19 37 54 65 68 74 76 79 81 83 85 86 87 88 89 89 LCS_GDT V 5 V 5 19 22 90 6 27 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 6 A 6 19 22 90 6 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 7 V 7 19 22 90 6 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT W 8 W 8 19 22 90 6 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT D 9 D 9 19 22 90 6 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 10 V 10 19 22 90 6 18 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 11 A 11 19 22 90 6 18 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT L 12 L 12 19 22 90 5 13 23 40 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT S 13 S 13 19 22 90 3 11 19 33 45 58 65 70 71 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT D 14 D 14 19 22 90 5 18 36 42 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 15 G 15 19 22 90 4 18 37 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 16 V 16 19 22 90 6 27 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT H 17 H 17 19 22 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 18 K 18 19 22 90 5 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 19 I 19 19 22 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 20 E 20 19 22 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT F 21 F 21 19 22 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 22 E 22 19 22 90 4 19 39 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT H 23 H 23 19 22 90 4 17 33 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 24 G 24 9 22 90 3 7 22 32 46 53 63 70 71 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 25 T 25 3 22 90 3 3 3 5 8 12 19 52 69 74 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 26 T 26 3 22 90 3 3 4 6 13 20 52 67 71 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT S 27 S 27 11 17 90 4 8 30 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 28 G 28 11 17 90 4 18 34 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 29 K 29 13 17 90 4 12 26 40 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT R 30 R 30 13 17 90 4 12 25 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 31 V 31 13 17 90 4 9 23 32 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 32 V 32 13 17 90 4 12 30 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT Y 33 Y 33 13 17 90 6 27 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 34 V 34 13 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT D 35 D 35 13 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 36 G 36 13 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 37 K 37 13 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 38 E 38 13 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 39 E 39 13 17 90 3 25 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 40 I 40 13 17 90 6 20 36 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT R 41 R 41 13 17 90 3 12 34 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 42 K 42 3 17 90 3 3 22 36 50 56 64 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 43 E 43 3 4 90 3 3 4 4 4 23 28 34 41 56 71 76 81 83 85 86 87 88 89 89 LCS_GDT W 44 W 44 3 4 90 3 3 4 4 4 4 9 18 21 30 45 55 66 78 84 85 87 88 89 89 LCS_GDT M 45 M 45 4 7 90 3 3 5 6 12 23 37 51 61 70 76 79 81 83 85 86 87 88 89 89 LCS_GDT F 46 F 46 4 7 90 3 4 5 9 13 15 22 32 45 56 66 77 81 83 85 86 87 88 89 89 LCS_GDT K 47 K 47 4 7 90 4 5 5 6 10 14 32 43 49 61 70 77 81 83 85 86 87 88 89 89 LCS_GDT L 48 L 48 4 7 90 4 5 5 16 24 36 52 64 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 49 V 49 4 10 90 4 5 5 11 20 44 59 66 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 50 G 50 6 20 90 4 6 12 21 45 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 51 K 51 6 20 90 3 6 10 18 33 58 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 52 E 52 6 20 90 3 12 22 40 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 53 T 53 6 20 90 4 12 31 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT F 54 F 54 6 20 90 4 12 26 44 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT Y 55 Y 55 6 20 90 4 12 22 38 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT V 56 V 56 6 20 90 4 12 22 36 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 57 G 57 6 20 90 3 7 20 25 29 44 57 65 69 73 76 79 81 82 85 86 87 88 89 89 LCS_GDT A 58 A 58 4 20 90 3 8 15 34 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 59 A 59 4 20 90 3 21 37 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 60 K 60 5 20 90 3 4 8 25 45 58 64 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 61 T 61 8 20 90 7 21 37 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 62 K 62 8 20 90 7 21 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 63 A 63 8 20 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 64 T 64 8 20 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 65 I 65 8 20 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT N 66 N 66 8 20 90 5 27 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 67 I 67 8 20 90 6 27 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT D 68 D 68 8 20 90 7 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 69 A 69 7 20 90 4 10 24 42 50 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 70 I 70 7 17 90 4 6 19 21 34 54 63 68 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT S 71 S 71 7 17 90 4 6 9 17 22 35 58 66 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 72 G 72 7 17 90 3 5 7 15 20 31 55 64 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT F 73 F 73 7 17 90 3 6 20 36 50 56 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT A 74 A 74 12 17 90 4 22 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT Y 75 Y 75 12 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 76 E 76 12 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT Y 77 Y 77 12 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT T 78 T 78 12 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT L 79 L 79 12 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT E 80 E 80 12 17 90 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT I 81 I 81 12 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT N 82 N 82 12 17 90 8 22 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT G 83 G 83 12 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 84 K 84 12 17 90 8 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT S 85 S 85 12 17 90 6 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT L 86 L 86 12 16 90 3 11 21 39 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT K 87 K 87 5 16 90 3 5 14 27 33 47 57 63 71 73 76 79 81 83 85 86 87 88 89 89 LCS_GDT K 88 K 88 5 16 90 3 6 20 32 51 60 65 70 71 75 77 79 81 83 85 86 87 88 89 89 LCS_GDT Y 89 Y 89 3 14 90 3 3 4 5 8 26 37 44 52 61 65 73 76 77 81 82 87 88 89 89 LCS_GDT M 90 M 90 3 14 90 3 3 5 15 27 39 46 54 63 70 74 75 77 80 82 86 87 88 89 89 LCS_AVERAGE LCS_A: 43.79 ( 11.63 19.75 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 28 39 45 51 60 65 70 72 75 77 79 81 83 85 86 87 88 89 89 GDT PERCENT_AT 12.22 31.11 43.33 50.00 56.67 66.67 72.22 77.78 80.00 83.33 85.56 87.78 90.00 92.22 94.44 95.56 96.67 97.78 98.89 98.89 GDT RMS_LOCAL 0.37 0.72 0.92 1.21 1.38 1.71 1.89 2.12 2.51 2.56 2.75 2.89 3.02 3.26 3.44 3.55 3.67 3.80 3.95 3.95 GDT RMS_ALL_AT 4.48 4.46 4.48 4.35 4.34 4.42 4.37 4.35 4.31 4.27 4.29 4.28 4.26 4.25 4.26 4.25 4.25 4.26 4.23 4.23 # Checking swapping # possible swapping detected: D 9 D 9 # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: D 68 D 68 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 75 Y 75 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 14.608 0 0.546 1.429 16.603 0.119 0.060 LGA T 2 T 2 10.182 0 0.634 0.620 13.589 1.905 1.088 LGA D 3 D 3 6.002 0 0.253 0.693 7.512 24.762 21.548 LGA L 4 L 4 5.888 0 0.512 0.945 12.153 32.976 17.440 LGA V 5 V 5 1.121 0 0.665 0.551 6.068 77.262 57.211 LGA A 6 A 6 0.888 0 0.077 0.077 0.992 90.476 90.476 LGA V 7 V 7 0.991 0 0.044 0.080 1.088 88.214 89.184 LGA W 8 W 8 0.911 0 0.078 0.156 1.092 90.476 89.184 LGA D 9 D 9 0.947 0 0.060 0.664 1.687 85.952 83.810 LGA V 10 V 10 1.392 0 0.128 1.230 3.048 79.286 74.490 LGA A 11 A 11 1.475 0 0.096 0.098 1.938 77.143 78.000 LGA L 12 L 12 2.809 0 0.118 0.965 5.351 60.952 55.238 LGA S 13 S 13 3.750 0 0.615 0.671 5.163 39.048 40.794 LGA D 14 D 14 2.987 0 0.201 1.019 6.137 59.048 42.262 LGA G 15 G 15 2.156 0 0.094 0.094 2.273 70.952 70.952 LGA V 16 V 16 1.417 0 0.082 0.173 2.447 72.976 71.769 LGA H 17 H 17 1.124 0 0.114 1.144 4.062 88.214 75.048 LGA K 18 K 18 1.295 0 0.083 0.719 2.078 81.429 77.778 LGA I 19 I 19 0.915 0 0.034 0.479 1.863 90.476 87.143 LGA E 20 E 20 0.993 0 0.034 0.674 2.797 85.952 76.190 LGA F 21 F 21 1.417 0 0.115 0.474 2.747 81.429 70.909 LGA E 22 E 22 2.211 0 0.083 0.811 3.947 64.881 62.487 LGA H 23 H 23 2.385 0 0.482 1.061 3.088 66.786 62.571 LGA G 24 G 24 4.327 0 0.586 0.586 5.496 32.976 32.976 LGA T 25 T 25 7.159 0 0.488 0.909 10.579 13.929 8.027 LGA T 26 T 26 4.987 0 0.062 0.207 6.292 30.357 28.027 LGA S 27 S 27 2.409 0 0.513 0.818 4.342 60.952 57.619 LGA G 28 G 28 2.396 0 0.085 0.085 2.443 64.762 64.762 LGA K 29 K 29 2.899 0 0.110 0.933 5.179 59.048 50.899 LGA R 30 R 30 2.665 0 0.088 0.782 4.484 53.571 58.268 LGA V 31 V 31 3.008 0 0.078 0.993 4.571 53.571 50.408 LGA V 32 V 32 2.281 0 0.072 0.083 2.800 66.905 64.898 LGA Y 33 Y 33 1.130 0 0.084 0.392 1.574 81.548 82.976 LGA V 34 V 34 0.734 0 0.052 1.150 2.591 90.476 83.197 LGA D 35 D 35 0.491 0 0.096 1.013 3.051 97.619 82.619 LGA G 36 G 36 0.795 0 0.159 0.159 1.265 88.214 88.214 LGA K 37 K 37 0.776 0 0.093 0.859 3.464 85.952 80.265 LGA E 38 E 38 1.181 0 0.278 0.887 4.565 79.524 63.069 LGA E 39 E 39 1.499 0 0.133 1.027 2.528 79.286 75.079 LGA I 40 I 40 2.007 0 0.592 0.769 4.841 65.238 55.357 LGA R 41 R 41 2.260 0 0.593 1.166 3.396 62.857 63.030 LGA K 42 K 42 4.051 0 0.608 0.683 11.908 30.833 17.937 LGA E 43 E 43 9.497 0 0.116 1.280 16.751 2.857 1.270 LGA W 44 W 44 10.947 0 0.656 1.673 20.775 1.190 0.340 LGA M 45 M 45 7.225 0 0.594 0.908 8.602 6.786 16.369 LGA F 46 F 46 9.969 0 0.036 0.279 11.898 0.595 0.216 LGA K 47 K 47 9.755 0 0.564 1.057 10.280 3.214 2.540 LGA L 48 L 48 6.740 0 0.329 1.377 8.907 17.738 11.726 LGA V 49 V 49 6.408 0 0.301 1.199 9.380 33.095 20.204 LGA G 50 G 50 3.314 0 0.497 0.497 4.785 45.357 45.357 LGA K 51 K 51 3.689 0 0.142 1.019 7.006 52.143 39.048 LGA E 52 E 52 2.720 0 0.129 0.921 6.886 55.357 39.418 LGA T 53 T 53 2.253 0 0.072 0.072 2.499 64.762 68.231 LGA F 54 F 54 2.549 0 0.113 1.167 6.362 62.857 48.225 LGA Y 55 Y 55 3.130 0 0.065 0.244 3.398 50.000 50.000 LGA V 56 V 56 3.138 0 0.078 0.112 3.942 46.667 51.224 LGA G 57 G 57 5.840 0 0.561 0.561 5.840 33.333 33.333 LGA A 58 A 58 3.133 0 0.643 0.594 4.598 43.929 43.810 LGA A 59 A 59 1.518 0 0.723 0.677 2.015 70.833 71.238 LGA K 60 K 60 3.827 0 0.133 0.910 11.917 50.119 27.937 LGA T 61 T 61 1.520 0 0.036 1.076 3.493 68.810 67.279 LGA K 62 K 62 1.290 0 0.079 0.858 3.185 81.429 73.333 LGA A 63 A 63 0.775 0 0.045 0.077 1.025 88.214 88.667 LGA T 64 T 64 0.517 0 0.014 0.118 0.877 97.619 94.558 LGA I 65 I 65 0.681 0 0.657 0.802 3.837 74.286 79.167 LGA N 66 N 66 0.886 0 0.358 0.978 3.041 86.190 75.714 LGA I 67 I 67 1.053 0 0.054 0.508 2.886 88.214 78.571 LGA D 68 D 68 0.792 0 0.126 1.151 3.546 90.595 75.238 LGA A 69 A 69 2.968 0 0.103 0.141 5.886 45.119 42.381 LGA I 70 I 70 5.770 0 0.120 0.700 7.400 32.381 22.500 LGA S 71 S 71 7.969 0 0.212 0.313 9.385 5.119 5.397 LGA G 72 G 72 8.518 0 0.383 0.383 8.518 7.619 7.619 LGA F 73 F 73 3.585 0 0.326 0.764 7.016 59.524 35.887 LGA A 74 A 74 1.625 0 0.159 0.226 3.600 70.952 65.429 LGA Y 75 Y 75 0.797 0 0.123 1.538 10.095 97.619 50.317 LGA E 76 E 76 0.430 0 0.082 0.145 0.638 92.857 95.767 LGA Y 77 Y 77 0.681 0 0.043 0.320 1.634 90.476 85.992 LGA T 78 T 78 1.065 0 0.031 1.014 2.638 88.214 80.612 LGA L 79 L 79 0.695 0 0.067 0.919 2.040 90.476 83.929 LGA E 80 E 80 0.724 0 0.058 0.660 2.972 92.857 83.915 LGA I 81 I 81 0.994 0 0.024 0.121 1.207 85.952 88.214 LGA N 82 N 82 1.910 0 0.070 0.798 2.117 70.833 70.893 LGA G 83 G 83 1.634 0 0.066 0.066 1.654 72.857 72.857 LGA K 84 K 84 1.195 0 0.049 1.130 6.335 85.952 62.011 LGA S 85 S 85 0.636 0 0.098 0.656 2.350 79.643 80.317 LGA L 86 L 86 3.093 0 0.079 1.339 8.150 59.405 41.369 LGA K 87 K 87 5.185 0 0.058 0.857 12.340 30.119 15.026 LGA K 88 K 88 3.752 0 0.096 1.217 7.602 26.190 35.132 LGA Y 89 Y 89 9.146 0 0.217 1.162 15.588 6.667 2.222 LGA M 90 M 90 8.005 0 0.208 0.670 11.637 2.262 7.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.224 4.124 5.311 59.085 53.794 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 70 2.12 63.611 55.640 3.153 LGA_LOCAL RMSD: 2.120 Number of atoms: 70 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.346 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.224 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.187437 * X + 0.976653 * Y + 0.104960 * Z + -25.802448 Y_new = 0.447294 * X + -0.179996 * Y + 0.876087 * Z + -40.103863 Z_new = 0.874526 * X + -0.117263 * Y + -0.470589 * Z + -16.029646 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.173980 -1.064457 -2.897383 [DEG: 67.2641 -60.9889 -166.0078 ] ZXZ: 3.022355 2.060755 1.704088 [DEG: 173.1682 118.0725 97.6371 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS104_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS104_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 70 2.12 55.640 4.22 REMARK ---------------------------------------------------------- MOLECULE T0540TS104_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 23.326 8.272 5.978 1.00260.94 N ATOM 2 CA MET 1 24.201 7.453 5.115 1.00260.94 C ATOM 3 CB MET 1 23.658 7.478 3.675 1.00260.94 C ATOM 4 CG MET 1 23.968 6.221 2.854 1.00260.94 C ATOM 5 SD MET 1 25.728 5.844 2.605 1.00260.94 S ATOM 6 CE MET 1 25.987 5.183 4.277 1.00260.94 C ATOM 7 C MET 1 25.566 8.054 5.157 1.00260.94 C ATOM 8 O MET 1 26.427 7.610 5.915 1.00260.94 O ATOM 9 N THR 2 25.807 9.103 4.349 1.00330.09 N ATOM 10 CA THR 2 27.105 9.699 4.413 1.00330.09 C ATOM 11 CB THR 2 27.330 10.760 3.377 1.00330.09 C ATOM 12 OG1 THR 2 26.399 11.819 3.544 1.00330.09 O ATOM 13 CG2 THR 2 27.168 10.121 1.987 1.00330.09 C ATOM 14 C THR 2 27.224 10.309 5.764 1.00330.09 C ATOM 15 O THR 2 26.541 11.278 6.096 1.00330.09 O ATOM 16 N ASP 3 28.118 9.730 6.583 1.00223.92 N ATOM 17 CA ASP 3 28.312 10.197 7.915 1.00223.92 C ATOM 18 CB ASP 3 28.969 9.132 8.808 1.00223.92 C ATOM 19 CG ASP 3 28.673 9.439 10.266 1.00223.92 C ATOM 20 OD1 ASP 3 27.892 10.388 10.535 1.00223.92 O ATOM 21 OD2 ASP 3 29.218 8.706 11.136 1.00223.92 O ATOM 22 C ASP 3 29.258 11.341 7.792 1.00223.92 C ATOM 23 O ASP 3 30.424 11.241 8.167 1.00223.92 O ATOM 24 N LEU 4 28.757 12.460 7.239 1.00327.05 N ATOM 25 CA LEU 4 29.505 13.675 7.108 1.00327.05 C ATOM 26 CB LEU 4 29.985 14.214 8.471 1.00327.05 C ATOM 27 CG LEU 4 28.805 14.594 9.394 1.00327.05 C ATOM 28 CD1 LEU 4 28.130 13.347 9.975 1.00327.05 C ATOM 29 CD2 LEU 4 29.192 15.623 10.464 1.00327.05 C ATOM 30 C LEU 4 30.679 13.512 6.183 1.00327.05 C ATOM 31 O LEU 4 31.606 14.321 6.218 1.00327.05 O ATOM 32 N VAL 5 30.670 12.489 5.301 1.00237.55 N ATOM 33 CA VAL 5 31.763 12.358 4.375 1.00237.55 C ATOM 34 CB VAL 5 32.145 10.938 4.052 1.00237.55 C ATOM 35 CG1 VAL 5 32.855 10.324 5.266 1.00237.55 C ATOM 36 CG2 VAL 5 30.875 10.166 3.657 1.00237.55 C ATOM 37 C VAL 5 31.401 13.049 3.096 1.00237.55 C ATOM 38 O VAL 5 30.302 12.877 2.574 1.00237.55 O ATOM 39 N ALA 6 32.329 13.871 2.559 1.00115.08 N ATOM 40 CA ALA 6 32.053 14.575 1.337 1.00115.08 C ATOM 41 CB ALA 6 31.712 16.060 1.535 1.00115.08 C ATOM 42 C ALA 6 33.269 14.530 0.474 1.00115.08 C ATOM 43 O ALA 6 34.390 14.408 0.963 1.00115.08 O ATOM 44 N VAL 7 33.080 14.609 -0.856 1.00105.01 N ATOM 45 CA VAL 7 34.238 14.602 -1.695 1.00105.01 C ATOM 46 CB VAL 7 34.504 13.282 -2.351 1.00105.01 C ATOM 47 CG1 VAL 7 35.736 13.439 -3.256 1.00105.01 C ATOM 48 CG2 VAL 7 34.659 12.210 -1.260 1.00105.01 C ATOM 49 C VAL 7 34.028 15.583 -2.796 1.00105.01 C ATOM 50 O VAL 7 32.903 15.829 -3.226 1.00105.01 O ATOM 51 N TRP 8 35.127 16.203 -3.262 1.00225.66 N ATOM 52 CA TRP 8 35.003 17.087 -4.377 1.00225.66 C ATOM 53 CB TRP 8 35.018 18.573 -3.992 1.00225.66 C ATOM 54 CG TRP 8 33.857 18.974 -3.116 1.00225.66 C ATOM 55 CD2 TRP 8 33.893 18.902 -1.682 1.00225.66 C ATOM 56 CD1 TRP 8 32.627 19.462 -3.447 1.00225.66 C ATOM 57 NE1 TRP 8 31.896 19.703 -2.307 1.00225.66 N ATOM 58 CE2 TRP 8 32.666 19.362 -1.217 1.00225.66 C ATOM 59 CE3 TRP 8 34.873 18.488 -0.827 1.00225.66 C ATOM 60 CZ2 TRP 8 32.404 19.419 0.117 1.00225.66 C ATOM 61 CZ3 TRP 8 34.601 18.543 0.522 1.00225.66 C ATOM 62 CH2 TRP 8 33.386 19.001 0.986 1.00225.66 C ATOM 63 C TRP 8 36.184 16.843 -5.257 1.00225.66 C ATOM 64 O TRP 8 37.270 16.514 -4.781 1.00225.66 O ATOM 65 N ASP 9 36.000 16.976 -6.583 1.00105.57 N ATOM 66 CA ASP 9 37.114 16.767 -7.457 1.00105.57 C ATOM 67 CB ASP 9 36.811 15.846 -8.652 1.00105.57 C ATOM 68 CG ASP 9 36.492 14.467 -8.098 1.00105.57 C ATOM 69 OD1 ASP 9 35.749 14.410 -7.084 1.00105.57 O ATOM 70 OD2 ASP 9 36.993 13.458 -8.662 1.00105.57 O ATOM 71 C ASP 9 37.468 18.103 -8.003 1.00105.57 C ATOM 72 O ASP 9 36.712 18.693 -8.772 1.00105.57 O ATOM 73 N VAL 10 38.634 18.634 -7.608 1.00159.72 N ATOM 74 CA VAL 10 38.960 19.931 -8.105 1.00159.72 C ATOM 75 CB VAL 10 39.288 20.914 -7.026 1.00159.72 C ATOM 76 CG1 VAL 10 40.565 20.439 -6.322 1.00159.72 C ATOM 77 CG2 VAL 10 39.402 22.315 -7.647 1.00159.72 C ATOM 78 C VAL 10 40.155 19.784 -8.964 1.00159.72 C ATOM 79 O VAL 10 41.076 19.029 -8.653 1.00159.72 O ATOM 80 N ALA 11 40.161 20.502 -10.096 1.00 73.66 N ATOM 81 CA ALA 11 41.312 20.368 -10.919 1.00 73.66 C ATOM 82 CB ALA 11 40.998 20.499 -12.420 1.00 73.66 C ATOM 83 C ALA 11 42.248 21.459 -10.539 1.00 73.66 C ATOM 84 O ALA 11 42.036 22.628 -10.858 1.00 73.66 O ATOM 85 N LEU 12 43.323 21.086 -9.824 1.00204.22 N ATOM 86 CA LEU 12 44.339 22.039 -9.529 1.00204.22 C ATOM 87 CB LEU 12 45.116 21.868 -8.211 1.00204.22 C ATOM 88 CG LEU 12 44.457 22.518 -6.980 1.00204.22 C ATOM 89 CD1 LEU 12 43.139 21.847 -6.591 1.00204.22 C ATOM 90 CD2 LEU 12 45.447 22.602 -5.811 1.00204.22 C ATOM 91 C LEU 12 45.316 21.908 -10.633 1.00204.22 C ATOM 92 O LEU 12 45.011 21.379 -11.701 1.00204.22 O ATOM 93 N SER 13 46.531 22.402 -10.393 1.00218.23 N ATOM 94 CA SER 13 47.497 22.460 -11.437 1.00218.23 C ATOM 95 CB SER 13 48.832 23.037 -10.964 1.00218.23 C ATOM 96 OG SER 13 48.615 24.327 -10.418 1.00218.23 O ATOM 97 C SER 13 47.780 21.112 -12.016 1.00218.23 C ATOM 98 O SER 13 48.069 20.138 -11.323 1.00218.23 O ATOM 99 N ASP 14 47.705 21.062 -13.355 1.00224.43 N ATOM 100 CA ASP 14 48.077 19.931 -14.147 1.00224.43 C ATOM 101 CB ASP 14 49.598 19.735 -14.218 1.00224.43 C ATOM 102 CG ASP 14 50.185 20.945 -14.927 1.00224.43 C ATOM 103 OD1 ASP 14 49.397 21.704 -15.553 1.00224.43 O ATOM 104 OD2 ASP 14 51.428 21.129 -14.846 1.00224.43 O ATOM 105 C ASP 14 47.490 18.663 -13.635 1.00224.43 C ATOM 106 O ASP 14 48.206 17.680 -13.455 1.00224.43 O ATOM 107 N GLY 15 46.173 18.625 -13.387 1.00 62.48 N ATOM 108 CA GLY 15 45.663 17.351 -12.990 1.00 62.48 C ATOM 109 C GLY 15 44.511 17.562 -12.079 1.00 62.48 C ATOM 110 O GLY 15 44.238 18.677 -11.638 1.00 62.48 O ATOM 111 N VAL 16 43.800 16.464 -11.770 1.00111.28 N ATOM 112 CA VAL 16 42.699 16.600 -10.877 1.00111.28 C ATOM 113 CB VAL 16 41.458 15.857 -11.277 1.00111.28 C ATOM 114 CG1 VAL 16 40.902 16.480 -12.566 1.00111.28 C ATOM 115 CG2 VAL 16 41.796 14.363 -11.395 1.00111.28 C ATOM 116 C VAL 16 43.116 16.057 -9.561 1.00111.28 C ATOM 117 O VAL 16 43.700 14.978 -9.462 1.00111.28 O ATOM 118 N HIS 17 42.840 16.834 -8.503 1.00100.87 N ATOM 119 CA HIS 17 43.141 16.369 -7.193 1.00100.87 C ATOM 120 ND1 HIS 17 46.443 16.769 -6.635 1.00100.87 N ATOM 121 CG HIS 17 45.362 17.574 -6.916 1.00100.87 C ATOM 122 CB HIS 17 43.982 17.355 -6.363 1.00100.87 C ATOM 123 NE2 HIS 17 47.181 18.358 -8.001 1.00100.87 N ATOM 124 CD2 HIS 17 45.831 18.539 -7.753 1.00100.87 C ATOM 125 CE1 HIS 17 47.503 17.282 -7.308 1.00100.87 C ATOM 126 C HIS 17 41.822 16.214 -6.523 1.00100.87 C ATOM 127 O HIS 17 41.029 17.154 -6.477 1.00100.87 O ATOM 128 N LYS 18 41.519 15.004 -6.024 1.00167.08 N ATOM 129 CA LYS 18 40.263 14.904 -5.355 1.00167.08 C ATOM 130 CB LYS 18 39.570 13.524 -5.423 1.00167.08 C ATOM 131 CG LYS 18 40.419 12.317 -5.027 1.00167.08 C ATOM 132 CD LYS 18 39.589 11.059 -4.752 1.00167.08 C ATOM 133 CE LYS 18 38.251 11.025 -5.497 1.00167.08 C ATOM 134 NZ LYS 18 37.462 9.848 -5.068 1.00167.08 N ATOM 135 C LYS 18 40.475 15.305 -3.933 1.00167.08 C ATOM 136 O LYS 18 41.521 15.031 -3.349 1.00167.08 O ATOM 137 N ILE 19 39.485 16.009 -3.350 1.00148.91 N ATOM 138 CA ILE 19 39.607 16.407 -1.982 1.00148.91 C ATOM 139 CB ILE 19 39.234 17.841 -1.703 1.00148.91 C ATOM 140 CG2 ILE 19 39.353 18.067 -0.188 1.00148.91 C ATOM 141 CG1 ILE 19 40.097 18.818 -2.515 1.00148.91 C ATOM 142 CD1 ILE 19 39.731 18.843 -3.993 1.00148.91 C ATOM 143 C ILE 19 38.638 15.554 -1.235 1.00148.91 C ATOM 144 O ILE 19 37.462 15.471 -1.587 1.00148.91 O ATOM 145 N GLU 20 39.129 14.888 -0.175 1.00208.36 N ATOM 146 CA GLU 20 38.328 13.969 0.573 1.00208.36 C ATOM 147 CB GLU 20 39.089 12.649 0.840 1.00208.36 C ATOM 148 CG GLU 20 38.209 11.425 1.100 1.00208.36 C ATOM 149 CD GLU 20 38.545 10.334 0.084 1.00208.36 C ATOM 150 OE1 GLU 20 39.708 9.852 0.103 1.00208.36 O ATOM 151 OE2 GLU 20 37.644 9.957 -0.716 1.00208.36 O ATOM 152 C GLU 20 38.030 14.618 1.878 1.00208.36 C ATOM 153 O GLU 20 38.854 15.326 2.455 1.00208.36 O ATOM 154 N PHE 21 36.801 14.405 2.357 1.00395.29 N ATOM 155 CA PHE 21 36.344 15.017 3.553 1.00395.29 C ATOM 156 CB PHE 21 35.176 15.905 3.122 1.00395.29 C ATOM 157 CG PHE 21 34.723 16.773 4.216 1.00395.29 C ATOM 158 CD1 PHE 21 35.367 16.791 5.425 1.00395.29 C ATOM 159 CD2 PHE 21 33.658 17.602 4.001 1.00395.29 C ATOM 160 CE1 PHE 21 34.929 17.619 6.429 1.00395.29 C ATOM 161 CE2 PHE 21 33.219 18.430 5.001 1.00395.29 C ATOM 162 CZ PHE 21 33.851 18.439 6.220 1.00395.29 C ATOM 163 C PHE 21 35.858 13.877 4.386 1.00395.29 C ATOM 164 O PHE 21 34.743 13.407 4.182 1.00395.29 O ATOM 165 N GLU 22 36.675 13.392 5.344 1.00266.58 N ATOM 166 CA GLU 22 36.234 12.310 6.183 1.00266.58 C ATOM 167 CB GLU 22 37.353 11.279 6.490 1.00266.58 C ATOM 168 CG GLU 22 36.908 10.099 7.365 1.00266.58 C ATOM 169 CD GLU 22 38.025 9.059 7.474 1.00266.58 C ATOM 170 OE1 GLU 22 38.422 8.489 6.424 1.00266.58 O ATOM 171 OE2 GLU 22 38.487 8.810 8.622 1.00266.58 O ATOM 172 C GLU 22 35.825 12.954 7.461 1.00266.58 C ATOM 173 O GLU 22 36.638 13.575 8.134 1.00266.58 O ATOM 174 N HIS 23 34.545 12.831 7.849 1.00420.35 N ATOM 175 CA HIS 23 34.203 13.575 9.020 1.00420.35 C ATOM 176 ND1 HIS 23 32.018 15.496 10.899 1.00420.35 N ATOM 177 CG HIS 23 32.761 15.552 9.745 1.00420.35 C ATOM 178 CB HIS 23 32.933 14.406 8.797 1.00420.35 C ATOM 179 NE2 HIS 23 32.802 17.571 10.756 1.00420.35 N ATOM 180 CD2 HIS 23 33.236 16.825 9.673 1.00420.35 C ATOM 181 CE1 HIS 23 32.074 16.728 11.463 1.00420.35 C ATOM 182 C HIS 23 33.957 12.634 10.155 1.00420.35 C ATOM 183 O HIS 23 33.242 12.990 11.086 1.00420.35 O ATOM 184 N GLY 24 34.601 11.444 10.156 1.00164.60 N ATOM 185 CA GLY 24 34.345 10.463 11.175 1.00164.60 C ATOM 186 C GLY 24 34.691 11.024 12.516 1.00164.60 C ATOM 187 O GLY 24 33.938 10.876 13.477 1.00164.60 O ATOM 188 N THR 25 35.853 11.682 12.641 1.00322.40 N ATOM 189 CA THR 25 36.114 12.273 13.914 1.00322.40 C ATOM 190 CB THR 25 37.577 12.468 14.169 1.00322.40 C ATOM 191 OG1 THR 25 38.247 11.217 14.110 1.00322.40 O ATOM 192 CG2 THR 25 37.759 13.099 15.556 1.00322.40 C ATOM 193 C THR 25 35.454 13.607 13.815 1.00322.40 C ATOM 194 O THR 25 36.102 14.621 13.591 1.00322.40 O ATOM 195 N THR 26 34.134 13.602 14.074 1.00358.43 N ATOM 196 CA THR 26 33.149 14.628 13.857 1.00358.43 C ATOM 197 CB THR 26 31.826 14.238 14.450 1.00358.43 C ATOM 198 OG1 THR 26 31.381 13.011 13.899 1.00358.43 O ATOM 199 CG2 THR 26 30.804 15.352 14.180 1.00358.43 C ATOM 200 C THR 26 33.488 15.892 14.552 1.00358.43 C ATOM 201 O THR 26 33.278 16.974 14.007 1.00358.43 O ATOM 202 N SER 27 34.015 15.793 15.777 1.00328.69 N ATOM 203 CA SER 27 34.092 16.978 16.563 1.00328.69 C ATOM 204 CB SER 27 34.596 16.723 17.990 1.00328.69 C ATOM 205 OG SER 27 34.593 17.941 18.715 1.00328.69 O ATOM 206 C SER 27 34.931 18.053 15.974 1.00328.69 C ATOM 207 O SER 27 36.157 18.057 16.061 1.00328.69 O ATOM 208 N GLY 28 34.236 19.007 15.348 1.00408.49 N ATOM 209 CA GLY 28 34.760 20.270 14.945 1.00408.49 C ATOM 210 C GLY 28 35.981 20.173 14.104 1.00408.49 C ATOM 211 O GLY 28 36.746 21.130 14.031 1.00408.49 O ATOM 212 N LYS 29 36.238 19.052 13.430 1.00527.25 N ATOM 213 CA LYS 29 37.410 19.141 12.622 1.00527.25 C ATOM 214 CB LYS 29 38.277 17.887 12.630 1.00527.25 C ATOM 215 CG LYS 29 38.816 17.568 14.015 1.00527.25 C ATOM 216 CD LYS 29 39.672 16.309 14.019 1.00527.25 C ATOM 217 CE LYS 29 41.059 16.557 13.436 1.00527.25 C ATOM 218 NZ LYS 29 41.662 15.276 13.008 1.00527.25 N ATOM 219 C LYS 29 36.886 19.273 11.241 1.00527.25 C ATOM 220 O LYS 29 35.815 18.759 10.934 1.00527.25 O ATOM 221 N ARG 30 37.590 20.002 10.365 1.00596.37 N ATOM 222 CA ARG 30 37.068 20.062 9.039 1.00596.37 C ATOM 223 CB ARG 30 36.487 21.437 8.653 1.00596.37 C ATOM 224 CG ARG 30 35.435 21.901 9.667 1.00596.37 C ATOM 225 CD ARG 30 34.481 22.991 9.185 1.00596.37 C ATOM 226 NE ARG 30 33.940 23.658 10.406 1.00596.37 N ATOM 227 CZ ARG 30 32.606 23.687 10.698 1.00596.37 C ATOM 228 NH1 ARG 30 31.697 23.079 9.883 1.00596.37 N ATOM 229 NH2 ARG 30 32.172 24.356 11.805 1.00596.37 N ATOM 230 C ARG 30 38.209 19.750 8.160 1.00596.37 C ATOM 231 O ARG 30 39.330 20.161 8.435 1.00596.37 O ATOM 232 N VAL 31 37.987 18.997 7.075 1.00384.51 N ATOM 233 CA VAL 31 39.215 18.665 6.446 1.00384.51 C ATOM 234 CB VAL 31 39.707 17.288 6.781 1.00384.51 C ATOM 235 CG1 VAL 31 40.017 17.214 8.284 1.00384.51 C ATOM 236 CG2 VAL 31 38.656 16.274 6.303 1.00384.51 C ATOM 237 C VAL 31 39.103 18.699 4.975 1.00384.51 C ATOM 238 O VAL 31 38.086 18.375 4.363 1.00384.51 O ATOM 239 N VAL 32 40.224 19.126 4.400 1.00216.00 N ATOM 240 CA VAL 32 40.498 19.103 3.014 1.00216.00 C ATOM 241 CB VAL 32 41.176 20.360 2.554 1.00216.00 C ATOM 242 CG1 VAL 32 41.685 20.170 1.123 1.00216.00 C ATOM 243 CG2 VAL 32 40.212 21.539 2.710 1.00216.00 C ATOM 244 C VAL 32 41.556 18.062 2.940 1.00216.00 C ATOM 245 O VAL 32 42.583 18.187 3.605 1.00216.00 O ATOM 246 N TYR 33 41.319 16.981 2.182 1.00234.33 N ATOM 247 CA TYR 33 42.376 16.039 1.980 1.00234.33 C ATOM 248 CB TYR 33 42.009 14.549 2.223 1.00234.33 C ATOM 249 CG TYR 33 42.077 14.159 3.673 1.00234.33 C ATOM 250 CD1 TYR 33 41.228 14.695 4.610 1.00234.33 C ATOM 251 CD2 TYR 33 42.974 13.204 4.103 1.00234.33 C ATOM 252 CE1 TYR 33 41.285 14.322 5.934 1.00234.33 C ATOM 253 CE2 TYR 33 43.037 12.823 5.428 1.00234.33 C ATOM 254 CZ TYR 33 42.194 13.386 6.354 1.00234.33 C ATOM 255 OH TYR 33 42.245 13.008 7.714 1.00234.33 O ATOM 256 C TYR 33 42.715 16.177 0.540 1.00234.33 C ATOM 257 O TYR 33 41.863 15.978 -0.324 1.00234.33 O ATOM 258 N VAL 34 43.972 16.552 0.240 1.00204.29 N ATOM 259 CA VAL 34 44.315 16.751 -1.137 1.00204.29 C ATOM 260 CB VAL 34 44.900 18.105 -1.442 1.00204.29 C ATOM 261 CG1 VAL 34 43.886 19.191 -1.063 1.00204.29 C ATOM 262 CG2 VAL 34 46.248 18.251 -0.726 1.00204.29 C ATOM 263 C VAL 34 45.358 15.747 -1.516 1.00204.29 C ATOM 264 O VAL 34 46.316 15.511 -0.782 1.00204.29 O ATOM 265 N ASP 35 45.149 15.100 -2.678 1.00193.60 N ATOM 266 CA ASP 35 46.042 14.148 -3.274 1.00193.60 C ATOM 267 CB ASP 35 47.052 14.693 -4.315 1.00193.60 C ATOM 268 CG ASP 35 47.960 15.792 -3.782 1.00193.60 C ATOM 269 OD1 ASP 35 47.434 16.890 -3.461 1.00193.60 O ATOM 270 OD2 ASP 35 49.196 15.559 -3.719 1.00193.60 O ATOM 271 C ASP 35 46.699 13.251 -2.277 1.00193.60 C ATOM 272 O ASP 35 47.923 13.166 -2.212 1.00193.60 O ATOM 273 N GLY 36 45.888 12.553 -1.462 1.00 61.61 N ATOM 274 CA GLY 36 46.411 11.552 -0.579 1.00 61.61 C ATOM 275 C GLY 36 47.170 12.152 0.563 1.00 61.61 C ATOM 276 O GLY 36 48.092 11.527 1.084 1.00 61.61 O ATOM 277 N LYS 37 46.825 13.380 0.988 1.00182.11 N ATOM 278 CA LYS 37 47.547 13.923 2.102 1.00182.11 C ATOM 279 CB LYS 37 48.569 14.982 1.656 1.00182.11 C ATOM 280 CG LYS 37 49.725 15.213 2.625 1.00182.11 C ATOM 281 CD LYS 37 50.867 16.026 2.009 1.00182.11 C ATOM 282 CE LYS 37 51.682 15.258 0.967 1.00182.11 C ATOM 283 NZ LYS 37 52.623 16.175 0.286 1.00182.11 N ATOM 284 C LYS 37 46.530 14.581 2.989 1.00182.11 C ATOM 285 O LYS 37 45.539 15.110 2.489 1.00182.11 O ATOM 286 N GLU 38 46.716 14.532 4.330 1.00305.62 N ATOM 287 CA GLU 38 45.779 15.213 5.188 1.00305.62 C ATOM 288 CB GLU 38 45.394 14.429 6.458 1.00305.62 C ATOM 289 CG GLU 38 46.556 14.075 7.390 1.00305.62 C ATOM 290 CD GLU 38 46.946 12.628 7.154 1.00305.62 C ATOM 291 OE1 GLU 38 46.995 12.205 5.969 1.00305.62 O ATOM 292 OE2 GLU 38 47.192 11.921 8.167 1.00305.62 O ATOM 293 C GLU 38 46.423 16.494 5.614 1.00305.62 C ATOM 294 O GLU 38 46.702 16.737 6.787 1.00305.62 O ATOM 295 N GLU 39 46.631 17.384 4.640 1.00245.80 N ATOM 296 CA GLU 39 47.401 18.564 4.861 1.00245.80 C ATOM 297 CB GLU 39 47.693 19.248 3.519 1.00245.80 C ATOM 298 CG GLU 39 48.885 20.195 3.523 1.00245.80 C ATOM 299 CD GLU 39 49.221 20.439 2.062 1.00245.80 C ATOM 300 OE1 GLU 39 48.438 19.969 1.195 1.00245.80 O ATOM 301 OE2 GLU 39 50.264 21.092 1.790 1.00245.80 O ATOM 302 C GLU 39 46.773 19.581 5.770 1.00245.80 C ATOM 303 O GLU 39 47.367 19.975 6.773 1.00245.80 O ATOM 304 N ILE 40 45.518 19.979 5.501 1.00275.85 N ATOM 305 CA ILE 40 45.071 21.184 6.145 1.00275.85 C ATOM 306 CB ILE 40 44.210 21.927 5.158 1.00275.85 C ATOM 307 CG2 ILE 40 43.859 23.304 5.712 1.00275.85 C ATOM 308 CG1 ILE 40 44.931 22.042 3.804 1.00275.85 C ATOM 309 CD1 ILE 40 46.248 22.813 3.852 1.00275.85 C ATOM 310 C ILE 40 44.237 20.859 7.352 1.00275.85 C ATOM 311 O ILE 40 43.528 21.705 7.893 1.00275.85 O ATOM 312 N ARG 41 44.368 19.646 7.895 1.00419.14 N ATOM 313 CA ARG 41 43.433 19.299 8.921 1.00419.14 C ATOM 314 CB ARG 41 43.450 17.796 9.262 1.00419.14 C ATOM 315 CG ARG 41 44.773 17.261 9.811 1.00419.14 C ATOM 316 CD ARG 41 44.909 15.739 9.690 1.00419.14 C ATOM 317 NE ARG 41 43.704 15.109 10.301 1.00419.14 N ATOM 318 CZ ARG 41 43.574 13.750 10.308 1.00419.14 C ATOM 319 NH1 ARG 41 44.578 12.964 9.820 1.00419.14 N ATOM 320 NH2 ARG 41 42.434 13.178 10.796 1.00419.14 N ATOM 321 C ARG 41 43.579 20.079 10.197 1.00419.14 C ATOM 322 O ARG 41 42.593 20.600 10.713 1.00419.14 O ATOM 323 N LYS 42 44.804 20.219 10.738 1.00351.97 N ATOM 324 CA LYS 42 44.887 20.750 12.072 1.00351.97 C ATOM 325 CB LYS 42 46.307 20.773 12.643 1.00351.97 C ATOM 326 CG LYS 42 46.882 19.400 12.956 1.00351.97 C ATOM 327 CD LYS 42 47.237 18.591 11.716 1.00351.97 C ATOM 328 CE LYS 42 48.094 17.371 12.037 1.00351.97 C ATOM 329 NZ LYS 42 49.393 17.813 12.594 1.00351.97 N ATOM 330 C LYS 42 44.427 22.155 12.204 1.00351.97 C ATOM 331 O LYS 42 43.567 22.467 13.028 1.00351.97 O ATOM 332 N GLU 43 44.985 23.046 11.375 1.00248.67 N ATOM 333 CA GLU 43 44.720 24.428 11.613 1.00248.67 C ATOM 334 CB GLU 43 45.453 25.352 10.630 1.00248.67 C ATOM 335 CG GLU 43 45.189 26.835 10.876 1.00248.67 C ATOM 336 CD GLU 43 45.970 27.602 9.825 1.00248.67 C ATOM 337 OE1 GLU 43 46.680 26.939 9.024 1.00248.67 O ATOM 338 OE2 GLU 43 45.867 28.857 9.805 1.00248.67 O ATOM 339 C GLU 43 43.276 24.683 11.448 1.00248.67 C ATOM 340 O GLU 43 42.637 25.319 12.286 1.00248.67 O ATOM 341 N TRP 44 42.708 24.163 10.359 1.00652.76 N ATOM 342 CA TRP 44 41.354 24.527 10.137 1.00652.76 C ATOM 343 CB TRP 44 40.946 24.660 8.695 1.00652.76 C ATOM 344 CG TRP 44 41.454 26.052 8.486 1.00652.76 C ATOM 345 CD2 TRP 44 42.696 26.465 7.893 1.00652.76 C ATOM 346 CD1 TRP 44 40.840 27.186 8.918 1.00652.76 C ATOM 347 NE1 TRP 44 41.619 28.278 8.638 1.00652.76 N ATOM 348 CE2 TRP 44 42.764 27.852 8.007 1.00652.76 C ATOM 349 CE3 TRP 44 43.700 25.758 7.308 1.00652.76 C ATOM 350 CZ2 TRP 44 43.835 28.548 7.535 1.00652.76 C ATOM 351 CZ3 TRP 44 44.780 26.461 6.825 1.00652.76 C ATOM 352 CH2 TRP 44 44.844 27.830 6.939 1.00652.76 C ATOM 353 C TRP 44 40.407 23.916 11.077 1.00652.76 C ATOM 354 O TRP 44 39.325 24.448 11.323 1.00652.76 O ATOM 355 N MET 45 40.799 22.777 11.639 1.00319.20 N ATOM 356 CA MET 45 39.957 22.207 12.634 1.00319.20 C ATOM 357 CB MET 45 40.617 20.989 13.296 1.00319.20 C ATOM 358 CG MET 45 39.906 20.509 14.561 1.00319.20 C ATOM 359 SD MET 45 40.847 19.296 15.535 1.00319.20 S ATOM 360 CE MET 45 39.637 19.280 16.886 1.00319.20 C ATOM 361 C MET 45 39.800 23.221 13.724 1.00319.20 C ATOM 362 O MET 45 38.691 23.482 14.189 1.00319.20 O ATOM 363 N PHE 46 40.907 23.856 14.145 1.00401.30 N ATOM 364 CA PHE 46 40.742 24.780 15.223 1.00401.30 C ATOM 365 CB PHE 46 42.025 25.369 15.838 1.00401.30 C ATOM 366 CG PHE 46 42.442 24.438 16.920 1.00401.30 C ATOM 367 CD1 PHE 46 41.583 24.212 17.971 1.00401.30 C ATOM 368 CD2 PHE 46 43.677 23.834 16.926 1.00401.30 C ATOM 369 CE1 PHE 46 41.931 23.369 18.997 1.00401.30 C ATOM 370 CE2 PHE 46 44.032 22.989 17.953 1.00401.30 C ATOM 371 CZ PHE 46 43.159 22.753 18.987 1.00401.30 C ATOM 372 C PHE 46 39.872 25.915 14.840 1.00401.30 C ATOM 373 O PHE 46 39.037 26.348 15.632 1.00401.30 O ATOM 374 N LYS 47 40.010 26.435 13.613 1.00371.94 N ATOM 375 CA LYS 47 39.231 27.604 13.349 1.00371.94 C ATOM 376 CB LYS 47 39.804 28.418 12.182 1.00371.94 C ATOM 377 CG LYS 47 39.396 29.887 12.210 1.00371.94 C ATOM 378 CD LYS 47 40.076 30.684 13.325 1.00371.94 C ATOM 379 CE LYS 47 41.543 31.014 13.036 1.00371.94 C ATOM 380 NZ LYS 47 42.086 31.903 14.087 1.00371.94 N ATOM 381 C LYS 47 37.833 27.203 12.993 1.00371.94 C ATOM 382 O LYS 47 37.125 27.949 12.318 1.00371.94 O ATOM 383 N LEU 48 37.372 26.062 13.546 1.00416.10 N ATOM 384 CA LEU 48 36.107 25.458 13.248 1.00416.10 C ATOM 385 CB LEU 48 35.993 24.058 13.884 1.00416.10 C ATOM 386 CG LEU 48 35.736 24.107 15.413 1.00416.10 C ATOM 387 CD1 LEU 48 35.873 22.736 16.078 1.00416.10 C ATOM 388 CD2 LEU 48 36.595 25.167 16.111 1.00416.10 C ATOM 389 C LEU 48 35.000 26.241 13.869 1.00416.10 C ATOM 390 O LEU 48 33.924 25.706 14.130 1.00416.10 O ATOM 391 N VAL 49 35.181 27.549 14.063 1.00308.32 N ATOM 392 CA VAL 49 34.071 28.255 14.599 1.00308.32 C ATOM 393 CB VAL 49 34.455 29.547 15.286 1.00308.32 C ATOM 394 CG1 VAL 49 33.200 30.251 15.837 1.00308.32 C ATOM 395 CG2 VAL 49 35.476 29.214 16.389 1.00308.32 C ATOM 396 C VAL 49 33.260 28.505 13.372 1.00308.32 C ATOM 397 O VAL 49 32.863 27.566 12.682 1.00308.32 O ATOM 398 N GLY 50 32.920 29.761 13.087 1.00298.27 N ATOM 399 CA GLY 50 32.142 30.063 11.933 1.00298.27 C ATOM 400 C GLY 50 32.897 29.894 10.658 1.00298.27 C ATOM 401 O GLY 50 32.341 29.407 9.673 1.00298.27 O ATOM 402 N LYS 51 34.185 30.297 10.623 1.00293.62 N ATOM 403 CA LYS 51 34.781 30.317 9.321 1.00293.62 C ATOM 404 CB LYS 51 35.647 31.556 9.038 1.00293.62 C ATOM 405 CG LYS 51 34.934 32.896 9.211 1.00293.62 C ATOM 406 CD LYS 51 34.804 33.313 10.673 1.00293.62 C ATOM 407 CE LYS 51 34.370 34.765 10.857 1.00293.62 C ATOM 408 NZ LYS 51 34.301 35.083 12.298 1.00293.62 N ATOM 409 C LYS 51 35.672 29.151 9.111 1.00293.62 C ATOM 410 O LYS 51 36.584 28.891 9.890 1.00293.62 O ATOM 411 N GLU 52 35.414 28.398 8.029 1.00306.91 N ATOM 412 CA GLU 52 36.347 27.375 7.691 1.00306.91 C ATOM 413 CB GLU 52 35.774 25.949 7.678 1.00306.91 C ATOM 414 CG GLU 52 34.320 25.886 7.249 1.00306.91 C ATOM 415 CD GLU 52 33.533 26.220 8.503 1.00306.91 C ATOM 416 OE1 GLU 52 34.157 26.254 9.595 1.00306.91 O ATOM 417 OE2 GLU 52 32.300 26.443 8.392 1.00306.91 O ATOM 418 C GLU 52 36.945 27.736 6.369 1.00306.91 C ATOM 419 O GLU 52 36.285 27.729 5.331 1.00306.91 O ATOM 420 N THR 53 38.239 28.108 6.394 1.00145.06 N ATOM 421 CA THR 53 38.923 28.430 5.181 1.00145.06 C ATOM 422 CB THR 53 39.404 29.850 5.120 1.00145.06 C ATOM 423 OG1 THR 53 38.311 30.747 5.243 1.00145.06 O ATOM 424 CG2 THR 53 40.120 30.069 3.777 1.00145.06 C ATOM 425 C THR 53 40.132 27.568 5.173 1.00145.06 C ATOM 426 O THR 53 40.752 27.384 6.202 1.00145.06 O ATOM 427 N PHE 54 40.508 26.990 4.020 1.00278.81 N ATOM 428 CA PHE 54 41.671 26.155 4.067 1.00278.81 C ATOM 429 CB PHE 54 41.383 24.693 3.709 1.00278.81 C ATOM 430 CG PHE 54 40.455 24.153 4.733 1.00278.81 C ATOM 431 CD1 PHE 54 39.145 24.567 4.750 1.00278.81 C ATOM 432 CD2 PHE 54 40.874 23.220 5.653 1.00278.81 C ATOM 433 CE1 PHE 54 38.269 24.074 5.687 1.00278.81 C ATOM 434 CE2 PHE 54 40.000 22.723 6.593 1.00278.81 C ATOM 435 CZ PHE 54 38.693 23.149 6.609 1.00278.81 C ATOM 436 C PHE 54 42.607 26.657 3.020 1.00278.81 C ATOM 437 O PHE 54 42.193 27.164 1.980 1.00278.81 O ATOM 438 N TYR 55 43.923 26.547 3.255 1.00256.43 N ATOM 439 CA TYR 55 44.760 27.029 2.203 1.00256.43 C ATOM 440 CB TYR 55 45.834 28.046 2.637 1.00256.43 C ATOM 441 CG TYR 55 45.133 29.223 3.225 1.00256.43 C ATOM 442 CD1 TYR 55 44.361 30.064 2.456 1.00256.43 C ATOM 443 CD2 TYR 55 45.274 29.503 4.561 1.00256.43 C ATOM 444 CE1 TYR 55 43.722 31.144 3.024 1.00256.43 C ATOM 445 CE2 TYR 55 44.642 30.579 5.135 1.00256.43 C ATOM 446 CZ TYR 55 43.858 31.402 4.366 1.00256.43 C ATOM 447 OH TYR 55 43.202 32.508 4.947 1.00256.43 O ATOM 448 C TYR 55 45.465 25.858 1.618 1.00256.43 C ATOM 449 O TYR 55 46.224 25.169 2.296 1.00256.43 O ATOM 450 N VAL 56 45.210 25.599 0.324 1.00150.65 N ATOM 451 CA VAL 56 45.883 24.533 -0.348 1.00150.65 C ATOM 452 CB VAL 56 45.044 23.957 -1.450 1.00150.65 C ATOM 453 CG1 VAL 56 45.826 22.826 -2.132 1.00150.65 C ATOM 454 CG2 VAL 56 43.698 23.511 -0.846 1.00150.65 C ATOM 455 C VAL 56 47.114 25.182 -0.910 1.00150.65 C ATOM 456 O VAL 56 47.029 26.134 -1.683 1.00150.65 O ATOM 457 N GLY 57 48.294 24.647 -0.539 1.00134.54 N ATOM 458 CA GLY 57 49.582 25.259 -0.752 1.00134.54 C ATOM 459 C GLY 57 49.965 25.504 -2.183 1.00134.54 C ATOM 460 O GLY 57 50.506 26.564 -2.495 1.00134.54 O ATOM 461 N ALA 58 49.733 24.561 -3.110 1.00323.99 N ATOM 462 CA ALA 58 50.242 24.813 -4.428 1.00323.99 C ATOM 463 CB ALA 58 50.091 23.627 -5.394 1.00323.99 C ATOM 464 C ALA 58 49.512 25.975 -5.009 1.00323.99 C ATOM 465 O ALA 58 48.308 26.152 -4.818 1.00323.99 O ATOM 466 N ALA 59 50.254 26.842 -5.720 1.00307.07 N ATOM 467 CA ALA 59 49.623 27.973 -6.321 1.00307.07 C ATOM 468 CB ALA 59 48.437 27.613 -7.235 1.00307.07 C ATOM 469 C ALA 59 49.149 28.848 -5.210 1.00307.07 C ATOM 470 O ALA 59 49.213 28.501 -4.033 1.00307.07 O ATOM 471 N LYS 60 48.697 30.058 -5.545 1.00257.05 N ATOM 472 CA LYS 60 48.195 30.853 -4.476 1.00257.05 C ATOM 473 CB LYS 60 48.318 32.349 -4.789 1.00257.05 C ATOM 474 CG LYS 60 48.226 33.262 -3.571 1.00257.05 C ATOM 475 CD LYS 60 49.457 33.172 -2.669 1.00257.05 C ATOM 476 CE LYS 60 49.529 34.288 -1.627 1.00257.05 C ATOM 477 NZ LYS 60 49.838 35.572 -2.294 1.00257.05 N ATOM 478 C LYS 60 46.743 30.529 -4.446 1.00257.05 C ATOM 479 O LYS 60 45.912 31.378 -4.757 1.00257.05 O ATOM 480 N THR 61 46.392 29.289 -4.050 1.00188.11 N ATOM 481 CA THR 61 45.002 28.954 -4.096 1.00188.11 C ATOM 482 CB THR 61 44.679 27.623 -4.711 1.00188.11 C ATOM 483 OG1 THR 61 45.341 26.585 -4.007 1.00188.11 O ATOM 484 CG2 THR 61 45.083 27.622 -6.190 1.00188.11 C ATOM 485 C THR 61 44.444 28.914 -2.721 1.00188.11 C ATOM 486 O THR 61 44.909 28.173 -1.857 1.00188.11 O ATOM 487 N LYS 62 43.407 29.738 -2.494 1.00132.69 N ATOM 488 CA LYS 62 42.734 29.721 -1.237 1.00132.69 C ATOM 489 CB LYS 62 42.235 31.102 -0.781 1.00132.69 C ATOM 490 CG LYS 62 43.360 32.089 -0.473 1.00132.69 C ATOM 491 CD LYS 62 42.876 33.516 -0.205 1.00132.69 C ATOM 492 CE LYS 62 42.418 34.267 -1.455 1.00132.69 C ATOM 493 NZ LYS 62 41.920 35.608 -1.079 1.00132.69 N ATOM 494 C LYS 62 41.529 28.880 -1.470 1.00132.69 C ATOM 495 O LYS 62 40.805 29.085 -2.442 1.00132.69 O ATOM 496 N ALA 63 41.291 27.899 -0.585 1.00108.53 N ATOM 497 CA ALA 63 40.176 27.017 -0.752 1.00108.53 C ATOM 498 CB ALA 63 40.572 25.532 -0.814 1.00108.53 C ATOM 499 C ALA 63 39.288 27.183 0.442 1.00108.53 C ATOM 500 O ALA 63 39.749 27.575 1.511 1.00108.53 O ATOM 501 N THR 64 37.969 26.953 0.270 1.00188.46 N ATOM 502 CA THR 64 37.063 27.028 1.386 1.00188.46 C ATOM 503 CB THR 64 36.267 28.303 1.421 1.00188.46 C ATOM 504 OG1 THR 64 37.126 29.429 1.483 1.00188.46 O ATOM 505 CG2 THR 64 35.354 28.279 2.654 1.00188.46 C ATOM 506 C THR 64 36.034 25.927 1.234 1.00188.46 C ATOM 507 O THR 64 35.499 25.754 0.141 1.00188.46 O ATOM 508 N ILE 65 35.786 25.112 2.298 1.00496.48 N ATOM 509 CA ILE 65 34.769 24.065 2.348 1.00496.48 C ATOM 510 CB ILE 65 35.096 22.846 3.185 1.00496.48 C ATOM 511 CG2 ILE 65 33.957 21.824 3.057 1.00496.48 C ATOM 512 CG1 ILE 65 36.345 22.153 2.635 1.00496.48 C ATOM 513 CD1 ILE 65 37.622 22.937 2.826 1.00496.48 C ATOM 514 C ILE 65 33.346 24.560 2.610 1.00496.48 C ATOM 515 O ILE 65 32.370 23.884 2.287 1.00496.48 O ATOM 516 N ASN 66 33.179 25.685 3.329 1.00320.44 N ATOM 517 CA ASN 66 31.904 26.339 3.531 1.00320.44 C ATOM 518 CB ASN 66 31.439 27.051 2.241 1.00320.44 C ATOM 519 CG ASN 66 30.348 28.066 2.536 1.00320.44 C ATOM 520 OD1 ASN 66 29.801 28.130 3.635 1.00320.44 O ATOM 521 ND2 ASN 66 30.012 28.891 1.509 1.00320.44 N ATOM 522 C ASN 66 30.828 25.390 3.972 1.00320.44 C ATOM 523 O ASN 66 29.882 25.141 3.227 1.00320.44 O ATOM 524 N ILE 67 30.933 24.837 5.201 1.00374.15 N ATOM 525 CA ILE 67 29.921 23.933 5.670 1.00374.15 C ATOM 526 CB ILE 67 30.410 22.740 6.441 1.00374.15 C ATOM 527 CG2 ILE 67 29.185 21.968 6.951 1.00374.15 C ATOM 528 CG1 ILE 67 31.386 21.893 5.636 1.00374.15 C ATOM 529 CD1 ILE 67 32.793 22.457 5.672 1.00374.15 C ATOM 530 C ILE 67 29.107 24.637 6.690 1.00374.15 C ATOM 531 O ILE 67 29.620 25.326 7.574 1.00374.15 O ATOM 532 N ASP 68 27.779 24.498 6.576 1.00319.59 N ATOM 533 CA ASP 68 27.017 25.071 7.628 1.00319.59 C ATOM 534 CB ASP 68 26.031 26.202 7.229 1.00319.59 C ATOM 535 CG ASP 68 24.878 25.725 6.354 1.00319.59 C ATOM 536 OD1 ASP 68 25.045 24.716 5.620 1.00319.59 O ATOM 537 OD2 ASP 68 23.806 26.386 6.406 1.00319.59 O ATOM 538 C ASP 68 26.288 23.959 8.285 1.00319.59 C ATOM 539 O ASP 68 25.412 23.322 7.703 1.00319.59 O ATOM 540 N ALA 69 26.695 23.652 9.524 1.00191.03 N ATOM 541 CA ALA 69 26.010 22.629 10.240 1.00191.03 C ATOM 542 CB ALA 69 26.946 21.736 11.071 1.00191.03 C ATOM 543 C ALA 69 25.157 23.374 11.197 1.00191.03 C ATOM 544 O ALA 69 25.642 24.132 12.034 1.00191.03 O ATOM 545 N ILE 70 23.838 23.204 11.067 1.00291.98 N ATOM 546 CA ILE 70 22.972 23.831 12.004 1.00291.98 C ATOM 547 CB ILE 70 22.091 24.910 11.425 1.00291.98 C ATOM 548 CG2 ILE 70 22.968 26.139 11.148 1.00291.98 C ATOM 549 CG1 ILE 70 21.282 24.418 10.212 1.00291.98 C ATOM 550 CD1 ILE 70 20.132 23.476 10.550 1.00291.98 C ATOM 551 C ILE 70 22.159 22.749 12.617 1.00291.98 C ATOM 552 O ILE 70 21.786 21.791 11.943 1.00291.98 O ATOM 553 N SER 71 21.944 22.855 13.944 1.00228.40 N ATOM 554 CA SER 71 21.196 21.891 14.694 1.00228.40 C ATOM 555 CB SER 71 20.021 21.227 13.952 1.00228.40 C ATOM 556 OG SER 71 19.006 22.188 13.697 1.00228.40 O ATOM 557 C SER 71 22.153 20.857 15.163 1.00228.40 C ATOM 558 O SER 71 23.363 21.074 15.173 1.00228.40 O ATOM 559 N GLY 72 21.635 19.717 15.646 1.00168.93 N ATOM 560 CA GLY 72 22.572 18.738 16.090 1.00168.93 C ATOM 561 C GLY 72 23.357 18.238 14.922 1.00168.93 C ATOM 562 O GLY 72 24.583 18.318 14.917 1.00168.93 O ATOM 563 N PHE 73 22.676 17.737 13.869 1.00364.88 N ATOM 564 CA PHE 73 23.460 17.222 12.785 1.00364.88 C ATOM 565 CB PHE 73 23.539 15.684 12.734 1.00364.88 C ATOM 566 CG PHE 73 24.249 15.125 13.921 1.00364.88 C ATOM 567 CD1 PHE 73 25.613 14.942 13.901 1.00364.88 C ATOM 568 CD2 PHE 73 23.550 14.768 15.052 1.00364.88 C ATOM 569 CE1 PHE 73 26.268 14.418 14.992 1.00364.88 C ATOM 570 CE2 PHE 73 24.199 14.244 16.146 1.00364.88 C ATOM 571 CZ PHE 73 25.563 14.066 16.117 1.00364.88 C ATOM 572 C PHE 73 22.830 17.580 11.478 1.00364.88 C ATOM 573 O PHE 73 21.956 16.870 10.984 1.00364.88 O ATOM 574 N ALA 74 23.276 18.682 10.859 1.00179.13 N ATOM 575 CA ALA 74 22.835 18.978 9.528 1.00179.13 C ATOM 576 CB ALA 74 21.870 20.173 9.437 1.00179.13 C ATOM 577 C ALA 74 24.088 19.381 8.839 1.00179.13 C ATOM 578 O ALA 74 24.816 20.229 9.349 1.00179.13 O ATOM 579 N TYR 75 24.392 18.782 7.675 1.00454.19 N ATOM 580 CA TYR 75 25.658 19.122 7.103 1.00454.19 C ATOM 581 CB TYR 75 26.727 18.083 7.480 1.00454.19 C ATOM 582 CG TYR 75 26.099 16.746 7.263 1.00454.19 C ATOM 583 CD1 TYR 75 25.352 16.179 8.269 1.00454.19 C ATOM 584 CD2 TYR 75 26.230 16.067 6.074 1.00454.19 C ATOM 585 CE1 TYR 75 24.754 14.953 8.102 1.00454.19 C ATOM 586 CE2 TYR 75 25.635 14.841 5.901 1.00454.19 C ATOM 587 CZ TYR 75 24.897 14.281 6.915 1.00454.19 C ATOM 588 OH TYR 75 24.287 13.023 6.735 1.00454.19 O ATOM 589 C TYR 75 25.590 19.235 5.616 1.00454.19 C ATOM 590 O TYR 75 25.190 18.312 4.912 1.00454.19 O ATOM 591 N GLU 76 25.988 20.393 5.073 1.00297.09 N ATOM 592 CA GLU 76 26.096 20.408 3.649 1.00297.09 C ATOM 593 CB GLU 76 25.095 21.295 2.890 1.00297.09 C ATOM 594 CG GLU 76 25.320 22.801 2.968 1.00297.09 C ATOM 595 CD GLU 76 24.376 23.392 1.931 1.00297.09 C ATOM 596 OE1 GLU 76 23.551 22.610 1.385 1.00297.09 O ATOM 597 OE2 GLU 76 24.465 24.620 1.665 1.00297.09 O ATOM 598 C GLU 76 27.476 20.912 3.409 1.00297.09 C ATOM 599 O GLU 76 27.912 21.850 4.075 1.00297.09 O ATOM 600 N TYR 77 28.213 20.285 2.473 1.00448.17 N ATOM 601 CA TYR 77 29.577 20.678 2.289 1.00448.17 C ATOM 602 CB TYR 77 30.567 19.516 2.389 1.00448.17 C ATOM 603 CG TYR 77 30.286 18.709 3.594 1.00448.17 C ATOM 604 CD1 TYR 77 30.322 19.293 4.827 1.00448.17 C ATOM 605 CD2 TYR 77 29.940 17.384 3.489 1.00448.17 C ATOM 606 CE1 TYR 77 30.060 18.572 5.956 1.00448.17 C ATOM 607 CE2 TYR 77 29.680 16.646 4.617 1.00448.17 C ATOM 608 CZ TYR 77 29.745 17.245 5.849 1.00448.17 C ATOM 609 OH TYR 77 29.478 16.512 7.015 1.00448.17 O ATOM 610 C TYR 77 29.750 21.162 0.884 1.00448.17 C ATOM 611 O TYR 77 29.331 20.495 -0.059 1.00448.17 O ATOM 612 N THR 78 30.367 22.347 0.694 1.00256.34 N ATOM 613 CA THR 78 30.608 22.779 -0.658 1.00256.34 C ATOM 614 CB THR 78 29.760 23.934 -1.113 1.00256.34 C ATOM 615 OG1 THR 78 29.888 25.018 -0.206 1.00256.34 O ATOM 616 CG2 THR 78 28.297 23.500 -1.249 1.00256.34 C ATOM 617 C THR 78 32.018 23.259 -0.787 1.00256.34 C ATOM 618 O THR 78 32.392 24.258 -0.182 1.00256.34 O ATOM 619 N LEU 79 32.843 22.597 -1.621 1.00230.38 N ATOM 620 CA LEU 79 34.185 23.089 -1.722 1.00230.38 C ATOM 621 CB LEU 79 35.224 22.010 -2.085 1.00230.38 C ATOM 622 CG LEU 79 36.688 22.483 -2.008 1.00230.38 C ATOM 623 CD1 LEU 79 37.659 21.302 -2.082 1.00230.38 C ATOM 624 CD2 LEU 79 37.009 23.501 -3.101 1.00230.38 C ATOM 625 C LEU 79 34.174 24.197 -2.724 1.00230.38 C ATOM 626 O LEU 79 33.498 24.123 -3.748 1.00230.38 O ATOM 627 N GLU 80 34.910 25.284 -2.426 1.00197.02 N ATOM 628 CA GLU 80 34.910 26.405 -3.311 1.00197.02 C ATOM 629 CB GLU 80 34.155 27.593 -2.692 1.00197.02 C ATOM 630 CG GLU 80 33.674 28.653 -3.678 1.00197.02 C ATOM 631 CD GLU 80 32.609 29.463 -2.952 1.00197.02 C ATOM 632 OE1 GLU 80 31.484 28.924 -2.770 1.00197.02 O ATOM 633 OE2 GLU 80 32.905 30.621 -2.558 1.00197.02 O ATOM 634 C GLU 80 36.340 26.788 -3.509 1.00197.02 C ATOM 635 O GLU 80 37.043 27.105 -2.550 1.00197.02 O ATOM 636 N ILE 81 36.818 26.757 -4.767 1.00116.39 N ATOM 637 CA ILE 81 38.190 27.093 -4.985 1.00116.39 C ATOM 638 CB ILE 81 39.034 25.979 -5.529 1.00116.39 C ATOM 639 CG2 ILE 81 40.353 26.579 -6.046 1.00116.39 C ATOM 640 CG1 ILE 81 39.221 24.888 -4.469 1.00116.39 C ATOM 641 CD1 ILE 81 39.899 23.633 -5.008 1.00116.39 C ATOM 642 C ILE 81 38.289 28.197 -5.962 1.00116.39 C ATOM 643 O ILE 81 37.657 28.191 -7.016 1.00116.39 O ATOM 644 N ASN 82 39.103 29.193 -5.591 1.00134.02 N ATOM 645 CA ASN 82 39.405 30.279 -6.455 1.00134.02 C ATOM 646 CB ASN 82 40.239 29.825 -7.664 1.00134.02 C ATOM 647 CG ASN 82 41.061 31.005 -8.145 1.00134.02 C ATOM 648 OD1 ASN 82 40.858 32.139 -7.718 1.00134.02 O ATOM 649 ND2 ASN 82 42.034 30.726 -9.054 1.00134.02 N ATOM 650 C ASN 82 38.128 30.896 -6.930 1.00134.02 C ATOM 651 O ASN 82 38.040 31.359 -8.064 1.00134.02 O ATOM 652 N GLY 83 37.095 30.919 -6.064 1.00 54.42 N ATOM 653 CA GLY 83 35.889 31.613 -6.415 1.00 54.42 C ATOM 654 C GLY 83 34.912 30.754 -7.157 1.00 54.42 C ATOM 655 O GLY 83 33.913 31.270 -7.655 1.00 54.42 O ATOM 656 N LYS 84 35.133 29.435 -7.288 1.00133.66 N ATOM 657 CA LYS 84 34.079 28.744 -7.974 1.00133.66 C ATOM 658 CB LYS 84 34.433 28.276 -9.397 1.00133.66 C ATOM 659 CG LYS 84 35.585 27.282 -9.497 1.00133.66 C ATOM 660 CD LYS 84 35.687 26.658 -10.890 1.00133.66 C ATOM 661 CE LYS 84 36.891 25.734 -11.069 1.00133.66 C ATOM 662 NZ LYS 84 36.862 25.130 -12.420 1.00133.66 N ATOM 663 C LYS 84 33.621 27.579 -7.164 1.00133.66 C ATOM 664 O LYS 84 34.409 26.918 -6.488 1.00133.66 O ATOM 665 N SER 85 32.298 27.317 -7.195 1.00129.71 N ATOM 666 CA SER 85 31.782 26.220 -6.432 1.00129.71 C ATOM 667 CB SER 85 30.251 26.204 -6.276 1.00129.71 C ATOM 668 OG SER 85 29.816 27.279 -5.460 1.00129.71 O ATOM 669 C SER 85 32.135 24.962 -7.145 1.00129.71 C ATOM 670 O SER 85 32.062 24.876 -8.368 1.00129.71 O ATOM 671 N LEU 86 32.527 23.939 -6.371 1.00129.94 N ATOM 672 CA LEU 86 32.827 22.665 -6.937 1.00129.94 C ATOM 673 CB LEU 86 34.052 21.989 -6.310 1.00129.94 C ATOM 674 CG LEU 86 35.333 22.824 -6.447 1.00129.94 C ATOM 675 CD1 LEU 86 36.548 22.081 -5.882 1.00129.94 C ATOM 676 CD2 LEU 86 35.545 23.288 -7.892 1.00129.94 C ATOM 677 C LEU 86 31.649 21.837 -6.572 1.00129.94 C ATOM 678 O LEU 86 31.234 21.823 -5.415 1.00129.94 O ATOM 679 N LYS 87 31.070 21.116 -7.545 1.00276.60 N ATOM 680 CA LYS 87 29.874 20.425 -7.186 1.00276.60 C ATOM 681 CB LYS 87 29.041 19.858 -8.361 1.00276.60 C ATOM 682 CG LYS 87 29.755 18.900 -9.319 1.00276.60 C ATOM 683 CD LYS 87 30.741 19.567 -10.281 1.00276.60 C ATOM 684 CE LYS 87 30.113 19.940 -11.627 1.00276.60 C ATOM 685 NZ LYS 87 29.372 21.216 -11.510 1.00276.60 N ATOM 686 C LYS 87 30.176 19.334 -6.216 1.00276.60 C ATOM 687 O LYS 87 31.210 18.667 -6.278 1.00276.60 O ATOM 688 N LYS 88 29.252 19.166 -5.252 1.00291.08 N ATOM 689 CA LYS 88 29.368 18.129 -4.281 1.00291.08 C ATOM 690 CB LYS 88 28.165 18.112 -3.321 1.00291.08 C ATOM 691 CG LYS 88 28.194 17.032 -2.241 1.00291.08 C ATOM 692 CD LYS 88 27.212 17.316 -1.100 1.00291.08 C ATOM 693 CE LYS 88 25.848 17.824 -1.576 1.00291.08 C ATOM 694 NZ LYS 88 24.992 18.158 -0.414 1.00291.08 N ATOM 695 C LYS 88 29.360 16.884 -5.090 1.00291.08 C ATOM 696 O LYS 88 28.458 16.649 -5.891 1.00291.08 O ATOM 697 N TYR 89 30.386 16.048 -4.911 1.00223.10 N ATOM 698 CA TYR 89 30.445 14.893 -5.739 1.00223.10 C ATOM 699 CB TYR 89 31.860 14.724 -6.316 1.00223.10 C ATOM 700 CG TYR 89 31.823 13.901 -7.551 1.00223.10 C ATOM 701 CD1 TYR 89 31.410 14.479 -8.729 1.00223.10 C ATOM 702 CD2 TYR 89 32.220 12.585 -7.552 1.00223.10 C ATOM 703 CE1 TYR 89 31.374 13.755 -9.894 1.00223.10 C ATOM 704 CE2 TYR 89 32.186 11.856 -8.716 1.00223.10 C ATOM 705 CZ TYR 89 31.763 12.439 -9.886 1.00223.10 C ATOM 706 OH TYR 89 31.731 11.690 -11.079 1.00223.10 O ATOM 707 C TYR 89 30.164 13.760 -4.812 1.00223.10 C ATOM 708 O TYR 89 30.959 13.455 -3.929 1.00223.10 O ATOM 709 N MET 90 28.996 13.114 -4.966 1.00175.48 N ATOM 710 CA MET 90 28.708 12.035 -4.074 1.00175.48 C ATOM 711 CB MET 90 27.651 12.376 -3.001 1.00175.48 C ATOM 712 CG MET 90 26.266 12.721 -3.555 1.00175.48 C ATOM 713 SD MET 90 24.948 12.800 -2.303 1.00175.48 S ATOM 714 CE MET 90 25.518 14.343 -1.539 1.00175.48 C ATOM 715 C MET 90 28.177 10.866 -4.902 1.00175.48 C ATOM 716 O MET 90 28.827 10.515 -5.924 1.00175.48 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 64.81 62.9 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 48.40 72.9 118 100.0 118 ARMSMC SURFACE . . . . . . . . 73.95 51.9 108 100.0 108 ARMSMC BURIED . . . . . . . . 47.38 80.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.48 42.7 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 87.38 40.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 78.44 51.9 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 93.32 31.8 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 75.72 58.1 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.79 43.6 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 74.77 45.7 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 80.47 41.0 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 85.19 36.4 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 70.91 54.5 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.27 41.7 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 76.27 41.7 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 68.81 41.2 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 80.38 38.9 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 62.31 50.0 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.09 38.5 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 80.09 38.5 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 83.66 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 84.80 36.4 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 46.21 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.22 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.22 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0469 CRMSCA SECONDARY STRUCTURE . . 2.42 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.00 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.56 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.27 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 2.57 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.04 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.65 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.32 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.49 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.03 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.75 204 100.0 204 CRMSSC BURIED . . . . . . . . 3.61 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.33 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.38 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.41 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.18 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 252.786 0.972 0.973 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 240.820 0.980 0.980 59 100.0 59 ERRCA SURFACE . . . . . . . . 236.377 0.966 0.967 55 100.0 55 ERRCA BURIED . . . . . . . . 278.571 0.982 0.982 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 254.314 0.972 0.973 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 241.128 0.979 0.979 293 100.0 293 ERRMC SURFACE . . . . . . . . 238.799 0.966 0.967 269 100.0 269 ERRMC BURIED . . . . . . . . 278.437 0.981 0.982 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 283.369 0.966 0.967 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 290.107 0.966 0.967 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 266.467 0.974 0.974 252 100.0 252 ERRSC SURFACE . . . . . . . . 269.203 0.956 0.958 204 100.0 204 ERRSC BURIED . . . . . . . . 302.381 0.978 0.979 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 268.018 0.969 0.970 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 254.034 0.977 0.977 488 100.0 488 ERRALL SURFACE . . . . . . . . 252.228 0.962 0.963 424 100.0 424 ERRALL BURIED . . . . . . . . 290.944 0.980 0.980 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 8 40 55 72 88 90 90 DISTCA CA (P) 8.89 44.44 61.11 80.00 97.78 90 DISTCA CA (RMS) 0.74 1.32 1.71 2.42 3.83 DISTCA ALL (N) 44 267 387 525 665 716 716 DISTALL ALL (P) 6.15 37.29 54.05 73.32 92.88 716 DISTALL ALL (RMS) 0.75 1.40 1.82 2.56 3.99 DISTALL END of the results output