####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS096_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS096_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.40 4.40 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 2 - 24 1.85 7.44 LONGEST_CONTINUOUS_SEGMENT: 23 3 - 25 1.97 7.85 LCS_AVERAGE: 19.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 6 - 21 0.91 6.03 LCS_AVERAGE: 10.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 90 3 3 3 4 6 8 12 12 17 22 23 25 41 44 70 74 77 81 84 86 LCS_GDT T 2 T 2 3 23 90 3 4 12 18 20 24 46 55 66 70 72 74 79 82 85 86 87 88 89 89 LCS_GDT D 3 D 3 4 23 90 3 4 11 21 26 50 58 65 68 71 73 78 80 83 85 86 87 88 89 89 LCS_GDT L 4 L 4 4 23 90 3 4 8 14 26 42 58 61 68 71 73 78 80 83 85 86 87 88 89 89 LCS_GDT V 5 V 5 12 23 90 6 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 6 A 6 16 23 90 4 12 23 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 7 V 7 16 23 90 4 12 23 32 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT W 8 W 8 16 23 90 4 14 23 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT D 9 D 9 16 23 90 4 12 23 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 10 V 10 16 23 90 4 12 19 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 11 A 11 16 23 90 4 12 19 32 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT L 12 L 12 16 23 90 6 12 19 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT S 13 S 13 16 23 90 3 12 19 30 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT D 14 D 14 16 23 90 3 14 27 33 43 56 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 15 G 15 16 23 90 3 14 27 33 46 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 16 V 16 16 23 90 4 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT H 17 H 17 16 23 90 7 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 18 K 18 16 23 90 7 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 19 I 19 16 23 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 20 E 20 16 23 90 4 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT F 21 F 21 16 23 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 22 E 22 9 23 90 4 9 24 31 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT H 23 H 23 9 23 90 4 14 24 31 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 24 G 24 7 23 90 3 6 11 24 36 44 55 64 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 25 T 25 3 23 90 3 4 6 10 24 36 49 61 68 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 26 T 26 3 5 90 3 3 3 4 5 16 22 44 63 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT S 27 S 27 6 16 90 3 6 21 33 44 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 28 G 28 10 16 90 3 12 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 29 K 29 13 16 90 3 9 15 28 40 51 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT R 30 R 30 13 16 90 4 11 14 24 39 55 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 31 V 31 13 16 90 4 11 15 24 40 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 32 V 32 13 16 90 4 11 17 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT Y 33 Y 33 13 16 90 4 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 34 V 34 13 16 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT D 35 D 35 13 16 90 4 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 36 G 36 13 16 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 37 K 37 13 16 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 38 E 38 13 16 90 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 39 E 39 13 16 90 3 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 40 I 40 13 16 90 3 11 25 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT R 41 R 41 13 16 90 3 11 17 32 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 42 K 42 3 16 90 3 6 21 32 42 53 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 43 E 43 3 4 90 3 3 4 4 4 9 10 25 37 49 64 73 79 83 85 86 87 88 89 89 LCS_GDT W 44 W 44 3 4 90 3 3 4 4 4 4 9 16 19 24 35 56 63 74 80 85 86 88 89 89 LCS_GDT M 45 M 45 3 7 90 3 3 4 7 8 13 24 40 52 64 74 78 80 83 85 86 87 88 89 89 LCS_GDT F 46 F 46 3 7 90 3 3 4 7 8 10 13 22 39 52 63 74 80 83 85 86 87 88 89 89 LCS_GDT K 47 K 47 4 7 90 3 3 4 7 8 10 23 42 48 55 66 75 80 83 85 86 87 88 89 89 LCS_GDT L 48 L 48 4 7 90 3 3 4 15 22 40 48 59 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 49 V 49 4 10 90 3 4 4 8 19 31 42 56 67 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 50 G 50 5 20 90 3 4 6 17 28 49 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 51 K 51 6 20 90 4 8 12 30 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 52 E 52 6 20 90 6 10 15 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 53 T 53 6 20 90 6 10 15 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT F 54 F 54 6 20 90 4 6 11 30 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT Y 55 Y 55 6 20 90 3 10 15 30 45 55 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT V 56 V 56 6 20 90 6 10 15 30 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 57 G 57 5 20 90 3 5 11 19 23 35 55 63 68 73 76 77 80 82 85 86 87 88 89 89 LCS_GDT A 58 A 58 3 20 90 3 6 12 30 45 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 59 A 59 4 20 90 5 14 24 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 60 K 60 4 20 90 3 5 9 19 27 44 57 64 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 61 T 61 8 20 90 6 14 24 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 62 K 62 8 20 90 5 14 24 30 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 63 A 63 8 20 90 6 15 24 32 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 64 T 64 8 20 90 3 13 24 32 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 65 I 65 8 20 90 8 15 24 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT N 66 N 66 8 20 90 8 15 24 32 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 67 I 67 8 20 90 3 11 24 31 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT D 68 D 68 8 20 90 3 9 20 28 42 55 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 69 A 69 6 20 90 3 4 6 14 26 40 54 64 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 70 I 70 4 13 90 3 4 10 13 19 23 29 49 62 69 76 77 79 83 85 86 87 88 89 89 LCS_GDT S 71 S 71 4 13 90 3 4 8 9 11 23 29 33 49 62 70 76 79 81 85 86 87 88 89 89 LCS_GDT G 72 G 72 7 16 90 3 7 9 10 13 31 51 61 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT F 73 F 73 7 16 90 3 7 9 11 16 39 54 64 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT A 74 A 74 13 16 90 3 7 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT Y 75 Y 75 13 16 90 5 9 16 27 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 76 E 76 13 16 90 4 10 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT Y 77 Y 77 13 16 90 3 10 25 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT T 78 T 78 13 16 90 5 13 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT L 79 L 79 13 16 90 4 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT E 80 E 80 13 16 90 6 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT I 81 I 81 13 16 90 7 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT N 82 N 82 13 16 90 7 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT G 83 G 83 13 16 90 5 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 84 K 84 13 16 90 5 12 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT S 85 S 85 13 16 90 7 14 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT L 86 L 86 13 16 90 0 5 15 24 35 50 62 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 87 K 87 3 16 90 0 3 4 11 26 41 54 66 70 73 76 78 80 83 85 86 87 88 89 89 LCS_GDT K 88 K 88 3 16 90 0 3 14 14 23 34 46 59 65 69 72 78 80 83 85 86 87 88 89 89 LCS_GDT Y 89 Y 89 3 4 90 0 3 3 6 10 11 12 16 35 62 71 75 76 82 83 86 86 88 89 89 LCS_GDT M 90 M 90 3 4 90 0 3 3 4 6 7 7 27 55 65 71 76 79 82 84 86 87 88 89 89 LCS_AVERAGE LCS_A: 43.30 ( 10.56 19.36 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 15 27 33 47 57 62 66 70 73 76 78 80 83 85 86 87 88 89 89 GDT PERCENT_AT 8.89 16.67 30.00 36.67 52.22 63.33 68.89 73.33 77.78 81.11 84.44 86.67 88.89 92.22 94.44 95.56 96.67 97.78 98.89 98.89 GDT RMS_LOCAL 0.37 0.61 1.06 1.27 1.84 2.05 2.18 2.33 2.57 2.88 3.01 3.15 3.27 3.63 3.75 3.83 3.93 4.04 4.16 4.16 GDT RMS_ALL_AT 4.92 4.83 4.52 4.50 4.60 4.61 4.59 4.55 4.54 4.47 4.48 4.45 4.45 4.42 4.41 4.40 4.41 4.41 4.41 4.41 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: E 38 E 38 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: D 68 D 68 # possible swapping detected: F 73 F 73 # possible swapping detected: E 76 E 76 # possible swapping detected: E 80 E 80 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 13.261 0 0.539 1.290 19.289 0.357 0.179 LGA T 2 T 2 6.884 0 0.091 0.976 9.748 24.524 16.122 LGA D 3 D 3 4.978 0 0.671 0.852 6.175 24.048 32.917 LGA L 4 L 4 5.274 0 0.158 1.074 11.743 43.571 23.214 LGA V 5 V 5 0.735 0 0.659 0.564 5.264 84.048 62.449 LGA A 6 A 6 2.230 0 0.083 0.104 2.739 70.952 68.190 LGA V 7 V 7 2.565 0 0.071 1.109 5.022 55.357 47.007 LGA W 8 W 8 1.758 0 0.066 0.284 2.509 72.857 71.224 LGA D 9 D 9 1.901 0 0.073 0.895 3.632 66.905 60.357 LGA V 10 V 10 2.291 0 0.271 1.244 3.186 62.857 59.456 LGA A 11 A 11 1.894 0 0.045 0.062 2.358 68.810 69.619 LGA L 12 L 12 2.318 0 0.190 0.324 3.265 66.786 60.179 LGA S 13 S 13 2.919 0 0.646 0.735 4.786 48.929 53.095 LGA D 14 D 14 3.002 0 0.185 1.257 7.042 57.262 41.250 LGA G 15 G 15 2.195 0 0.075 0.075 2.344 70.952 70.952 LGA V 16 V 16 1.522 0 0.158 1.157 4.116 68.929 63.265 LGA H 17 H 17 0.775 0 0.102 1.104 3.123 90.476 79.524 LGA K 18 K 18 0.928 0 0.019 0.916 4.610 85.952 70.000 LGA I 19 I 19 0.423 0 0.688 0.748 2.559 86.905 86.667 LGA E 20 E 20 1.351 0 0.214 0.749 6.047 71.071 52.646 LGA F 21 F 21 1.348 0 0.056 0.858 2.684 79.405 74.762 LGA E 22 E 22 2.664 0 0.096 1.163 3.120 57.262 68.254 LGA H 23 H 23 2.862 0 0.632 1.122 4.728 51.905 45.714 LGA G 24 G 24 5.351 0 0.445 0.445 6.407 24.048 24.048 LGA T 25 T 25 7.184 0 0.433 1.352 11.005 10.000 6.327 LGA T 26 T 26 7.367 0 0.568 0.777 11.399 16.429 9.592 LGA S 27 S 27 2.716 0 0.549 0.668 4.090 52.143 56.349 LGA G 28 G 28 2.207 0 0.140 0.140 2.609 60.952 60.952 LGA K 29 K 29 3.436 0 0.087 0.994 6.621 55.476 45.450 LGA R 30 R 30 3.329 0 0.100 0.793 3.683 48.333 50.779 LGA V 31 V 31 2.853 0 0.157 0.282 3.198 59.167 57.279 LGA V 32 V 32 2.312 0 0.040 0.099 3.196 66.905 62.789 LGA Y 33 Y 33 1.179 0 0.157 0.394 1.808 77.143 80.833 LGA V 34 V 34 0.816 0 0.037 1.101 3.307 92.857 83.537 LGA D 35 D 35 0.715 0 0.057 0.957 3.424 90.476 77.143 LGA G 36 G 36 1.014 0 0.110 0.110 1.442 83.690 83.690 LGA K 37 K 37 0.858 0 0.059 1.424 7.727 88.214 61.799 LGA E 38 E 38 1.086 0 0.545 0.859 2.820 77.619 74.233 LGA E 39 E 39 1.516 0 0.209 0.911 2.609 77.143 77.884 LGA I 40 I 40 2.153 0 0.692 0.887 4.656 61.429 53.452 LGA R 41 R 41 2.563 0 0.606 0.607 3.982 60.952 53.463 LGA K 42 K 42 3.874 0 0.629 1.141 10.558 35.238 20.476 LGA E 43 E 43 9.556 0 0.118 0.602 15.087 2.619 1.164 LGA W 44 W 44 11.117 0 0.656 0.663 20.039 1.071 0.306 LGA M 45 M 45 7.285 0 0.591 1.273 8.671 7.500 18.929 LGA F 46 F 46 9.846 0 0.025 1.388 11.961 0.714 0.260 LGA K 47 K 47 9.409 0 0.658 1.306 9.902 5.000 2.804 LGA L 48 L 48 6.277 0 0.087 1.028 8.513 21.905 15.119 LGA V 49 V 49 6.667 0 0.619 1.058 10.813 25.357 15.918 LGA G 50 G 50 3.771 0 0.171 0.171 5.116 39.167 39.167 LGA K 51 K 51 2.777 0 0.079 1.175 10.338 60.952 40.688 LGA E 52 E 52 2.579 0 0.113 1.303 6.888 57.143 46.561 LGA T 53 T 53 2.695 0 0.232 0.288 2.695 59.048 58.231 LGA F 54 F 54 3.215 0 0.148 1.173 5.767 51.786 44.242 LGA Y 55 Y 55 3.342 0 0.103 1.378 4.983 48.333 59.246 LGA V 56 V 56 2.780 0 0.077 0.086 3.739 50.238 58.844 LGA G 57 G 57 5.439 0 0.587 0.587 5.439 35.952 35.952 LGA A 58 A 58 3.215 0 0.058 0.054 4.168 53.810 50.476 LGA A 59 A 59 2.561 0 0.689 0.666 3.146 57.262 58.762 LGA K 60 K 60 4.784 0 0.236 0.357 8.647 37.262 21.217 LGA T 61 T 61 2.506 0 0.038 1.060 3.710 59.167 62.177 LGA K 62 K 62 2.336 0 0.207 1.281 3.858 59.167 57.407 LGA A 63 A 63 1.771 0 0.039 0.056 2.039 72.857 71.238 LGA T 64 T 64 1.807 0 0.585 0.512 3.363 67.143 66.122 LGA I 65 I 65 1.209 0 0.701 0.936 3.896 69.762 67.619 LGA N 66 N 66 1.856 0 0.505 1.547 5.148 70.833 58.690 LGA I 67 I 67 2.471 0 0.112 0.180 4.298 59.048 54.762 LGA D 68 D 68 3.378 0 0.565 1.032 5.452 42.619 41.429 LGA A 69 A 69 6.044 0 0.556 0.562 9.771 12.738 11.619 LGA I 70 I 70 8.883 0 0.252 0.358 10.454 8.095 4.702 LGA S 71 S 71 11.187 0 0.476 0.969 13.563 0.714 0.476 LGA G 72 G 72 7.427 0 0.647 0.647 8.844 10.833 10.833 LGA F 73 F 73 5.470 0 0.185 0.510 10.033 29.048 14.286 LGA A 74 A 74 2.155 0 0.282 0.347 3.685 57.500 54.667 LGA Y 75 Y 75 2.741 0 0.064 1.329 10.590 68.929 30.714 LGA E 76 E 76 1.881 0 0.109 0.964 4.245 66.905 57.884 LGA Y 77 Y 77 1.862 0 0.053 0.371 6.540 72.857 47.063 LGA T 78 T 78 1.828 0 0.065 1.055 4.121 72.857 67.755 LGA L 79 L 79 1.840 0 0.082 0.384 2.559 66.905 67.857 LGA E 80 E 80 1.663 0 0.085 1.219 3.407 72.857 66.878 LGA I 81 I 81 1.558 0 0.090 0.660 1.987 72.857 75.000 LGA N 82 N 82 1.667 0 0.077 0.099 1.743 72.857 73.929 LGA G 83 G 83 1.740 0 0.091 0.091 1.920 72.857 72.857 LGA K 84 K 84 2.097 0 0.117 1.008 7.357 70.952 49.683 LGA S 85 S 85 1.194 0 0.366 0.690 2.000 81.548 78.651 LGA L 86 L 86 3.738 0 0.607 1.443 8.672 46.786 33.214 LGA K 87 K 87 4.345 0 0.629 1.017 5.723 41.905 33.915 LGA K 88 K 88 6.091 0 0.655 1.072 11.553 17.500 9.471 LGA Y 89 Y 89 8.964 0 0.162 1.079 13.637 6.786 2.262 LGA M 90 M 90 7.633 0 0.652 0.580 11.716 7.262 4.583 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.400 4.267 5.496 52.173 47.031 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 66 2.33 55.556 51.228 2.714 LGA_LOCAL RMSD: 2.332 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.547 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.400 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.028141 * X + 0.994981 * Y + -0.096028 * Z + -2.769316 Y_new = 0.736174 * X + 0.085616 * Y + 0.671355 * Z + -57.792614 Z_new = 0.676207 * X + -0.051801 * Y + -0.734888 * Z + 4.813308 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.609004 -0.742602 -3.071221 [DEG: 92.1891 -42.5480 -175.9680 ] ZXZ: -2.999520 2.396298 1.647251 [DEG: -171.8598 137.2978 94.3806 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS096_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS096_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 66 2.33 51.228 4.40 REMARK ---------------------------------------------------------- MOLECULE T0540TS096_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 25.544 9.568 9.388 1.00 0.00 N ATOM 2 CA MET 1 25.655 8.138 9.035 1.00 0.00 C ATOM 3 CB MET 1 24.976 7.884 7.677 1.00 0.00 C ATOM 4 CG MET 1 23.482 8.226 7.674 1.00 0.00 C ATOM 5 SD MET 1 22.459 7.238 8.806 1.00 0.00 S ATOM 6 CE MET 1 20.902 8.065 8.367 1.00 0.00 C ATOM 7 C MET 1 27.104 7.795 8.923 1.00 0.00 C ATOM 8 O MET 1 27.652 7.053 9.737 1.00 0.00 O ATOM 9 N THR 2 27.760 8.370 7.898 1.00 0.00 N ATOM 10 CA THR 2 29.165 8.216 7.645 1.00 0.00 C ATOM 11 CB THR 2 29.626 8.906 6.402 1.00 0.00 C ATOM 12 OG1 THR 2 28.897 8.457 5.272 1.00 0.00 O ATOM 13 CG2 THR 2 31.117 8.583 6.234 1.00 0.00 C ATOM 14 C THR 2 29.847 8.935 8.745 1.00 0.00 C ATOM 15 O THR 2 31.041 8.785 9.002 1.00 0.00 O ATOM 16 N ASP 3 29.040 9.798 9.362 1.00 0.00 N ATOM 17 CA ASP 3 29.390 10.815 10.283 1.00 0.00 C ATOM 18 CB ASP 3 30.799 10.748 10.888 1.00 0.00 C ATOM 19 CG ASP 3 30.718 11.570 12.163 1.00 0.00 C ATOM 20 OD1 ASP 3 29.807 12.437 12.240 1.00 0.00 O ATOM 21 OD2 ASP 3 31.539 11.331 13.087 1.00 0.00 O ATOM 22 C ASP 3 29.303 11.891 9.284 1.00 0.00 C ATOM 23 O ASP 3 28.203 12.257 8.882 1.00 0.00 O ATOM 24 N LEU 4 30.442 12.401 8.805 1.00 0.00 N ATOM 25 CA LEU 4 30.289 13.254 7.682 1.00 0.00 C ATOM 26 CB LEU 4 30.463 14.742 8.015 1.00 0.00 C ATOM 27 CG LEU 4 29.348 15.255 8.951 1.00 0.00 C ATOM 28 CD1 LEU 4 29.431 14.633 10.355 1.00 0.00 C ATOM 29 CD2 LEU 4 29.314 16.784 8.980 1.00 0.00 C ATOM 30 C LEU 4 31.314 12.819 6.681 1.00 0.00 C ATOM 31 O LEU 4 32.348 12.253 7.026 1.00 0.00 O ATOM 32 N VAL 5 30.983 12.930 5.388 1.00 0.00 N ATOM 33 CA VAL 5 31.959 12.800 4.357 1.00 0.00 C ATOM 34 CB VAL 5 31.794 11.624 3.432 1.00 0.00 C ATOM 35 CG1 VAL 5 32.240 10.363 4.177 1.00 0.00 C ATOM 36 CG2 VAL 5 30.332 11.539 2.964 1.00 0.00 C ATOM 37 C VAL 5 31.728 14.046 3.587 1.00 0.00 C ATOM 38 O VAL 5 30.642 14.253 3.045 1.00 0.00 O ATOM 39 N ALA 6 32.731 14.937 3.548 1.00 0.00 N ATOM 40 CA ALA 6 32.478 16.170 2.872 1.00 0.00 C ATOM 41 CB ALA 6 32.810 17.421 3.700 1.00 0.00 C ATOM 42 C ALA 6 33.369 16.146 1.692 1.00 0.00 C ATOM 43 O ALA 6 34.564 15.890 1.822 1.00 0.00 O ATOM 44 N VAL 7 32.837 16.470 0.503 1.00 0.00 N ATOM 45 CA VAL 7 33.669 16.078 -0.588 1.00 0.00 C ATOM 46 CB VAL 7 33.127 14.860 -1.270 1.00 0.00 C ATOM 47 CG1 VAL 7 33.091 13.708 -0.246 1.00 0.00 C ATOM 48 CG2 VAL 7 31.738 15.209 -1.836 1.00 0.00 C ATOM 49 C VAL 7 33.837 17.119 -1.638 1.00 0.00 C ATOM 50 O VAL 7 32.945 17.922 -1.913 1.00 0.00 O ATOM 51 N TRP 8 35.044 17.122 -2.246 1.00 0.00 N ATOM 52 CA TRP 8 35.238 17.971 -3.379 1.00 0.00 C ATOM 53 CB TRP 8 35.840 19.348 -3.086 1.00 0.00 C ATOM 54 CG TRP 8 34.953 20.102 -2.157 1.00 0.00 C ATOM 55 CD2 TRP 8 34.980 19.836 -0.760 1.00 0.00 C ATOM 56 CD1 TRP 8 33.976 21.024 -2.369 1.00 0.00 C ATOM 57 NE1 TRP 8 33.379 21.339 -1.174 1.00 0.00 N ATOM 58 CE2 TRP 8 33.991 20.612 -0.172 1.00 0.00 C ATOM 59 CE3 TRP 8 35.766 18.996 -0.035 1.00 0.00 C ATOM 60 CZ2 TRP 8 33.767 20.559 1.172 1.00 0.00 C ATOM 61 CZ3 TRP 8 35.539 18.958 1.314 1.00 0.00 C ATOM 62 CH2 TRP 8 34.562 19.717 1.913 1.00 0.00 H ATOM 63 C TRP 8 36.194 17.344 -4.315 1.00 0.00 C ATOM 64 O TRP 8 37.096 16.596 -3.937 1.00 0.00 O ATOM 65 N ASP 9 35.949 17.627 -5.598 1.00 0.00 N ATOM 66 CA ASP 9 36.889 17.347 -6.621 1.00 0.00 C ATOM 67 CB ASP 9 36.290 16.737 -7.898 1.00 0.00 C ATOM 68 CG ASP 9 37.463 16.415 -8.811 1.00 0.00 C ATOM 69 OD1 ASP 9 38.611 16.761 -8.425 1.00 0.00 O ATOM 70 OD2 ASP 9 37.230 15.829 -9.903 1.00 0.00 O ATOM 71 C ASP 9 37.345 18.724 -6.963 1.00 0.00 C ATOM 72 O ASP 9 36.521 19.609 -7.198 1.00 0.00 O ATOM 73 N VAL 10 38.664 18.969 -6.894 1.00 0.00 N ATOM 74 CA VAL 10 39.133 20.262 -7.271 1.00 0.00 C ATOM 75 CB VAL 10 39.641 21.097 -6.139 1.00 0.00 C ATOM 76 CG1 VAL 10 40.448 22.279 -6.702 1.00 0.00 C ATOM 77 CG2 VAL 10 38.401 21.581 -5.377 1.00 0.00 C ATOM 78 C VAL 10 40.220 20.104 -8.258 1.00 0.00 C ATOM 79 O VAL 10 41.349 19.739 -7.930 1.00 0.00 O ATOM 80 N ALA 11 39.881 20.379 -9.525 1.00 0.00 N ATOM 81 CA ALA 11 40.906 20.367 -10.504 1.00 0.00 C ATOM 82 CB ALA 11 40.383 20.475 -11.945 1.00 0.00 C ATOM 83 C ALA 11 41.711 21.582 -10.190 1.00 0.00 C ATOM 84 O ALA 11 41.169 22.677 -10.027 1.00 0.00 O ATOM 85 N LEU 12 43.036 21.390 -10.079 1.00 0.00 N ATOM 86 CA LEU 12 43.984 22.421 -9.785 1.00 0.00 C ATOM 87 CB LEU 12 45.002 22.038 -8.694 1.00 0.00 C ATOM 88 CG LEU 12 44.465 22.093 -7.256 1.00 0.00 C ATOM 89 CD1 LEU 12 45.550 21.689 -6.241 1.00 0.00 C ATOM 90 CD2 LEU 12 43.885 23.484 -6.954 1.00 0.00 C ATOM 91 C LEU 12 44.766 22.583 -11.032 1.00 0.00 C ATOM 92 O LEU 12 44.209 22.570 -12.128 1.00 0.00 O ATOM 93 N SER 13 46.078 22.833 -10.892 1.00 0.00 N ATOM 94 CA SER 13 46.871 22.852 -12.077 1.00 0.00 C ATOM 95 CB SER 13 48.146 23.705 -11.962 1.00 0.00 C ATOM 96 OG SER 13 47.798 25.072 -11.800 1.00 0.00 O ATOM 97 C SER 13 47.288 21.437 -12.356 1.00 0.00 C ATOM 98 O SER 13 47.333 20.596 -11.459 1.00 0.00 O ATOM 99 N ASP 14 47.537 21.141 -13.647 1.00 0.00 N ATOM 100 CA ASP 14 48.077 19.900 -14.128 1.00 0.00 C ATOM 101 CB ASP 14 49.603 19.801 -13.985 1.00 0.00 C ATOM 102 CG ASP 14 50.218 20.697 -15.046 1.00 0.00 C ATOM 103 OD1 ASP 14 49.859 20.528 -16.242 1.00 0.00 O ATOM 104 OD2 ASP 14 51.048 21.569 -14.674 1.00 0.00 O ATOM 105 C ASP 14 47.465 18.685 -13.502 1.00 0.00 C ATOM 106 O ASP 14 48.201 17.797 -13.068 1.00 0.00 O ATOM 107 N GLY 15 46.120 18.579 -13.449 1.00 0.00 N ATOM 108 CA GLY 15 45.570 17.350 -12.948 1.00 0.00 C ATOM 109 C GLY 15 44.334 17.623 -12.154 1.00 0.00 C ATOM 110 O GLY 15 43.967 18.772 -11.912 1.00 0.00 O ATOM 111 N VAL 16 43.650 16.540 -11.729 1.00 0.00 N ATOM 112 CA VAL 16 42.468 16.720 -10.947 1.00 0.00 C ATOM 113 CB VAL 16 41.258 16.015 -11.512 1.00 0.00 C ATOM 114 CG1 VAL 16 41.438 14.487 -11.469 1.00 0.00 C ATOM 115 CG2 VAL 16 40.026 16.527 -10.760 1.00 0.00 C ATOM 116 C VAL 16 42.778 16.233 -9.562 1.00 0.00 C ATOM 117 O VAL 16 43.030 15.054 -9.324 1.00 0.00 O ATOM 118 N HIS 17 42.761 17.154 -8.585 1.00 0.00 N ATOM 119 CA HIS 17 43.129 16.766 -7.259 1.00 0.00 C ATOM 120 ND1 HIS 17 46.421 17.746 -6.901 1.00 0.00 N ATOM 121 CG HIS 17 45.175 18.227 -7.237 1.00 0.00 C ATOM 122 CB HIS 17 43.905 17.870 -6.524 1.00 0.00 C ATOM 123 NE2 HIS 17 46.705 19.066 -8.667 1.00 0.00 N ATOM 124 CD2 HIS 17 45.367 19.031 -8.317 1.00 0.00 C ATOM 125 CE1 HIS 17 47.297 18.278 -7.788 1.00 0.00 C ATOM 126 C HIS 17 41.874 16.486 -6.512 1.00 0.00 C ATOM 127 O HIS 17 40.960 17.306 -6.502 1.00 0.00 O ATOM 128 N LYS 18 41.785 15.294 -5.888 1.00 0.00 N ATOM 129 CA LYS 18 40.598 14.976 -5.147 1.00 0.00 C ATOM 130 CB LYS 18 40.167 13.510 -5.305 1.00 0.00 C ATOM 131 CG LYS 18 38.659 13.331 -5.150 1.00 0.00 C ATOM 132 CD LYS 18 37.874 13.962 -6.304 1.00 0.00 C ATOM 133 CE LYS 18 36.357 13.821 -6.170 1.00 0.00 C ATOM 134 NZ LYS 18 35.967 12.400 -6.298 1.00 0.00 N ATOM 135 C LYS 18 40.883 15.273 -3.687 1.00 0.00 C ATOM 136 O LYS 18 41.873 14.808 -3.129 1.00 0.00 O ATOM 137 N ILE 19 40.038 16.158 -3.113 1.00 0.00 N ATOM 138 CA ILE 19 39.904 16.816 -1.824 1.00 0.00 C ATOM 139 CB ILE 19 39.256 18.186 -2.000 1.00 0.00 C ATOM 140 CG2 ILE 19 39.106 18.962 -0.683 1.00 0.00 C ATOM 141 CG1 ILE 19 40.130 19.022 -2.938 1.00 0.00 C ATOM 142 CD1 ILE 19 39.939 18.681 -4.395 1.00 0.00 C ATOM 143 C ILE 19 39.276 16.052 -0.647 1.00 0.00 C ATOM 144 O ILE 19 39.260 16.537 0.481 1.00 0.00 O ATOM 145 N GLU 20 38.608 14.913 -0.864 1.00 0.00 N ATOM 146 CA GLU 20 37.718 14.263 0.085 1.00 0.00 C ATOM 147 CB GLU 20 37.329 12.820 -0.298 1.00 0.00 C ATOM 148 CG GLU 20 36.124 12.727 -1.241 1.00 0.00 C ATOM 149 CD GLU 20 36.573 12.790 -2.687 1.00 0.00 C ATOM 150 OE1 GLU 20 37.496 12.012 -3.047 1.00 0.00 O ATOM 151 OE2 GLU 20 35.996 13.613 -3.448 1.00 0.00 O ATOM 152 C GLU 20 37.997 14.237 1.569 1.00 0.00 C ATOM 153 O GLU 20 38.936 13.618 2.062 1.00 0.00 O ATOM 154 N PHE 21 37.049 14.850 2.324 1.00 0.00 N ATOM 155 CA PHE 21 36.955 14.842 3.763 1.00 0.00 C ATOM 156 CB PHE 21 35.699 15.506 4.332 1.00 0.00 C ATOM 157 CG PHE 21 35.721 16.945 4.649 1.00 0.00 C ATOM 158 CD1 PHE 21 36.382 17.869 3.892 1.00 0.00 C ATOM 159 CD2 PHE 21 34.956 17.347 5.720 1.00 0.00 C ATOM 160 CE1 PHE 21 36.307 19.196 4.236 1.00 0.00 C ATOM 161 CE2 PHE 21 34.873 18.665 6.070 1.00 0.00 C ATOM 162 CZ PHE 21 35.553 19.581 5.320 1.00 0.00 C ATOM 163 C PHE 21 36.563 13.483 4.204 1.00 0.00 C ATOM 164 O PHE 21 35.635 12.875 3.670 1.00 0.00 O ATOM 165 N GLU 22 37.270 13.018 5.234 1.00 0.00 N ATOM 166 CA GLU 22 36.864 11.932 6.052 1.00 0.00 C ATOM 167 CB GLU 22 38.021 10.970 6.373 1.00 0.00 C ATOM 168 CG GLU 22 37.906 10.277 7.733 1.00 0.00 C ATOM 169 CD GLU 22 38.803 11.061 8.690 1.00 0.00 C ATOM 170 OE1 GLU 22 40.040 11.057 8.453 1.00 0.00 O ATOM 171 OE2 GLU 22 38.277 11.675 9.656 1.00 0.00 O ATOM 172 C GLU 22 36.531 12.668 7.305 1.00 0.00 C ATOM 173 O GLU 22 37.385 13.390 7.815 1.00 0.00 O ATOM 174 N HIS 23 35.240 12.664 7.712 1.00 0.00 N ATOM 175 CA HIS 23 34.863 13.222 8.985 1.00 0.00 C ATOM 176 ND1 HIS 23 32.853 13.776 11.559 1.00 0.00 N ATOM 177 CG HIS 23 33.005 14.386 10.334 1.00 0.00 C ATOM 178 CB HIS 23 33.391 13.667 9.080 1.00 0.00 C ATOM 179 NE2 HIS 23 32.401 15.931 11.867 1.00 0.00 N ATOM 180 CD2 HIS 23 32.725 15.705 10.541 1.00 0.00 C ATOM 181 CE1 HIS 23 32.491 14.743 12.439 1.00 0.00 C ATOM 182 C HIS 23 35.135 12.219 10.067 1.00 0.00 C ATOM 183 O HIS 23 35.527 12.605 11.160 1.00 0.00 O ATOM 184 N GLY 24 34.874 10.911 9.805 1.00 0.00 N ATOM 185 CA GLY 24 35.187 9.823 10.711 1.00 0.00 C ATOM 186 C GLY 24 34.797 10.173 12.111 1.00 0.00 C ATOM 187 O GLY 24 33.649 10.056 12.503 1.00 0.00 O ATOM 188 N THR 25 35.767 10.535 12.961 1.00 0.00 N ATOM 189 CA THR 25 35.362 11.007 14.251 1.00 0.00 C ATOM 190 CB THR 25 35.777 10.099 15.376 1.00 0.00 C ATOM 191 OG1 THR 25 35.341 10.640 16.613 1.00 0.00 O ATOM 192 CG2 THR 25 37.299 9.872 15.364 1.00 0.00 C ATOM 193 C THR 25 35.987 12.355 14.395 1.00 0.00 C ATOM 194 O THR 25 36.903 12.570 15.187 1.00 0.00 O ATOM 195 N THR 26 35.447 13.347 13.665 1.00 0.00 N ATOM 196 CA THR 26 36.229 14.532 13.645 1.00 0.00 C ATOM 197 CB THR 26 36.690 14.838 12.248 1.00 0.00 C ATOM 198 OG1 THR 26 37.806 15.697 12.275 1.00 0.00 O ATOM 199 CG2 THR 26 35.566 15.441 11.421 1.00 0.00 C ATOM 200 C THR 26 35.553 15.648 14.372 1.00 0.00 C ATOM 201 O THR 26 34.734 16.404 13.846 1.00 0.00 O ATOM 202 N SER 27 35.935 15.774 15.655 1.00 0.00 N ATOM 203 CA SER 27 35.358 16.744 16.527 1.00 0.00 C ATOM 204 CB SER 27 35.932 16.664 17.947 1.00 0.00 C ATOM 205 OG SER 27 35.774 15.346 18.451 1.00 0.00 O ATOM 206 C SER 27 35.661 18.108 16.004 1.00 0.00 C ATOM 207 O SER 27 36.775 18.614 16.131 1.00 0.00 O ATOM 208 N GLY 28 34.634 18.730 15.400 1.00 0.00 N ATOM 209 CA GLY 28 34.653 20.086 14.936 1.00 0.00 C ATOM 210 C GLY 28 35.253 20.176 13.570 1.00 0.00 C ATOM 211 O GLY 28 35.051 21.164 12.871 1.00 0.00 O ATOM 212 N LYS 29 35.935 19.118 13.106 1.00 0.00 N ATOM 213 CA LYS 29 36.771 19.332 11.963 1.00 0.00 C ATOM 214 CB LYS 29 38.011 18.433 11.995 1.00 0.00 C ATOM 215 CG LYS 29 38.724 18.488 13.352 1.00 0.00 C ATOM 216 CD LYS 29 39.690 17.333 13.617 1.00 0.00 C ATOM 217 CE LYS 29 39.158 16.317 14.630 1.00 0.00 C ATOM 218 NZ LYS 29 39.083 16.941 15.970 1.00 0.00 N ATOM 219 C LYS 29 36.098 19.201 10.640 1.00 0.00 C ATOM 220 O LYS 29 35.028 18.614 10.480 1.00 0.00 O ATOM 221 N ARG 30 36.754 19.845 9.658 1.00 0.00 N ATOM 222 CA ARG 30 36.450 19.837 8.266 1.00 0.00 C ATOM 223 CB ARG 30 35.852 21.169 7.798 1.00 0.00 C ATOM 224 CG ARG 30 34.394 21.373 8.239 1.00 0.00 C ATOM 225 CD ARG 30 34.183 21.556 9.748 1.00 0.00 C ATOM 226 NE ARG 30 32.751 21.931 9.955 1.00 0.00 N ATOM 227 CZ ARG 30 32.377 22.621 11.073 1.00 0.00 C ATOM 228 NH1 ARG 30 33.311 22.977 11.999 1.00 0.00 H ATOM 229 NH2 ARG 30 31.071 22.968 11.272 1.00 0.00 H ATOM 230 C ARG 30 37.798 19.555 7.665 1.00 0.00 C ATOM 231 O ARG 30 38.802 20.112 8.117 1.00 0.00 O ATOM 232 N VAL 31 37.861 18.666 6.656 1.00 0.00 N ATOM 233 CA VAL 31 39.159 18.171 6.318 1.00 0.00 C ATOM 234 CB VAL 31 39.341 16.797 6.899 1.00 0.00 C ATOM 235 CG1 VAL 31 40.731 16.257 6.543 1.00 0.00 C ATOM 236 CG2 VAL 31 39.057 16.877 8.407 1.00 0.00 C ATOM 237 C VAL 31 39.405 18.058 4.843 1.00 0.00 C ATOM 238 O VAL 31 39.013 17.088 4.195 1.00 0.00 O ATOM 239 N VAL 32 40.138 19.030 4.270 1.00 0.00 N ATOM 240 CA VAL 32 40.491 18.889 2.891 1.00 0.00 C ATOM 241 CB VAL 32 40.939 20.169 2.247 1.00 0.00 C ATOM 242 CG1 VAL 32 41.506 19.858 0.850 1.00 0.00 C ATOM 243 CG2 VAL 32 39.739 21.132 2.209 1.00 0.00 C ATOM 244 C VAL 32 41.620 17.910 2.814 1.00 0.00 C ATOM 245 O VAL 32 42.606 18.020 3.541 1.00 0.00 O ATOM 246 N TYR 33 41.475 16.883 1.950 1.00 0.00 N ATOM 247 CA TYR 33 42.550 15.957 1.725 1.00 0.00 C ATOM 248 CB TYR 33 42.215 14.465 1.922 1.00 0.00 C ATOM 249 CG TYR 33 42.103 14.119 3.370 1.00 0.00 C ATOM 250 CD1 TYR 33 43.148 14.387 4.222 1.00 0.00 C ATOM 251 CD2 TYR 33 40.992 13.471 3.864 1.00 0.00 C ATOM 252 CE1 TYR 33 43.064 14.051 5.551 1.00 0.00 C ATOM 253 CE2 TYR 33 40.903 13.130 5.194 1.00 0.00 C ATOM 254 CZ TYR 33 41.945 13.427 6.039 1.00 0.00 C ATOM 255 OH TYR 33 41.881 13.086 7.403 1.00 0.00 H ATOM 256 C TYR 33 42.909 16.085 0.286 1.00 0.00 C ATOM 257 O TYR 33 42.207 15.565 -0.579 1.00 0.00 O ATOM 258 N VAL 34 44.044 16.743 -0.014 1.00 0.00 N ATOM 259 CA VAL 34 44.363 16.980 -1.386 1.00 0.00 C ATOM 260 CB VAL 34 44.787 18.400 -1.644 1.00 0.00 C ATOM 261 CG1 VAL 34 46.049 18.688 -0.814 1.00 0.00 C ATOM 262 CG2 VAL 34 44.973 18.601 -3.158 1.00 0.00 C ATOM 263 C VAL 34 45.477 16.086 -1.830 1.00 0.00 C ATOM 264 O VAL 34 46.481 15.927 -1.139 1.00 0.00 O ATOM 265 N ASP 35 45.290 15.459 -3.009 1.00 0.00 N ATOM 266 CA ASP 35 46.299 14.681 -3.671 1.00 0.00 C ATOM 267 CB ASP 35 47.497 15.552 -4.107 1.00 0.00 C ATOM 268 CG ASP 35 48.375 14.780 -5.085 1.00 0.00 C ATOM 269 OD1 ASP 35 47.943 13.685 -5.531 1.00 0.00 O ATOM 270 OD2 ASP 35 49.493 15.275 -5.392 1.00 0.00 O ATOM 271 C ASP 35 46.812 13.585 -2.785 1.00 0.00 C ATOM 272 O ASP 35 47.954 13.150 -2.928 1.00 0.00 O ATOM 273 N GLY 36 45.975 13.060 -1.876 1.00 0.00 N ATOM 274 CA GLY 36 46.437 11.987 -1.041 1.00 0.00 C ATOM 275 C GLY 36 47.235 12.549 0.098 1.00 0.00 C ATOM 276 O GLY 36 47.973 11.816 0.756 1.00 0.00 O ATOM 277 N LYS 37 47.116 13.870 0.355 1.00 0.00 N ATOM 278 CA LYS 37 47.834 14.490 1.435 1.00 0.00 C ATOM 279 CB LYS 37 48.584 15.771 1.031 1.00 0.00 C ATOM 280 CG LYS 37 49.267 15.689 -0.334 1.00 0.00 C ATOM 281 CD LYS 37 50.152 14.462 -0.534 1.00 0.00 C ATOM 282 CE LYS 37 50.729 14.384 -1.947 1.00 0.00 C ATOM 283 NZ LYS 37 51.106 12.993 -2.270 1.00 0.00 N ATOM 284 C LYS 37 46.805 14.937 2.446 1.00 0.00 C ATOM 285 O LYS 37 45.729 15.413 2.090 1.00 0.00 O ATOM 286 N GLU 38 47.134 14.755 3.739 1.00 0.00 N ATOM 287 CA GLU 38 46.360 15.005 4.932 1.00 0.00 C ATOM 288 CB GLU 38 46.761 14.081 6.103 1.00 0.00 C ATOM 289 CG GLU 38 45.590 13.700 7.026 1.00 0.00 C ATOM 290 CD GLU 38 45.710 14.239 8.450 1.00 0.00 C ATOM 291 OE1 GLU 38 45.789 15.474 8.674 1.00 0.00 O ATOM 292 OE2 GLU 38 45.696 13.379 9.367 1.00 0.00 O ATOM 293 C GLU 38 46.396 16.448 5.404 1.00 0.00 C ATOM 294 O GLU 38 45.936 16.731 6.503 1.00 0.00 O ATOM 295 N GLU 39 46.990 17.387 4.650 1.00 0.00 N ATOM 296 CA GLU 39 47.498 18.635 5.182 1.00 0.00 C ATOM 297 CB GLU 39 48.253 19.422 4.099 1.00 0.00 C ATOM 298 CG GLU 39 47.442 19.691 2.834 1.00 0.00 C ATOM 299 CD GLU 39 48.359 20.448 1.886 1.00 0.00 C ATOM 300 OE1 GLU 39 49.560 20.072 1.805 1.00 0.00 O ATOM 301 OE2 GLU 39 47.875 21.410 1.231 1.00 0.00 O ATOM 302 C GLU 39 46.715 19.641 6.022 1.00 0.00 C ATOM 303 O GLU 39 47.001 19.759 7.210 1.00 0.00 O ATOM 304 N ILE 40 45.696 20.342 5.499 1.00 0.00 N ATOM 305 CA ILE 40 45.099 21.519 6.110 1.00 0.00 C ATOM 306 CB ILE 40 44.243 22.274 5.140 1.00 0.00 C ATOM 307 CG2 ILE 40 43.781 23.583 5.803 1.00 0.00 C ATOM 308 CG1 ILE 40 45.055 22.557 3.866 1.00 0.00 C ATOM 309 CD1 ILE 40 46.322 23.371 4.121 1.00 0.00 C ATOM 310 C ILE 40 44.351 21.258 7.400 1.00 0.00 C ATOM 311 O ILE 40 44.013 22.184 8.141 1.00 0.00 O ATOM 312 N ARG 41 44.053 19.984 7.693 1.00 0.00 N ATOM 313 CA ARG 41 43.137 19.535 8.704 1.00 0.00 C ATOM 314 CB ARG 41 43.301 18.026 8.975 1.00 0.00 C ATOM 315 CG ARG 41 42.502 17.515 10.179 1.00 0.00 C ATOM 316 CD ARG 41 42.819 16.072 10.594 1.00 0.00 C ATOM 317 NE ARG 41 42.064 15.132 9.713 1.00 0.00 N ATOM 318 CZ ARG 41 40.852 14.651 10.123 1.00 0.00 C ATOM 319 NH1 ARG 41 40.322 15.059 11.310 1.00 0.00 H ATOM 320 NH2 ARG 41 40.157 13.760 9.359 1.00 0.00 H ATOM 321 C ARG 41 43.263 20.214 10.041 1.00 0.00 C ATOM 322 O ARG 41 42.240 20.610 10.596 1.00 0.00 O ATOM 323 N LYS 42 44.469 20.363 10.614 1.00 0.00 N ATOM 324 CA LYS 42 44.581 20.860 11.963 1.00 0.00 C ATOM 325 CB LYS 42 46.017 20.758 12.498 1.00 0.00 C ATOM 326 CG LYS 42 46.534 19.317 12.504 1.00 0.00 C ATOM 327 CD LYS 42 46.764 18.757 11.099 1.00 0.00 C ATOM 328 CE LYS 42 47.053 17.255 11.069 1.00 0.00 C ATOM 329 NZ LYS 42 45.784 16.500 11.175 1.00 0.00 N ATOM 330 C LYS 42 44.138 22.287 12.134 1.00 0.00 C ATOM 331 O LYS 42 43.383 22.593 13.057 1.00 0.00 O ATOM 332 N GLU 43 44.605 23.210 11.273 1.00 0.00 N ATOM 333 CA GLU 43 44.280 24.597 11.453 1.00 0.00 C ATOM 334 CB GLU 43 45.026 25.520 10.475 1.00 0.00 C ATOM 335 CG GLU 43 44.571 26.981 10.552 1.00 0.00 C ATOM 336 CD GLU 43 44.914 27.525 11.930 1.00 0.00 C ATOM 337 OE1 GLU 43 46.057 28.021 12.106 1.00 0.00 O ATOM 338 OE2 GLU 43 44.036 27.446 12.829 1.00 0.00 O ATOM 339 C GLU 43 42.822 24.843 11.258 1.00 0.00 C ATOM 340 O GLU 43 42.175 25.464 12.097 1.00 0.00 O ATOM 341 N TRP 44 42.258 24.346 10.147 1.00 0.00 N ATOM 342 CA TRP 44 40.892 24.664 9.863 1.00 0.00 C ATOM 343 CB TRP 44 40.566 24.720 8.376 1.00 0.00 C ATOM 344 CG TRP 44 41.295 25.951 7.891 1.00 0.00 C ATOM 345 CD2 TRP 44 40.841 27.282 8.177 1.00 0.00 C ATOM 346 CD1 TRP 44 42.506 26.079 7.277 1.00 0.00 C ATOM 347 NE1 TRP 44 42.848 27.410 7.190 1.00 0.00 N ATOM 348 CE2 TRP 44 41.829 28.162 7.739 1.00 0.00 C ATOM 349 CE3 TRP 44 39.698 27.733 8.772 1.00 0.00 C ATOM 350 CZ2 TRP 44 41.688 29.513 7.887 1.00 0.00 C ATOM 351 CZ3 TRP 44 39.553 29.096 8.911 1.00 0.00 C ATOM 352 CH2 TRP 44 40.529 29.969 8.479 1.00 0.00 H ATOM 353 C TRP 44 39.944 23.948 10.758 1.00 0.00 C ATOM 354 O TRP 44 38.806 24.378 10.929 1.00 0.00 O ATOM 355 N MET 45 40.372 22.803 11.308 1.00 0.00 N ATOM 356 CA MET 45 39.622 22.147 12.333 1.00 0.00 C ATOM 357 CB MET 45 40.352 20.866 12.774 1.00 0.00 C ATOM 358 CG MET 45 40.740 20.819 14.254 1.00 0.00 C ATOM 359 SD MET 45 39.388 20.691 15.455 1.00 0.00 S ATOM 360 CE MET 45 40.548 20.784 16.849 1.00 0.00 C ATOM 361 C MET 45 39.515 23.071 13.519 1.00 0.00 C ATOM 362 O MET 45 38.429 23.282 14.048 1.00 0.00 O ATOM 363 N PHE 46 40.623 23.707 13.941 1.00 0.00 N ATOM 364 CA PHE 46 40.608 24.533 15.124 1.00 0.00 C ATOM 365 CB PHE 46 41.996 25.118 15.445 1.00 0.00 C ATOM 366 CG PHE 46 41.878 25.950 16.675 1.00 0.00 C ATOM 367 CD1 PHE 46 41.828 25.367 17.922 1.00 0.00 C ATOM 368 CD2 PHE 46 41.830 27.321 16.578 1.00 0.00 C ATOM 369 CE1 PHE 46 41.722 26.144 19.050 1.00 0.00 C ATOM 370 CE2 PHE 46 41.724 28.105 17.704 1.00 0.00 C ATOM 371 CZ PHE 46 41.669 27.513 18.943 1.00 0.00 C ATOM 372 C PHE 46 39.655 25.677 14.947 1.00 0.00 C ATOM 373 O PHE 46 38.959 26.073 15.880 1.00 0.00 O ATOM 374 N LYS 47 39.645 26.236 13.728 1.00 0.00 N ATOM 375 CA LYS 47 38.875 27.339 13.215 1.00 0.00 C ATOM 376 CB LYS 47 39.360 27.780 11.824 1.00 0.00 C ATOM 377 CG LYS 47 40.735 28.452 11.844 1.00 0.00 C ATOM 378 CD LYS 47 40.749 29.805 12.560 1.00 0.00 C ATOM 379 CE LYS 47 42.148 30.397 12.747 1.00 0.00 C ATOM 380 NZ LYS 47 42.867 29.674 13.822 1.00 0.00 N ATOM 381 C LYS 47 37.423 26.960 13.093 1.00 0.00 C ATOM 382 O LYS 47 36.594 27.800 12.750 1.00 0.00 O ATOM 383 N LEU 48 37.085 25.680 13.343 1.00 0.00 N ATOM 384 CA LEU 48 35.780 25.080 13.170 1.00 0.00 C ATOM 385 CB LEU 48 35.734 23.659 13.762 1.00 0.00 C ATOM 386 CG LEU 48 35.925 23.580 15.296 1.00 0.00 C ATOM 387 CD1 LEU 48 34.646 23.931 16.075 1.00 0.00 C ATOM 388 CD2 LEU 48 36.521 22.228 15.716 1.00 0.00 C ATOM 389 C LEU 48 34.717 25.873 13.874 1.00 0.00 C ATOM 390 O LEU 48 33.546 25.814 13.502 1.00 0.00 O ATOM 391 N VAL 49 35.080 26.618 14.929 1.00 0.00 N ATOM 392 CA VAL 49 34.101 27.339 15.693 1.00 0.00 C ATOM 393 CB VAL 49 34.712 28.198 16.771 1.00 0.00 C ATOM 394 CG1 VAL 49 35.629 29.251 16.128 1.00 0.00 C ATOM 395 CG2 VAL 49 33.574 28.802 17.612 1.00 0.00 C ATOM 396 C VAL 49 33.283 28.223 14.789 1.00 0.00 C ATOM 397 O VAL 49 32.093 28.414 15.031 1.00 0.00 O ATOM 398 N GLY 50 33.889 28.792 13.729 1.00 0.00 N ATOM 399 CA GLY 50 33.214 29.680 12.818 1.00 0.00 C ATOM 400 C GLY 50 32.839 28.906 11.596 1.00 0.00 C ATOM 401 O GLY 50 31.901 28.111 11.629 1.00 0.00 O ATOM 402 N LYS 51 33.501 29.210 10.459 1.00 0.00 N ATOM 403 CA LYS 51 33.307 28.454 9.254 1.00 0.00 C ATOM 404 CB LYS 51 32.512 29.200 8.170 1.00 0.00 C ATOM 405 CG LYS 51 31.948 28.261 7.103 1.00 0.00 C ATOM 406 CD LYS 51 30.885 27.286 7.625 1.00 0.00 C ATOM 407 CE LYS 51 29.475 27.874 7.711 1.00 0.00 C ATOM 408 NZ LYS 51 28.526 26.850 8.202 1.00 0.00 N ATOM 409 C LYS 51 34.686 28.139 8.740 1.00 0.00 C ATOM 410 O LYS 51 35.589 28.969 8.824 1.00 0.00 O ATOM 411 N GLU 52 34.865 26.939 8.149 1.00 0.00 N ATOM 412 CA GLU 52 36.168 26.400 7.868 1.00 0.00 C ATOM 413 CB GLU 52 36.158 24.861 7.855 1.00 0.00 C ATOM 414 CG GLU 52 35.671 24.256 9.174 1.00 0.00 C ATOM 415 CD GLU 52 34.158 24.453 9.247 1.00 0.00 C ATOM 416 OE1 GLU 52 33.465 24.072 8.267 1.00 0.00 O ATOM 417 OE2 GLU 52 33.678 24.992 10.281 1.00 0.00 O ATOM 418 C GLU 52 36.672 26.853 6.537 1.00 0.00 C ATOM 419 O GLU 52 36.058 26.589 5.503 1.00 0.00 O ATOM 420 N THR 53 37.846 27.524 6.534 1.00 0.00 N ATOM 421 CA THR 53 38.336 28.036 5.287 1.00 0.00 C ATOM 422 CB THR 53 38.532 29.521 5.312 1.00 0.00 C ATOM 423 OG1 THR 53 37.307 30.162 5.631 1.00 0.00 O ATOM 424 CG2 THR 53 39.018 29.989 3.930 1.00 0.00 C ATOM 425 C THR 53 39.652 27.405 4.951 1.00 0.00 C ATOM 426 O THR 53 40.714 27.933 5.270 1.00 0.00 O ATOM 427 N PHE 54 39.614 26.282 4.220 1.00 0.00 N ATOM 428 CA PHE 54 40.804 25.558 3.886 1.00 0.00 C ATOM 429 CB PHE 54 40.527 24.143 3.362 1.00 0.00 C ATOM 430 CG PHE 54 40.573 23.201 4.505 1.00 0.00 C ATOM 431 CD1 PHE 54 39.799 23.370 5.623 1.00 0.00 C ATOM 432 CD2 PHE 54 41.402 22.111 4.427 1.00 0.00 C ATOM 433 CE1 PHE 54 39.867 22.459 6.651 1.00 0.00 C ATOM 434 CE2 PHE 54 41.478 21.204 5.453 1.00 0.00 C ATOM 435 CZ PHE 54 40.706 21.376 6.573 1.00 0.00 C ATOM 436 C PHE 54 41.619 26.240 2.844 1.00 0.00 C ATOM 437 O PHE 54 41.124 26.873 1.919 1.00 0.00 O ATOM 438 N TYR 55 42.943 26.112 2.978 1.00 0.00 N ATOM 439 CA TYR 55 43.790 26.651 1.971 1.00 0.00 C ATOM 440 CB TYR 55 44.991 27.428 2.542 1.00 0.00 C ATOM 441 CG TYR 55 45.655 28.156 1.423 1.00 0.00 C ATOM 442 CD1 TYR 55 45.136 29.351 0.972 1.00 0.00 C ATOM 443 CD2 TYR 55 46.792 27.659 0.830 1.00 0.00 C ATOM 444 CE1 TYR 55 45.738 30.035 -0.056 1.00 0.00 C ATOM 445 CE2 TYR 55 47.399 28.341 -0.199 1.00 0.00 C ATOM 446 CZ TYR 55 46.872 29.529 -0.643 1.00 0.00 C ATOM 447 OH TYR 55 47.494 30.228 -1.698 1.00 0.00 H ATOM 448 C TYR 55 44.300 25.457 1.225 1.00 0.00 C ATOM 449 O TYR 55 44.425 24.373 1.797 1.00 0.00 O ATOM 450 N VAL 56 44.475 25.608 -0.105 1.00 0.00 N ATOM 451 CA VAL 56 45.096 24.607 -0.929 1.00 0.00 C ATOM 452 CB VAL 56 44.261 24.210 -2.115 1.00 0.00 C ATOM 453 CG1 VAL 56 45.058 23.213 -2.973 1.00 0.00 C ATOM 454 CG2 VAL 56 42.924 23.645 -1.601 1.00 0.00 C ATOM 455 C VAL 56 46.354 25.284 -1.407 1.00 0.00 C ATOM 456 O VAL 56 46.302 26.310 -2.081 1.00 0.00 O ATOM 457 N GLY 57 47.521 24.696 -1.082 1.00 0.00 N ATOM 458 CA GLY 57 48.822 25.314 -1.191 1.00 0.00 C ATOM 459 C GLY 57 49.329 25.685 -2.564 1.00 0.00 C ATOM 460 O GLY 57 49.968 26.724 -2.718 1.00 0.00 O ATOM 461 N ALA 58 49.051 24.887 -3.606 1.00 0.00 N ATOM 462 CA ALA 58 49.746 24.990 -4.868 1.00 0.00 C ATOM 463 CB ALA 58 49.209 23.981 -5.901 1.00 0.00 C ATOM 464 C ALA 58 49.697 26.346 -5.511 1.00 0.00 C ATOM 465 O ALA 58 50.696 26.781 -6.084 1.00 0.00 O ATOM 466 N ALA 59 48.557 27.053 -5.460 1.00 0.00 N ATOM 467 CA ALA 59 48.456 28.309 -6.156 1.00 0.00 C ATOM 468 CB ALA 59 47.572 28.231 -7.412 1.00 0.00 C ATOM 469 C ALA 59 47.811 29.263 -5.211 1.00 0.00 C ATOM 470 O ALA 59 48.107 29.244 -4.019 1.00 0.00 O ATOM 471 N LYS 60 47.020 30.217 -5.740 1.00 0.00 N ATOM 472 CA LYS 60 46.266 31.030 -4.835 1.00 0.00 C ATOM 473 CB LYS 60 46.273 32.529 -5.168 1.00 0.00 C ATOM 474 CG LYS 60 47.644 33.129 -4.873 1.00 0.00 C ATOM 475 CD LYS 60 48.098 32.798 -3.451 1.00 0.00 C ATOM 476 CE LYS 60 49.589 33.011 -3.199 1.00 0.00 C ATOM 477 NZ LYS 60 49.992 32.273 -1.984 1.00 0.00 N ATOM 478 C LYS 60 44.876 30.507 -4.922 1.00 0.00 C ATOM 479 O LYS 60 44.074 30.944 -5.747 1.00 0.00 O ATOM 480 N THR 61 44.573 29.530 -4.049 1.00 0.00 N ATOM 481 CA THR 61 43.321 28.852 -4.079 1.00 0.00 C ATOM 482 CB THR 61 43.481 27.470 -4.626 1.00 0.00 C ATOM 483 OG1 THR 61 44.491 26.788 -3.896 1.00 0.00 O ATOM 484 CG2 THR 61 43.874 27.567 -6.110 1.00 0.00 C ATOM 485 C THR 61 42.795 28.768 -2.682 1.00 0.00 C ATOM 486 O THR 61 43.466 28.247 -1.791 1.00 0.00 O ATOM 487 N LYS 62 41.556 29.256 -2.453 1.00 0.00 N ATOM 488 CA LYS 62 41.080 29.263 -1.102 1.00 0.00 C ATOM 489 CB LYS 62 40.762 30.676 -0.578 1.00 0.00 C ATOM 490 CG LYS 62 39.728 31.436 -1.413 1.00 0.00 C ATOM 491 CD LYS 62 39.139 32.657 -0.701 1.00 0.00 C ATOM 492 CE LYS 62 37.756 32.407 -0.095 1.00 0.00 C ATOM 493 NZ LYS 62 37.827 31.327 0.914 1.00 0.00 N ATOM 494 C LYS 62 39.841 28.425 -0.942 1.00 0.00 C ATOM 495 O LYS 62 38.720 28.914 -1.060 1.00 0.00 O ATOM 496 N ALA 63 40.031 27.140 -0.585 1.00 0.00 N ATOM 497 CA ALA 63 38.992 26.176 -0.326 1.00 0.00 C ATOM 498 CB ALA 63 39.594 24.816 0.035 1.00 0.00 C ATOM 499 C ALA 63 38.162 26.653 0.870 1.00 0.00 C ATOM 500 O ALA 63 38.662 27.344 1.745 1.00 0.00 O ATOM 501 N THR 64 36.824 26.452 0.839 1.00 0.00 N ATOM 502 CA THR 64 35.846 26.935 1.809 1.00 0.00 C ATOM 503 CB THR 64 34.957 27.957 1.146 1.00 0.00 C ATOM 504 OG1 THR 64 35.790 28.873 0.452 1.00 0.00 O ATOM 505 CG2 THR 64 34.198 28.785 2.203 1.00 0.00 C ATOM 506 C THR 64 35.047 25.917 2.640 1.00 0.00 C ATOM 507 O THR 64 33.989 26.256 3.164 1.00 0.00 O ATOM 508 N ILE 65 35.472 24.653 2.797 1.00 0.00 N ATOM 509 CA ILE 65 34.687 23.437 2.983 1.00 0.00 C ATOM 510 CB ILE 65 35.604 22.386 3.491 1.00 0.00 C ATOM 511 CG2 ILE 65 36.578 22.019 2.359 1.00 0.00 C ATOM 512 CG1 ILE 65 36.300 22.926 4.744 1.00 0.00 C ATOM 513 CD1 ILE 65 37.275 21.935 5.351 1.00 0.00 C ATOM 514 C ILE 65 33.367 23.428 3.752 1.00 0.00 C ATOM 515 O ILE 65 32.551 22.553 3.470 1.00 0.00 O ATOM 516 N ASN 66 33.147 24.237 4.796 1.00 0.00 N ATOM 517 CA ASN 66 31.893 24.537 5.478 1.00 0.00 C ATOM 518 CB ASN 66 31.111 25.751 4.922 1.00 0.00 C ATOM 519 CG ASN 66 30.360 25.420 3.641 1.00 0.00 C ATOM 520 OD1 ASN 66 30.651 24.468 2.920 1.00 0.00 O ATOM 521 ND2 ASN 66 29.324 26.253 3.357 1.00 0.00 N ATOM 522 C ASN 66 30.896 23.458 5.831 1.00 0.00 C ATOM 523 O ASN 66 29.701 23.670 5.642 1.00 0.00 O ATOM 524 N ILE 67 31.294 22.307 6.403 1.00 0.00 N ATOM 525 CA ILE 67 30.276 21.443 6.959 1.00 0.00 C ATOM 526 CB ILE 67 30.834 20.209 7.595 1.00 0.00 C ATOM 527 CG2 ILE 67 29.749 19.656 8.526 1.00 0.00 C ATOM 528 CG1 ILE 67 31.378 19.224 6.546 1.00 0.00 C ATOM 529 CD1 ILE 67 32.199 18.084 7.147 1.00 0.00 C ATOM 530 C ILE 67 29.610 22.218 8.076 1.00 0.00 C ATOM 531 O ILE 67 30.281 23.009 8.734 1.00 0.00 O ATOM 532 N ASP 68 28.257 22.146 8.223 1.00 0.00 N ATOM 533 CA ASP 68 27.586 22.781 9.343 1.00 0.00 C ATOM 534 CB ASP 68 26.096 23.060 9.101 1.00 0.00 C ATOM 535 CG ASP 68 25.998 24.254 8.162 1.00 0.00 C ATOM 536 OD1 ASP 68 27.051 24.662 7.607 1.00 0.00 O ATOM 537 OD2 ASP 68 24.869 24.786 8.000 1.00 0.00 O ATOM 538 C ASP 68 27.705 21.994 10.629 1.00 0.00 C ATOM 539 O ASP 68 28.158 22.510 11.648 1.00 0.00 O ATOM 540 N ALA 69 27.264 20.717 10.603 1.00 0.00 N ATOM 541 CA ALA 69 27.334 19.724 11.653 1.00 0.00 C ATOM 542 CB ALA 69 28.766 19.207 11.885 1.00 0.00 C ATOM 543 C ALA 69 26.786 20.156 12.990 1.00 0.00 C ATOM 544 O ALA 69 27.206 19.615 14.011 1.00 0.00 O ATOM 545 N ILE 70 25.785 21.053 13.061 1.00 0.00 N ATOM 546 CA ILE 70 25.376 21.456 14.381 1.00 0.00 C ATOM 547 CB ILE 70 24.801 22.845 14.412 1.00 0.00 C ATOM 548 CG2 ILE 70 25.921 23.828 14.042 1.00 0.00 C ATOM 549 CG1 ILE 70 23.567 22.949 13.501 1.00 0.00 C ATOM 550 CD1 ILE 70 22.764 24.232 13.708 1.00 0.00 C ATOM 551 C ILE 70 24.359 20.505 14.936 1.00 0.00 C ATOM 552 O ILE 70 23.237 20.399 14.445 1.00 0.00 O ATOM 553 N SER 71 24.761 19.774 15.998 1.00 0.00 N ATOM 554 CA SER 71 23.894 18.886 16.719 1.00 0.00 C ATOM 555 CB SER 71 22.835 19.640 17.546 1.00 0.00 C ATOM 556 OG SER 71 22.008 18.727 18.252 1.00 0.00 O ATOM 557 C SER 71 23.213 17.986 15.742 1.00 0.00 C ATOM 558 O SER 71 22.055 17.610 15.928 1.00 0.00 O ATOM 559 N GLY 72 23.933 17.594 14.674 1.00 0.00 N ATOM 560 CA GLY 72 23.335 16.755 13.678 1.00 0.00 C ATOM 561 C GLY 72 24.290 16.660 12.524 1.00 0.00 C ATOM 562 O GLY 72 25.313 17.341 12.477 1.00 0.00 O ATOM 563 N PHE 73 23.899 15.832 11.541 1.00 0.00 N ATOM 564 CA PHE 73 24.608 15.402 10.371 1.00 0.00 C ATOM 565 CB PHE 73 24.008 14.161 9.688 1.00 0.00 C ATOM 566 CG PHE 73 24.184 13.004 10.607 1.00 0.00 C ATOM 567 CD1 PHE 73 25.430 12.457 10.799 1.00 0.00 C ATOM 568 CD2 PHE 73 23.112 12.486 11.298 1.00 0.00 C ATOM 569 CE1 PHE 73 25.604 11.391 11.650 1.00 0.00 C ATOM 570 CE2 PHE 73 23.281 11.419 12.148 1.00 0.00 C ATOM 571 CZ PHE 73 24.527 10.869 12.325 1.00 0.00 C ATOM 572 C PHE 73 24.782 16.442 9.311 1.00 0.00 C ATOM 573 O PHE 73 25.452 16.129 8.334 1.00 0.00 O ATOM 574 N ALA 74 24.113 17.617 9.381 1.00 0.00 N ATOM 575 CA ALA 74 24.124 18.593 8.310 1.00 0.00 C ATOM 576 CB ALA 74 23.615 19.979 8.746 1.00 0.00 C ATOM 577 C ALA 74 25.488 18.779 7.714 1.00 0.00 C ATOM 578 O ALA 74 26.375 19.426 8.272 1.00 0.00 O ATOM 579 N TYR 75 25.643 18.244 6.485 1.00 0.00 N ATOM 580 CA TYR 75 26.893 18.267 5.791 1.00 0.00 C ATOM 581 CB TYR 75 27.113 17.086 4.821 1.00 0.00 C ATOM 582 CG TYR 75 26.731 15.776 5.428 1.00 0.00 C ATOM 583 CD1 TYR 75 25.413 15.384 5.378 1.00 0.00 C ATOM 584 CD2 TYR 75 27.650 14.933 6.016 1.00 0.00 C ATOM 585 CE1 TYR 75 25.010 14.184 5.913 1.00 0.00 C ATOM 586 CE2 TYR 75 27.251 13.729 6.555 1.00 0.00 C ATOM 587 CZ TYR 75 25.927 13.352 6.506 1.00 0.00 C ATOM 588 OH TYR 75 25.511 12.120 7.055 1.00 0.00 H ATOM 589 C TYR 75 26.832 19.422 4.853 1.00 0.00 C ATOM 590 O TYR 75 25.808 19.654 4.210 1.00 0.00 O ATOM 591 N GLU 76 27.904 20.228 4.793 1.00 0.00 N ATOM 592 CA GLU 76 27.949 21.151 3.704 1.00 0.00 C ATOM 593 CB GLU 76 27.716 22.618 4.101 1.00 0.00 C ATOM 594 CG GLU 76 26.818 23.422 3.147 1.00 0.00 C ATOM 595 CD GLU 76 27.501 23.765 1.831 1.00 0.00 C ATOM 596 OE1 GLU 76 27.731 22.836 1.014 1.00 0.00 O ATOM 597 OE2 GLU 76 27.772 24.975 1.610 1.00 0.00 O ATOM 598 C GLU 76 29.333 20.941 3.178 1.00 0.00 C ATOM 599 O GLU 76 30.213 20.492 3.913 1.00 0.00 O ATOM 600 N TYR 77 29.550 21.163 1.871 1.00 0.00 N ATOM 601 CA TYR 77 30.843 20.858 1.337 1.00 0.00 C ATOM 602 CB TYR 77 30.796 19.663 0.380 1.00 0.00 C ATOM 603 CG TYR 77 29.829 18.652 0.890 1.00 0.00 C ATOM 604 CD1 TYR 77 30.191 17.655 1.763 1.00 0.00 C ATOM 605 CD2 TYR 77 28.522 18.723 0.466 1.00 0.00 C ATOM 606 CE1 TYR 77 29.261 16.737 2.197 1.00 0.00 C ATOM 607 CE2 TYR 77 27.588 17.813 0.893 1.00 0.00 C ATOM 608 CZ TYR 77 27.960 16.816 1.760 1.00 0.00 C ATOM 609 OH TYR 77 27.006 15.875 2.200 1.00 0.00 H ATOM 610 C TYR 77 31.170 21.972 0.390 1.00 0.00 C ATOM 611 O TYR 77 30.543 22.053 -0.664 1.00 0.00 O ATOM 612 N THR 78 32.171 22.833 0.663 1.00 0.00 N ATOM 613 CA THR 78 32.355 23.871 -0.317 1.00 0.00 C ATOM 614 CB THR 78 31.702 25.166 0.074 1.00 0.00 C ATOM 615 OG1 THR 78 32.261 25.649 1.287 1.00 0.00 O ATOM 616 CG2 THR 78 30.190 24.928 0.239 1.00 0.00 C ATOM 617 C THR 78 33.809 24.159 -0.554 1.00 0.00 C ATOM 618 O THR 78 34.472 24.716 0.303 1.00 0.00 O ATOM 619 N LEU 79 34.378 23.877 -1.739 1.00 0.00 N ATOM 620 CA LEU 79 35.787 24.149 -1.808 1.00 0.00 C ATOM 621 CB LEU 79 36.558 22.891 -2.257 1.00 0.00 C ATOM 622 CG LEU 79 37.994 22.792 -1.713 1.00 0.00 C ATOM 623 CD1 LEU 79 37.940 22.413 -0.224 1.00 0.00 C ATOM 624 CD2 LEU 79 38.863 21.799 -2.492 1.00 0.00 C ATOM 625 C LEU 79 35.948 25.224 -2.851 1.00 0.00 C ATOM 626 O LEU 79 35.743 24.971 -4.036 1.00 0.00 O ATOM 627 N GLU 80 36.352 26.451 -2.459 1.00 0.00 N ATOM 628 CA GLU 80 36.354 27.507 -3.439 1.00 0.00 C ATOM 629 CB GLU 80 36.001 28.874 -2.832 1.00 0.00 C ATOM 630 CG GLU 80 34.652 28.865 -2.104 1.00 0.00 C ATOM 631 CD GLU 80 33.574 28.361 -3.053 1.00 0.00 C ATOM 632 OE1 GLU 80 33.815 28.379 -4.289 1.00 0.00 O ATOM 633 OE2 GLU 80 32.493 27.953 -2.553 1.00 0.00 O ATOM 634 C GLU 80 37.707 27.610 -4.074 1.00 0.00 C ATOM 635 O GLU 80 38.667 28.067 -3.457 1.00 0.00 O ATOM 636 N ILE 81 37.805 27.203 -5.354 1.00 0.00 N ATOM 637 CA ILE 81 39.064 27.250 -6.037 1.00 0.00 C ATOM 638 CB ILE 81 39.476 25.897 -6.546 1.00 0.00 C ATOM 639 CG2 ILE 81 40.734 26.056 -7.417 1.00 0.00 C ATOM 640 CG1 ILE 81 39.657 24.930 -5.363 1.00 0.00 C ATOM 641 CD1 ILE 81 40.729 25.373 -4.369 1.00 0.00 C ATOM 642 C ILE 81 38.936 28.170 -7.209 1.00 0.00 C ATOM 643 O ILE 81 38.223 27.885 -8.169 1.00 0.00 O ATOM 644 N ASN 82 39.652 29.308 -7.149 1.00 0.00 N ATOM 645 CA ASN 82 39.678 30.277 -8.206 1.00 0.00 C ATOM 646 CB ASN 82 40.355 29.764 -9.494 1.00 0.00 C ATOM 647 CG ASN 82 41.840 29.586 -9.209 1.00 0.00 C ATOM 648 OD1 ASN 82 42.374 30.160 -8.261 1.00 0.00 O ATOM 649 ND2 ASN 82 42.532 28.772 -10.052 1.00 0.00 N ATOM 650 C ASN 82 38.287 30.715 -8.542 1.00 0.00 C ATOM 651 O ASN 82 38.000 31.030 -9.695 1.00 0.00 O ATOM 652 N GLY 83 37.382 30.759 -7.545 1.00 0.00 N ATOM 653 CA GLY 83 36.063 31.272 -7.794 1.00 0.00 C ATOM 654 C GLY 83 35.159 30.178 -8.269 1.00 0.00 C ATOM 655 O GLY 83 33.954 30.385 -8.401 1.00 0.00 O ATOM 656 N LYS 84 35.694 28.970 -8.521 1.00 0.00 N ATOM 657 CA LYS 84 34.825 27.940 -9.014 1.00 0.00 C ATOM 658 CB LYS 84 35.547 26.865 -9.844 1.00 0.00 C ATOM 659 CG LYS 84 36.175 27.393 -11.136 1.00 0.00 C ATOM 660 CD LYS 84 37.141 26.401 -11.786 1.00 0.00 C ATOM 661 CE LYS 84 38.399 26.148 -10.954 1.00 0.00 C ATOM 662 NZ LYS 84 39.216 25.089 -11.585 1.00 0.00 N ATOM 663 C LYS 84 34.222 27.243 -7.843 1.00 0.00 C ATOM 664 O LYS 84 34.929 26.775 -6.952 1.00 0.00 O ATOM 665 N SER 85 32.878 27.153 -7.821 1.00 0.00 N ATOM 666 CA SER 85 32.244 26.454 -6.749 1.00 0.00 C ATOM 667 CB SER 85 30.869 27.025 -6.371 1.00 0.00 C ATOM 668 OG SER 85 31.022 28.319 -5.809 1.00 0.00 O ATOM 669 C SER 85 32.044 25.049 -7.209 1.00 0.00 C ATOM 670 O SER 85 30.936 24.621 -7.532 1.00 0.00 O ATOM 671 N LEU 86 33.156 24.295 -7.198 1.00 0.00 N ATOM 672 CA LEU 86 33.219 22.899 -7.507 1.00 0.00 C ATOM 673 CB LEU 86 34.658 22.372 -7.639 1.00 0.00 C ATOM 674 CG LEU 86 35.363 22.939 -8.887 1.00 0.00 C ATOM 675 CD1 LEU 86 36.795 22.411 -9.029 1.00 0.00 C ATOM 676 CD2 LEU 86 34.518 22.693 -10.148 1.00 0.00 C ATOM 677 C LEU 86 32.509 22.220 -6.385 1.00 0.00 C ATOM 678 O LEU 86 32.093 21.066 -6.472 1.00 0.00 O ATOM 679 N LYS 87 32.345 22.991 -5.299 1.00 0.00 N ATOM 680 CA LYS 87 31.763 22.633 -4.047 1.00 0.00 C ATOM 681 CB LYS 87 31.595 23.862 -3.148 1.00 0.00 C ATOM 682 CG LYS 87 30.617 24.927 -3.646 1.00 0.00 C ATOM 683 CD LYS 87 30.358 26.010 -2.599 1.00 0.00 C ATOM 684 CE LYS 87 29.607 27.233 -3.119 1.00 0.00 C ATOM 685 NZ LYS 87 29.683 28.319 -2.115 1.00 0.00 N ATOM 686 C LYS 87 30.414 22.016 -4.242 1.00 0.00 C ATOM 687 O LYS 87 29.998 21.187 -3.435 1.00 0.00 O ATOM 688 N LYS 88 29.704 22.372 -5.324 1.00 0.00 N ATOM 689 CA LYS 88 28.378 21.872 -5.551 1.00 0.00 C ATOM 690 CB LYS 88 27.805 22.324 -6.903 1.00 0.00 C ATOM 691 CG LYS 88 26.324 21.995 -7.077 1.00 0.00 C ATOM 692 CD LYS 88 25.685 22.771 -8.225 1.00 0.00 C ATOM 693 CE LYS 88 25.776 24.284 -8.032 1.00 0.00 C ATOM 694 NZ LYS 88 25.305 24.971 -9.252 1.00 0.00 N ATOM 695 C LYS 88 28.422 20.373 -5.541 1.00 0.00 C ATOM 696 O LYS 88 27.426 19.720 -5.228 1.00 0.00 O ATOM 697 N TYR 89 29.570 19.790 -5.931 1.00 0.00 N ATOM 698 CA TYR 89 29.760 18.368 -5.893 1.00 0.00 C ATOM 699 CB TYR 89 31.229 18.034 -6.226 1.00 0.00 C ATOM 700 CG TYR 89 31.603 16.610 -5.998 1.00 0.00 C ATOM 701 CD1 TYR 89 31.277 15.620 -6.897 1.00 0.00 C ATOM 702 CD2 TYR 89 32.334 16.277 -4.881 1.00 0.00 C ATOM 703 CE1 TYR 89 31.654 14.316 -6.667 1.00 0.00 C ATOM 704 CE2 TYR 89 32.715 14.978 -4.646 1.00 0.00 C ATOM 705 CZ TYR 89 32.374 13.994 -5.540 1.00 0.00 C ATOM 706 OH TYR 89 32.770 12.661 -5.298 1.00 0.00 H ATOM 707 C TYR 89 29.430 17.928 -4.501 1.00 0.00 C ATOM 708 O TYR 89 29.970 18.447 -3.524 1.00 0.00 O ATOM 709 N MET 90 28.506 16.956 -4.371 1.00 0.00 N ATOM 710 CA MET 90 28.120 16.554 -3.052 1.00 0.00 C ATOM 711 CB MET 90 26.906 17.342 -2.533 1.00 0.00 C ATOM 712 CG MET 90 27.223 18.834 -2.385 1.00 0.00 C ATOM 713 SD MET 90 25.825 19.885 -1.889 1.00 0.00 S ATOM 714 CE MET 90 26.732 21.451 -2.059 1.00 0.00 C ATOM 715 C MET 90 27.767 15.076 -3.066 1.00 0.00 C ATOM 716 O MET 90 27.214 14.599 -2.039 1.00 0.00 O ATOM 717 OXT MET 90 28.050 14.407 -4.094 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.86 47.8 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 66.25 50.8 118 100.0 118 ARMSMC SURFACE . . . . . . . . 83.65 41.7 108 100.0 108 ARMSMC BURIED . . . . . . . . 61.96 57.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.40 41.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 93.61 40.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 87.37 50.0 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 102.40 27.3 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 78.88 61.3 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.79 45.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 76.40 45.7 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 85.65 35.9 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 78.33 48.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 79.46 40.9 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.71 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 80.71 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 68.61 35.3 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 71.77 38.9 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 102.98 33.3 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.78 61.5 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 82.78 61.5 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 79.45 70.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 82.41 63.6 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 84.81 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.40 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.40 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0489 CRMSCA SECONDARY STRUCTURE . . 2.93 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.15 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.85 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.44 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.09 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.17 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.96 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.54 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.71 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.50 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.92 204 100.0 204 CRMSSC BURIED . . . . . . . . 3.98 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.51 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.85 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.54 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.52 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.608 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.596 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.276 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.558 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.678 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.741 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.335 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.656 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.262 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 5.379 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.827 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.611 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 3.451 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.406 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.267 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.336 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 3.056 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 28 45 68 88 90 90 DISTCA CA (P) 5.56 31.11 50.00 75.56 97.78 90 DISTCA CA (RMS) 0.67 1.44 1.88 2.64 4.05 DISTCA ALL (N) 29 168 309 506 667 716 716 DISTALL ALL (P) 4.05 23.46 43.16 70.67 93.16 716 DISTALL ALL (RMS) 0.70 1.48 2.03 2.91 4.40 DISTALL END of the results output