####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS088_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS088_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.71 4.71 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 4 - 40 1.86 4.96 LCS_AVERAGE: 34.53 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 14 - 40 0.90 5.25 LCS_AVERAGE: 15.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 90 3 3 4 4 6 16 21 28 54 62 74 78 81 82 82 87 87 87 87 87 LCS_GDT T 2 T 2 4 5 90 3 3 15 20 26 35 45 61 69 72 76 78 82 85 86 87 87 87 87 87 LCS_GDT D 3 D 3 4 7 90 3 9 15 23 33 35 52 61 69 74 76 78 82 85 86 87 87 87 87 87 LCS_GDT L 4 L 4 4 37 90 3 3 10 32 49 61 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 5 V 5 7 37 90 5 9 31 47 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 6 A 6 7 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 7 V 7 7 37 90 9 25 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT W 8 W 8 7 37 90 9 21 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT D 9 D 9 7 37 90 7 21 39 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 10 V 10 7 37 90 9 25 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 11 A 11 7 37 90 4 15 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT L 12 L 12 6 37 90 4 5 8 16 22 57 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT S 13 S 13 6 37 90 4 5 7 11 17 26 34 51 60 67 75 78 81 85 86 87 87 87 87 87 LCS_GDT D 14 D 14 27 37 90 7 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 15 G 15 27 37 90 7 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 16 V 16 27 37 90 12 24 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT H 17 H 17 27 37 90 5 23 35 45 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 18 K 18 27 37 90 4 20 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 19 I 19 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 20 E 20 27 37 90 6 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT F 21 F 21 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 22 E 22 27 37 90 7 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT H 23 H 23 27 37 90 5 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 24 G 24 27 37 90 4 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 25 T 25 27 37 90 4 14 33 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 26 T 26 27 37 90 12 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT S 27 S 27 27 37 90 5 27 36 47 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 28 G 28 27 37 90 10 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 29 K 29 27 37 90 12 27 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT R 30 R 30 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 31 V 31 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 32 V 32 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT Y 33 Y 33 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 34 V 34 27 37 90 9 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT D 35 D 35 27 37 90 6 23 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 36 G 36 27 37 90 12 26 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 37 K 37 27 37 90 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 38 E 38 27 37 90 11 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 39 E 39 27 37 90 7 27 37 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 40 I 40 27 37 90 6 23 36 46 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT R 41 R 41 5 30 90 1 4 6 8 13 20 28 47 55 72 78 79 81 84 86 87 87 87 87 87 LCS_GDT K 42 K 42 5 30 90 3 6 11 16 28 38 45 57 71 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 43 E 43 5 30 90 3 8 18 28 38 47 53 66 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT W 44 W 44 5 13 90 4 4 10 14 27 39 46 52 61 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT M 45 M 45 5 8 90 4 5 10 18 32 39 46 55 66 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT F 46 F 46 4 8 90 4 5 18 28 37 47 53 66 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 47 K 47 4 8 90 4 8 18 38 45 55 66 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT L 48 L 48 4 10 90 3 4 8 13 27 32 41 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 49 V 49 9 34 90 3 11 40 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 50 G 50 9 34 90 3 19 38 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 51 K 51 9 34 90 7 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 52 E 52 9 34 90 7 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 53 T 53 9 34 90 7 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT F 54 F 54 9 34 90 7 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT Y 55 Y 55 9 34 90 7 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT V 56 V 56 9 34 90 3 13 40 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 57 G 57 9 34 90 4 13 31 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 58 A 58 4 34 90 3 3 5 19 31 50 58 66 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 59 A 59 3 34 90 3 19 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 60 K 60 3 34 90 3 5 26 47 60 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 61 T 61 10 34 90 6 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT K 62 K 62 10 34 90 5 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 63 A 63 10 34 90 7 20 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 64 T 64 10 34 90 10 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 65 I 65 10 34 90 10 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT N 66 N 66 10 34 90 6 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 67 I 67 10 34 90 6 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT D 68 D 68 10 34 90 6 26 35 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT A 69 A 69 10 34 90 7 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 70 I 70 10 34 90 8 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT S 71 S 71 5 34 90 10 23 36 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT G 72 G 72 3 34 90 3 3 12 35 42 60 65 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT F 73 F 73 13 34 90 7 24 41 53 63 65 67 69 73 75 78 79 81 85 86 87 87 87 87 87 LCS_GDT A 74 A 74 13 34 90 10 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT Y 75 Y 75 13 34 90 10 26 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 76 E 76 13 34 90 6 26 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT Y 77 Y 77 13 34 90 6 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT T 78 T 78 13 34 90 6 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT L 79 L 79 13 34 90 10 24 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT E 80 E 80 13 34 90 10 20 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT I 81 I 81 13 34 90 10 20 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT N 82 N 82 13 34 90 5 8 14 26 42 55 64 69 72 74 76 78 82 85 86 87 87 87 87 87 LCS_GDT G 83 G 83 13 27 90 5 7 13 18 27 39 54 62 72 74 76 78 81 85 86 87 87 87 87 87 LCS_GDT K 84 K 84 13 27 90 5 9 17 27 40 55 64 69 72 74 76 78 82 85 86 87 87 87 87 87 LCS_GDT S 85 S 85 13 27 90 7 13 26 45 54 65 66 69 72 75 78 79 82 85 86 87 87 87 87 87 LCS_GDT L 86 L 86 3 18 90 2 6 15 24 38 55 65 69 72 74 77 79 82 85 86 87 87 87 87 87 LCS_GDT K 87 K 87 3 10 90 1 3 4 5 11 18 23 33 48 59 66 78 82 85 86 87 87 87 87 87 LCS_GDT K 88 K 88 3 3 90 0 3 3 3 3 4 5 6 7 13 17 20 25 31 42 59 63 67 71 83 LCS_GDT Y 89 Y 89 3 3 90 0 3 3 3 3 4 5 5 6 6 7 8 19 20 21 24 31 40 41 65 LCS_GDT M 90 M 90 3 3 90 0 3 3 3 3 3 4 4 5 11 14 16 19 20 24 32 36 43 54 56 LCS_AVERAGE LCS_A: 49.89 ( 15.14 34.53 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 27 41 53 63 65 67 69 73 75 78 79 82 85 86 87 87 87 87 87 GDT PERCENT_AT 13.33 30.00 45.56 58.89 70.00 72.22 74.44 76.67 81.11 83.33 86.67 87.78 91.11 94.44 95.56 96.67 96.67 96.67 96.67 96.67 GDT RMS_LOCAL 0.41 0.72 1.05 1.32 1.56 1.61 1.76 1.90 2.30 2.43 2.72 2.77 3.17 3.31 3.39 3.51 3.51 3.51 3.51 3.51 GDT RMS_ALL_AT 5.22 5.24 5.05 5.03 5.00 5.00 4.99 4.95 4.98 4.97 5.01 4.97 4.80 4.79 4.79 4.78 4.78 4.78 4.78 4.78 # Checking swapping # possible swapping detected: E 20 E 20 # possible swapping detected: E 22 E 22 # possible swapping detected: Y 33 Y 33 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: E 52 E 52 # possible swapping detected: F 73 F 73 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 9.413 0 0.104 1.440 13.451 3.095 1.548 LGA T 2 T 2 8.487 0 0.246 1.113 13.121 8.214 4.694 LGA D 3 D 3 7.315 0 0.423 0.393 11.148 15.595 8.452 LGA L 4 L 4 4.211 0 0.583 1.411 10.314 44.167 26.012 LGA V 5 V 5 2.397 0 0.611 0.981 6.618 71.310 48.844 LGA A 6 A 6 0.697 0 0.100 0.131 1.022 90.595 88.762 LGA V 7 V 7 0.376 0 0.107 1.081 2.589 95.238 87.279 LGA W 8 W 8 0.809 0 0.093 0.125 1.271 85.952 89.932 LGA D 9 D 9 1.491 0 0.263 1.049 4.062 81.429 67.857 LGA V 10 V 10 0.512 0 0.131 1.171 2.777 88.214 83.129 LGA A 11 A 11 1.287 0 0.110 0.104 3.252 69.762 70.381 LGA L 12 L 12 4.651 0 0.183 0.276 5.935 31.071 31.369 LGA S 13 S 13 7.205 0 0.422 0.587 9.326 16.667 11.587 LGA D 14 D 14 1.772 0 0.155 1.202 4.118 66.905 56.905 LGA G 15 G 15 1.730 0 0.111 0.111 1.816 72.857 72.857 LGA V 16 V 16 1.810 0 0.169 1.215 3.692 63.452 61.020 LGA H 17 H 17 2.528 0 0.110 1.140 6.718 71.310 47.238 LGA K 18 K 18 1.870 0 0.050 0.782 4.361 68.810 56.984 LGA I 19 I 19 0.970 0 0.146 0.181 1.131 85.952 88.214 LGA E 20 E 20 1.046 0 0.269 0.520 1.924 83.690 81.481 LGA F 21 F 21 0.543 0 0.078 0.207 0.975 92.857 92.208 LGA E 22 E 22 1.010 0 0.164 0.636 3.398 88.214 81.005 LGA H 23 H 23 0.896 0 0.061 0.895 2.169 83.810 79.095 LGA G 24 G 24 1.991 0 0.072 0.072 1.991 77.143 77.143 LGA T 25 T 25 1.976 0 0.235 0.242 4.376 72.976 59.456 LGA T 26 T 26 2.261 0 0.122 1.148 3.958 64.762 62.857 LGA S 27 S 27 2.754 0 0.044 0.128 3.097 59.048 57.222 LGA G 28 G 28 1.752 0 0.207 0.207 2.013 70.833 70.833 LGA K 29 K 29 1.789 0 0.216 0.678 7.030 72.976 54.286 LGA R 30 R 30 0.785 0 0.162 0.821 3.813 79.524 71.558 LGA V 31 V 31 0.752 0 0.139 0.294 1.757 90.595 88.027 LGA V 32 V 32 0.254 0 0.123 0.108 0.984 97.619 94.558 LGA Y 33 Y 33 0.305 0 0.173 0.290 2.842 92.976 80.516 LGA V 34 V 34 0.635 0 0.081 0.091 0.891 92.857 93.197 LGA D 35 D 35 1.289 0 0.132 0.878 2.812 79.286 72.202 LGA G 36 G 36 0.443 0 0.168 0.168 0.765 95.238 95.238 LGA K 37 K 37 0.553 0 0.094 0.198 1.461 92.857 90.529 LGA E 38 E 38 1.105 0 0.032 0.544 2.672 90.595 81.852 LGA E 39 E 39 1.319 0 0.577 0.590 3.261 69.405 66.825 LGA I 40 I 40 2.663 0 0.644 0.545 6.893 40.357 52.202 LGA R 41 R 41 7.790 0 0.560 0.988 18.790 10.714 3.939 LGA K 42 K 42 7.236 0 0.111 0.975 7.787 10.000 11.323 LGA E 43 E 43 7.214 0 0.260 1.242 10.955 7.976 5.291 LGA W 44 W 44 8.183 0 0.068 1.387 9.038 7.976 5.680 LGA M 45 M 45 8.125 0 0.159 0.721 8.343 5.357 5.714 LGA F 46 F 46 7.139 0 0.581 0.605 8.893 8.214 8.182 LGA K 47 K 47 5.589 0 0.057 1.224 5.641 26.429 26.931 LGA L 48 L 48 6.036 0 0.126 0.261 12.000 25.476 13.690 LGA V 49 V 49 2.284 0 0.678 0.599 4.318 54.167 54.558 LGA G 50 G 50 2.496 0 0.254 0.254 2.496 70.833 70.833 LGA K 51 K 51 1.759 0 0.071 0.641 2.155 70.833 70.159 LGA E 52 E 52 1.491 0 0.204 0.706 1.813 81.429 79.524 LGA T 53 T 53 1.682 0 0.111 0.156 2.426 72.857 69.388 LGA F 54 F 54 1.820 0 0.189 0.298 1.820 72.857 79.177 LGA Y 55 Y 55 1.700 0 0.107 1.457 9.583 72.857 44.087 LGA V 56 V 56 1.694 0 0.019 0.072 2.427 72.857 70.544 LGA G 57 G 57 2.122 0 0.621 0.621 2.343 64.762 64.762 LGA A 58 A 58 4.794 0 0.624 0.564 6.951 37.381 32.571 LGA A 59 A 59 1.166 0 0.566 0.530 2.601 86.071 80.286 LGA K 60 K 60 2.626 0 0.119 0.798 10.704 64.881 40.423 LGA T 61 T 61 1.363 0 0.037 0.167 2.264 79.286 76.599 LGA K 62 K 62 1.710 0 0.048 0.823 9.438 71.071 44.286 LGA A 63 A 63 1.382 0 0.093 0.094 1.752 83.690 81.524 LGA T 64 T 64 1.293 0 0.069 1.077 2.885 79.286 74.286 LGA I 65 I 65 0.406 0 0.071 0.144 1.546 90.595 87.202 LGA N 66 N 66 1.560 0 0.170 0.886 3.955 77.262 64.821 LGA I 67 I 67 1.674 0 0.061 0.116 2.242 68.810 72.976 LGA D 68 D 68 2.626 0 0.297 1.063 5.456 60.952 48.810 LGA A 69 A 69 1.742 0 0.107 0.139 2.152 75.119 74.667 LGA I 70 I 70 1.356 0 0.309 1.053 3.949 79.524 72.500 LGA S 71 S 71 1.498 0 0.597 0.570 3.925 70.000 72.381 LGA G 72 G 72 4.366 0 0.146 0.146 4.366 50.476 50.476 LGA F 73 F 73 2.786 0 0.346 1.576 8.449 61.429 34.026 LGA A 74 A 74 2.214 0 0.079 0.121 2.376 66.786 66.381 LGA Y 75 Y 75 1.737 0 0.121 0.267 1.840 72.857 72.857 LGA E 76 E 76 1.907 0 0.131 0.818 3.695 70.833 60.317 LGA Y 77 Y 77 1.735 0 0.075 0.112 1.753 72.857 72.857 LGA T 78 T 78 1.439 0 0.063 1.056 2.906 83.810 76.871 LGA L 79 L 79 0.899 0 0.160 1.447 3.235 83.810 76.607 LGA E 80 E 80 1.564 0 0.166 0.809 4.868 75.000 64.021 LGA I 81 I 81 1.798 0 0.090 0.115 3.739 59.762 66.369 LGA N 82 N 82 4.949 0 0.100 0.205 7.000 26.548 29.762 LGA G 83 G 83 6.231 0 0.026 0.026 6.431 19.286 19.286 LGA K 84 K 84 5.296 0 0.202 0.733 8.746 36.667 20.741 LGA S 85 S 85 3.315 0 0.120 0.531 5.115 37.619 48.175 LGA L 86 L 86 5.045 0 0.651 0.524 7.880 24.167 24.821 LGA K 87 K 87 8.834 0 0.616 0.733 11.761 4.048 10.741 LGA K 88 K 88 15.893 0 0.621 0.855 19.689 0.000 0.000 LGA Y 89 Y 89 19.666 0 0.672 1.413 23.226 0.000 0.000 LGA M 90 M 90 20.538 0 0.429 1.174 22.690 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.709 4.732 5.586 60.263 55.631 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 69 1.90 65.556 61.537 3.459 LGA_LOCAL RMSD: 1.895 Number of atoms: 69 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.952 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.709 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.237367 * X + 0.884587 * Y + 0.401451 * Z + 30.353512 Y_new = 0.732324 * X + 0.434471 * Y + -0.524344 * Z + 14.257574 Z_new = -0.638246 * X + 0.169530 * Y + -0.750934 * Z + -4.361942 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.884240 0.692218 2.919556 [DEG: 107.9590 39.6612 167.2782 ] ZXZ: 0.653426 2.420271 -1.311173 [DEG: 37.4386 138.6713 -75.1247 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS088_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS088_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 69 1.90 61.537 4.71 REMARK ---------------------------------------------------------- MOLECULE T0540TS088_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 1 N MET 1 30.452 6.408 7.332 1.00 0.00 N ATOM 2 CA MET 1 29.471 6.112 6.293 1.00 0.00 C ATOM 3 C MET 1 29.024 7.433 5.607 1.00 0.00 C ATOM 4 O MET 1 27.972 7.966 6.008 1.00 0.00 O ATOM 5 CB MET 1 28.330 5.321 6.963 1.00 0.00 C ATOM 6 CG MET 1 28.684 3.862 7.202 1.00 0.00 C ATOM 7 SD MET 1 28.975 2.809 5.697 1.00 0.00 S ATOM 8 CE MET 1 30.715 2.844 5.415 1.00 0.00 C ATOM 9 N THR 2 29.772 7.931 4.604 1.00 0.00 N ATOM 10 CA THR 2 29.341 9.112 3.859 1.00 0.00 C ATOM 11 C THR 2 29.294 10.446 4.708 1.00 0.00 C ATOM 12 O THR 2 30.179 11.262 4.476 1.00 0.00 O ATOM 13 CB THR 2 28.042 8.893 3.011 1.00 0.00 C ATOM 14 OG1 THR 2 28.004 7.853 2.094 1.00 0.00 O ATOM 15 CG2 THR 2 27.555 10.213 2.325 1.00 0.00 C ATOM 16 N ASP 3 28.112 10.839 5.225 1.00 0.00 N ATOM 17 CA ASP 3 27.840 12.107 5.959 1.00 0.00 C ATOM 18 C ASP 3 29.129 12.953 6.343 1.00 0.00 C ATOM 19 O ASP 3 29.161 14.113 5.943 1.00 0.00 O ATOM 20 CB ASP 3 27.041 11.730 7.209 1.00 0.00 C ATOM 21 CG ASP 3 25.628 11.272 6.976 1.00 0.00 C ATOM 22 OD1 ASP 3 25.174 11.379 5.860 1.00 0.00 O ATOM 23 OD2 ASP 3 25.065 10.658 7.850 1.00 0.00 O ATOM 24 N LEU 4 30.165 12.400 7.045 1.00 0.00 N ATOM 25 CA LEU 4 31.410 13.146 7.351 1.00 0.00 C ATOM 26 C LEU 4 32.360 13.330 6.094 1.00 0.00 C ATOM 27 O LEU 4 32.673 14.475 5.763 1.00 0.00 O ATOM 28 CB LEU 4 32.143 12.343 8.474 1.00 0.00 C ATOM 29 CG LEU 4 31.375 12.174 9.764 1.00 0.00 C ATOM 30 CD1 LEU 4 32.199 11.364 10.754 1.00 0.00 C ATOM 31 CD2 LEU 4 31.008 13.529 10.347 1.00 0.00 C ATOM 32 N VAL 5 32.772 12.239 5.413 1.00 0.00 N ATOM 33 CA VAL 5 33.708 12.215 4.300 1.00 0.00 C ATOM 34 C VAL 5 33.028 12.650 2.971 1.00 0.00 C ATOM 35 O VAL 5 32.073 11.998 2.492 1.00 0.00 O ATOM 36 CB VAL 5 34.251 10.798 4.124 1.00 0.00 C ATOM 37 CG1 VAL 5 35.209 10.752 2.885 1.00 0.00 C ATOM 38 CG2 VAL 5 34.936 10.331 5.366 1.00 0.00 C ATOM 39 N ALA 6 33.589 13.711 2.344 1.00 0.00 N ATOM 40 CA ALA 6 33.108 14.357 1.114 1.00 0.00 C ATOM 41 C ALA 6 34.283 14.740 0.170 1.00 0.00 C ATOM 42 O ALA 6 35.179 15.530 0.543 1.00 0.00 O ATOM 43 CB ALA 6 32.296 15.586 1.562 1.00 0.00 C ATOM 44 N VAL 7 34.084 14.404 -1.109 1.00 0.00 N ATOM 45 CA VAL 7 35.055 14.594 -2.189 1.00 0.00 C ATOM 46 C VAL 7 34.496 15.515 -3.313 1.00 0.00 C ATOM 47 O VAL 7 33.411 15.261 -3.859 1.00 0.00 O ATOM 48 CB VAL 7 35.444 13.218 -2.775 1.00 0.00 C ATOM 49 CG1 VAL 7 36.165 12.376 -1.760 1.00 0.00 C ATOM 50 CG2 VAL 7 34.227 12.507 -3.333 1.00 0.00 C ATOM 51 N TRP 8 35.408 16.322 -3.854 1.00 0.00 N ATOM 52 CA TRP 8 35.144 17.229 -4.960 1.00 0.00 C ATOM 53 C TRP 8 36.160 16.939 -6.126 1.00 0.00 C ATOM 54 O TRP 8 37.378 17.115 -5.968 1.00 0.00 O ATOM 55 CB TRP 8 35.254 18.692 -4.526 1.00 0.00 C ATOM 56 CG TRP 8 34.354 19.016 -3.377 1.00 0.00 C ATOM 57 CD1 TRP 8 33.106 19.561 -3.453 1.00 0.00 C ATOM 58 CD2 TRP 8 34.627 18.827 -1.982 1.00 0.00 C ATOM 59 NE1 TRP 8 32.584 19.723 -2.195 1.00 0.00 N ATOM 60 CE2 TRP 8 33.498 19.279 -1.273 1.00 0.00 C ATOM 61 CE3 TRP 8 35.715 18.318 -1.266 1.00 0.00 C ATOM 62 CZ2 TRP 8 33.428 19.241 0.110 1.00 0.00 C ATOM 63 CZ3 TRP 8 35.643 18.279 0.121 1.00 0.00 C ATOM 64 CH2 TRP 8 34.532 18.727 0.790 1.00 0.00 H ATOM 65 N ASP 9 35.618 16.633 -7.309 1.00 0.00 N ATOM 66 CA ASP 9 36.410 16.330 -8.492 1.00 0.00 C ATOM 67 C ASP 9 36.793 17.647 -9.203 1.00 0.00 C ATOM 68 O ASP 9 36.205 17.942 -10.248 1.00 0.00 O ATOM 69 CB ASP 9 35.674 15.309 -9.380 1.00 0.00 C ATOM 70 CG ASP 9 36.497 14.912 -10.612 1.00 0.00 C ATOM 71 OD1 ASP 9 37.585 15.404 -10.786 1.00 0.00 O ATOM 72 OD2 ASP 9 36.093 13.978 -11.261 1.00 0.00 O ATOM 73 N VAL 10 38.044 18.129 -9.006 1.00 0.00 N ATOM 74 CA VAL 10 38.518 19.425 -9.531 1.00 0.00 C ATOM 75 C VAL 10 40.044 19.422 -9.804 1.00 0.00 C ATOM 76 O VAL 10 40.820 18.836 -9.038 1.00 0.00 O ATOM 77 CB VAL 10 38.115 20.553 -8.564 1.00 0.00 C ATOM 78 CG1 VAL 10 38.873 20.407 -7.249 1.00 0.00 C ATOM 79 CG2 VAL 10 38.481 21.910 -9.206 1.00 0.00 C ATOM 80 N ALA 11 40.457 20.128 -10.880 1.00 0.00 N ATOM 81 CA ALA 11 41.826 20.250 -11.326 1.00 0.00 C ATOM 82 C ALA 11 42.682 20.814 -10.138 1.00 0.00 C ATOM 83 O ALA 11 42.569 21.987 -9.772 1.00 0.00 O ATOM 84 CB ALA 11 41.881 21.153 -12.574 1.00 0.00 C ATOM 85 N LEU 12 43.724 20.030 -9.791 1.00 0.00 N ATOM 86 CA LEU 12 44.634 20.243 -8.664 1.00 0.00 C ATOM 87 C LEU 12 46.065 19.735 -8.993 1.00 0.00 C ATOM 88 O LEU 12 46.274 18.584 -9.406 1.00 0.00 O ATOM 89 CB LEU 12 44.051 19.508 -7.433 1.00 0.00 C ATOM 90 CG LEU 12 42.735 20.047 -6.910 1.00 0.00 C ATOM 91 CD1 LEU 12 42.214 19.150 -5.795 1.00 0.00 C ATOM 92 CD2 LEU 12 42.912 21.475 -6.415 1.00 0.00 C ATOM 93 N SER 13 47.057 20.549 -8.613 1.00 0.00 N ATOM 94 CA SER 13 48.504 20.329 -8.860 1.00 0.00 C ATOM 95 C SER 13 48.823 20.046 -10.385 1.00 0.00 C ATOM 96 O SER 13 49.557 19.083 -10.659 1.00 0.00 O ATOM 97 CB SER 13 49.021 19.186 -7.959 1.00 0.00 C ATOM 98 OG SER 13 48.912 19.353 -6.576 1.00 0.00 O ATOM 99 N ASP 14 48.360 20.868 -11.301 1.00 0.00 N ATOM 100 CA ASP 14 48.536 20.640 -12.758 1.00 0.00 C ATOM 101 C ASP 14 47.973 19.247 -13.252 1.00 0.00 C ATOM 102 O ASP 14 48.611 18.528 -14.036 1.00 0.00 O ATOM 103 CB ASP 14 50.014 20.828 -13.101 1.00 0.00 C ATOM 104 CG ASP 14 50.588 22.179 -12.848 1.00 0.00 C ATOM 105 OD1 ASP 14 49.975 23.147 -13.235 1.00 0.00 O ATOM 106 OD2 ASP 14 51.549 22.263 -12.121 1.00 0.00 O ATOM 107 N GLY 15 46.701 18.941 -12.843 1.00 0.00 N ATOM 108 CA GLY 15 46.007 17.685 -13.088 1.00 0.00 C ATOM 109 C GLY 15 44.609 17.657 -12.402 1.00 0.00 C ATOM 110 O GLY 15 43.931 18.682 -12.465 1.00 0.00 O ATOM 111 N VAL 16 43.992 16.475 -12.494 1.00 0.00 N ATOM 112 CA VAL 16 42.657 16.207 -11.931 1.00 0.00 C ATOM 113 C VAL 16 42.778 15.336 -10.640 1.00 0.00 C ATOM 114 O VAL 16 43.232 14.187 -10.687 1.00 0.00 O ATOM 115 CB VAL 16 41.747 15.465 -12.908 1.00 0.00 C ATOM 116 CG1 VAL 16 40.376 15.106 -12.347 1.00 0.00 C ATOM 117 CG2 VAL 16 41.536 16.359 -14.223 1.00 0.00 C ATOM 118 N HIS 17 42.329 15.915 -9.485 1.00 0.00 N ATOM 119 CA HIS 17 42.413 15.255 -8.213 1.00 0.00 C ATOM 120 C HIS 17 41.161 15.613 -7.335 1.00 0.00 C ATOM 121 O HIS 17 40.772 16.794 -7.234 1.00 0.00 O ATOM 122 CB HIS 17 43.705 15.600 -7.517 1.00 0.00 C ATOM 123 CG HIS 17 44.930 15.220 -8.250 1.00 0.00 C ATOM 124 ND1 HIS 17 45.376 13.917 -8.330 1.00 0.00 N ATOM 125 CD2 HIS 17 45.811 15.961 -8.963 1.00 0.00 C ATOM 126 CE1 HIS 17 46.476 13.875 -9.060 1.00 0.00 C ATOM 127 NE2 HIS 17 46.761 15.101 -9.456 1.00 0.00 N ATOM 128 N LYS 18 40.860 14.692 -6.422 1.00 0.00 N ATOM 129 CA LYS 18 39.730 14.741 -5.498 1.00 0.00 C ATOM 130 C LYS 18 40.205 15.013 -4.048 1.00 0.00 C ATOM 131 O LYS 18 41.053 14.287 -3.504 1.00 0.00 O ATOM 132 CB LYS 18 38.988 13.406 -5.595 1.00 0.00 C ATOM 133 CG LYS 18 38.179 13.324 -6.900 1.00 0.00 C ATOM 134 CD LYS 18 37.341 12.073 -6.930 1.00 0.00 C ATOM 135 CE LYS 18 36.470 11.894 -8.160 1.00 0.00 C ATOM 136 NZ LYS 18 37.331 11.654 -9.386 1.00 0.00 N ATOM 137 N ILE 19 39.416 15.862 -3.372 1.00 0.00 N ATOM 138 CA ILE 19 39.727 16.253 -2.009 1.00 0.00 C ATOM 139 C ILE 19 38.913 15.432 -0.972 1.00 0.00 C ATOM 140 O ILE 19 37.685 15.587 -0.835 1.00 0.00 O ATOM 141 CB ILE 19 39.451 17.775 -1.834 1.00 0.00 C ATOM 142 CG1 ILE 19 40.276 18.593 -2.791 1.00 0.00 C ATOM 143 CG2 ILE 19 39.750 18.167 -0.373 1.00 0.00 C ATOM 144 CD1 ILE 19 39.899 20.056 -2.821 1.00 0.00 C ATOM 145 N GLU 20 39.674 14.711 -0.154 1.00 0.00 N ATOM 146 CA GLU 20 39.139 13.931 0.956 1.00 0.00 C ATOM 147 C GLU 20 38.977 14.847 2.176 1.00 0.00 C ATOM 148 O GLU 20 39.858 14.878 3.010 1.00 0.00 O ATOM 149 CB GLU 20 40.057 12.730 1.269 1.00 0.00 C ATOM 150 CG GLU 20 40.183 11.743 0.142 1.00 0.00 C ATOM 151 CD GLU 20 41.173 10.665 0.486 1.00 0.00 C ATOM 152 OE1 GLU 20 41.771 10.744 1.530 1.00 0.00 O ATOM 153 OE2 GLU 20 41.252 9.705 -0.244 1.00 0.00 O ATOM 154 N PHE 21 37.739 15.287 2.411 1.00 0.00 N ATOM 155 CA PHE 21 37.413 16.085 3.596 1.00 0.00 C ATOM 156 C PHE 21 36.871 15.134 4.700 1.00 0.00 C ATOM 157 O PHE 21 35.755 14.603 4.595 1.00 0.00 O ATOM 158 CB PHE 21 36.447 17.245 3.272 1.00 0.00 C ATOM 159 CG PHE 21 35.971 17.952 4.495 1.00 0.00 C ATOM 160 CD1 PHE 21 36.875 18.565 5.350 1.00 0.00 C ATOM 161 CD2 PHE 21 34.618 18.042 4.785 1.00 0.00 C ATOM 162 CE1 PHE 21 36.438 19.253 6.466 1.00 0.00 C ATOM 163 CE2 PHE 21 34.177 18.730 5.898 1.00 0.00 C ATOM 164 CZ PHE 21 35.089 19.335 6.741 1.00 0.00 C ATOM 165 N GLU 22 37.653 15.028 5.768 1.00 0.00 N ATOM 166 CA GLU 22 37.282 14.251 6.952 1.00 0.00 C ATOM 167 C GLU 22 36.617 15.228 7.975 1.00 0.00 C ATOM 168 O GLU 22 37.311 16.010 8.647 1.00 0.00 O ATOM 169 CB GLU 22 38.497 13.522 7.523 1.00 0.00 C ATOM 170 CG GLU 22 39.055 12.449 6.650 1.00 0.00 C ATOM 171 CD GLU 22 40.127 11.675 7.363 1.00 0.00 C ATOM 172 OE1 GLU 22 40.424 12.001 8.487 1.00 0.00 O ATOM 173 OE2 GLU 22 40.574 10.687 6.827 1.00 0.00 O ATOM 174 N HIS 23 35.296 15.156 8.106 1.00 0.00 N ATOM 175 CA HIS 23 34.480 15.975 8.994 1.00 0.00 C ATOM 176 C HIS 23 34.300 15.266 10.361 1.00 0.00 C ATOM 177 O HIS 23 33.987 14.066 10.415 1.00 0.00 O ATOM 178 CB HIS 23 33.124 16.242 8.290 1.00 0.00 C ATOM 179 CG HIS 23 32.328 17.306 9.027 1.00 0.00 C ATOM 180 ND1 HIS 23 31.584 17.053 10.161 1.00 0.00 N ATOM 181 CD2 HIS 23 32.161 18.620 8.753 1.00 0.00 C ATOM 182 CE1 HIS 23 30.995 18.170 10.554 1.00 0.00 C ATOM 183 NE2 HIS 23 31.329 19.134 9.715 1.00 0.00 N ATOM 184 N GLY 24 34.759 15.960 11.437 1.00 0.00 N ATOM 185 CA GLY 24 34.621 15.405 12.790 1.00 0.00 C ATOM 186 C GLY 24 33.161 15.542 13.298 1.00 0.00 C ATOM 187 O GLY 24 32.606 16.644 13.178 1.00 0.00 O ATOM 188 N THR 25 32.843 14.692 14.293 1.00 0.00 N ATOM 189 CA THR 25 31.437 14.680 14.761 1.00 0.00 C ATOM 190 C THR 25 31.113 15.482 16.055 1.00 0.00 C ATOM 191 O THR 25 30.276 16.377 15.956 1.00 0.00 O ATOM 192 CB THR 25 30.904 13.210 14.844 1.00 0.00 C ATOM 193 OG1 THR 25 31.574 12.413 15.822 1.00 0.00 O ATOM 194 CG2 THR 25 30.690 12.513 13.557 1.00 0.00 C ATOM 195 N THR 26 31.851 15.342 17.152 1.00 0.00 N ATOM 196 CA THR 26 31.591 15.967 18.474 1.00 0.00 C ATOM 197 C THR 26 32.692 16.978 18.960 1.00 0.00 C ATOM 198 O THR 26 32.345 17.866 19.747 1.00 0.00 O ATOM 199 CB THR 26 31.252 14.777 19.433 1.00 0.00 C ATOM 200 OG1 THR 26 32.203 13.711 19.475 1.00 0.00 O ATOM 201 CG2 THR 26 29.841 14.132 19.005 1.00 0.00 C ATOM 202 N SER 27 33.922 16.854 18.506 1.00 0.00 N ATOM 203 CA SER 27 35.001 17.728 18.764 1.00 0.00 C ATOM 204 C SER 27 35.315 18.716 17.579 1.00 0.00 C ATOM 205 O SER 27 36.087 19.635 17.848 1.00 0.00 O ATOM 206 CB SER 27 36.222 16.824 19.043 1.00 0.00 C ATOM 207 OG SER 27 36.857 16.286 17.869 1.00 0.00 O ATOM 208 N GLY 28 34.559 18.739 16.450 1.00 0.00 N ATOM 209 CA GLY 28 34.831 19.564 15.274 1.00 0.00 C ATOM 210 C GLY 28 36.272 19.422 14.714 1.00 0.00 C ATOM 211 O GLY 28 36.850 20.489 14.441 1.00 0.00 O ATOM 212 N LYS 29 36.874 18.238 14.738 1.00 0.00 N ATOM 213 CA LYS 29 38.190 18.108 14.146 1.00 0.00 C ATOM 214 C LYS 29 37.992 17.788 12.637 1.00 0.00 C ATOM 215 O LYS 29 37.883 16.630 12.207 1.00 0.00 O ATOM 216 CB LYS 29 38.999 17.037 14.913 1.00 0.00 C ATOM 217 CG LYS 29 40.425 16.902 14.356 1.00 0.00 C ATOM 218 CD LYS 29 41.229 15.946 15.226 1.00 0.00 C ATOM 219 CE LYS 29 42.635 15.749 14.678 1.00 0.00 C ATOM 220 NZ LYS 29 43.465 14.896 15.570 1.00 0.00 N ATOM 221 N ARG 30 38.181 18.866 11.865 1.00 0.00 N ATOM 222 CA ARG 30 37.994 18.886 10.381 1.00 0.00 C ATOM 223 C ARG 30 39.412 18.909 9.688 1.00 0.00 C ATOM 224 O ARG 30 40.099 19.954 9.612 1.00 0.00 O ATOM 225 CB ARG 30 37.158 20.134 9.920 1.00 0.00 C ATOM 226 CG ARG 30 35.737 20.082 10.451 1.00 0.00 C ATOM 227 CD ARG 30 35.000 21.353 10.240 1.00 0.00 C ATOM 228 NE ARG 30 33.613 21.324 10.675 1.00 0.00 N ATOM 229 CZ ARG 30 33.200 21.547 11.936 1.00 0.00 C ATOM 230 NH1 ARG 30 34.066 21.777 12.900 1.00 0.00 H ATOM 231 NH2 ARG 30 31.903 21.504 12.189 1.00 0.00 H ATOM 232 N VAL 31 39.717 17.737 9.150 1.00 0.00 N ATOM 233 CA VAL 31 40.963 17.386 8.470 1.00 0.00 C ATOM 234 C VAL 31 40.744 17.258 6.985 1.00 0.00 C ATOM 235 O VAL 31 40.290 16.187 6.546 1.00 0.00 O ATOM 236 CB VAL 31 41.422 16.045 9.131 1.00 0.00 C ATOM 237 CG1 VAL 31 42.711 15.439 8.544 1.00 0.00 C ATOM 238 CG2 VAL 31 41.746 16.279 10.638 1.00 0.00 C ATOM 239 N VAL 32 41.387 18.110 6.187 1.00 0.00 N ATOM 240 CA VAL 32 41.258 18.135 4.742 1.00 0.00 C ATOM 241 C VAL 32 42.572 17.563 4.102 1.00 0.00 C ATOM 242 O VAL 32 43.600 18.251 4.026 1.00 0.00 O ATOM 243 CB VAL 32 40.979 19.601 4.290 1.00 0.00 C ATOM 244 CG1 VAL 32 40.844 19.611 2.742 1.00 0.00 C ATOM 245 CG2 VAL 32 39.746 20.157 4.984 1.00 0.00 C ATOM 246 N TYR 33 42.408 16.385 3.461 1.00 0.00 N ATOM 247 CA TYR 33 43.447 15.674 2.710 1.00 0.00 C ATOM 248 C TYR 33 43.224 15.986 1.206 1.00 0.00 C ATOM 249 O TYR 33 42.326 15.391 0.568 1.00 0.00 O ATOM 250 CB TYR 33 43.296 14.175 2.940 1.00 0.00 C ATOM 251 CG TYR 33 43.736 13.750 4.333 1.00 0.00 C ATOM 252 CD1 TYR 33 42.801 13.300 5.254 1.00 0.00 C ATOM 253 CD2 TYR 33 45.068 13.800 4.721 1.00 0.00 C ATOM 254 CE1 TYR 33 43.180 12.915 6.525 1.00 0.00 C ATOM 255 CE2 TYR 33 45.457 13.415 5.990 1.00 0.00 C ATOM 256 CZ TYR 33 44.509 12.974 6.889 1.00 0.00 C ATOM 257 OH TYR 33 44.891 12.588 8.155 1.00 0.00 H ATOM 258 N VAL 34 44.001 16.945 0.689 1.00 0.00 N ATOM 259 CA VAL 34 43.995 17.320 -0.720 1.00 0.00 C ATOM 260 C VAL 34 44.845 16.306 -1.549 1.00 0.00 C ATOM 261 O VAL 34 46.079 16.264 -1.406 1.00 0.00 O ATOM 262 CB VAL 34 44.538 18.762 -0.836 1.00 0.00 C ATOM 263 CG1 VAL 34 44.593 19.249 -2.275 1.00 0.00 C ATOM 264 CG2 VAL 34 43.690 19.795 -0.021 1.00 0.00 C ATOM 265 N ASP 35 44.149 15.532 -2.439 1.00 0.00 N ATOM 266 CA ASP 35 44.765 14.457 -3.243 1.00 0.00 C ATOM 267 C ASP 35 45.570 13.379 -2.399 1.00 0.00 C ATOM 268 O ASP 35 46.336 12.628 -2.993 1.00 0.00 O ATOM 269 CB ASP 35 45.759 15.118 -4.186 1.00 0.00 C ATOM 270 CG ASP 35 46.100 14.257 -5.441 1.00 0.00 C ATOM 271 OD1 ASP 35 45.384 13.317 -5.697 1.00 0.00 O ATOM 272 OD2 ASP 35 46.967 14.637 -6.190 1.00 0.00 O ATOM 273 N GLY 36 45.121 13.024 -1.187 1.00 0.00 N ATOM 274 CA GLY 36 45.746 12.072 -0.300 1.00 0.00 C ATOM 275 C GLY 36 46.528 12.714 0.910 1.00 0.00 C ATOM 276 O GLY 36 46.571 12.093 1.989 1.00 0.00 O ATOM 277 N LYS 37 47.148 13.889 0.727 1.00 0.00 N ATOM 278 CA LYS 37 47.937 14.594 1.760 1.00 0.00 C ATOM 279 C LYS 37 47.036 15.624 2.458 1.00 0.00 C ATOM 280 O LYS 37 46.715 16.615 1.796 1.00 0.00 O ATOM 281 CB LYS 37 49.240 15.153 1.121 1.00 0.00 C ATOM 282 CG LYS 37 50.105 15.860 2.177 1.00 0.00 C ATOM 283 CD LYS 37 51.352 16.428 1.515 1.00 0.00 C ATOM 284 CE LYS 37 52.271 17.084 2.534 1.00 0.00 C ATOM 285 NZ LYS 37 53.503 17.630 1.904 1.00 0.00 N ATOM 286 N GLU 38 47.177 15.745 3.787 1.00 0.00 N ATOM 287 CA GLU 38 46.439 16.683 4.542 1.00 0.00 C ATOM 288 C GLU 38 47.144 18.091 4.654 1.00 0.00 C ATOM 289 O GLU 38 48.300 18.113 5.153 1.00 0.00 O ATOM 290 CB GLU 38 46.393 16.103 5.954 1.00 0.00 C ATOM 291 CG GLU 38 45.519 16.967 6.948 1.00 0.00 C ATOM 292 CD GLU 38 45.488 16.371 8.328 1.00 0.00 C ATOM 293 OE1 GLU 38 46.051 15.319 8.513 1.00 0.00 O ATOM 294 OE2 GLU 38 44.999 17.019 9.223 1.00 0.00 O ATOM 295 N GLU 39 46.665 18.975 3.840 1.00 0.00 N ATOM 296 CA GLU 39 47.194 20.309 3.938 1.00 0.00 C ATOM 297 C GLU 39 46.164 21.358 4.404 1.00 0.00 C ATOM 298 O GLU 39 45.247 21.761 3.668 1.00 0.00 O ATOM 299 CB GLU 39 47.732 20.719 2.545 1.00 0.00 C ATOM 300 CG GLU 39 49.014 20.011 2.131 1.00 0.00 C ATOM 301 CD GLU 39 50.203 20.511 2.902 1.00 0.00 C ATOM 302 OE1 GLU 39 50.061 21.469 3.624 1.00 0.00 O ATOM 303 OE2 GLU 39 51.228 19.871 2.856 1.00 0.00 O ATOM 304 N ILE 40 46.187 21.535 5.709 1.00 0.00 N ATOM 305 CA ILE 40 45.369 22.558 6.344 1.00 0.00 C ATOM 306 C ILE 40 46.212 23.675 7.083 1.00 0.00 C ATOM 307 O ILE 40 45.875 24.838 6.856 1.00 0.00 O ATOM 308 CB ILE 40 44.494 21.783 7.379 1.00 0.00 C ATOM 309 CG1 ILE 40 43.898 20.541 6.815 1.00 0.00 C ATOM 310 CG2 ILE 40 43.356 22.761 7.852 1.00 0.00 C ATOM 311 CD1 ILE 40 43.343 19.592 7.852 1.00 0.00 C ATOM 312 N ARG 41 47.430 23.384 7.619 1.00 0.00 N ATOM 313 CA ARG 41 48.282 24.297 8.417 1.00 0.00 C ATOM 314 C ARG 41 47.386 25.111 9.446 1.00 0.00 C ATOM 315 O ARG 41 47.885 26.117 9.949 1.00 0.00 O ATOM 316 CB ARG 41 48.980 25.275 7.430 1.00 0.00 C ATOM 317 CG ARG 41 49.943 24.595 6.484 1.00 0.00 C ATOM 318 CD ARG 41 50.645 25.527 5.566 1.00 0.00 C ATOM 319 NE ARG 41 51.428 24.876 4.528 1.00 0.00 N ATOM 320 CZ ARG 41 52.135 25.525 3.580 1.00 0.00 C ATOM 321 NH1 ARG 41 52.128 26.837 3.513 1.00 0.00 H ATOM 322 NH2 ARG 41 52.813 24.805 2.706 1.00 0.00 H ATOM 323 N LYS 42 46.306 24.532 9.978 1.00 0.00 N ATOM 324 CA LYS 42 45.333 25.186 10.873 1.00 0.00 C ATOM 325 C LYS 42 44.412 24.074 11.451 1.00 0.00 C ATOM 326 O LYS 42 44.078 23.129 10.754 1.00 0.00 O ATOM 327 CB LYS 42 44.602 26.394 10.177 1.00 0.00 C ATOM 328 CG LYS 42 43.701 25.866 9.048 1.00 0.00 C ATOM 329 CD LYS 42 42.993 27.051 8.407 1.00 0.00 C ATOM 330 CE LYS 42 43.983 27.977 7.715 1.00 0.00 C ATOM 331 NZ LYS 42 44.702 27.294 6.604 1.00 0.00 N ATOM 332 N GLU 43 43.868 24.305 12.603 1.00 0.00 N ATOM 333 CA GLU 43 43.035 23.301 13.335 1.00 0.00 C ATOM 334 C GLU 43 41.533 23.201 12.926 1.00 0.00 C ATOM 335 O GLU 43 41.198 22.305 12.136 1.00 0.00 O ATOM 336 CB GLU 43 43.212 23.541 14.851 1.00 0.00 C ATOM 337 CG GLU 43 44.570 23.265 15.412 1.00 0.00 C ATOM 338 CD GLU 43 44.626 23.553 16.887 1.00 0.00 C ATOM 339 OE1 GLU 43 43.653 24.032 17.419 1.00 0.00 O ATOM 340 OE2 GLU 43 45.602 23.194 17.505 1.00 0.00 O ATOM 341 N TRP 44 40.638 24.135 13.321 1.00 0.00 N ATOM 342 CA TRP 44 39.199 24.179 12.983 1.00 0.00 C ATOM 343 C TRP 44 38.528 25.539 13.367 1.00 0.00 C ATOM 344 O TRP 44 38.870 26.181 14.365 1.00 0.00 O ATOM 345 CB TRP 44 38.462 22.993 13.658 1.00 0.00 C ATOM 346 CG TRP 44 38.640 22.990 15.146 1.00 0.00 C ATOM 347 CD1 TRP 44 37.900 23.668 16.066 1.00 0.00 C ATOM 348 CD2 TRP 44 39.616 22.246 15.885 1.00 0.00 C ATOM 349 NE1 TRP 44 38.353 23.395 17.333 1.00 0.00 N ATOM 350 CE2 TRP 44 39.408 22.521 17.247 1.00 0.00 C ATOM 351 CE3 TRP 44 40.648 21.368 15.523 1.00 0.00 C ATOM 352 CZ2 TRP 44 40.186 21.960 18.246 1.00 0.00 C ATOM 353 CZ3 TRP 44 41.426 20.806 16.526 1.00 0.00 C ATOM 354 CH2 TRP 44 41.203 21.092 17.849 1.00 0.00 H ATOM 355 N MET 45 37.420 25.821 12.651 1.00 0.00 N ATOM 356 CA MET 45 36.655 27.068 12.839 1.00 0.00 C ATOM 357 C MET 45 35.365 26.809 13.641 1.00 0.00 C ATOM 358 O MET 45 34.494 26.038 13.215 1.00 0.00 O ATOM 359 CB MET 45 36.327 27.685 11.479 1.00 0.00 C ATOM 360 CG MET 45 37.536 27.961 10.608 1.00 0.00 C ATOM 361 SD MET 45 38.649 29.186 11.324 1.00 0.00 S ATOM 362 CE MET 45 37.663 30.672 11.168 1.00 0.00 C ATOM 363 N PHE 46 35.251 27.476 14.770 1.00 0.00 N ATOM 364 CA PHE 46 34.089 27.396 15.595 1.00 0.00 C ATOM 365 C PHE 46 33.032 28.260 14.901 1.00 0.00 C ATOM 366 O PHE 46 32.923 29.486 15.125 1.00 0.00 O ATOM 367 CB PHE 46 34.440 27.973 16.969 1.00 0.00 C ATOM 368 CG PHE 46 35.505 27.209 17.683 1.00 0.00 C ATOM 369 CD1 PHE 46 36.834 27.575 17.526 1.00 0.00 C ATOM 370 CD2 PHE 46 35.206 26.129 18.501 1.00 0.00 C ATOM 371 CE1 PHE 46 37.838 26.881 18.170 1.00 0.00 C ATOM 372 CE2 PHE 46 36.210 25.435 19.148 1.00 0.00 C ATOM 373 CZ PHE 46 37.528 25.811 18.981 1.00 0.00 C ATOM 374 N LYS 47 32.035 27.588 14.371 1.00 0.00 N ATOM 375 CA LYS 47 30.924 28.177 13.597 1.00 0.00 C ATOM 376 C LYS 47 29.686 27.311 13.812 1.00 0.00 C ATOM 377 O LYS 47 29.793 26.062 13.852 1.00 0.00 O ATOM 378 CB LYS 47 31.283 28.295 12.108 1.00 0.00 C ATOM 379 CG LYS 47 32.560 29.050 11.840 1.00 0.00 C ATOM 380 CD LYS 47 32.441 30.507 12.259 1.00 0.00 C ATOM 381 CE LYS 47 33.647 31.316 11.804 1.00 0.00 C ATOM 382 NZ LYS 47 33.605 32.712 12.317 1.00 0.00 N ATOM 383 N LEU 48 28.530 27.961 13.926 1.00 0.00 N ATOM 384 CA LEU 48 27.245 27.278 14.115 1.00 0.00 C ATOM 385 C LEU 48 27.157 26.051 13.143 1.00 0.00 C ATOM 386 O LEU 48 27.079 24.911 13.622 1.00 0.00 O ATOM 387 CB LEU 48 26.130 28.301 13.926 1.00 0.00 C ATOM 388 CG LEU 48 26.086 29.446 14.887 1.00 0.00 C ATOM 389 CD1 LEU 48 25.009 30.441 14.479 1.00 0.00 C ATOM 390 CD2 LEU 48 25.840 28.933 16.299 1.00 0.00 C ATOM 391 N VAL 49 27.280 26.237 11.823 1.00 0.00 N ATOM 392 CA VAL 49 27.319 25.193 10.786 1.00 0.00 C ATOM 393 C VAL 49 28.776 24.707 10.510 1.00 0.00 C ATOM 394 O VAL 49 28.912 23.590 10.001 1.00 0.00 O ATOM 395 CB VAL 49 26.707 25.745 9.459 1.00 0.00 C ATOM 396 CG1 VAL 49 25.265 26.127 9.668 1.00 0.00 C ATOM 397 CG2 VAL 49 27.524 26.906 8.938 1.00 0.00 C ATOM 398 N GLY 50 29.837 25.449 10.945 1.00 0.00 N ATOM 399 CA GLY 50 31.219 25.140 10.762 1.00 0.00 C ATOM 400 C GLY 50 31.746 25.626 9.386 1.00 0.00 C ATOM 401 O GLY 50 31.054 25.592 8.354 1.00 0.00 O ATOM 402 N LYS 51 33.066 25.598 9.359 1.00 0.00 N ATOM 403 CA LYS 51 33.903 26.056 8.278 1.00 0.00 C ATOM 404 C LYS 51 35.374 25.582 8.499 1.00 0.00 C ATOM 405 O LYS 51 35.892 25.467 9.623 1.00 0.00 O ATOM 406 CB LYS 51 33.833 27.613 8.254 1.00 0.00 C ATOM 407 CG LYS 51 34.705 28.210 7.127 1.00 0.00 C ATOM 408 CD LYS 51 34.546 29.724 7.085 1.00 0.00 C ATOM 409 CE LYS 51 35.306 30.328 5.913 1.00 0.00 C ATOM 410 NZ LYS 51 35.134 31.807 5.841 1.00 0.00 N ATOM 411 N GLU 52 36.096 25.409 7.376 1.00 0.00 N ATOM 412 CA GLU 52 37.504 24.953 7.393 1.00 0.00 C ATOM 413 C GLU 52 38.305 25.538 6.184 1.00 0.00 C ATOM 414 O GLU 52 38.157 25.025 5.064 1.00 0.00 O ATOM 415 CB GLU 52 37.504 23.423 7.428 1.00 0.00 C ATOM 416 CG GLU 52 38.935 22.843 7.562 1.00 0.00 C ATOM 417 CD GLU 52 39.616 23.380 8.790 1.00 0.00 C ATOM 418 OE1 GLU 52 39.316 22.916 9.866 1.00 0.00 O ATOM 419 OE2 GLU 52 40.517 24.173 8.647 1.00 0.00 O ATOM 420 N THR 53 39.467 26.099 6.537 1.00 0.00 N ATOM 421 CA THR 53 40.425 26.701 5.600 1.00 0.00 C ATOM 422 C THR 53 41.609 25.728 5.381 1.00 0.00 C ATOM 423 O THR 53 42.398 25.453 6.306 1.00 0.00 O ATOM 424 CB THR 53 40.965 28.051 6.189 1.00 0.00 C ATOM 425 OG1 THR 53 39.984 28.862 6.791 1.00 0.00 O ATOM 426 CG2 THR 53 41.930 28.777 5.209 1.00 0.00 C ATOM 427 N PHE 54 41.885 25.466 4.086 1.00 0.00 N ATOM 428 CA PHE 54 42.927 24.552 3.626 1.00 0.00 C ATOM 429 C PHE 54 43.576 25.054 2.298 1.00 0.00 C ATOM 430 O PHE 54 42.876 25.478 1.370 1.00 0.00 O ATOM 431 CB PHE 54 42.271 23.168 3.414 1.00 0.00 C ATOM 432 CG PHE 54 41.328 23.100 2.260 1.00 0.00 C ATOM 433 CD1 PHE 54 41.756 22.774 0.982 1.00 0.00 C ATOM 434 CD2 PHE 54 39.981 23.366 2.462 1.00 0.00 C ATOM 435 CE1 PHE 54 40.863 22.715 -0.068 1.00 0.00 C ATOM 436 CE2 PHE 54 39.085 23.306 1.412 1.00 0.00 C ATOM 437 CZ PHE 54 39.527 22.980 0.144 1.00 0.00 C ATOM 438 N TYR 55 44.863 24.774 2.150 1.00 0.00 N ATOM 439 CA TYR 55 45.673 25.048 0.960 1.00 0.00 C ATOM 440 C TYR 55 45.406 24.020 -0.182 1.00 0.00 C ATOM 441 O TYR 55 45.663 22.814 -0.036 1.00 0.00 O ATOM 442 CB TYR 55 47.174 24.997 1.322 1.00 0.00 C ATOM 443 CG TYR 55 48.094 25.246 0.147 1.00 0.00 C ATOM 444 CD1 TYR 55 48.280 26.523 -0.361 1.00 0.00 C ATOM 445 CD2 TYR 55 48.778 24.196 -0.445 1.00 0.00 C ATOM 446 CE1 TYR 55 49.126 26.748 -1.432 1.00 0.00 C ATOM 447 CE2 TYR 55 49.624 24.409 -1.517 1.00 0.00 C ATOM 448 CZ TYR 55 49.796 25.686 -2.007 1.00 0.00 C ATOM 449 OH TYR 55 50.639 25.904 -3.073 1.00 0.00 H ATOM 450 N VAL 56 44.809 24.532 -1.267 1.00 0.00 N ATOM 451 CA VAL 56 44.537 23.812 -2.499 1.00 0.00 C ATOM 452 C VAL 56 45.884 23.376 -3.160 1.00 0.00 C ATOM 453 O VAL 56 46.793 24.209 -3.371 1.00 0.00 O ATOM 454 CB VAL 56 43.736 24.766 -3.403 1.00 0.00 C ATOM 455 CG1 VAL 56 43.454 24.073 -4.790 1.00 0.00 C ATOM 456 CG2 VAL 56 42.418 25.193 -2.888 1.00 0.00 C ATOM 457 N GLY 57 45.854 22.186 -3.777 1.00 0.00 N ATOM 458 CA GLY 57 47.022 21.643 -4.479 1.00 0.00 C ATOM 459 C GLY 57 47.629 22.659 -5.504 1.00 0.00 C ATOM 460 O GLY 57 48.845 22.556 -5.699 1.00 0.00 O ATOM 461 N ALA 58 46.828 23.421 -6.300 1.00 0.00 N ATOM 462 CA ALA 58 47.265 24.462 -7.211 1.00 0.00 C ATOM 463 C ALA 58 48.197 25.422 -6.422 1.00 0.00 C ATOM 464 O ALA 58 47.741 26.077 -5.469 1.00 0.00 O ATOM 465 CB ALA 58 46.034 25.161 -7.820 1.00 0.00 C ATOM 466 N ALA 59 49.383 25.639 -6.977 1.00 0.00 N ATOM 467 CA ALA 59 50.429 26.424 -6.357 1.00 0.00 C ATOM 468 C ALA 59 49.944 27.853 -6.046 1.00 0.00 C ATOM 469 O ALA 59 49.555 28.602 -6.966 1.00 0.00 O ATOM 470 CB ALA 59 51.645 26.395 -7.305 1.00 0.00 C ATOM 471 N LYS 60 50.226 28.268 -4.810 1.00 0.00 N ATOM 472 CA LYS 60 49.777 29.565 -4.238 1.00 0.00 C ATOM 473 C LYS 60 48.228 29.807 -4.435 1.00 0.00 C ATOM 474 O LYS 60 47.829 30.976 -4.551 1.00 0.00 O ATOM 475 CB LYS 60 50.597 30.700 -4.848 1.00 0.00 C ATOM 476 CG LYS 60 52.090 30.565 -4.682 1.00 0.00 C ATOM 477 CD LYS 60 52.827 31.766 -5.253 1.00 0.00 C ATOM 478 CE LYS 60 54.336 31.575 -5.183 1.00 0.00 C ATOM 479 NZ LYS 60 55.068 32.726 -5.780 1.00 0.00 N ATOM 480 N THR 61 47.379 28.815 -4.100 1.00 0.00 N ATOM 481 CA THR 61 45.946 28.827 -4.285 1.00 0.00 C ATOM 482 C THR 61 45.341 28.066 -3.044 1.00 0.00 C ATOM 483 O THR 61 45.680 26.924 -2.758 1.00 0.00 O ATOM 484 CB THR 61 45.509 28.426 -5.740 1.00 0.00 C ATOM 485 OG1 THR 61 46.235 29.247 -6.780 1.00 0.00 O ATOM 486 CG2 THR 61 44.105 28.382 -6.062 1.00 0.00 C ATOM 487 N LYS 62 44.472 28.756 -2.303 1.00 0.00 N ATOM 488 CA LYS 62 43.854 28.281 -1.079 1.00 0.00 C ATOM 489 C LYS 62 42.317 28.590 -1.089 1.00 0.00 C ATOM 490 O LYS 62 41.940 29.765 -1.222 1.00 0.00 O ATOM 491 CB LYS 62 44.584 29.034 0.073 1.00 0.00 C ATOM 492 CG LYS 62 45.858 28.669 0.491 1.00 0.00 C ATOM 493 CD LYS 62 46.087 29.549 1.710 1.00 0.00 C ATOM 494 CE LYS 62 47.575 29.745 2.079 1.00 0.00 C ATOM 495 NZ LYS 62 48.196 28.568 2.687 1.00 0.00 N ATOM 496 N ALA 63 41.548 27.659 -0.531 1.00 0.00 N ATOM 497 CA ALA 63 40.073 27.715 -0.470 1.00 0.00 C ATOM 498 C ALA 63 39.502 27.190 0.876 1.00 0.00 C ATOM 499 O ALA 63 39.945 26.142 1.343 1.00 0.00 O ATOM 500 CB ALA 63 39.596 26.811 -1.624 1.00 0.00 C ATOM 501 N THR 64 38.330 27.712 1.262 1.00 0.00 N ATOM 502 CA THR 64 37.652 27.385 2.502 1.00 0.00 C ATOM 503 C THR 64 36.351 26.517 2.237 1.00 0.00 C ATOM 504 O THR 64 35.563 26.814 1.325 1.00 0.00 O ATOM 505 CB THR 64 37.382 28.736 3.236 1.00 0.00 C ATOM 506 OG1 THR 64 36.567 29.721 2.691 1.00 0.00 O ATOM 507 CG2 THR 64 38.752 29.455 3.608 1.00 0.00 C ATOM 508 N ILE 65 36.163 25.453 3.046 1.00 0.00 N ATOM 509 CA ILE 65 34.985 24.588 2.938 1.00 0.00 C ATOM 510 C ILE 65 33.709 25.310 3.498 1.00 0.00 C ATOM 511 O ILE 65 33.630 25.644 4.699 1.00 0.00 O ATOM 512 CB ILE 65 35.218 23.279 3.706 1.00 0.00 C ATOM 513 CG1 ILE 65 36.508 22.616 3.263 1.00 0.00 C ATOM 514 CG2 ILE 65 34.024 22.336 3.485 1.00 0.00 C ATOM 515 CD1 ILE 65 36.901 21.417 4.096 1.00 0.00 C ATOM 516 N ASN 66 32.755 25.572 2.616 1.00 0.00 N ATOM 517 CA ASN 66 31.451 26.149 2.902 1.00 0.00 C ATOM 518 C ASN 66 30.470 25.006 3.324 1.00 0.00 C ATOM 519 O ASN 66 30.017 24.223 2.477 1.00 0.00 O ATOM 520 CB ASN 66 30.958 26.939 1.663 1.00 0.00 C ATOM 521 CG ASN 66 29.634 27.625 1.961 1.00 0.00 C ATOM 522 OD1 ASN 66 28.802 27.172 2.757 1.00 0.00 O ATOM 523 ND2 ASN 66 29.419 28.694 1.237 1.00 0.00 N ATOM 524 N ILE 67 30.198 24.914 4.639 1.00 0.00 N ATOM 525 CA ILE 67 29.305 23.900 5.212 1.00 0.00 C ATOM 526 C ILE 67 27.884 24.533 5.414 1.00 0.00 C ATOM 527 O ILE 67 27.705 25.483 6.186 1.00 0.00 O ATOM 528 CB ILE 67 29.848 23.295 6.507 1.00 0.00 C ATOM 529 CG1 ILE 67 31.276 22.644 6.233 1.00 0.00 C ATOM 530 CG2 ILE 67 28.901 22.228 7.121 1.00 0.00 C ATOM 531 CD1 ILE 67 32.071 22.217 7.507 1.00 0.00 C ATOM 532 N ASP 68 26.875 23.874 4.772 1.00 0.00 N ATOM 533 CA ASP 68 25.447 24.246 4.801 1.00 0.00 C ATOM 534 C ASP 68 24.618 23.080 5.481 1.00 0.00 C ATOM 535 O ASP 68 24.006 22.266 4.820 1.00 0.00 O ATOM 536 CB ASP 68 24.968 24.590 3.380 1.00 0.00 C ATOM 537 CG ASP 68 23.487 24.999 3.353 1.00 0.00 C ATOM 538 OD1 ASP 68 22.862 25.036 4.387 1.00 0.00 O ATOM 539 OD2 ASP 68 23.059 25.441 2.315 1.00 0.00 O ATOM 540 N ALA 69 24.226 23.375 6.727 1.00 0.00 N ATOM 541 CA ALA 69 23.457 22.508 7.624 1.00 0.00 C ATOM 542 C ALA 69 21.948 22.517 7.227 1.00 0.00 C ATOM 543 O ALA 69 21.309 23.560 7.258 1.00 0.00 O ATOM 544 CB ALA 69 23.671 23.101 9.062 1.00 0.00 C ATOM 545 N ILE 70 21.416 21.383 6.815 1.00 0.00 N ATOM 546 CA ILE 70 20.005 21.230 6.380 1.00 0.00 C ATOM 547 C ILE 70 19.139 20.645 7.517 1.00 0.00 C ATOM 548 O ILE 70 19.192 19.418 7.791 1.00 0.00 O ATOM 549 CB ILE 70 19.932 20.287 5.172 1.00 0.00 C ATOM 550 CG1 ILE 70 20.911 20.732 4.082 1.00 0.00 C ATOM 551 CG2 ILE 70 18.500 20.281 4.612 1.00 0.00 C ATOM 552 CD1 ILE 70 21.016 19.769 2.919 1.00 0.00 C ATOM 553 N SER 71 18.415 21.475 8.157 1.00 0.00 N ATOM 554 CA SER 71 17.511 21.171 9.272 1.00 0.00 C ATOM 555 C SER 71 18.221 20.331 10.411 1.00 0.00 C ATOM 556 O SER 71 17.483 19.812 11.269 1.00 0.00 O ATOM 557 CB SER 71 16.319 20.354 8.751 1.00 0.00 C ATOM 558 OG SER 71 15.478 21.006 7.795 1.00 0.00 O ATOM 559 N GLY 72 19.501 20.506 10.682 1.00 0.00 N ATOM 560 CA GLY 72 20.183 19.660 11.702 1.00 0.00 C ATOM 561 C GLY 72 20.377 18.159 11.376 1.00 0.00 C ATOM 562 O GLY 72 20.977 17.474 12.141 1.00 0.00 O ATOM 563 N PHE 73 19.813 17.653 10.241 1.00 0.00 N ATOM 564 CA PHE 73 19.839 16.229 9.821 1.00 0.00 C ATOM 565 C PHE 73 21.045 15.925 8.880 1.00 0.00 C ATOM 566 O PHE 73 21.634 14.857 9.018 1.00 0.00 O ATOM 567 CB PHE 73 18.507 15.892 9.159 1.00 0.00 C ATOM 568 CG PHE 73 17.317 16.058 10.031 1.00 0.00 C ATOM 569 CD1 PHE 73 16.297 16.924 9.669 1.00 0.00 C ATOM 570 CD2 PHE 73 17.206 15.362 11.227 1.00 0.00 C ATOM 571 CE1 PHE 73 15.190 17.092 10.483 1.00 0.00 C ATOM 572 CE2 PHE 73 16.100 15.527 12.039 1.00 0.00 C ATOM 573 CZ PHE 73 15.094 16.394 11.667 1.00 0.00 C ATOM 574 N ALA 74 21.269 16.739 7.804 1.00 0.00 N ATOM 575 CA ALA 74 22.382 16.635 6.877 1.00 0.00 C ATOM 576 C ALA 74 23.058 18.023 6.671 1.00 0.00 C ATOM 577 O ALA 74 22.778 18.986 7.393 1.00 0.00 O ATOM 578 CB ALA 74 21.782 16.069 5.571 1.00 0.00 C ATOM 579 N TYR 75 24.231 17.967 6.061 1.00 0.00 N ATOM 580 CA TYR 75 25.041 19.127 5.723 1.00 0.00 C ATOM 581 C TYR 75 25.654 18.948 4.311 1.00 0.00 C ATOM 582 O TYR 75 26.345 17.949 4.021 1.00 0.00 O ATOM 583 CB TYR 75 26.224 19.123 6.726 1.00 0.00 C ATOM 584 CG TYR 75 25.785 19.486 8.148 1.00 0.00 C ATOM 585 CD1 TYR 75 25.437 18.474 9.030 1.00 0.00 C ATOM 586 CD2 TYR 75 25.721 20.798 8.594 1.00 0.00 C ATOM 587 CE1 TYR 75 25.033 18.758 10.320 1.00 0.00 C ATOM 588 CE2 TYR 75 25.319 21.095 9.882 1.00 0.00 C ATOM 589 CZ TYR 75 24.976 20.071 10.743 1.00 0.00 C ATOM 590 OH TYR 75 24.576 20.361 12.027 1.00 0.00 H ATOM 591 N GLU 76 25.451 19.963 3.486 1.00 0.00 N ATOM 592 CA GLU 76 26.016 20.071 2.131 1.00 0.00 C ATOM 593 C GLU 76 27.485 20.575 2.182 1.00 0.00 C ATOM 594 O GLU 76 27.750 21.672 2.676 1.00 0.00 O ATOM 595 CB GLU 76 25.090 21.026 1.354 1.00 0.00 C ATOM 596 CG GLU 76 25.593 21.223 -0.114 1.00 0.00 C ATOM 597 CD GLU 76 24.729 22.220 -0.835 1.00 0.00 C ATOM 598 OE1 GLU 76 23.824 22.743 -0.228 1.00 0.00 O ATOM 599 OE2 GLU 76 25.039 22.544 -1.957 1.00 0.00 O ATOM 600 N TYR 77 28.344 19.892 1.450 1.00 0.00 N ATOM 601 CA TYR 77 29.789 20.128 1.368 1.00 0.00 C ATOM 602 C TYR 77 30.190 20.748 -0.005 1.00 0.00 C ATOM 603 O TYR 77 29.973 20.128 -1.060 1.00 0.00 O ATOM 604 CB TYR 77 30.518 18.822 1.646 1.00 0.00 C ATOM 605 CG TYR 77 30.305 18.243 3.001 1.00 0.00 C ATOM 606 CD1 TYR 77 29.337 17.270 3.208 1.00 0.00 C ATOM 607 CD2 TYR 77 31.055 18.664 4.090 1.00 0.00 C ATOM 608 CE1 TYR 77 29.119 16.734 4.460 1.00 0.00 C ATOM 609 CE2 TYR 77 30.847 18.133 5.347 1.00 0.00 C ATOM 610 CZ TYR 77 29.877 17.169 5.530 1.00 0.00 C ATOM 611 OH TYR 77 29.665 16.634 6.781 1.00 0.00 H ATOM 612 N THR 78 30.592 22.042 0.060 1.00 0.00 N ATOM 613 CA THR 78 31.052 22.812 -1.081 1.00 0.00 C ATOM 614 C THR 78 32.368 23.622 -0.756 1.00 0.00 C ATOM 615 O THR 78 32.309 24.519 0.090 1.00 0.00 O ATOM 616 CB THR 78 29.961 23.772 -1.610 1.00 0.00 C ATOM 617 OG1 THR 78 29.655 24.895 -0.695 1.00 0.00 O ATOM 618 CG2 THR 78 28.811 23.039 -2.266 1.00 0.00 C ATOM 619 N LEU 79 33.234 23.756 -1.759 1.00 0.00 N ATOM 620 CA LEU 79 34.518 24.482 -1.706 1.00 0.00 C ATOM 621 C LEU 79 34.475 25.895 -2.368 1.00 0.00 C ATOM 622 O LEU 79 33.461 26.186 -2.991 1.00 0.00 O ATOM 623 CB LEU 79 35.517 23.589 -2.467 1.00 0.00 C ATOM 624 CG LEU 79 35.744 22.188 -1.899 1.00 0.00 C ATOM 625 CD1 LEU 79 36.792 21.439 -2.710 1.00 0.00 C ATOM 626 CD2 LEU 79 36.154 22.272 -0.435 1.00 0.00 C ATOM 627 N GLU 80 35.141 26.868 -1.729 1.00 0.00 N ATOM 628 CA GLU 80 35.239 28.210 -2.227 1.00 0.00 C ATOM 629 C GLU 80 36.741 28.515 -2.539 1.00 0.00 C ATOM 630 O GLU 80 37.472 28.993 -1.635 1.00 0.00 O ATOM 631 CB GLU 80 34.646 29.203 -1.214 1.00 0.00 C ATOM 632 CG GLU 80 33.177 29.027 -0.977 1.00 0.00 C ATOM 633 CD GLU 80 32.665 30.025 0.025 1.00 0.00 C ATOM 634 OE1 GLU 80 33.435 30.843 0.467 1.00 0.00 O ATOM 635 OE2 GLU 80 31.481 30.041 0.266 1.00 0.00 O ATOM 636 N ILE 81 37.178 28.377 -3.787 1.00 0.00 N ATOM 637 CA ILE 81 38.539 28.663 -4.216 1.00 0.00 C ATOM 638 C ILE 81 38.752 30.218 -4.294 1.00 0.00 C ATOM 639 O ILE 81 38.103 30.874 -5.098 1.00 0.00 O ATOM 640 CB ILE 81 38.951 27.944 -5.524 1.00 0.00 C ATOM 641 CG1 ILE 81 38.763 26.459 -5.532 1.00 0.00 C ATOM 642 CG2 ILE 81 40.311 28.444 -6.104 1.00 0.00 C ATOM 643 CD1 ILE 81 38.888 25.881 -6.966 1.00 0.00 C ATOM 644 N ASN 82 39.695 30.757 -3.571 1.00 0.00 N ATOM 645 CA ASN 82 39.978 32.211 -3.422 1.00 0.00 C ATOM 646 C ASN 82 38.673 33.016 -3.030 1.00 0.00 C ATOM 647 O ASN 82 38.552 34.206 -3.353 1.00 0.00 O ATOM 648 CB ASN 82 40.586 32.862 -4.662 1.00 0.00 C ATOM 649 CG ASN 82 41.858 32.156 -5.086 1.00 0.00 C ATOM 650 OD1 ASN 82 42.791 32.009 -4.289 1.00 0.00 O ATOM 651 ND2 ASN 82 41.936 31.824 -6.347 1.00 0.00 N ATOM 652 N GLY 83 37.982 32.464 -2.017 1.00 0.00 N ATOM 653 CA GLY 83 36.697 32.995 -1.532 1.00 0.00 C ATOM 654 C GLY 83 35.497 32.885 -2.564 1.00 0.00 C ATOM 655 O GLY 83 34.414 33.365 -2.229 1.00 0.00 O ATOM 656 N LYS 84 35.634 32.237 -3.724 1.00 0.00 N ATOM 657 CA LYS 84 34.642 32.112 -4.769 1.00 0.00 C ATOM 658 C LYS 84 34.238 30.609 -4.789 1.00 0.00 C ATOM 659 O LYS 84 35.017 29.745 -5.238 1.00 0.00 O ATOM 660 CB LYS 84 35.174 32.591 -6.139 1.00 0.00 C ATOM 661 CG LYS 84 35.471 34.059 -6.172 1.00 0.00 C ATOM 662 CD LYS 84 36.039 34.453 -7.528 1.00 0.00 C ATOM 663 CE LYS 84 36.367 35.937 -7.582 1.00 0.00 C ATOM 664 NZ LYS 84 36.912 36.340 -8.907 1.00 0.00 N ATOM 665 N SER 85 32.909 30.445 -5.000 1.00 0.00 N ATOM 666 CA SER 85 32.264 29.140 -5.055 1.00 0.00 C ATOM 667 C SER 85 32.987 28.218 -6.080 1.00 0.00 C ATOM 668 O SER 85 33.326 28.610 -7.211 1.00 0.00 O ATOM 669 CB SER 85 30.762 29.324 -5.395 1.00 0.00 C ATOM 670 OG SER 85 30.027 28.090 -5.513 1.00 0.00 O ATOM 671 N LEU 86 33.222 26.990 -5.601 1.00 0.00 N ATOM 672 CA LEU 86 33.831 25.857 -6.329 1.00 0.00 C ATOM 673 C LEU 86 33.205 25.720 -7.765 1.00 0.00 C ATOM 674 O LEU 86 33.960 25.349 -8.668 1.00 0.00 O ATOM 675 CB LEU 86 33.643 24.555 -5.534 1.00 0.00 C ATOM 676 CG LEU 86 34.300 23.320 -6.166 1.00 0.00 C ATOM 677 CD1 LEU 86 35.810 23.510 -6.235 1.00 0.00 C ATOM 678 CD2 LEU 86 33.951 22.090 -5.340 1.00 0.00 C ATOM 679 N LYS 87 31.904 26.010 -8.000 1.00 0.00 N ATOM 680 CA LYS 87 31.267 25.997 -9.292 1.00 0.00 C ATOM 681 C LYS 87 32.085 26.801 -10.353 1.00 0.00 C ATOM 682 O LYS 87 32.185 26.266 -11.462 1.00 0.00 O ATOM 683 CB LYS 87 29.802 26.497 -9.284 1.00 0.00 C ATOM 684 CG LYS 87 28.773 25.629 -8.622 1.00 0.00 C ATOM 685 CD LYS 87 27.445 26.397 -8.611 1.00 0.00 C ATOM 686 CE LYS 87 27.210 27.247 -7.401 1.00 0.00 C ATOM 687 NZ LYS 87 26.053 26.731 -6.603 1.00 0.00 N ATOM 688 N LYS 88 32.356 28.132 -10.190 1.00 0.00 N ATOM 689 CA LYS 88 33.218 28.892 -11.129 1.00 0.00 C ATOM 690 C LYS 88 34.486 28.089 -11.569 1.00 0.00 C ATOM 691 O LYS 88 34.745 28.039 -12.794 1.00 0.00 O ATOM 692 CB LYS 88 33.596 30.206 -10.440 1.00 0.00 C ATOM 693 CG LYS 88 32.462 31.145 -10.149 1.00 0.00 C ATOM 694 CD LYS 88 32.945 32.423 -9.482 1.00 0.00 C ATOM 695 CE LYS 88 31.785 33.355 -9.161 1.00 0.00 C ATOM 696 NZ LYS 88 32.245 34.622 -8.534 1.00 0.00 N ATOM 697 N TYR 89 35.249 27.458 -10.675 1.00 0.00 N ATOM 698 CA TYR 89 36.465 26.663 -11.041 1.00 0.00 C ATOM 699 C TYR 89 36.168 25.270 -11.700 1.00 0.00 C ATOM 700 O TYR 89 36.904 24.918 -12.629 1.00 0.00 O ATOM 701 CB TYR 89 37.374 26.465 -9.875 1.00 0.00 C ATOM 702 CG TYR 89 37.883 27.698 -9.212 1.00 0.00 C ATOM 703 CD1 TYR 89 37.225 28.227 -8.091 1.00 0.00 C ATOM 704 CD2 TYR 89 38.956 28.417 -9.755 1.00 0.00 C ATOM 705 CE1 TYR 89 37.699 29.439 -7.568 1.00 0.00 C ATOM 706 CE2 TYR 89 39.424 29.633 -9.247 1.00 0.00 C ATOM 707 CZ TYR 89 38.779 30.133 -8.111 1.00 0.00 C ATOM 708 OH TYR 89 39.183 31.326 -7.540 1.00 0.00 H ATOM 709 N MET 90 35.193 24.490 -11.248 1.00 0.00 N ATOM 710 CA MET 90 34.810 23.224 -11.858 1.00 0.00 C ATOM 711 C MET 90 33.555 23.420 -12.750 1.00 0.00 C ATOM 712 O MET 90 33.656 23.382 -13.980 1.00 0.00 O ATOM 713 CB MET 90 34.443 22.239 -10.718 1.00 0.00 C ATOM 714 CG MET 90 33.970 20.872 -11.233 1.00 0.00 C ATOM 715 SD MET 90 33.655 19.708 -9.893 1.00 0.00 S ATOM 716 CE MET 90 32.086 20.312 -9.280 1.00 0.00 C ATOM 717 OXT MET 90 32.494 23.613 -12.119 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.39 60.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 52.36 64.4 118 100.0 118 ARMSMC SURFACE . . . . . . . . 71.44 53.7 108 100.0 108 ARMSMC BURIED . . . . . . . . 37.41 70.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.31 56.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 75.33 56.1 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 75.14 57.7 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 88.22 38.6 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 55.16 80.6 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 60.90 65.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 53.35 71.7 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 57.91 71.8 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 60.24 57.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 61.88 77.3 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.31 45.8 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 70.31 45.8 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 61.59 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 66.32 55.6 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 81.12 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.46 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 84.46 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 96.26 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 87.18 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 67.62 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.71 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.71 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0523 CRMSCA SECONDARY STRUCTURE . . 3.35 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.68 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.51 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.83 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 3.52 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.82 269 100.0 269 CRMSMC BURIED . . . . . . . . 2.64 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.36 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.52 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.83 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.90 204 100.0 204 CRMSSC BURIED . . . . . . . . 3.32 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.60 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 4.23 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.85 424 100.0 424 CRMSALL BURIED . . . . . . . . 2.99 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.498 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.623 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 4.358 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 2.148 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.582 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.729 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 4.444 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 2.240 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.820 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 4.900 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 3.611 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 6.367 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 2.743 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.158 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 3.169 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 5.310 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 2.485 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 9 30 55 71 87 90 90 DISTCA CA (P) 10.00 33.33 61.11 78.89 96.67 90 DISTCA CA (RMS) 0.72 1.43 1.96 2.47 3.60 DISTCA ALL (N) 44 205 384 523 670 716 716 DISTALL ALL (P) 6.15 28.63 53.63 73.04 93.58 716 DISTALL ALL (RMS) 0.71 1.46 1.99 2.61 3.99 DISTALL END of the results output