####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 717), selected 90 , name T0540TS047_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS047_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 3 - 44 4.88 8.36 LONGEST_CONTINUOUS_SEGMENT: 42 4 - 45 4.86 8.45 LCS_AVERAGE: 40.28 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 62 - 87 1.93 9.82 LCS_AVERAGE: 16.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 74 - 85 0.81 9.72 LCS_AVERAGE: 8.54 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 5 8 34 3 5 5 6 8 8 9 10 11 16 20 30 37 40 47 50 53 59 63 67 LCS_GDT T 2 T 2 5 8 40 3 5 5 7 9 11 16 23 28 31 33 40 49 53 54 58 62 68 73 76 LCS_GDT D 3 D 3 5 10 42 3 5 5 7 9 17 24 32 36 41 48 49 54 60 63 66 68 71 75 78 LCS_GDT L 4 L 4 5 10 42 3 5 5 7 9 13 24 32 36 40 48 49 53 60 63 66 68 71 75 78 LCS_GDT V 5 V 5 8 10 42 3 5 8 11 19 27 33 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT A 6 A 6 8 10 42 3 6 8 10 15 20 30 40 42 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT V 7 V 7 8 10 42 3 6 8 10 15 22 32 40 42 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT W 8 W 8 8 10 42 3 6 8 10 15 20 30 40 42 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT D 9 D 9 8 10 42 4 6 8 10 15 20 30 40 42 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT V 10 V 10 8 10 42 4 6 8 10 15 20 29 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT A 11 A 11 8 10 42 4 6 8 10 15 22 32 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT L 12 L 12 8 10 42 4 5 9 13 23 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT S 13 S 13 3 10 42 3 3 11 13 17 20 30 40 42 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT D 14 D 14 3 11 42 3 3 5 11 16 23 25 27 28 29 40 50 53 55 58 62 65 70 73 77 LCS_GDT G 15 G 15 6 12 42 3 4 6 11 16 23 26 36 41 44 47 51 53 57 62 65 67 71 75 78 LCS_GDT V 16 V 16 7 12 42 3 6 8 11 19 27 32 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT H 17 H 17 10 13 42 5 6 10 11 16 23 27 40 42 47 49 56 59 62 63 66 68 71 75 78 LCS_GDT K 18 K 18 10 13 42 5 7 12 18 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 19 I 19 10 13 42 5 7 10 11 15 23 25 27 40 46 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 20 E 20 10 13 42 4 7 10 16 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT F 21 F 21 10 13 42 5 7 10 11 16 23 26 37 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 22 E 22 10 13 42 5 7 10 13 22 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT H 23 H 23 10 13 42 4 7 10 11 15 20 23 27 31 43 49 53 59 61 62 65 67 71 73 77 LCS_GDT G 24 G 24 10 13 42 4 7 10 11 16 23 25 29 42 46 51 56 59 62 62 66 68 71 73 78 LCS_GDT T 25 T 25 10 13 42 3 7 10 11 15 20 22 25 27 35 40 48 52 54 56 60 62 64 72 75 LCS_GDT T 26 T 26 10 15 42 3 7 10 11 16 23 25 28 37 42 46 50 53 56 62 63 64 68 73 77 LCS_GDT S 27 S 27 9 15 42 5 8 10 13 17 23 32 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT G 28 G 28 9 15 42 5 8 10 13 17 23 29 37 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT K 29 K 29 10 15 42 4 8 11 16 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT R 30 R 30 10 15 42 5 8 10 13 22 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT V 31 V 31 10 15 42 5 9 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT V 32 V 32 10 15 42 5 8 12 15 23 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT Y 33 Y 33 10 15 42 4 9 15 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT V 34 V 34 10 15 42 4 8 12 15 23 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT D 35 D 35 10 15 42 4 9 13 19 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT G 36 G 36 10 15 42 3 8 18 20 26 31 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT K 37 K 37 10 15 42 5 11 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 38 E 38 10 15 42 5 11 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 39 E 39 9 15 42 4 9 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 40 I 40 8 15 42 5 11 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT R 41 R 41 5 15 42 3 4 6 10 12 18 23 29 39 47 50 56 59 62 63 66 68 71 75 78 LCS_GDT K 42 K 42 5 12 42 3 4 6 10 11 17 21 26 36 47 49 56 59 62 63 66 68 71 75 78 LCS_GDT E 43 E 43 4 11 42 3 4 5 9 12 17 21 25 36 40 46 50 57 62 63 66 68 71 75 78 LCS_GDT W 44 W 44 4 8 42 3 4 5 8 12 17 21 24 31 37 41 46 51 56 59 63 68 71 75 78 LCS_GDT M 45 M 45 4 8 42 3 4 5 9 12 17 22 29 36 41 48 49 57 62 63 66 68 71 75 78 LCS_GDT F 46 F 46 4 8 38 4 4 5 8 12 16 21 24 30 35 40 46 51 54 56 62 65 70 73 78 LCS_GDT K 47 K 47 4 6 36 4 4 5 9 12 17 21 25 36 41 48 49 53 58 62 66 68 71 75 78 LCS_GDT L 48 L 48 4 6 23 4 4 5 5 9 13 14 20 30 35 43 47 51 54 58 62 65 70 75 78 LCS_GDT V 49 V 49 4 6 23 4 4 5 5 5 11 12 18 19 32 38 48 51 54 61 63 68 71 75 78 LCS_GDT G 50 G 50 5 9 23 4 5 5 6 9 9 10 12 14 18 22 34 44 53 61 63 68 71 75 78 LCS_GDT K 51 K 51 5 9 23 4 5 5 7 9 9 10 12 13 18 24 30 44 53 58 62 67 71 75 78 LCS_GDT E 52 E 52 5 9 22 4 5 5 7 9 9 10 12 14 18 24 30 36 53 58 62 65 69 75 78 LCS_GDT T 53 T 53 5 9 14 4 5 5 7 9 9 10 12 17 21 24 30 37 53 58 62 65 69 75 78 LCS_GDT F 54 F 54 5 9 14 4 5 5 7 9 9 10 14 17 21 24 30 36 42 58 62 65 69 73 77 LCS_GDT Y 55 Y 55 5 9 14 4 5 5 7 9 9 10 14 17 21 24 30 36 42 47 62 65 69 73 77 LCS_GDT V 56 V 56 5 9 32 4 5 5 7 9 9 10 14 17 21 24 30 36 53 58 62 65 69 75 78 LCS_GDT G 57 G 57 5 9 32 4 5 5 6 9 9 10 12 14 21 24 30 32 42 47 62 65 69 73 76 LCS_GDT A 58 A 58 3 9 33 3 3 4 6 9 9 10 12 13 18 22 30 36 39 43 62 65 67 75 78 LCS_GDT A 59 A 59 3 4 33 3 3 3 3 4 7 11 14 25 31 35 40 48 54 61 63 68 71 75 78 LCS_GDT K 60 K 60 5 8 33 3 3 9 12 23 25 32 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT T 61 T 61 5 11 33 3 5 10 15 23 26 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT K 62 K 62 6 26 33 3 9 14 19 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT A 63 A 63 8 26 33 6 11 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT T 64 T 64 8 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 65 I 65 8 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT N 66 N 66 8 26 33 4 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 67 I 67 8 26 33 8 14 17 20 26 31 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT D 68 D 68 8 26 33 5 11 17 20 22 30 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT A 69 A 69 8 26 33 5 11 17 20 22 28 33 37 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 70 I 70 8 26 33 4 11 17 20 22 31 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT S 71 S 71 8 26 33 3 6 12 19 21 23 26 36 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT G 72 G 72 5 26 33 3 6 7 15 17 21 22 29 36 46 51 55 59 62 63 66 68 71 75 78 LCS_GDT F 73 F 73 9 26 33 4 10 12 20 22 24 31 35 41 46 49 51 55 61 62 66 68 71 73 78 LCS_GDT A 74 A 74 12 26 33 3 12 17 20 22 29 33 37 42 46 51 53 59 62 63 66 68 71 75 78 LCS_GDT Y 75 Y 75 12 26 33 4 11 17 20 22 29 33 37 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 76 E 76 12 26 33 6 14 17 20 26 31 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT Y 77 Y 77 12 26 33 8 14 18 20 26 31 35 39 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT T 78 T 78 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT L 79 L 79 12 26 33 6 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT E 80 E 80 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT I 81 I 81 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT N 82 N 82 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT G 83 G 83 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT K 84 K 84 12 26 33 8 14 17 20 25 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT S 85 S 85 12 26 33 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT L 86 L 86 11 26 33 3 3 12 20 22 29 33 37 41 47 51 56 59 62 63 66 68 71 75 78 LCS_GDT K 87 K 87 4 26 33 1 4 9 15 22 24 25 35 36 43 48 52 59 62 63 66 68 71 75 78 LCS_GDT K 88 K 88 3 4 33 0 3 3 6 6 6 9 14 17 23 27 28 37 41 45 51 56 62 69 74 LCS_GDT Y 89 Y 89 3 3 33 0 3 3 3 3 4 7 13 13 15 17 18 24 34 37 40 42 48 51 58 LCS_GDT M 90 M 90 3 3 33 0 3 3 3 5 5 5 5 6 15 17 28 29 34 37 41 48 57 60 74 LCS_AVERAGE LCS_A: 21.93 ( 8.54 16.95 40.28 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 14 18 20 26 31 35 40 42 47 51 56 59 62 63 66 68 71 75 78 GDT PERCENT_AT 8.89 15.56 20.00 22.22 28.89 34.44 38.89 44.44 46.67 52.22 56.67 62.22 65.56 68.89 70.00 73.33 75.56 78.89 83.33 86.67 GDT RMS_LOCAL 0.34 0.61 1.08 1.07 1.78 2.07 2.36 2.84 2.94 3.21 3.44 3.79 3.97 4.31 4.47 4.72 4.94 5.24 5.77 5.95 GDT RMS_ALL_AT 8.27 8.69 7.77 9.38 7.62 7.61 7.66 8.08 8.01 7.78 7.88 7.75 7.81 7.57 7.49 7.48 7.43 7.40 7.34 7.34 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: D 14 D 14 # possible swapping detected: E 20 E 20 # possible swapping detected: F 21 F 21 # possible swapping detected: E 38 E 38 # possible swapping detected: E 39 E 39 # possible swapping detected: F 46 F 46 # possible swapping detected: F 54 F 54 # possible swapping detected: Y 55 Y 55 # possible swapping detected: F 73 F 73 # possible swapping detected: E 76 E 76 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 15.428 0 0.535 1.180 21.546 0.000 0.000 LGA T 2 T 2 12.556 0 0.133 0.136 15.890 0.476 0.272 LGA D 3 D 3 5.823 0 0.409 1.150 8.363 19.643 24.881 LGA L 4 L 4 5.384 0 0.162 0.973 10.974 33.690 18.452 LGA V 5 V 5 2.327 0 0.678 1.007 5.575 59.167 47.551 LGA A 6 A 6 3.803 0 0.101 0.098 4.520 53.810 49.333 LGA V 7 V 7 3.038 0 0.493 1.275 6.110 55.476 48.503 LGA W 8 W 8 3.832 0 0.072 1.116 8.600 46.786 26.327 LGA D 9 D 9 3.860 0 0.040 0.780 5.050 37.500 41.310 LGA V 10 V 10 3.870 0 0.117 1.028 4.320 46.667 43.469 LGA A 11 A 11 3.225 0 0.055 0.095 3.472 53.571 52.857 LGA L 12 L 12 1.482 0 0.593 1.547 6.330 69.286 56.726 LGA S 13 S 13 4.458 0 0.616 0.590 7.742 27.857 25.159 LGA D 14 D 14 9.592 0 0.274 1.038 13.928 3.333 1.667 LGA G 15 G 15 5.679 0 0.359 0.359 6.479 31.310 31.310 LGA V 16 V 16 1.798 0 0.032 0.107 5.119 48.095 47.415 LGA H 17 H 17 4.271 0 0.155 1.262 10.830 45.119 20.286 LGA K 18 K 18 2.046 0 0.019 0.805 10.374 52.262 33.757 LGA I 19 I 19 6.087 0 0.036 0.125 12.138 24.048 12.440 LGA E 20 E 20 3.657 0 0.046 1.435 6.547 28.571 44.180 LGA F 21 F 21 7.248 0 0.189 1.270 16.714 17.500 6.407 LGA E 22 E 22 5.148 0 0.055 1.037 8.463 16.429 27.619 LGA H 23 H 23 8.988 0 0.031 0.910 16.373 5.595 2.238 LGA G 24 G 24 7.833 0 0.150 0.150 11.274 3.095 3.095 LGA T 25 T 25 11.782 0 0.715 0.629 14.013 0.119 0.068 LGA T 26 T 26 10.330 0 0.071 1.216 12.320 2.381 1.361 LGA S 27 S 27 4.229 0 0.061 0.082 6.466 32.143 39.286 LGA G 28 G 28 6.589 0 0.113 0.113 6.589 18.571 18.571 LGA K 29 K 29 1.902 0 0.056 1.479 9.708 54.286 42.222 LGA R 30 R 30 4.145 0 0.078 0.677 16.479 43.571 17.316 LGA V 31 V 31 1.566 0 0.148 1.007 3.868 70.833 66.327 LGA V 32 V 32 2.941 0 0.075 0.346 5.417 62.976 49.524 LGA Y 33 Y 33 0.271 0 0.024 1.371 5.243 80.000 61.865 LGA V 34 V 34 1.469 0 0.092 0.985 4.773 88.214 74.694 LGA D 35 D 35 1.689 0 0.665 0.833 5.392 72.976 58.929 LGA G 36 G 36 4.280 0 0.118 0.118 4.280 40.238 40.238 LGA K 37 K 37 3.487 0 0.079 1.103 5.021 57.500 45.661 LGA E 38 E 38 2.718 0 0.086 0.685 3.598 51.905 55.873 LGA E 39 E 39 2.932 0 0.031 1.440 5.152 51.905 46.984 LGA I 40 I 40 2.808 0 0.112 0.197 5.037 51.905 50.833 LGA R 41 R 41 5.857 0 0.602 1.464 17.891 29.048 11.039 LGA K 42 K 42 6.155 0 0.192 0.848 7.305 13.571 15.132 LGA E 43 E 43 9.334 0 0.659 0.906 11.794 1.548 0.952 LGA W 44 W 44 11.329 0 0.093 1.012 17.023 0.000 0.000 LGA M 45 M 45 9.357 0 0.104 0.729 11.412 0.357 1.250 LGA F 46 F 46 12.327 0 0.628 0.584 17.714 0.000 0.000 LGA K 47 K 47 10.714 0 0.124 0.824 14.950 0.000 0.000 LGA L 48 L 48 11.868 0 0.679 1.083 14.500 0.000 0.000 LGA V 49 V 49 11.584 0 0.227 1.192 13.832 0.000 0.000 LGA G 50 G 50 13.383 0 0.633 0.633 13.383 0.000 0.000 LGA K 51 K 51 13.029 0 0.037 0.961 19.820 0.000 0.000 LGA E 52 E 52 13.200 0 0.079 1.006 14.530 0.000 0.000 LGA T 53 T 53 13.253 0 0.100 1.042 15.823 0.000 0.000 LGA F 54 F 54 12.844 0 0.167 1.187 14.453 0.000 0.000 LGA Y 55 Y 55 13.227 0 0.079 0.335 15.880 0.000 0.000 LGA V 56 V 56 11.612 0 0.053 0.076 12.114 0.000 0.000 LGA G 57 G 57 13.340 0 0.302 0.302 13.340 0.000 0.000 LGA A 58 A 58 12.416 0 0.641 0.592 13.113 0.000 0.000 LGA A 59 A 59 9.730 0 0.277 0.281 11.167 7.738 6.190 LGA K 60 K 60 3.160 0 0.351 1.157 6.349 32.619 41.640 LGA T 61 T 61 2.500 0 0.172 0.229 3.363 65.119 67.279 LGA K 62 K 62 1.170 0 0.149 0.731 8.234 81.548 53.598 LGA A 63 A 63 0.998 0 0.049 0.082 1.735 90.476 86.952 LGA T 64 T 64 1.117 0 0.020 0.135 1.690 77.143 82.857 LGA I 65 I 65 2.215 0 0.054 0.541 4.053 66.786 58.571 LGA N 66 N 66 2.864 0 0.082 1.116 7.171 52.143 41.012 LGA I 67 I 67 5.278 0 0.072 0.121 6.987 26.548 21.429 LGA D 68 D 68 6.973 0 0.068 0.823 8.351 11.190 10.476 LGA A 69 A 69 9.592 0 0.109 0.150 11.053 1.548 1.238 LGA I 70 I 70 8.456 0 0.573 1.385 8.910 3.810 6.726 LGA S 71 S 71 10.621 0 0.192 0.196 11.976 0.119 0.079 LGA G 72 G 72 11.501 0 0.267 0.267 12.120 0.000 0.000 LGA F 73 F 73 14.445 0 0.340 0.719 19.175 0.000 0.000 LGA A 74 A 74 10.983 0 0.119 0.154 11.844 0.000 0.095 LGA Y 75 Y 75 9.439 0 0.104 0.225 15.383 2.262 0.754 LGA E 76 E 76 6.465 0 0.056 0.808 7.492 17.500 20.053 LGA Y 77 Y 77 5.073 0 0.153 1.448 15.451 32.024 13.095 LGA T 78 T 78 3.526 0 0.078 0.088 4.135 45.119 48.231 LGA L 79 L 79 2.904 0 0.057 1.051 4.435 55.357 52.857 LGA E 80 E 80 2.005 0 0.045 0.247 2.313 64.762 76.085 LGA I 81 I 81 2.304 0 0.013 1.120 5.263 64.762 58.036 LGA N 82 N 82 2.268 0 0.068 0.113 3.156 62.857 60.060 LGA G 83 G 83 1.815 0 0.091 0.091 2.004 68.810 68.810 LGA K 84 K 84 2.488 0 0.048 0.893 4.438 62.857 51.429 LGA S 85 S 85 2.973 0 0.041 0.699 5.246 44.405 46.349 LGA L 86 L 86 5.973 0 0.595 0.570 10.019 17.500 14.940 LGA K 87 K 87 8.437 0 0.607 0.964 10.013 4.048 8.624 LGA K 88 K 88 14.134 0 0.622 0.959 16.855 0.000 0.000 LGA Y 89 Y 89 17.943 0 0.681 1.337 22.587 0.000 0.000 LGA M 90 M 90 17.045 0 0.198 1.456 19.655 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 7.326 7.275 8.504 29.582 26.232 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 40 2.84 38.889 34.749 1.360 LGA_LOCAL RMSD: 2.840 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.082 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 7.326 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.102127 * X + 0.938131 * Y + -0.330878 * Z + 48.493652 Y_new = -0.753632 * X + 0.290074 * Y + 0.589827 * Z + 22.482946 Z_new = 0.649314 * X + 0.189123 * Y + 0.736630 * Z + -0.697152 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.436104 -0.706682 0.251313 [DEG: -82.2827 -40.4899 14.3992 ] ZXZ: -2.630362 0.742723 1.287371 [DEG: -150.7087 42.5549 73.7609 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS047_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS047_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 40 2.84 34.749 7.33 REMARK ---------------------------------------------------------- MOLECULE T0540TS047_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 1 N MET 1 25.278 10.401 11.702 1.00 0.00 N ATOM 2 CA MET 1 24.501 11.623 11.402 1.00 0.00 C ATOM 3 CB MET 1 23.261 11.691 12.306 1.00 0.00 C ATOM 4 CG MET 1 22.241 10.596 11.976 1.00 0.00 C ATOM 5 SD MET 1 20.733 10.596 12.994 1.00 0.00 S ATOM 6 CE MET 1 19.945 9.236 12.084 1.00 0.00 C ATOM 7 C MET 1 25.337 12.840 11.623 1.00 0.00 C ATOM 8 O MET 1 25.575 13.622 10.707 1.00 0.00 O ATOM 9 N THR 2 25.777 13.049 12.874 1.00 0.00 N ATOM 10 CA THR 2 26.588 14.191 13.170 1.00 0.00 C ATOM 11 CB THR 2 26.808 14.361 14.640 1.00 0.00 C ATOM 12 OG1 THR 2 27.479 13.227 15.168 1.00 0.00 O ATOM 13 CG2 THR 2 25.441 14.542 15.324 1.00 0.00 C ATOM 14 C THR 2 27.940 14.061 12.538 1.00 0.00 C ATOM 15 O THR 2 28.415 14.989 11.887 1.00 0.00 O ATOM 16 N ASP 3 28.586 12.887 12.687 1.00 0.00 N ATOM 17 CA ASP 3 29.933 12.762 12.203 1.00 0.00 C ATOM 18 CB ASP 3 30.821 11.888 13.107 1.00 0.00 C ATOM 19 CG ASP 3 31.065 12.658 14.397 1.00 0.00 C ATOM 20 OD1 ASP 3 31.302 13.892 14.304 1.00 0.00 O ATOM 21 OD2 ASP 3 31.021 12.029 15.487 1.00 0.00 O ATOM 22 C ASP 3 29.933 12.147 10.842 1.00 0.00 C ATOM 23 O ASP 3 29.647 10.963 10.679 1.00 0.00 O ATOM 24 N LEU 4 30.242 12.958 9.815 1.00 0.00 N ATOM 25 CA LEU 4 30.330 12.445 8.478 1.00 0.00 C ATOM 26 CB LEU 4 29.089 12.692 7.605 1.00 0.00 C ATOM 27 CG LEU 4 27.899 11.783 7.960 1.00 0.00 C ATOM 28 CD1 LEU 4 27.377 12.040 9.376 1.00 0.00 C ATOM 29 CD2 LEU 4 26.795 11.883 6.901 1.00 0.00 C ATOM 30 C LEU 4 31.515 13.068 7.805 1.00 0.00 C ATOM 31 O LEU 4 32.010 14.113 8.224 1.00 0.00 O ATOM 32 N VAL 5 31.978 12.438 6.708 1.00 0.00 N ATOM 33 CA VAL 5 33.185 12.785 5.998 1.00 0.00 C ATOM 34 CB VAL 5 33.444 11.854 4.844 1.00 0.00 C ATOM 35 CG1 VAL 5 34.733 12.273 4.124 1.00 0.00 C ATOM 36 CG2 VAL 5 33.461 10.408 5.371 1.00 0.00 C ATOM 37 C VAL 5 33.137 14.181 5.459 1.00 0.00 C ATOM 38 O VAL 5 32.098 14.785 5.362 1.00 0.00 O ATOM 39 N ALA 6 34.246 14.851 5.161 1.00 0.00 N ATOM 40 CA ALA 6 33.990 16.077 4.452 1.00 0.00 C ATOM 41 CB ALA 6 34.793 17.278 4.970 1.00 0.00 C ATOM 42 C ALA 6 34.418 15.728 3.058 1.00 0.00 C ATOM 43 O ALA 6 35.470 15.123 2.885 1.00 0.00 O ATOM 44 N VAL 7 33.645 16.063 2.004 1.00 0.00 N ATOM 45 CA VAL 7 34.057 15.412 0.784 1.00 0.00 C ATOM 46 CB VAL 7 32.940 14.570 0.247 1.00 0.00 C ATOM 47 CG1 VAL 7 31.856 15.492 -0.331 1.00 0.00 C ATOM 48 CG2 VAL 7 33.515 13.515 -0.701 1.00 0.00 C ATOM 49 C VAL 7 34.556 16.329 -0.319 1.00 0.00 C ATOM 50 O VAL 7 34.218 16.164 -1.485 1.00 0.00 O ATOM 51 N TRP 8 35.532 17.203 -0.065 1.00 0.00 N ATOM 52 CA TRP 8 35.830 18.206 -1.055 1.00 0.00 C ATOM 53 CB TRP 8 36.568 19.427 -0.472 1.00 0.00 C ATOM 54 CG TRP 8 37.810 19.150 0.343 1.00 0.00 C ATOM 55 CD2 TRP 8 39.143 19.106 -0.181 1.00 0.00 C ATOM 56 CD1 TRP 8 37.923 18.961 1.686 1.00 0.00 C ATOM 57 NE1 TRP 8 39.246 18.832 2.033 1.00 0.00 N ATOM 58 CE2 TRP 8 40.009 18.912 0.894 1.00 0.00 C ATOM 59 CE3 TRP 8 39.609 19.217 -1.453 1.00 0.00 C ATOM 60 CZ2 TRP 8 41.356 18.825 0.711 1.00 0.00 C ATOM 61 CZ3 TRP 8 40.969 19.142 -1.641 1.00 0.00 C ATOM 62 CH2 TRP 8 41.818 18.949 -0.574 1.00 0.00 C ATOM 63 C TRP 8 36.525 17.728 -2.300 1.00 0.00 C ATOM 64 O TRP 8 37.236 16.729 -2.323 1.00 0.00 O ATOM 65 N ASP 9 36.258 18.441 -3.414 1.00 0.00 N ATOM 66 CA ASP 9 36.875 18.200 -4.688 1.00 0.00 C ATOM 67 CB ASP 9 35.842 17.785 -5.753 1.00 0.00 C ATOM 68 CG ASP 9 36.546 17.098 -6.915 1.00 0.00 C ATOM 69 OD1 ASP 9 37.805 17.020 -6.892 1.00 0.00 O ATOM 70 OD2 ASP 9 35.832 16.633 -7.839 1.00 0.00 O ATOM 71 C ASP 9 37.443 19.536 -5.089 1.00 0.00 C ATOM 72 O ASP 9 36.730 20.540 -5.052 1.00 0.00 O ATOM 73 N VAL 10 38.750 19.600 -5.444 1.00 0.00 N ATOM 74 CA VAL 10 39.332 20.869 -5.822 1.00 0.00 C ATOM 75 CB VAL 10 40.457 21.285 -4.921 1.00 0.00 C ATOM 76 CG1 VAL 10 41.019 22.629 -5.414 1.00 0.00 C ATOM 77 CG2 VAL 10 39.944 21.314 -3.483 1.00 0.00 C ATOM 78 C VAL 10 39.958 20.682 -7.176 1.00 0.00 C ATOM 79 O VAL 10 40.518 19.621 -7.454 1.00 0.00 O ATOM 80 N ALA 11 39.869 21.682 -8.082 1.00 0.00 N ATOM 81 CA ALA 11 40.592 21.454 -9.301 1.00 0.00 C ATOM 82 CB ALA 11 39.802 21.265 -10.578 1.00 0.00 C ATOM 83 C ALA 11 41.509 22.583 -9.601 1.00 0.00 C ATOM 84 O ALA 11 41.163 23.760 -9.508 1.00 0.00 O ATOM 85 N LEU 12 42.739 22.201 -9.974 1.00 0.00 N ATOM 86 CA LEU 12 43.766 23.111 -10.372 1.00 0.00 C ATOM 87 CB LEU 12 45.126 22.404 -10.533 1.00 0.00 C ATOM 88 CG LEU 12 46.276 23.328 -10.974 1.00 0.00 C ATOM 89 CD1 LEU 12 46.587 24.376 -9.896 1.00 0.00 C ATOM 90 CD2 LEU 12 47.514 22.515 -11.393 1.00 0.00 C ATOM 91 C LEU 12 43.373 23.682 -11.697 1.00 0.00 C ATOM 92 O LEU 12 43.599 24.858 -11.985 1.00 0.00 O ATOM 93 N SER 13 42.781 22.825 -12.550 1.00 0.00 N ATOM 94 CA SER 13 42.363 23.215 -13.863 1.00 0.00 C ATOM 95 CB SER 13 43.475 23.113 -14.920 1.00 0.00 C ATOM 96 OG SER 13 43.910 21.767 -15.040 1.00 0.00 O ATOM 97 C SER 13 41.267 22.275 -14.250 1.00 0.00 C ATOM 98 O SER 13 40.828 21.450 -13.451 1.00 0.00 O ATOM 99 N ASP 14 40.795 22.381 -15.504 1.00 0.00 N ATOM 100 CA ASP 14 39.705 21.575 -15.963 1.00 0.00 C ATOM 101 CB ASP 14 39.300 21.892 -17.409 1.00 0.00 C ATOM 102 CG ASP 14 38.594 23.239 -17.416 1.00 0.00 C ATOM 103 OD1 ASP 14 37.780 23.481 -16.484 1.00 0.00 O ATOM 104 OD2 ASP 14 38.858 24.045 -18.347 1.00 0.00 O ATOM 105 C ASP 14 40.097 20.135 -15.905 1.00 0.00 C ATOM 106 O ASP 14 39.270 19.285 -15.579 1.00 0.00 O ATOM 107 N GLY 15 41.359 19.805 -16.234 1.00 0.00 N ATOM 108 CA GLY 15 41.708 18.418 -16.164 1.00 0.00 C ATOM 109 C GLY 15 42.535 18.239 -14.935 1.00 0.00 C ATOM 110 O GLY 15 43.738 18.486 -14.944 1.00 0.00 O ATOM 111 N VAL 16 41.899 17.770 -13.842 1.00 0.00 N ATOM 112 CA VAL 16 42.620 17.596 -12.618 1.00 0.00 C ATOM 113 CB VAL 16 42.355 18.665 -11.604 1.00 0.00 C ATOM 114 CG1 VAL 16 42.799 20.022 -12.174 1.00 0.00 C ATOM 115 CG2 VAL 16 40.866 18.596 -11.225 1.00 0.00 C ATOM 116 C VAL 16 42.167 16.325 -11.985 1.00 0.00 C ATOM 117 O VAL 16 41.026 15.895 -12.152 1.00 0.00 O ATOM 118 N HIS 17 43.090 15.694 -11.240 1.00 0.00 N ATOM 119 CA HIS 17 42.830 14.487 -10.518 1.00 0.00 C ATOM 120 ND1 HIS 17 44.383 11.709 -9.184 1.00 0.00 N ATOM 121 CG HIS 17 43.577 12.049 -10.248 1.00 0.00 C ATOM 122 CB HIS 17 43.716 13.328 -11.016 1.00 0.00 C ATOM 123 NE2 HIS 17 42.966 10.021 -9.470 1.00 0.00 N ATOM 124 CD2 HIS 17 42.716 11.007 -10.409 1.00 0.00 C ATOM 125 CE1 HIS 17 43.975 10.487 -8.757 1.00 0.00 C ATOM 126 C HIS 17 43.201 14.776 -9.097 1.00 0.00 C ATOM 127 O HIS 17 44.366 15.038 -8.805 1.00 0.00 O ATOM 128 N LYS 18 42.214 14.759 -8.173 1.00 0.00 N ATOM 129 CA LYS 18 42.505 15.024 -6.789 1.00 0.00 C ATOM 130 CB LYS 18 41.658 16.156 -6.174 1.00 0.00 C ATOM 131 CG LYS 18 42.152 17.585 -6.404 1.00 0.00 C ATOM 132 CD LYS 18 43.450 17.933 -5.674 1.00 0.00 C ATOM 133 CE LYS 18 43.760 19.431 -5.667 1.00 0.00 C ATOM 134 NZ LYS 18 43.855 19.938 -7.054 1.00 0.00 N ATOM 135 C LYS 18 42.158 13.809 -5.989 1.00 0.00 C ATOM 136 O LYS 18 41.039 13.305 -6.059 1.00 0.00 O ATOM 137 N ILE 19 43.112 13.320 -5.173 1.00 0.00 N ATOM 138 CA ILE 19 42.846 12.171 -4.358 1.00 0.00 C ATOM 139 CB ILE 19 44.035 11.272 -4.167 1.00 0.00 C ATOM 140 CG2 ILE 19 43.655 10.189 -3.142 1.00 0.00 C ATOM 141 CG1 ILE 19 44.503 10.703 -5.514 1.00 0.00 C ATOM 142 CD1 ILE 19 45.871 10.022 -5.450 1.00 0.00 C ATOM 143 C ILE 19 42.473 12.681 -3.006 1.00 0.00 C ATOM 144 O ILE 19 43.209 13.466 -2.409 1.00 0.00 O ATOM 145 N GLU 20 41.305 12.241 -2.487 1.00 0.00 N ATOM 146 CA GLU 20 40.873 12.731 -1.211 1.00 0.00 C ATOM 147 CB GLU 20 39.433 13.266 -1.210 1.00 0.00 C ATOM 148 CG GLU 20 38.368 12.168 -1.292 1.00 0.00 C ATOM 149 CD GLU 20 38.635 11.297 -2.514 1.00 0.00 C ATOM 150 OE1 GLU 20 38.910 11.860 -3.605 1.00 0.00 O ATOM 151 OE2 GLU 20 38.569 10.046 -2.361 1.00 0.00 O ATOM 152 C GLU 20 40.910 11.606 -0.226 1.00 0.00 C ATOM 153 O GLU 20 40.421 10.510 -0.492 1.00 0.00 O ATOM 154 N PHE 21 41.500 11.868 0.958 1.00 0.00 N ATOM 155 CA PHE 21 41.596 10.888 2.001 1.00 0.00 C ATOM 156 CB PHE 21 43.023 10.552 2.450 1.00 0.00 C ATOM 157 CG PHE 21 43.819 9.951 1.348 1.00 0.00 C ATOM 158 CD1 PHE 21 43.806 8.594 1.135 1.00 0.00 C ATOM 159 CD2 PHE 21 44.592 10.750 0.538 1.00 0.00 C ATOM 160 CE1 PHE 21 44.549 8.046 0.116 1.00 0.00 C ATOM 161 CE2 PHE 21 45.338 10.209 -0.482 1.00 0.00 C ATOM 162 CZ PHE 21 45.315 8.852 -0.693 1.00 0.00 C ATOM 163 C PHE 21 41.014 11.545 3.207 1.00 0.00 C ATOM 164 O PHE 21 40.861 12.764 3.240 1.00 0.00 O ATOM 165 N GLU 22 40.664 10.745 4.232 1.00 0.00 N ATOM 166 CA GLU 22 40.141 11.325 5.431 1.00 0.00 C ATOM 167 CB GLU 22 38.820 10.709 5.922 1.00 0.00 C ATOM 168 CG GLU 22 37.600 11.071 5.073 1.00 0.00 C ATOM 169 CD GLU 22 37.581 10.157 3.858 1.00 0.00 C ATOM 170 OE1 GLU 22 37.692 8.918 4.050 1.00 0.00 O ATOM 171 OE2 GLU 22 37.457 10.686 2.720 1.00 0.00 O ATOM 172 C GLU 22 41.128 11.117 6.536 1.00 0.00 C ATOM 173 O GLU 22 41.890 10.150 6.542 1.00 0.00 O ATOM 174 N HIS 23 41.149 12.065 7.494 1.00 0.00 N ATOM 175 CA HIS 23 42.006 11.943 8.638 1.00 0.00 C ATOM 176 ND1 HIS 23 43.983 13.329 11.093 1.00 0.00 N ATOM 177 CG HIS 23 44.074 12.930 9.775 1.00 0.00 C ATOM 178 CB HIS 23 42.994 13.117 8.753 1.00 0.00 C ATOM 179 NE2 HIS 23 46.000 12.426 10.840 1.00 0.00 N ATOM 180 CD2 HIS 23 45.309 12.380 9.641 1.00 0.00 C ATOM 181 CE1 HIS 23 45.162 13.006 11.680 1.00 0.00 C ATOM 182 C HIS 23 41.078 12.011 9.808 1.00 0.00 C ATOM 183 O HIS 23 40.357 12.994 9.970 1.00 0.00 O ATOM 184 N GLY 24 41.063 10.969 10.662 1.00 0.00 N ATOM 185 CA GLY 24 40.122 10.962 11.748 1.00 0.00 C ATOM 186 C GLY 24 40.847 10.974 13.054 1.00 0.00 C ATOM 187 O GLY 24 41.967 10.479 13.171 1.00 0.00 O ATOM 188 N THR 25 40.190 11.537 14.087 1.00 0.00 N ATOM 189 CA THR 25 40.778 11.619 15.392 1.00 0.00 C ATOM 190 CB THR 25 41.011 13.024 15.869 1.00 0.00 C ATOM 191 OG1 THR 25 39.789 13.743 15.904 1.00 0.00 O ATOM 192 CG2 THR 25 42.013 13.714 14.929 1.00 0.00 C ATOM 193 C THR 25 39.854 10.952 16.365 1.00 0.00 C ATOM 194 O THR 25 38.737 10.569 16.022 1.00 0.00 O ATOM 195 N THR 26 40.328 10.781 17.618 1.00 0.00 N ATOM 196 CA THR 26 39.596 10.109 18.658 1.00 0.00 C ATOM 197 CB THR 26 40.373 9.986 19.935 1.00 0.00 C ATOM 198 OG1 THR 26 40.706 11.275 20.430 1.00 0.00 O ATOM 199 CG2 THR 26 41.648 9.171 19.663 1.00 0.00 C ATOM 200 C THR 26 38.344 10.869 18.969 1.00 0.00 C ATOM 201 O THR 26 37.298 10.271 19.221 1.00 0.00 O ATOM 202 N SER 27 38.418 12.211 18.953 1.00 0.00 N ATOM 203 CA SER 27 37.291 13.031 19.298 1.00 0.00 C ATOM 204 CB SER 27 37.605 14.538 19.257 1.00 0.00 C ATOM 205 OG SER 27 37.882 14.946 17.924 1.00 0.00 O ATOM 206 C SER 27 36.195 12.773 18.308 1.00 0.00 C ATOM 207 O SER 27 35.029 13.056 18.578 1.00 0.00 O ATOM 208 N GLY 28 36.536 12.219 17.129 1.00 0.00 N ATOM 209 CA GLY 28 35.520 11.926 16.158 1.00 0.00 C ATOM 210 C GLY 28 35.598 12.907 15.023 1.00 0.00 C ATOM 211 O GLY 28 34.985 12.702 13.977 1.00 0.00 O ATOM 212 N LYS 29 36.364 14.000 15.190 1.00 0.00 N ATOM 213 CA LYS 29 36.455 14.980 14.145 1.00 0.00 C ATOM 214 CB LYS 29 37.214 16.251 14.567 1.00 0.00 C ATOM 215 CG LYS 29 36.585 17.007 15.741 1.00 0.00 C ATOM 216 CD LYS 29 35.170 17.522 15.472 1.00 0.00 C ATOM 217 CE LYS 29 34.578 18.313 16.640 1.00 0.00 C ATOM 218 NZ LYS 29 33.212 18.762 16.302 1.00 0.00 N ATOM 219 C LYS 29 37.221 14.376 13.011 1.00 0.00 C ATOM 220 O LYS 29 38.160 13.613 13.225 1.00 0.00 O ATOM 221 N ARG 30 36.826 14.699 11.762 1.00 0.00 N ATOM 222 CA ARG 30 37.538 14.140 10.652 1.00 0.00 C ATOM 223 CB ARG 30 36.782 12.971 10.006 1.00 0.00 C ATOM 224 CG ARG 30 37.693 12.024 9.234 1.00 0.00 C ATOM 225 CD ARG 30 36.953 10.818 8.660 1.00 0.00 C ATOM 226 NE ARG 30 36.349 10.087 9.809 1.00 0.00 N ATOM 227 CZ ARG 30 35.727 8.890 9.601 1.00 0.00 C ATOM 228 NH1 ARG 30 35.689 8.351 8.347 1.00 0.00 N ATOM 229 NH2 ARG 30 35.148 8.231 10.647 1.00 0.00 N ATOM 230 C ARG 30 37.707 15.234 9.638 1.00 0.00 C ATOM 231 O ARG 30 36.843 16.101 9.512 1.00 0.00 O ATOM 232 N VAL 31 38.840 15.231 8.900 1.00 0.00 N ATOM 233 CA VAL 31 39.110 16.253 7.928 1.00 0.00 C ATOM 234 CB VAL 31 40.279 17.138 8.274 1.00 0.00 C ATOM 235 CG1 VAL 31 39.957 17.927 9.554 1.00 0.00 C ATOM 236 CG2 VAL 31 41.542 16.265 8.383 1.00 0.00 C ATOM 237 C VAL 31 39.442 15.593 6.629 1.00 0.00 C ATOM 238 O VAL 31 39.799 14.414 6.597 1.00 0.00 O ATOM 239 N VAL 32 39.322 16.352 5.516 1.00 0.00 N ATOM 240 CA VAL 32 39.582 15.792 4.217 1.00 0.00 C ATOM 241 CB VAL 32 38.723 16.348 3.134 1.00 0.00 C ATOM 242 CG1 VAL 32 38.712 15.385 1.936 1.00 0.00 C ATOM 243 CG2 VAL 32 37.409 16.851 3.710 1.00 0.00 C ATOM 244 C VAL 32 40.907 16.333 3.792 1.00 0.00 C ATOM 245 O VAL 32 41.192 17.515 3.984 1.00 0.00 O ATOM 246 N TYR 33 41.755 15.479 3.193 1.00 0.00 N ATOM 247 CA TYR 33 43.015 15.976 2.719 1.00 0.00 C ATOM 248 CB TYR 33 44.199 15.640 3.651 1.00 0.00 C ATOM 249 CG TYR 33 44.607 14.209 3.696 1.00 0.00 C ATOM 250 CD1 TYR 33 45.468 13.700 2.754 1.00 0.00 C ATOM 251 CD2 TYR 33 44.163 13.386 4.704 1.00 0.00 C ATOM 252 CE1 TYR 33 45.870 12.385 2.804 1.00 0.00 C ATOM 253 CE2 TYR 33 44.560 12.069 4.759 1.00 0.00 C ATOM 254 CZ TYR 33 45.415 11.565 3.806 1.00 0.00 C ATOM 255 OH TYR 33 45.824 10.214 3.855 1.00 0.00 O ATOM 256 C TYR 33 43.250 15.462 1.330 1.00 0.00 C ATOM 257 O TYR 33 42.995 14.296 1.035 1.00 0.00 O ATOM 258 N VAL 34 43.736 16.337 0.423 1.00 0.00 N ATOM 259 CA VAL 34 43.963 15.919 -0.936 1.00 0.00 C ATOM 260 CB VAL 34 43.417 16.876 -1.950 1.00 0.00 C ATOM 261 CG1 VAL 34 44.279 18.141 -1.934 1.00 0.00 C ATOM 262 CG2 VAL 34 43.362 16.173 -3.309 1.00 0.00 C ATOM 263 C VAL 34 45.440 15.838 -1.126 1.00 0.00 C ATOM 264 O VAL 34 46.184 16.655 -0.588 1.00 0.00 O ATOM 265 N ASP 35 45.920 14.871 -1.931 1.00 0.00 N ATOM 266 CA ASP 35 47.339 14.704 -1.961 1.00 0.00 C ATOM 267 CB ASP 35 48.118 15.970 -2.385 1.00 0.00 C ATOM 268 CG ASP 35 49.579 15.628 -2.645 1.00 0.00 C ATOM 269 OD1 ASP 35 49.886 14.421 -2.824 1.00 0.00 O ATOM 270 OD2 ASP 35 50.409 16.577 -2.657 1.00 0.00 O ATOM 271 C ASP 35 47.671 14.348 -0.544 1.00 0.00 C ATOM 272 O ASP 35 46.929 13.606 0.090 1.00 0.00 O ATOM 273 N GLY 36 48.854 14.759 -0.061 1.00 0.00 N ATOM 274 CA GLY 36 49.375 14.549 1.265 1.00 0.00 C ATOM 275 C GLY 36 48.917 15.478 2.368 1.00 0.00 C ATOM 276 O GLY 36 48.988 15.107 3.537 1.00 0.00 O ATOM 277 N LYS 37 48.525 16.730 2.047 1.00 0.00 N ATOM 278 CA LYS 37 48.435 17.759 3.056 1.00 0.00 C ATOM 279 CB LYS 37 48.723 19.152 2.475 1.00 0.00 C ATOM 280 CG LYS 37 49.022 20.199 3.541 1.00 0.00 C ATOM 281 CD LYS 37 49.548 21.522 2.980 1.00 0.00 C ATOM 282 CE LYS 37 50.926 21.413 2.325 1.00 0.00 C ATOM 283 NZ LYS 37 50.784 20.965 0.924 1.00 0.00 N ATOM 284 C LYS 37 47.139 17.858 3.800 1.00 0.00 C ATOM 285 O LYS 37 46.077 17.558 3.263 1.00 0.00 O ATOM 286 N GLU 38 47.222 18.302 5.085 1.00 0.00 N ATOM 287 CA GLU 38 46.063 18.544 5.902 1.00 0.00 C ATOM 288 CB GLU 38 46.157 17.980 7.330 1.00 0.00 C ATOM 289 CG GLU 38 44.836 18.086 8.098 1.00 0.00 C ATOM 290 CD GLU 38 45.049 17.490 9.480 1.00 0.00 C ATOM 291 OE1 GLU 38 46.234 17.307 9.863 1.00 0.00 O ATOM 292 OE2 GLU 38 44.034 17.211 10.174 1.00 0.00 O ATOM 293 C GLU 38 45.920 20.036 6.024 1.00 0.00 C ATOM 294 O GLU 38 46.691 20.702 6.714 1.00 0.00 O ATOM 295 N GLU 39 44.939 20.581 5.280 1.00 0.00 N ATOM 296 CA GLU 39 44.588 21.966 5.167 1.00 0.00 C ATOM 297 CB GLU 39 43.789 22.251 3.884 1.00 0.00 C ATOM 298 CG GLU 39 44.533 21.881 2.597 1.00 0.00 C ATOM 299 CD GLU 39 44.103 20.481 2.167 1.00 0.00 C ATOM 300 OE1 GLU 39 43.979 19.593 3.052 1.00 0.00 O ATOM 301 OE2 GLU 39 43.878 20.285 0.943 1.00 0.00 O ATOM 302 C GLU 39 43.749 22.464 6.314 1.00 0.00 C ATOM 303 O GLU 39 43.764 23.638 6.619 1.00 0.00 O ATOM 304 N ILE 40 42.923 21.671 6.998 1.00 0.00 N ATOM 305 CA ILE 40 42.099 22.395 7.936 1.00 0.00 C ATOM 306 CB ILE 40 40.871 21.623 8.313 1.00 0.00 C ATOM 307 CG2 ILE 40 40.160 22.357 9.457 1.00 0.00 C ATOM 308 CG1 ILE 40 39.993 21.405 7.072 1.00 0.00 C ATOM 309 CD1 ILE 40 38.888 20.376 7.295 1.00 0.00 C ATOM 310 C ILE 40 42.859 22.701 9.195 1.00 0.00 C ATOM 311 O ILE 40 43.326 21.802 9.893 1.00 0.00 O ATOM 312 N ARG 41 43.104 24.012 9.426 1.00 0.00 N ATOM 313 CA ARG 41 43.745 24.574 10.586 1.00 0.00 C ATOM 314 CB ARG 41 44.438 25.894 10.222 1.00 0.00 C ATOM 315 CG ARG 41 45.533 25.688 9.170 1.00 0.00 C ATOM 316 CD ARG 41 45.826 26.923 8.318 1.00 0.00 C ATOM 317 NE ARG 41 46.406 27.977 9.197 1.00 0.00 N ATOM 318 CZ ARG 41 46.411 29.270 8.761 1.00 0.00 C ATOM 319 NH1 ARG 41 45.854 29.578 7.554 1.00 0.00 N ATOM 320 NH2 ARG 41 46.973 30.253 9.522 1.00 0.00 N ATOM 321 C ARG 41 42.836 24.835 11.761 1.00 0.00 C ATOM 322 O ARG 41 43.165 24.485 12.894 1.00 0.00 O ATOM 323 N LYS 42 41.650 25.438 11.516 1.00 0.00 N ATOM 324 CA LYS 42 40.870 25.942 12.618 1.00 0.00 C ATOM 325 CB LYS 42 40.798 27.476 12.606 1.00 0.00 C ATOM 326 CG LYS 42 42.186 28.114 12.543 1.00 0.00 C ATOM 327 CD LYS 42 42.190 29.590 12.139 1.00 0.00 C ATOM 328 CE LYS 42 43.593 30.113 11.826 1.00 0.00 C ATOM 329 NZ LYS 42 44.507 29.800 12.947 1.00 0.00 N ATOM 330 C LYS 42 39.464 25.440 12.541 1.00 0.00 C ATOM 331 O LYS 42 39.030 24.908 11.521 1.00 0.00 O ATOM 332 N GLU 43 38.715 25.602 13.653 1.00 0.00 N ATOM 333 CA GLU 43 37.353 25.153 13.729 1.00 0.00 C ATOM 334 CB GLU 43 37.028 24.379 15.024 1.00 0.00 C ATOM 335 CG GLU 43 37.616 22.967 15.121 1.00 0.00 C ATOM 336 CD GLU 43 36.543 21.971 14.693 1.00 0.00 C ATOM 337 OE1 GLU 43 36.361 21.781 13.461 1.00 0.00 O ATOM 338 OE2 GLU 43 35.892 21.385 15.599 1.00 0.00 O ATOM 339 C GLU 43 36.459 26.350 13.755 1.00 0.00 C ATOM 340 O GLU 43 36.730 27.324 14.455 1.00 0.00 O ATOM 341 N TRP 44 35.371 26.312 12.963 1.00 0.00 N ATOM 342 CA TRP 44 34.409 27.372 12.999 1.00 0.00 C ATOM 343 CB TRP 44 34.663 28.492 11.976 1.00 0.00 C ATOM 344 CG TRP 44 35.906 29.306 12.249 1.00 0.00 C ATOM 345 CD2 TRP 44 36.032 30.242 13.330 1.00 0.00 C ATOM 346 CD1 TRP 44 37.102 29.309 11.594 1.00 0.00 C ATOM 347 NE1 TRP 44 37.965 30.195 12.196 1.00 0.00 N ATOM 348 CE2 TRP 44 37.318 30.777 13.267 1.00 0.00 C ATOM 349 CE3 TRP 44 35.148 30.628 14.297 1.00 0.00 C ATOM 350 CZ2 TRP 44 37.742 31.702 14.176 1.00 0.00 C ATOM 351 CZ3 TRP 44 35.578 31.564 15.209 1.00 0.00 C ATOM 352 CH2 TRP 44 36.850 32.091 15.151 1.00 0.00 C ATOM 353 C TRP 44 33.085 26.762 12.667 1.00 0.00 C ATOM 354 O TRP 44 33.011 25.790 11.918 1.00 0.00 O ATOM 355 N MET 45 31.996 27.309 13.236 1.00 0.00 N ATOM 356 CA MET 45 30.700 26.785 12.919 1.00 0.00 C ATOM 357 CB MET 45 29.897 26.308 14.142 1.00 0.00 C ATOM 358 CG MET 45 28.477 25.859 13.787 1.00 0.00 C ATOM 359 SD MET 45 27.500 25.238 15.187 1.00 0.00 S ATOM 360 CE MET 45 25.927 25.197 14.280 1.00 0.00 C ATOM 361 C MET 45 29.904 27.879 12.290 1.00 0.00 C ATOM 362 O MET 45 29.792 28.975 12.838 1.00 0.00 O ATOM 363 N PHE 46 29.330 27.601 11.105 1.00 0.00 N ATOM 364 CA PHE 46 28.526 28.576 10.428 1.00 0.00 C ATOM 365 CB PHE 46 29.169 29.168 9.161 1.00 0.00 C ATOM 366 CG PHE 46 30.270 30.066 9.600 1.00 0.00 C ATOM 367 CD1 PHE 46 29.992 31.344 10.023 1.00 0.00 C ATOM 368 CD2 PHE 46 31.576 29.639 9.585 1.00 0.00 C ATOM 369 CE1 PHE 46 31.006 32.181 10.431 1.00 0.00 C ATOM 370 CE2 PHE 46 32.592 30.471 9.992 1.00 0.00 C ATOM 371 CZ PHE 46 32.310 31.745 10.417 1.00 0.00 C ATOM 372 C PHE 46 27.260 27.922 10.006 1.00 0.00 C ATOM 373 O PHE 46 27.176 26.699 9.887 1.00 0.00 O ATOM 374 N LYS 47 26.225 28.748 9.778 1.00 0.00 N ATOM 375 CA LYS 47 24.959 28.199 9.428 1.00 0.00 C ATOM 376 CB LYS 47 23.879 28.613 10.442 1.00 0.00 C ATOM 377 CG LYS 47 22.649 27.711 10.488 1.00 0.00 C ATOM 378 CD LYS 47 21.844 27.905 11.777 1.00 0.00 C ATOM 379 CE LYS 47 20.650 26.962 11.928 1.00 0.00 C ATOM 380 NZ LYS 47 19.501 27.463 11.143 1.00 0.00 N ATOM 381 C LYS 47 24.581 28.736 8.087 1.00 0.00 C ATOM 382 O LYS 47 24.487 29.946 7.893 1.00 0.00 O ATOM 383 N LEU 48 24.396 27.826 7.112 1.00 0.00 N ATOM 384 CA LEU 48 23.874 28.185 5.828 1.00 0.00 C ATOM 385 CB LEU 48 24.404 27.338 4.660 1.00 0.00 C ATOM 386 CG LEU 48 25.892 27.572 4.368 1.00 0.00 C ATOM 387 CD1 LEU 48 26.143 29.020 3.917 1.00 0.00 C ATOM 388 CD2 LEU 48 26.767 27.151 5.559 1.00 0.00 C ATOM 389 C LEU 48 22.447 27.860 6.008 1.00 0.00 C ATOM 390 O LEU 48 22.113 27.297 7.046 1.00 0.00 O ATOM 391 N VAL 49 21.586 28.177 5.026 1.00 0.00 N ATOM 392 CA VAL 49 20.176 28.028 5.239 1.00 0.00 C ATOM 393 CB VAL 49 19.371 28.323 4.011 1.00 0.00 C ATOM 394 CG1 VAL 49 17.888 28.062 4.316 1.00 0.00 C ATOM 395 CG2 VAL 49 19.681 29.761 3.564 1.00 0.00 C ATOM 396 C VAL 49 19.843 26.638 5.676 1.00 0.00 C ATOM 397 O VAL 49 19.776 25.706 4.875 1.00 0.00 O ATOM 398 N GLY 50 19.634 26.492 7.000 1.00 0.00 N ATOM 399 CA GLY 50 19.176 25.293 7.630 1.00 0.00 C ATOM 400 C GLY 50 20.258 24.269 7.766 1.00 0.00 C ATOM 401 O GLY 50 20.038 23.241 8.403 1.00 0.00 O ATOM 402 N LYS 51 21.460 24.497 7.204 1.00 0.00 N ATOM 403 CA LYS 51 22.432 23.449 7.319 1.00 0.00 C ATOM 404 CB LYS 51 22.901 22.857 5.975 1.00 0.00 C ATOM 405 CG LYS 51 21.824 22.132 5.167 1.00 0.00 C ATOM 406 CD LYS 51 22.289 21.751 3.757 1.00 0.00 C ATOM 407 CE LYS 51 21.219 21.061 2.907 1.00 0.00 C ATOM 408 NZ LYS 51 20.423 22.074 2.174 1.00 0.00 N ATOM 409 C LYS 51 23.672 24.000 7.944 1.00 0.00 C ATOM 410 O LYS 51 23.966 25.189 7.840 1.00 0.00 O ATOM 411 N GLU 52 24.426 23.121 8.633 1.00 0.00 N ATOM 412 CA GLU 52 25.686 23.505 9.193 1.00 0.00 C ATOM 413 CB GLU 52 25.838 23.100 10.672 1.00 0.00 C ATOM 414 CG GLU 52 25.556 21.623 10.945 1.00 0.00 C ATOM 415 CD GLU 52 25.659 21.394 12.448 1.00 0.00 C ATOM 416 OE1 GLU 52 26.740 21.698 13.019 1.00 0.00 O ATOM 417 OE2 GLU 52 24.656 20.919 13.044 1.00 0.00 O ATOM 418 C GLU 52 26.721 22.806 8.370 1.00 0.00 C ATOM 419 O GLU 52 26.735 21.580 8.275 1.00 0.00 O ATOM 420 N THR 53 27.624 23.589 7.746 1.00 0.00 N ATOM 421 CA THR 53 28.592 23.017 6.853 1.00 0.00 C ATOM 422 CB THR 53 28.516 23.607 5.477 1.00 0.00 C ATOM 423 OG1 THR 53 28.766 25.004 5.528 1.00 0.00 O ATOM 424 CG2 THR 53 27.110 23.340 4.912 1.00 0.00 C ATOM 425 C THR 53 29.953 23.299 7.397 1.00 0.00 C ATOM 426 O THR 53 30.142 24.215 8.194 1.00 0.00 O ATOM 427 N PHE 54 30.946 22.488 6.983 1.00 0.00 N ATOM 428 CA PHE 54 32.279 22.689 7.473 1.00 0.00 C ATOM 429 CB PHE 54 33.067 21.381 7.677 1.00 0.00 C ATOM 430 CG PHE 54 32.412 20.643 8.795 1.00 0.00 C ATOM 431 CD1 PHE 54 32.750 20.906 10.104 1.00 0.00 C ATOM 432 CD2 PHE 54 31.454 19.691 8.532 1.00 0.00 C ATOM 433 CE1 PHE 54 32.142 20.227 11.134 1.00 0.00 C ATOM 434 CE2 PHE 54 30.842 19.009 9.557 1.00 0.00 C ATOM 435 CZ PHE 54 31.187 19.278 10.861 1.00 0.00 C ATOM 436 C PHE 54 33.008 23.525 6.467 1.00 0.00 C ATOM 437 O PHE 54 32.929 23.287 5.264 1.00 0.00 O ATOM 438 N TYR 55 33.745 24.547 6.945 1.00 0.00 N ATOM 439 CA TYR 55 34.456 25.415 6.051 1.00 0.00 C ATOM 440 CB TYR 55 34.384 26.898 6.439 1.00 0.00 C ATOM 441 CG TYR 55 33.036 27.402 6.063 1.00 0.00 C ATOM 442 CD1 TYR 55 31.915 27.072 6.790 1.00 0.00 C ATOM 443 CD2 TYR 55 32.905 28.228 4.973 1.00 0.00 C ATOM 444 CE1 TYR 55 30.679 27.554 6.423 1.00 0.00 C ATOM 445 CE2 TYR 55 31.675 28.713 4.602 1.00 0.00 C ATOM 446 CZ TYR 55 30.559 28.373 5.326 1.00 0.00 C ATOM 447 OH TYR 55 29.296 28.870 4.943 1.00 0.00 O ATOM 448 C TYR 55 35.893 25.029 6.091 1.00 0.00 C ATOM 449 O TYR 55 36.556 25.153 7.117 1.00 0.00 O ATOM 450 N VAL 56 36.405 24.540 4.944 1.00 0.00 N ATOM 451 CA VAL 56 37.771 24.125 4.893 1.00 0.00 C ATOM 452 CB VAL 56 37.930 22.759 4.280 1.00 0.00 C ATOM 453 CG1 VAL 56 39.426 22.404 4.207 1.00 0.00 C ATOM 454 CG2 VAL 56 37.087 21.763 5.094 1.00 0.00 C ATOM 455 C VAL 56 38.525 25.104 4.045 1.00 0.00 C ATOM 456 O VAL 56 38.147 25.383 2.911 1.00 0.00 O ATOM 457 N GLY 57 39.634 25.651 4.586 1.00 0.00 N ATOM 458 CA GLY 57 40.411 26.595 3.834 1.00 0.00 C ATOM 459 C GLY 57 41.683 25.911 3.444 1.00 0.00 C ATOM 460 O GLY 57 42.574 25.709 4.266 1.00 0.00 O ATOM 461 N ALA 58 41.793 25.543 2.151 1.00 0.00 N ATOM 462 CA ALA 58 42.955 24.850 1.672 1.00 0.00 C ATOM 463 CB ALA 58 42.695 24.047 0.386 1.00 0.00 C ATOM 464 C ALA 58 44.051 25.830 1.390 1.00 0.00 C ATOM 465 O ALA 58 43.809 26.917 0.869 1.00 0.00 O ATOM 466 N ALA 59 45.292 25.470 1.783 1.00 0.00 N ATOM 467 CA ALA 59 46.457 26.282 1.554 1.00 0.00 C ATOM 468 CB ALA 59 47.683 25.778 2.333 1.00 0.00 C ATOM 469 C ALA 59 46.837 26.309 0.101 1.00 0.00 C ATOM 470 O ALA 59 47.048 27.374 -0.473 1.00 0.00 O ATOM 471 N LYS 60 46.926 25.129 -0.542 1.00 0.00 N ATOM 472 CA LYS 60 47.336 25.102 -1.915 1.00 0.00 C ATOM 473 CB LYS 60 48.836 24.824 -2.062 1.00 0.00 C ATOM 474 CG LYS 60 49.261 23.530 -1.370 1.00 0.00 C ATOM 475 CD LYS 60 50.692 23.121 -1.703 1.00 0.00 C ATOM 476 CE LYS 60 50.901 22.808 -3.183 1.00 0.00 C ATOM 477 NZ LYS 60 52.347 22.793 -3.491 1.00 0.00 N ATOM 478 C LYS 60 46.588 23.997 -2.582 1.00 0.00 C ATOM 479 O LYS 60 46.734 22.830 -2.220 1.00 0.00 O ATOM 480 N THR 61 45.766 24.337 -3.594 1.00 0.00 N ATOM 481 CA THR 61 45.609 25.695 -4.020 1.00 0.00 C ATOM 482 CB THR 61 44.921 25.793 -5.358 1.00 0.00 C ATOM 483 OG1 THR 61 45.651 25.057 -6.329 1.00 0.00 O ATOM 484 CG2 THR 61 44.831 27.265 -5.798 1.00 0.00 C ATOM 485 C THR 61 44.775 26.383 -2.986 1.00 0.00 C ATOM 486 O THR 61 44.173 25.734 -2.131 1.00 0.00 O ATOM 487 N LYS 62 44.748 27.731 -3.021 1.00 0.00 N ATOM 488 CA LYS 62 43.996 28.482 -2.061 1.00 0.00 C ATOM 489 CB LYS 62 44.377 29.972 -2.050 1.00 0.00 C ATOM 490 CG LYS 62 45.854 30.250 -1.755 1.00 0.00 C ATOM 491 CD LYS 62 46.287 31.664 -2.160 1.00 0.00 C ATOM 492 CE LYS 62 47.769 31.963 -1.926 1.00 0.00 C ATOM 493 NZ LYS 62 48.133 33.229 -2.604 1.00 0.00 N ATOM 494 C LYS 62 42.572 28.425 -2.506 1.00 0.00 C ATOM 495 O LYS 62 42.151 29.187 -3.375 1.00 0.00 O ATOM 496 N ALA 63 41.789 27.510 -1.905 1.00 0.00 N ATOM 497 CA ALA 63 40.410 27.380 -2.264 1.00 0.00 C ATOM 498 CB ALA 63 40.126 26.173 -3.174 1.00 0.00 C ATOM 499 C ALA 63 39.649 27.171 -0.995 1.00 0.00 C ATOM 500 O ALA 63 40.192 26.698 0.003 1.00 0.00 O ATOM 501 N THR 64 38.357 27.548 -1.006 1.00 0.00 N ATOM 502 CA THR 64 37.539 27.393 0.160 1.00 0.00 C ATOM 503 CB THR 64 36.779 28.640 0.499 1.00 0.00 C ATOM 504 OG1 THR 64 37.670 29.733 0.661 1.00 0.00 O ATOM 505 CG2 THR 64 36.006 28.403 1.805 1.00 0.00 C ATOM 506 C THR 64 36.520 26.352 -0.174 1.00 0.00 C ATOM 507 O THR 64 35.869 26.432 -1.216 1.00 0.00 O ATOM 508 N ILE 65 36.358 25.339 0.704 1.00 0.00 N ATOM 509 CA ILE 65 35.397 24.308 0.442 1.00 0.00 C ATOM 510 CB ILE 65 35.972 22.915 0.394 1.00 0.00 C ATOM 511 CG2 ILE 65 34.797 21.925 0.357 1.00 0.00 C ATOM 512 CG1 ILE 65 36.969 22.736 -0.766 1.00 0.00 C ATOM 513 CD1 ILE 65 38.368 23.278 -0.479 1.00 0.00 C ATOM 514 C ILE 65 34.382 24.284 1.542 1.00 0.00 C ATOM 515 O ILE 65 34.723 24.365 2.722 1.00 0.00 O ATOM 516 N ASN 66 33.086 24.202 1.171 1.00 0.00 N ATOM 517 CA ASN 66 32.066 24.033 2.165 1.00 0.00 C ATOM 518 CB ASN 66 30.843 24.962 2.009 1.00 0.00 C ATOM 519 CG ASN 66 30.144 24.701 0.685 1.00 0.00 C ATOM 520 OD1 ASN 66 29.286 23.824 0.583 1.00 0.00 O ATOM 521 ND2 ASN 66 30.511 25.496 -0.354 1.00 0.00 N ATOM 522 C ASN 66 31.632 22.608 2.031 1.00 0.00 C ATOM 523 O ASN 66 31.186 22.183 0.966 1.00 0.00 O ATOM 524 N ILE 67 31.769 21.818 3.114 1.00 0.00 N ATOM 525 CA ILE 67 31.474 20.420 3.006 1.00 0.00 C ATOM 526 CB ILE 67 32.639 19.554 3.368 1.00 0.00 C ATOM 527 CG2 ILE 67 32.165 18.092 3.333 1.00 0.00 C ATOM 528 CG1 ILE 67 33.810 19.852 2.411 1.00 0.00 C ATOM 529 CD1 ILE 67 35.161 19.328 2.886 1.00 0.00 C ATOM 530 C ILE 67 30.325 20.096 3.908 1.00 0.00 C ATOM 531 O ILE 67 30.232 20.604 5.024 1.00 0.00 O ATOM 532 N ASP 68 29.377 19.271 3.418 1.00 0.00 N ATOM 533 CA ASP 68 28.251 18.945 4.243 1.00 0.00 C ATOM 534 CB ASP 68 27.041 19.860 3.975 1.00 0.00 C ATOM 535 CG ASP 68 26.029 19.738 5.108 1.00 0.00 C ATOM 536 OD1 ASP 68 26.449 19.573 6.283 1.00 0.00 O ATOM 537 OD2 ASP 68 24.811 19.836 4.810 1.00 0.00 O ATOM 538 C ASP 68 27.819 17.543 3.955 1.00 0.00 C ATOM 539 O ASP 68 28.096 16.992 2.889 1.00 0.00 O ATOM 540 N ALA 69 27.134 16.914 4.930 1.00 0.00 N ATOM 541 CA ALA 69 26.631 15.592 4.699 1.00 0.00 C ATOM 542 CB ALA 69 26.765 14.665 5.918 1.00 0.00 C ATOM 543 C ALA 69 25.173 15.768 4.431 1.00 0.00 C ATOM 544 O ALA 69 24.427 16.221 5.295 1.00 0.00 O ATOM 545 N ILE 70 24.739 15.446 3.197 1.00 0.00 N ATOM 546 CA ILE 70 23.356 15.562 2.854 1.00 0.00 C ATOM 547 CB ILE 70 23.111 15.387 1.383 1.00 0.00 C ATOM 548 CG2 ILE 70 21.590 15.367 1.148 1.00 0.00 C ATOM 549 CG1 ILE 70 23.835 16.504 0.607 1.00 0.00 C ATOM 550 CD1 ILE 70 23.912 16.276 -0.903 1.00 0.00 C ATOM 551 C ILE 70 22.616 14.520 3.625 1.00 0.00 C ATOM 552 O ILE 70 21.540 14.769 4.166 1.00 0.00 O ATOM 553 N SER 71 23.202 13.310 3.682 1.00 0.00 N ATOM 554 CA SER 71 22.664 12.201 4.406 1.00 0.00 C ATOM 555 CB SER 71 21.929 11.180 3.522 1.00 0.00 C ATOM 556 OG SER 71 20.812 11.778 2.884 1.00 0.00 O ATOM 557 C SER 71 23.854 11.468 4.926 1.00 0.00 C ATOM 558 O SER 71 24.993 11.887 4.731 1.00 0.00 O ATOM 559 N GLY 72 23.614 10.344 5.619 1.00 0.00 N ATOM 560 CA GLY 72 24.711 9.560 6.096 1.00 0.00 C ATOM 561 C GLY 72 25.449 9.084 4.885 1.00 0.00 C ATOM 562 O GLY 72 26.666 8.915 4.899 1.00 0.00 O ATOM 563 N PHE 73 24.683 8.799 3.819 1.00 0.00 N ATOM 564 CA PHE 73 25.149 8.273 2.569 1.00 0.00 C ATOM 565 CB PHE 73 23.987 7.838 1.663 1.00 0.00 C ATOM 566 CG PHE 73 23.180 6.855 2.428 1.00 0.00 C ATOM 567 CD1 PHE 73 23.526 5.525 2.467 1.00 0.00 C ATOM 568 CD2 PHE 73 22.064 7.279 3.112 1.00 0.00 C ATOM 569 CE1 PHE 73 22.765 4.633 3.182 1.00 0.00 C ATOM 570 CE2 PHE 73 21.301 6.391 3.827 1.00 0.00 C ATOM 571 CZ PHE 73 21.652 5.063 3.863 1.00 0.00 C ATOM 572 C PHE 73 25.940 9.238 1.741 1.00 0.00 C ATOM 573 O PHE 73 26.912 8.829 1.109 1.00 0.00 O ATOM 574 N ALA 74 25.547 10.529 1.680 1.00 0.00 N ATOM 575 CA ALA 74 26.176 11.368 0.694 1.00 0.00 C ATOM 576 CB ALA 74 25.167 12.038 -0.258 1.00 0.00 C ATOM 577 C ALA 74 26.997 12.460 1.295 1.00 0.00 C ATOM 578 O ALA 74 26.653 13.058 2.313 1.00 0.00 O ATOM 579 N TYR 75 28.130 12.755 0.629 1.00 0.00 N ATOM 580 CA TYR 75 29.013 13.790 1.081 1.00 0.00 C ATOM 581 CB TYR 75 30.465 13.307 1.249 1.00 0.00 C ATOM 582 CG TYR 75 30.457 12.186 2.230 1.00 0.00 C ATOM 583 CD1 TYR 75 30.473 12.428 3.584 1.00 0.00 C ATOM 584 CD2 TYR 75 30.442 10.883 1.788 1.00 0.00 C ATOM 585 CE1 TYR 75 30.462 11.388 4.484 1.00 0.00 C ATOM 586 CE2 TYR 75 30.433 9.840 2.682 1.00 0.00 C ATOM 587 CZ TYR 75 30.443 10.092 4.031 1.00 0.00 C ATOM 588 OH TYR 75 30.432 9.022 4.951 1.00 0.00 O ATOM 589 C TYR 75 29.030 14.805 -0.019 1.00 0.00 C ATOM 590 O TYR 75 29.308 14.471 -1.169 1.00 0.00 O ATOM 591 N GLU 76 28.758 16.086 0.303 1.00 0.00 N ATOM 592 CA GLU 76 28.764 17.090 -0.719 1.00 0.00 C ATOM 593 CB GLU 76 27.503 17.968 -0.717 1.00 0.00 C ATOM 594 CG GLU 76 27.514 19.041 -1.805 1.00 0.00 C ATOM 595 CD GLU 76 26.260 19.885 -1.630 1.00 0.00 C ATOM 596 OE1 GLU 76 25.384 19.482 -0.820 1.00 0.00 O ATOM 597 OE2 GLU 76 26.165 20.944 -2.304 1.00 0.00 O ATOM 598 C GLU 76 29.909 18.012 -0.473 1.00 0.00 C ATOM 599 O GLU 76 30.157 18.434 0.655 1.00 0.00 O ATOM 600 N TYR 77 30.631 18.365 -1.554 1.00 0.00 N ATOM 601 CA TYR 77 31.769 19.225 -1.440 1.00 0.00 C ATOM 602 CB TYR 77 33.056 18.583 -1.912 1.00 0.00 C ATOM 603 CG TYR 77 32.810 18.123 -3.305 1.00 0.00 C ATOM 604 CD1 TYR 77 32.181 16.921 -3.525 1.00 0.00 C ATOM 605 CD2 TYR 77 33.198 18.886 -4.382 1.00 0.00 C ATOM 606 CE1 TYR 77 31.942 16.480 -4.802 1.00 0.00 C ATOM 607 CE2 TYR 77 32.961 18.449 -5.664 1.00 0.00 C ATOM 608 CZ TYR 77 32.335 17.243 -5.873 1.00 0.00 C ATOM 609 OH TYR 77 32.085 16.776 -7.178 1.00 0.00 O ATOM 610 C TYR 77 31.586 20.368 -2.373 1.00 0.00 C ATOM 611 O TYR 77 30.821 20.290 -3.331 1.00 0.00 O ATOM 612 N THR 78 32.276 21.484 -2.078 1.00 0.00 N ATOM 613 CA THR 78 32.218 22.627 -2.934 1.00 0.00 C ATOM 614 CB THR 78 31.214 23.636 -2.458 1.00 0.00 C ATOM 615 OG1 THR 78 29.926 23.046 -2.395 1.00 0.00 O ATOM 616 CG2 THR 78 31.199 24.828 -3.424 1.00 0.00 C ATOM 617 C THR 78 33.571 23.265 -2.908 1.00 0.00 C ATOM 618 O THR 78 34.162 23.438 -1.844 1.00 0.00 O ATOM 619 N LEU 79 34.108 23.628 -4.089 1.00 0.00 N ATOM 620 CA LEU 79 35.388 24.270 -4.120 1.00 0.00 C ATOM 621 CB LEU 79 36.413 23.438 -4.915 1.00 0.00 C ATOM 622 CG LEU 79 37.870 23.917 -4.817 1.00 0.00 C ATOM 623 CD1 LEU 79 38.052 25.323 -5.382 1.00 0.00 C ATOM 624 CD2 LEU 79 38.388 23.801 -3.384 1.00 0.00 C ATOM 625 C LEU 79 35.166 25.563 -4.843 1.00 0.00 C ATOM 626 O LEU 79 34.547 25.585 -5.906 1.00 0.00 O ATOM 627 N GLU 80 35.658 26.681 -4.276 1.00 0.00 N ATOM 628 CA GLU 80 35.458 27.961 -4.896 1.00 0.00 C ATOM 629 CB GLU 80 34.752 28.961 -3.963 1.00 0.00 C ATOM 630 CG GLU 80 34.519 30.340 -4.579 1.00 0.00 C ATOM 631 CD GLU 80 33.804 31.196 -3.545 1.00 0.00 C ATOM 632 OE1 GLU 80 33.361 30.630 -2.509 1.00 0.00 O ATOM 633 OE2 GLU 80 33.692 32.429 -3.777 1.00 0.00 O ATOM 634 C GLU 80 36.802 28.530 -5.231 1.00 0.00 C ATOM 635 O GLU 80 37.673 28.641 -4.367 1.00 0.00 O ATOM 636 N ILE 81 37.001 28.875 -6.521 1.00 0.00 N ATOM 637 CA ILE 81 38.229 29.478 -6.960 1.00 0.00 C ATOM 638 CB ILE 81 39.112 28.517 -7.705 1.00 0.00 C ATOM 639 CG2 ILE 81 39.596 27.442 -6.722 1.00 0.00 C ATOM 640 CG1 ILE 81 38.382 27.955 -8.937 1.00 0.00 C ATOM 641 CD1 ILE 81 39.275 27.113 -9.844 1.00 0.00 C ATOM 642 C ILE 81 37.897 30.611 -7.886 1.00 0.00 C ATOM 643 O ILE 81 37.095 30.460 -8.806 1.00 0.00 O ATOM 644 N ASN 82 38.527 31.782 -7.663 1.00 0.00 N ATOM 645 CA ASN 82 38.367 32.938 -8.505 1.00 0.00 C ATOM 646 CB ASN 82 38.885 32.715 -9.937 1.00 0.00 C ATOM 647 CG ASN 82 40.393 32.519 -9.879 1.00 0.00 C ATOM 648 OD1 ASN 82 41.042 32.828 -8.881 1.00 0.00 O ATOM 649 ND2 ASN 82 40.970 31.990 -10.990 1.00 0.00 N ATOM 650 C ASN 82 36.931 33.361 -8.594 1.00 0.00 C ATOM 651 O ASN 82 36.494 33.852 -9.634 1.00 0.00 O ATOM 652 N GLY 83 36.153 33.193 -7.509 1.00 0.00 N ATOM 653 CA GLY 83 34.805 33.694 -7.505 1.00 0.00 C ATOM 654 C GLY 83 33.916 32.786 -8.291 1.00 0.00 C ATOM 655 O GLY 83 32.771 33.136 -8.573 1.00 0.00 O ATOM 656 N LYS 84 34.417 31.597 -8.672 1.00 0.00 N ATOM 657 CA LYS 84 33.611 30.687 -9.432 1.00 0.00 C ATOM 658 CB LYS 84 34.130 30.486 -10.863 1.00 0.00 C ATOM 659 CG LYS 84 34.048 31.756 -11.711 1.00 0.00 C ATOM 660 CD LYS 84 34.920 31.711 -12.964 1.00 0.00 C ATOM 661 CE LYS 84 36.401 31.988 -12.691 1.00 0.00 C ATOM 662 NZ LYS 84 37.165 31.917 -13.955 1.00 0.00 N ATOM 663 C LYS 84 33.659 29.364 -8.735 1.00 0.00 C ATOM 664 O LYS 84 34.547 29.115 -7.923 1.00 0.00 O ATOM 665 N SER 85 32.670 28.491 -9.017 1.00 0.00 N ATOM 666 CA SER 85 32.617 27.207 -8.381 1.00 0.00 C ATOM 667 CB SER 85 31.204 26.607 -8.344 1.00 0.00 C ATOM 668 OG SER 85 30.338 27.456 -7.604 1.00 0.00 O ATOM 669 C SER 85 33.500 26.260 -9.131 1.00 0.00 C ATOM 670 O SER 85 33.879 26.494 -10.274 1.00 0.00 O ATOM 671 N LEU 86 33.923 25.204 -8.419 1.00 0.00 N ATOM 672 CA LEU 86 34.764 24.132 -8.854 1.00 0.00 C ATOM 673 CB LEU 86 35.579 23.472 -7.745 1.00 0.00 C ATOM 674 CG LEU 86 36.743 22.706 -8.382 1.00 0.00 C ATOM 675 CD1 LEU 86 37.927 23.643 -8.672 1.00 0.00 C ATOM 676 CD2 LEU 86 37.088 21.433 -7.620 1.00 0.00 C ATOM 677 C LEU 86 33.989 23.026 -9.519 1.00 0.00 C ATOM 678 O LEU 86 34.576 22.023 -9.913 1.00 0.00 O ATOM 679 N LYS 87 32.651 23.100 -9.566 1.00 0.00 N ATOM 680 CA LYS 87 31.830 21.978 -9.949 1.00 0.00 C ATOM 681 CB LYS 87 30.349 22.376 -10.047 1.00 0.00 C ATOM 682 CG LYS 87 29.853 23.018 -8.752 1.00 0.00 C ATOM 683 CD LYS 87 30.035 22.126 -7.522 1.00 0.00 C ATOM 684 CE LYS 87 29.899 22.884 -6.200 1.00 0.00 C ATOM 685 NZ LYS 87 28.644 23.668 -6.187 1.00 0.00 N ATOM 686 C LYS 87 32.236 21.356 -11.259 1.00 0.00 C ATOM 687 O LYS 87 32.244 20.131 -11.372 1.00 0.00 O ATOM 688 N LYS 88 32.583 22.148 -12.286 1.00 0.00 N ATOM 689 CA LYS 88 32.966 21.562 -13.545 1.00 0.00 C ATOM 690 CB LYS 88 33.344 22.622 -14.589 1.00 0.00 C ATOM 691 CG LYS 88 34.619 23.383 -14.226 1.00 0.00 C ATOM 692 CD LYS 88 35.122 24.293 -15.347 1.00 0.00 C ATOM 693 CE LYS 88 34.254 25.537 -15.550 1.00 0.00 C ATOM 694 NZ LYS 88 34.884 26.433 -16.544 1.00 0.00 N ATOM 695 C LYS 88 34.183 20.733 -13.289 1.00 0.00 C ATOM 696 O LYS 88 34.452 19.707 -13.894 1.00 0.00 O ATOM 697 N TYR 89 35.000 21.164 -12.351 1.00 0.00 N ATOM 698 CA TYR 89 36.227 20.507 -12.055 1.00 0.00 C ATOM 699 CB TYR 89 36.968 21.353 -11.053 1.00 0.00 C ATOM 700 CG TYR 89 37.333 22.569 -11.827 1.00 0.00 C ATOM 701 CD1 TYR 89 38.307 22.516 -12.798 1.00 0.00 C ATOM 702 CD2 TYR 89 36.700 23.766 -11.586 1.00 0.00 C ATOM 703 CE1 TYR 89 38.646 23.636 -13.521 1.00 0.00 C ATOM 704 CE2 TYR 89 37.034 24.889 -12.303 1.00 0.00 C ATOM 705 CZ TYR 89 38.007 24.825 -13.270 1.00 0.00 C ATOM 706 OH TYR 89 38.352 25.977 -14.008 1.00 0.00 O ATOM 707 C TYR 89 36.034 19.125 -11.504 1.00 0.00 C ATOM 708 O TYR 89 36.899 18.270 -11.694 1.00 0.00 O ATOM 709 N MET 90 34.945 18.890 -10.745 1.00 0.00 N ATOM 710 CA MET 90 34.694 17.610 -10.139 1.00 0.00 C ATOM 711 CB MET 90 33.260 17.461 -9.602 1.00 0.00 C ATOM 712 CG MET 90 32.182 17.435 -10.688 1.00 0.00 C ATOM 713 SD MET 90 30.546 16.885 -10.124 1.00 0.00 S ATOM 714 CE MET 90 31.019 15.137 -9.985 1.00 0.00 C ATOM 715 C MET 90 34.932 16.473 -11.136 1.00 0.00 C ATOM 716 O MET 90 34.240 16.424 -12.188 1.00 0.00 O ATOM 717 OXT MET 90 35.829 15.639 -10.853 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 65.31 61.2 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 52.15 68.6 118 100.0 118 ARMSMC SURFACE . . . . . . . . 77.25 51.9 108 100.0 108 ARMSMC BURIED . . . . . . . . 40.49 75.7 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.21 44.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 87.62 45.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 88.02 44.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 88.65 43.2 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 87.59 45.2 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.64 54.5 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 69.70 60.9 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 83.41 51.3 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 75.13 57.6 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 83.63 50.0 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.12 37.5 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 81.12 37.5 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 69.67 47.1 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 78.77 44.4 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 87.79 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.13 53.8 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 81.13 53.8 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 86.57 50.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 88.16 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 5.95 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.33 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.33 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0814 CRMSCA SECONDARY STRUCTURE . . 5.84 59 100.0 59 CRMSCA SURFACE . . . . . . . . 8.18 55 100.0 55 CRMSCA BURIED . . . . . . . . 5.74 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.38 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 5.89 293 100.0 293 CRMSMC SURFACE . . . . . . . . 8.22 269 100.0 269 CRMSMC BURIED . . . . . . . . 5.84 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.64 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 9.71 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 8.31 252 100.0 252 CRMSSC SURFACE . . . . . . . . 10.43 204 100.0 204 CRMSSC BURIED . . . . . . . . 8.47 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.53 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 7.21 488 100.0 488 CRMSALL SURFACE . . . . . . . . 9.28 424 100.0 424 CRMSALL BURIED . . . . . . . . 7.31 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.339 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 5.078 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 7.186 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 5.009 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.388 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 5.122 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 7.224 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 5.089 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.326 1.000 0.500 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 8.386 1.000 0.500 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 7.173 1.000 0.500 252 100.0 252 ERRSC SURFACE . . . . . . . . 9.058 1.000 0.500 204 100.0 204 ERRSC BURIED . . . . . . . . 7.343 1.000 0.500 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.326 1.000 0.500 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 6.159 1.000 0.500 488 100.0 488 ERRALL SURFACE . . . . . . . . 8.061 1.000 0.500 424 100.0 424 ERRALL BURIED . . . . . . . . 6.258 1.000 0.500 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 6 18 41 73 90 90 DISTCA CA (P) 2.22 6.67 20.00 45.56 81.11 90 DISTCA CA (RMS) 0.84 1.28 2.20 3.43 5.48 DISTCA ALL (N) 12 36 111 270 520 716 716 DISTALL ALL (P) 1.68 5.03 15.50 37.71 72.63 716 DISTALL ALL (RMS) 0.86 1.30 2.26 3.41 5.60 DISTALL END of the results output