####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 622), selected 90 , name T0540TS042_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS042_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 65 2 - 66 4.95 10.58 LONGEST_CONTINUOUS_SEGMENT: 65 3 - 67 4.96 10.58 LCS_AVERAGE: 63.38 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 2.00 11.60 LCS_AVERAGE: 18.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 73 - 87 0.99 20.72 LONGEST_CONTINUOUS_SEGMENT: 15 74 - 88 0.99 19.26 LCS_AVERAGE: 11.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 6 45 3 3 3 4 5 6 6 6 6 13 16 20 21 21 42 50 51 57 61 63 LCS_GDT T 2 T 2 3 19 65 3 3 5 5 9 15 29 32 34 36 46 52 55 60 62 64 66 67 68 72 LCS_GDT D 3 D 3 4 22 65 3 5 15 20 27 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT L 4 L 4 4 22 65 3 4 7 17 23 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 5 V 5 10 22 65 3 9 13 19 23 29 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT A 6 A 6 10 22 65 5 13 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 7 V 7 10 22 65 3 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT W 8 W 8 13 22 65 5 14 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT D 9 D 9 13 22 65 3 10 15 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 10 V 10 13 22 65 5 6 12 17 23 31 35 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT A 11 A 11 13 22 65 4 10 15 20 26 31 35 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT L 12 L 12 13 22 65 5 10 20 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT S 13 S 13 13 22 65 5 14 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT D 14 D 14 13 22 65 7 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT G 15 G 15 13 22 65 5 14 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 16 V 16 13 22 65 4 10 20 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT H 17 H 17 13 22 65 5 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT K 18 K 18 13 22 65 9 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT I 19 I 19 13 22 65 5 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT E 20 E 20 13 22 65 4 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT F 21 F 21 12 22 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT E 22 E 22 12 22 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT H 23 H 23 12 22 65 4 11 20 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT G 24 G 24 8 22 65 4 7 9 14 23 31 33 38 43 48 49 55 57 59 62 64 66 67 68 72 LCS_GDT T 25 T 25 8 19 65 4 7 9 11 16 19 26 33 40 42 48 49 52 56 57 59 63 64 66 68 LCS_GDT T 26 T 26 8 15 65 5 7 9 11 16 19 25 34 40 42 48 49 52 56 57 59 61 63 66 67 LCS_GDT S 27 S 27 8 16 65 5 7 9 14 20 31 33 38 43 48 49 55 55 59 62 64 64 67 68 68 LCS_GDT G 28 G 28 8 16 65 5 7 13 24 30 32 36 40 45 48 50 55 57 59 62 64 66 67 68 72 LCS_GDT K 29 K 29 13 16 65 5 9 18 22 27 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT R 30 R 30 13 16 65 10 14 19 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 31 V 31 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 32 V 32 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT Y 33 Y 33 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 34 V 34 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT D 35 D 35 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT G 36 G 36 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT K 37 K 37 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT E 38 E 38 13 16 65 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT E 39 E 39 13 16 65 6 13 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT I 40 I 40 13 16 65 6 14 20 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT R 41 R 41 13 16 65 6 8 18 21 27 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT K 42 K 42 11 16 65 6 7 10 18 21 27 32 38 43 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT E 43 E 43 9 14 65 3 4 9 12 16 21 24 26 33 40 47 53 57 60 62 64 66 67 68 72 LCS_GDT W 44 W 44 9 14 65 3 4 9 12 13 15 21 26 29 31 34 37 41 57 61 64 66 67 68 72 LCS_GDT M 45 M 45 4 14 65 3 3 4 4 16 21 24 26 29 35 47 51 57 60 62 64 66 67 68 72 LCS_GDT F 46 F 46 4 14 65 3 3 9 12 13 16 21 26 29 31 34 37 43 47 57 63 66 67 68 72 LCS_GDT K 47 K 47 4 4 65 3 3 4 5 5 9 15 25 32 37 45 53 57 60 62 64 66 67 68 72 LCS_GDT L 48 L 48 4 5 65 3 10 18 21 27 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 49 V 49 3 10 65 3 3 15 19 25 31 35 40 44 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT G 50 G 50 6 10 65 3 5 6 11 16 22 27 31 38 43 47 55 57 60 62 64 66 67 68 72 LCS_GDT K 51 K 51 6 10 65 4 5 7 8 16 22 27 33 38 43 49 55 57 60 62 64 66 67 68 72 LCS_GDT E 52 E 52 6 10 65 4 5 7 8 15 19 24 28 35 40 44 50 57 60 62 64 66 67 68 72 LCS_GDT T 53 T 53 6 10 65 4 5 11 14 18 22 27 33 38 43 47 55 57 60 62 64 66 67 68 72 LCS_GDT F 54 F 54 6 10 65 4 5 11 14 18 22 27 33 38 43 47 55 57 60 62 64 66 67 68 72 LCS_GDT Y 55 Y 55 6 10 65 4 5 7 8 18 29 32 40 44 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT V 56 V 56 6 10 65 4 5 7 10 21 29 35 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT G 57 G 57 6 10 65 4 5 6 7 10 13 17 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT A 58 A 58 3 10 65 3 4 7 8 21 26 34 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT A 59 A 59 3 10 65 3 5 9 23 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT K 60 K 60 7 12 65 3 4 8 8 13 21 27 39 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT T 61 T 61 7 12 65 3 6 8 8 15 21 34 39 45 47 50 53 57 60 62 64 66 67 68 72 LCS_GDT K 62 K 62 7 12 65 3 6 14 19 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT A 63 A 63 7 12 65 4 6 8 8 25 27 34 39 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT T 64 T 64 7 12 65 3 6 14 21 27 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT I 65 I 65 7 12 65 3 6 8 8 15 22 29 36 42 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT N 66 N 66 7 12 65 4 6 8 14 21 25 31 38 43 48 50 55 57 60 62 64 66 67 68 72 LCS_GDT I 67 I 67 6 12 65 4 5 8 12 16 21 24 27 32 40 47 53 57 60 62 64 66 67 68 72 LCS_GDT D 68 D 68 6 12 43 4 5 7 12 16 21 24 27 32 40 47 53 57 60 62 64 66 67 68 72 LCS_GDT A 69 A 69 5 12 43 4 5 7 12 12 14 21 25 26 28 34 41 50 57 61 63 66 67 68 72 LCS_GDT I 70 I 70 5 12 43 3 4 7 12 15 21 23 27 32 40 47 53 57 60 62 64 66 67 68 72 LCS_GDT S 71 S 71 4 18 43 3 3 7 9 11 15 18 22 24 29 32 36 42 47 57 62 65 67 68 72 LCS_GDT G 72 G 72 4 19 33 3 3 5 6 13 18 19 19 22 27 30 31 31 34 41 45 49 56 63 68 LCS_GDT F 73 F 73 15 19 33 3 6 15 16 17 18 19 19 22 27 30 31 31 34 36 44 47 51 55 62 LCS_GDT A 74 A 74 15 19 33 6 11 15 16 17 18 19 19 24 27 30 31 31 35 40 45 49 55 62 71 LCS_GDT Y 75 Y 75 15 19 33 6 11 15 16 17 18 19 19 24 27 30 31 33 36 41 46 50 57 64 72 LCS_GDT E 76 E 76 15 19 33 5 11 15 16 17 18 19 19 24 27 30 31 32 41 46 50 57 61 66 72 LCS_GDT Y 77 Y 77 15 19 33 5 11 15 16 17 18 19 19 24 27 30 31 32 36 44 49 52 61 66 72 LCS_GDT T 78 T 78 15 19 33 6 11 15 16 17 18 19 19 24 27 30 31 35 41 46 50 57 61 66 72 LCS_GDT L 79 L 79 15 19 33 6 11 15 16 17 18 19 19 24 27 30 31 35 41 46 49 53 61 66 72 LCS_GDT E 80 E 80 15 19 33 6 11 15 16 17 18 19 19 24 27 30 34 36 43 46 50 56 61 66 72 LCS_GDT I 81 I 81 15 19 33 3 10 15 16 17 18 19 19 24 27 30 31 31 35 40 48 52 57 64 72 LCS_GDT N 82 N 82 15 19 33 3 11 15 16 17 18 19 19 24 27 30 31 31 35 40 44 49 57 62 71 LCS_GDT G 83 G 83 15 19 33 3 11 15 16 17 18 19 19 24 27 30 31 31 34 40 44 53 56 62 70 LCS_GDT K 84 K 84 15 19 33 5 11 15 16 17 18 19 19 24 27 30 31 31 34 40 44 49 55 59 66 LCS_GDT S 85 S 85 15 19 33 3 10 15 16 17 18 19 19 24 27 30 31 36 40 42 48 52 56 61 70 LCS_GDT L 86 L 86 15 19 33 3 11 15 16 17 18 19 19 24 27 30 31 31 34 42 48 49 56 59 64 LCS_GDT K 87 K 87 15 19 33 6 11 15 16 17 18 19 19 24 27 30 31 35 41 44 48 52 56 62 71 LCS_GDT K 88 K 88 15 19 33 3 6 12 16 17 18 19 19 22 27 30 31 31 33 40 44 48 53 58 63 LCS_GDT Y 89 Y 89 6 19 33 3 6 9 16 17 18 19 19 21 27 30 31 31 33 36 40 45 51 55 62 LCS_GDT M 90 M 90 6 19 33 3 6 9 12 14 18 19 19 21 26 28 31 31 33 36 39 42 49 53 57 LCS_AVERAGE LCS_A: 30.91 ( 11.00 18.33 63.38 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 16 21 24 30 32 36 40 45 48 50 55 57 60 62 64 66 67 68 72 GDT PERCENT_AT 11.11 17.78 23.33 26.67 33.33 35.56 40.00 44.44 50.00 53.33 55.56 61.11 63.33 66.67 68.89 71.11 73.33 74.44 75.56 80.00 GDT RMS_LOCAL 0.33 0.64 0.91 1.13 1.50 1.66 2.05 2.30 2.67 2.98 3.07 3.62 4.08 4.31 4.42 4.59 4.90 4.99 5.20 6.09 GDT RMS_ALL_AT 10.12 10.47 10.63 10.75 10.58 10.63 10.32 10.42 10.37 10.17 10.16 10.64 10.10 10.08 10.08 10.17 10.07 10.11 9.95 9.24 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 11.849 3 0.364 0.385 12.847 1.071 0.536 LGA T 2 T 2 6.175 2 0.668 0.619 8.475 27.262 17.483 LGA D 3 D 3 3.464 3 0.523 0.531 5.451 39.167 22.857 LGA L 4 L 4 3.266 3 0.052 0.054 5.111 61.190 33.869 LGA V 5 V 5 3.734 2 0.635 0.569 6.641 50.119 30.544 LGA A 6 A 6 1.766 0 0.056 0.077 2.217 75.119 73.048 LGA V 7 V 7 1.398 2 0.079 0.072 1.972 83.690 58.231 LGA W 8 W 8 1.407 9 0.080 0.111 2.468 83.690 28.537 LGA D 9 D 9 2.570 3 0.052 0.076 4.473 52.262 32.381 LGA V 10 V 10 3.927 2 0.255 0.339 4.275 48.333 32.925 LGA A 11 A 11 3.795 0 0.104 0.095 5.041 43.452 40.000 LGA L 12 L 12 2.173 3 0.066 0.089 2.366 68.810 43.512 LGA S 13 S 13 1.108 1 0.060 0.063 1.714 81.548 67.937 LGA D 14 D 14 1.008 3 0.365 0.371 2.774 77.619 47.917 LGA G 15 G 15 1.335 0 0.055 0.055 1.373 83.690 83.690 LGA V 16 V 16 2.081 2 0.203 0.268 3.042 64.881 44.218 LGA H 17 H 17 0.622 5 0.080 0.077 1.390 88.214 43.429 LGA K 18 K 18 0.951 4 0.041 0.039 1.729 83.810 46.296 LGA I 19 I 19 1.731 3 0.084 0.131 1.877 77.143 47.679 LGA E 20 E 20 1.171 4 0.181 0.204 1.803 79.286 44.286 LGA F 21 F 21 0.373 6 0.064 0.066 0.548 97.619 44.589 LGA E 22 E 22 0.325 4 0.113 0.184 1.237 95.238 51.376 LGA H 23 H 23 2.352 5 0.072 0.098 4.904 55.238 26.429 LGA G 24 G 24 5.796 0 0.050 0.050 6.368 24.286 24.286 LGA T 25 T 25 8.969 2 0.043 0.042 11.014 2.381 1.361 LGA T 26 T 26 9.561 2 0.066 0.070 11.205 4.762 2.721 LGA S 27 S 27 5.619 1 0.087 0.099 6.952 35.714 26.667 LGA G 28 G 28 2.949 0 0.089 0.089 4.097 66.786 66.786 LGA K 29 K 29 3.111 4 0.069 0.108 5.179 59.167 29.206 LGA R 30 R 30 1.774 6 0.022 0.049 2.401 68.810 30.909 LGA V 31 V 31 0.975 2 0.049 0.058 1.113 88.214 63.333 LGA V 32 V 32 0.894 2 0.035 0.045 1.139 90.476 63.333 LGA Y 33 Y 33 0.678 7 0.076 0.077 1.219 88.214 36.944 LGA V 34 V 34 0.972 2 0.063 0.062 1.121 85.952 60.748 LGA D 35 D 35 1.239 3 0.009 0.030 1.579 81.429 49.821 LGA G 36 G 36 0.952 0 0.063 0.063 1.123 88.214 88.214 LGA K 37 K 37 1.041 4 0.027 0.048 1.343 88.214 48.254 LGA E 38 E 38 0.743 4 0.137 0.205 1.558 86.071 47.302 LGA E 39 E 39 1.338 4 0.103 0.099 2.550 83.690 43.545 LGA I 40 I 40 2.090 3 0.058 0.061 3.101 68.929 40.714 LGA R 41 R 41 3.666 6 0.057 0.054 4.480 43.690 19.827 LGA K 42 K 42 6.268 4 0.175 0.252 7.605 15.119 8.201 LGA E 43 E 43 10.710 4 0.650 0.604 13.208 0.357 0.159 LGA W 44 W 44 13.613 9 0.091 0.128 16.123 0.000 0.000 LGA M 45 M 45 12.614 3 0.656 0.622 13.503 0.000 0.000 LGA F 46 F 46 15.083 6 0.016 0.038 16.904 0.000 0.000 LGA K 47 K 47 10.165 4 0.646 0.601 11.597 3.571 1.640 LGA L 48 L 48 4.139 3 0.123 0.121 6.148 32.262 20.774 LGA V 49 V 49 5.060 2 0.652 0.615 9.625 17.024 14.218 LGA G 50 G 50 9.319 0 0.671 0.671 9.319 4.405 4.405 LGA K 51 K 51 8.771 4 0.088 0.128 9.207 2.143 1.481 LGA E 52 E 52 9.805 4 0.074 0.108 10.582 2.976 1.323 LGA T 53 T 53 8.120 2 0.021 0.026 9.306 3.095 2.449 LGA F 54 F 54 7.937 6 0.158 0.214 8.808 12.262 4.719 LGA Y 55 Y 55 5.357 7 0.032 0.035 6.159 25.238 10.198 LGA V 56 V 56 4.291 2 0.018 0.021 4.555 35.714 24.898 LGA G 57 G 57 4.853 0 0.222 0.222 4.853 37.262 37.262 LGA A 58 A 58 4.969 0 0.599 0.544 6.533 31.786 28.095 LGA A 59 A 59 2.334 0 0.616 0.616 3.471 59.167 57.333 LGA K 60 K 60 4.993 4 0.346 0.327 5.339 32.857 17.513 LGA T 61 T 61 5.195 2 0.090 0.137 6.656 31.667 20.000 LGA K 62 K 62 2.595 4 0.038 0.076 4.645 47.143 26.508 LGA A 63 A 63 4.435 0 0.121 0.116 6.444 41.905 36.952 LGA T 64 T 64 3.373 2 0.044 0.045 5.265 37.738 30.816 LGA I 65 I 65 6.619 3 0.034 0.048 8.056 18.452 9.821 LGA N 66 N 66 6.764 3 0.166 0.182 8.959 8.571 6.964 LGA I 67 I 67 10.778 3 0.038 0.039 11.827 0.357 0.179 LGA D 68 D 68 12.151 3 0.085 0.101 14.295 0.000 0.000 LGA A 69 A 69 15.808 0 0.582 0.556 17.231 0.000 0.000 LGA I 70 I 70 13.380 3 0.633 0.618 16.806 0.000 0.000 LGA S 71 S 71 18.704 1 0.202 0.251 20.215 0.000 0.000 LGA G 72 G 72 23.123 0 0.644 0.644 23.123 0.000 0.000 LGA F 73 F 73 23.996 6 0.422 0.412 25.874 0.000 0.000 LGA A 74 A 74 20.927 0 0.142 0.174 21.422 0.000 0.000 LGA Y 75 Y 75 17.942 7 0.011 0.015 19.356 0.000 0.000 LGA E 76 E 76 15.740 4 0.150 0.197 15.997 0.000 0.000 LGA Y 77 Y 77 15.349 7 0.066 0.107 16.793 0.000 0.000 LGA T 78 T 78 13.788 2 0.037 0.054 13.790 0.000 0.000 LGA L 79 L 79 14.352 3 0.022 0.021 15.541 0.000 0.000 LGA E 80 E 80 13.400 4 0.065 0.097 13.722 0.000 0.000 LGA I 81 I 81 14.957 3 0.080 0.083 16.886 0.000 0.000 LGA N 82 N 82 16.395 3 0.068 0.064 18.438 0.000 0.000 LGA G 83 G 83 16.034 0 0.103 0.103 16.446 0.000 0.000 LGA K 84 K 84 17.582 4 0.128 0.150 18.851 0.000 0.000 LGA S 85 S 85 15.813 1 0.175 0.237 17.813 0.000 0.000 LGA L 86 L 86 18.425 3 0.029 0.029 19.863 0.000 0.000 LGA K 87 K 87 17.772 4 0.023 0.021 20.804 0.000 0.000 LGA K 88 K 88 20.571 4 0.131 0.144 20.869 0.000 0.000 LGA Y 89 Y 89 23.705 7 0.067 0.061 25.803 0.000 0.000 LGA M 90 M 90 27.381 3 0.458 0.474 30.403 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 442 61.73 90 SUMMARY(RMSD_GDC): 8.571 8.566 8.637 35.272 23.018 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 40 2.30 40.000 36.089 1.665 LGA_LOCAL RMSD: 2.302 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.424 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 8.571 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.485065 * X + 0.569863 * Y + -0.663301 * Z + 30.982252 Y_new = 0.274196 * X + -0.621146 * Y + -0.734162 * Z + 6.897241 Z_new = -0.830378 * X + -0.537991 * Y + 0.145042 * Z + 16.250830 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.627096 0.979787 -1.307458 [DEG: 150.5215 56.1376 -74.9118 ] ZXZ: -0.734735 1.425241 -2.145684 [DEG: -42.0972 81.6603 -122.9387 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS042_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS042_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 40 2.30 36.089 8.57 REMARK ---------------------------------------------------------- MOLECULE T0540TS042_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 30.982 6.897 16.251 1.00 0.00 N ATOM 2 CA MET 1 30.275 7.297 15.040 1.00 0.00 C ATOM 3 C MET 1 30.817 6.566 13.819 1.00 0.00 C ATOM 4 O MET 1 32.008 6.263 13.742 1.00 0.00 O ATOM 5 CB MET 1 30.381 8.808 14.841 1.00 0.00 C ATOM 6 CEN MET 1 29.444 10.290 14.899 1.00 0.00 C ATOM 7 H MET 1 31.476 7.580 16.790 1.00 0.00 H ATOM 8 N THR 2 29.936 6.284 12.865 1.00 0.00 N ATOM 9 CA THR 2 30.348 5.729 11.581 1.00 0.00 C ATOM 10 C THR 2 31.200 6.720 10.799 1.00 0.00 C ATOM 11 O THR 2 31.006 7.932 10.897 1.00 0.00 O ATOM 12 CB THR 2 29.134 5.322 10.725 1.00 0.00 C ATOM 13 CEN THR 2 28.647 5.011 10.639 1.00 0.00 C ATOM 14 H THR 2 28.956 6.460 13.033 1.00 0.00 H ATOM 15 N ASP 3 32.143 6.199 10.022 1.00 0.00 N ATOM 16 CA ASP 3 33.024 7.038 9.219 1.00 0.00 C ATOM 17 C ASP 3 32.228 7.920 8.265 1.00 0.00 C ATOM 18 O ASP 3 31.241 7.479 7.675 1.00 0.00 O ATOM 19 CB ASP 3 34.016 6.177 8.434 1.00 0.00 C ATOM 20 CEN ASP 3 34.976 5.839 8.488 1.00 0.00 C ATOM 21 H ASP 3 32.253 5.196 9.986 1.00 0.00 H ATOM 22 N LEU 4 32.661 9.167 8.120 1.00 0.00 N ATOM 23 CA LEU 4 32.012 10.102 7.208 1.00 0.00 C ATOM 24 C LEU 4 32.911 10.429 6.023 1.00 0.00 C ATOM 25 O LEU 4 33.975 11.027 6.185 1.00 0.00 O ATOM 26 CB LEU 4 31.623 11.385 7.953 1.00 0.00 C ATOM 27 CEN LEU 4 30.277 11.924 8.473 1.00 0.00 C ATOM 28 H LEU 4 33.461 9.476 8.654 1.00 0.00 H ATOM 29 N VAL 5 32.476 10.035 4.831 1.00 0.00 N ATOM 30 CA VAL 5 33.287 10.193 3.630 1.00 0.00 C ATOM 31 C VAL 5 32.689 11.238 2.694 1.00 0.00 C ATOM 32 O VAL 5 31.520 11.152 2.321 1.00 0.00 O ATOM 33 CB VAL 5 33.436 8.862 2.869 1.00 0.00 C ATOM 34 CEN VAL 5 33.882 8.363 2.706 1.00 0.00 C ATOM 35 H VAL 5 31.561 9.615 4.755 1.00 0.00 H ATOM 36 N ALA 6 33.499 12.222 2.321 1.00 0.00 N ATOM 37 CA ALA 6 33.063 13.264 1.399 1.00 0.00 C ATOM 38 C ALA 6 34.018 13.391 0.220 1.00 0.00 C ATOM 39 O ALA 6 35.228 13.523 0.399 1.00 0.00 O ATOM 40 CB ALA 6 32.934 14.595 2.126 1.00 0.00 C ATOM 41 CEN ALA 6 32.935 14.595 2.125 1.00 0.00 C ATOM 42 H ALA 6 34.440 12.250 2.685 1.00 0.00 H ATOM 43 N VAL 7 33.466 13.350 -0.989 1.00 0.00 N ATOM 44 CA VAL 7 34.264 13.493 -2.200 1.00 0.00 C ATOM 45 C VAL 7 34.358 14.952 -2.630 1.00 0.00 C ATOM 46 O VAL 7 33.346 15.644 -2.733 1.00 0.00 O ATOM 47 CB VAL 7 33.683 12.663 -3.361 1.00 0.00 C ATOM 48 CEN VAL 7 33.790 12.105 -3.752 1.00 0.00 C ATOM 49 H VAL 7 32.469 13.216 -1.070 1.00 0.00 H ATOM 50 N TRP 8 35.579 15.413 -2.878 1.00 0.00 N ATOM 51 CA TRP 8 35.808 16.794 -3.283 1.00 0.00 C ATOM 52 C TRP 8 36.873 16.879 -4.370 1.00 0.00 C ATOM 53 O TRP 8 37.712 15.988 -4.501 1.00 0.00 O ATOM 54 CB TRP 8 36.221 17.643 -2.079 1.00 0.00 C ATOM 55 CEN TRP 8 35.710 19.011 -1.108 1.00 0.00 C ATOM 56 H TRP 8 36.368 14.790 -2.782 1.00 0.00 H ATOM 57 N ASP 9 36.832 17.955 -5.148 1.00 0.00 N ATOM 58 CA ASP 9 37.816 18.178 -6.200 1.00 0.00 C ATOM 59 C ASP 9 38.481 19.541 -6.053 1.00 0.00 C ATOM 60 O ASP 9 37.805 20.558 -5.900 1.00 0.00 O ATOM 61 CB ASP 9 37.164 18.057 -7.580 1.00 0.00 C ATOM 62 CEN ASP 9 37.040 17.382 -8.332 1.00 0.00 C ATOM 63 H ASP 9 36.101 18.637 -5.007 1.00 0.00 H ATOM 64 N VAL 10 39.809 19.554 -6.100 1.00 0.00 N ATOM 65 CA VAL 10 40.564 20.801 -6.064 1.00 0.00 C ATOM 66 C VAL 10 41.009 21.217 -7.459 1.00 0.00 C ATOM 67 O VAL 10 41.866 20.575 -8.066 1.00 0.00 O ATOM 68 CB VAL 10 41.802 20.684 -5.154 1.00 0.00 C ATOM 69 CEN VAL 10 42.069 20.888 -4.553 1.00 0.00 C ATOM 70 H VAL 10 40.308 18.678 -6.165 1.00 0.00 H ATOM 71 N ALA 11 40.422 22.296 -7.965 1.00 0.00 N ATOM 72 CA ALA 11 40.762 22.805 -9.288 1.00 0.00 C ATOM 73 C ALA 11 41.981 23.718 -9.230 1.00 0.00 C ATOM 74 O ALA 11 41.921 24.815 -8.675 1.00 0.00 O ATOM 75 CB ALA 11 39.575 23.539 -9.895 1.00 0.00 C ATOM 76 CEN ALA 11 39.576 23.539 -9.894 1.00 0.00 C ATOM 77 H ALA 11 39.720 22.777 -7.418 1.00 0.00 H ATOM 78 N LEU 12 43.086 23.258 -9.807 1.00 0.00 N ATOM 79 CA LEU 12 44.321 24.031 -9.821 1.00 0.00 C ATOM 80 C LEU 12 44.856 24.190 -11.238 1.00 0.00 C ATOM 81 O LEU 12 44.191 23.823 -12.207 1.00 0.00 O ATOM 82 CB LEU 12 45.374 23.364 -8.925 1.00 0.00 C ATOM 83 CEN LEU 12 45.913 23.698 -7.521 1.00 0.00 C ATOM 84 H LEU 12 43.069 22.348 -10.247 1.00 0.00 H ATOM 85 N SER 13 46.060 24.738 -11.353 1.00 0.00 N ATOM 86 CA SER 13 46.689 24.941 -12.653 1.00 0.00 C ATOM 87 C SER 13 47.126 23.618 -13.266 1.00 0.00 C ATOM 88 O SER 13 46.871 23.351 -14.441 1.00 0.00 O ATOM 89 CB SER 13 47.874 25.878 -12.519 1.00 0.00 C ATOM 90 CEN SER 13 48.309 26.118 -12.299 1.00 0.00 C ATOM 91 H SER 13 46.553 25.022 -10.519 1.00 0.00 H ATOM 92 N ASP 14 47.786 22.789 -12.463 1.00 0.00 N ATOM 93 CA ASP 14 48.321 21.520 -12.944 1.00 0.00 C ATOM 94 C ASP 14 47.201 20.542 -13.278 1.00 0.00 C ATOM 95 O ASP 14 47.105 20.055 -14.404 1.00 0.00 O ATOM 96 CB ASP 14 49.262 20.906 -11.905 1.00 0.00 C ATOM 97 CEN ASP 14 50.256 20.835 -11.692 1.00 0.00 C ATOM 98 H ASP 14 47.922 23.045 -11.496 1.00 0.00 H ATOM 99 N GLY 15 46.357 20.260 -12.291 1.00 0.00 N ATOM 100 CA GLY 15 45.267 19.306 -12.465 1.00 0.00 C ATOM 101 C GLY 15 44.272 19.391 -11.315 1.00 0.00 C ATOM 102 O GLY 15 44.440 20.190 -10.394 1.00 0.00 O ATOM 103 CEN GLY 15 45.267 19.306 -12.466 1.00 0.00 C ATOM 104 H GLY 15 46.472 20.717 -11.398 1.00 0.00 H ATOM 105 N VAL 16 43.234 18.563 -11.377 1.00 0.00 N ATOM 106 CA VAL 16 42.227 18.518 -10.323 1.00 0.00 C ATOM 107 C VAL 16 42.557 17.447 -9.290 1.00 0.00 C ATOM 108 O VAL 16 42.435 16.253 -9.561 1.00 0.00 O ATOM 109 CB VAL 16 40.823 18.251 -10.894 1.00 0.00 C ATOM 110 CEN VAL 16 40.209 18.540 -11.014 1.00 0.00 C ATOM 111 H VAL 16 43.140 17.949 -12.172 1.00 0.00 H ATOM 112 N HIS 17 42.975 17.883 -8.107 1.00 0.00 N ATOM 113 CA HIS 17 43.357 16.962 -7.044 1.00 0.00 C ATOM 114 C HIS 17 42.132 16.423 -6.315 1.00 0.00 C ATOM 115 O HIS 17 41.180 17.159 -6.053 1.00 0.00 O ATOM 116 CB HIS 17 44.299 17.645 -6.047 1.00 0.00 C ATOM 117 CEN HIS 17 45.701 17.761 -5.817 1.00 0.00 C ATOM 118 H HIS 17 43.031 18.877 -7.940 1.00 0.00 H ATOM 119 N LYS 18 42.162 15.135 -5.990 1.00 0.00 N ATOM 120 CA LYS 18 41.060 14.499 -5.277 1.00 0.00 C ATOM 121 C LYS 18 41.249 14.599 -3.769 1.00 0.00 C ATOM 122 O LYS 18 42.270 14.172 -3.231 1.00 0.00 O ATOM 123 CB LYS 18 40.927 13.034 -5.695 1.00 0.00 C ATOM 124 CEN LYS 18 39.899 11.554 -6.803 1.00 0.00 C ATOM 125 H LYS 18 42.968 14.582 -6.242 1.00 0.00 H ATOM 126 N ILE 19 40.257 15.167 -3.090 1.00 0.00 N ATOM 127 CA ILE 19 40.339 15.383 -1.651 1.00 0.00 C ATOM 128 C ILE 19 39.187 14.702 -0.924 1.00 0.00 C ATOM 129 O ILE 19 38.130 14.462 -1.506 1.00 0.00 O ATOM 130 CB ILE 19 40.338 16.883 -1.304 1.00 0.00 C ATOM 131 CEN ILE 19 40.958 17.773 -1.185 1.00 0.00 C ATOM 132 H ILE 19 39.425 15.456 -3.584 1.00 0.00 H ATOM 133 N GLU 20 39.398 14.392 0.350 1.00 0.00 N ATOM 134 CA GLU 20 38.352 13.808 1.181 1.00 0.00 C ATOM 135 C GLU 20 38.167 14.598 2.470 1.00 0.00 C ATOM 136 O GLU 20 38.979 14.502 3.391 1.00 0.00 O ATOM 137 CB GLU 20 38.675 12.347 1.501 1.00 0.00 C ATOM 138 CEN GLU 20 38.461 10.685 1.190 1.00 0.00 C ATOM 139 H GLU 20 40.308 14.566 0.754 1.00 0.00 H ATOM 140 N PHE 21 37.094 15.379 2.531 1.00 0.00 N ATOM 141 CA PHE 21 36.794 16.180 3.712 1.00 0.00 C ATOM 142 C PHE 21 36.057 15.359 4.761 1.00 0.00 C ATOM 143 O PHE 21 34.914 14.949 4.553 1.00 0.00 O ATOM 144 CB PHE 21 35.968 17.409 3.329 1.00 0.00 C ATOM 145 CEN PHE 21 36.201 18.953 3.033 1.00 0.00 C ATOM 146 H PHE 21 36.469 15.420 1.738 1.00 0.00 H ATOM 147 N GLU 22 36.716 15.122 5.891 1.00 0.00 N ATOM 148 CA GLU 22 36.119 14.357 6.979 1.00 0.00 C ATOM 149 C GLU 22 36.343 15.043 8.321 1.00 0.00 C ATOM 150 O GLU 22 37.115 15.995 8.421 1.00 0.00 O ATOM 151 CB GLU 22 36.692 12.938 7.012 1.00 0.00 C ATOM 152 CEN GLU 22 36.557 11.282 6.634 1.00 0.00 C ATOM 153 H GLU 22 37.653 15.482 5.998 1.00 0.00 H ATOM 154 N HIS 23 35.660 14.553 9.350 1.00 0.00 N ATOM 155 CA HIS 23 35.929 14.977 10.720 1.00 0.00 C ATOM 156 C HIS 23 37.029 14.134 11.351 1.00 0.00 C ATOM 157 O HIS 23 37.047 12.912 11.210 1.00 0.00 O ATOM 158 CB HIS 23 34.657 14.899 11.570 1.00 0.00 C ATOM 159 CEN HIS 23 33.609 15.765 11.998 1.00 0.00 C ATOM 160 H HIS 23 34.937 13.869 9.181 1.00 0.00 H ATOM 161 N GLY 24 37.947 14.797 12.047 1.00 0.00 N ATOM 162 CA GLY 24 38.884 14.108 12.929 1.00 0.00 C ATOM 163 C GLY 24 38.169 13.510 14.133 1.00 0.00 C ATOM 164 O GLY 24 37.419 14.198 14.827 1.00 0.00 O ATOM 165 CEN GLY 24 38.884 14.108 12.929 1.00 0.00 C ATOM 166 H GLY 24 37.999 15.802 11.965 1.00 0.00 H ATOM 167 N THR 25 38.405 12.225 14.376 1.00 0.00 N ATOM 168 CA THR 25 37.665 11.490 15.395 1.00 0.00 C ATOM 169 C THR 25 38.067 11.934 16.796 1.00 0.00 C ATOM 170 O THR 25 37.363 11.666 17.769 1.00 0.00 O ATOM 171 CB THR 25 37.884 9.971 15.267 1.00 0.00 C ATOM 172 CEN THR 25 37.852 9.471 14.966 1.00 0.00 C ATOM 173 H THR 25 39.115 11.745 13.842 1.00 0.00 H ATOM 174 N THR 26 39.205 12.614 16.892 1.00 0.00 N ATOM 175 CA THR 26 39.676 13.144 18.165 1.00 0.00 C ATOM 176 C THR 26 39.171 14.563 18.393 1.00 0.00 C ATOM 177 O THR 26 38.504 14.843 19.388 1.00 0.00 O ATOM 178 CB THR 26 41.214 13.139 18.245 1.00 0.00 C ATOM 179 CEN THR 26 41.728 12.861 18.236 1.00 0.00 C ATOM 180 H THR 26 39.757 12.768 16.060 1.00 0.00 H ATOM 181 N SER 27 39.493 15.456 17.463 1.00 0.00 N ATOM 182 CA SER 27 39.212 16.876 17.635 1.00 0.00 C ATOM 183 C SER 27 37.871 17.251 17.016 1.00 0.00 C ATOM 184 O SER 27 37.216 18.195 17.457 1.00 0.00 O ATOM 185 CB SER 27 40.324 17.707 17.027 1.00 0.00 C ATOM 186 CEN SER 27 40.720 17.852 16.683 1.00 0.00 C ATOM 187 H SER 27 39.945 15.143 16.616 1.00 0.00 H ATOM 188 N GLY 28 37.469 16.505 15.992 1.00 0.00 N ATOM 189 CA GLY 28 36.294 16.856 15.205 1.00 0.00 C ATOM 190 C GLY 28 36.483 18.190 14.495 1.00 0.00 C ATOM 191 O GLY 28 35.513 18.859 14.139 1.00 0.00 O ATOM 192 CEN GLY 28 36.293 16.856 15.204 1.00 0.00 C ATOM 193 H GLY 28 37.991 15.674 15.753 1.00 0.00 H ATOM 194 N LYS 29 37.739 18.574 14.293 1.00 0.00 N ATOM 195 CA LYS 29 38.093 19.511 13.234 1.00 0.00 C ATOM 196 C LYS 29 37.825 18.915 11.859 1.00 0.00 C ATOM 197 O LYS 29 37.804 17.695 11.694 1.00 0.00 O ATOM 198 CB LYS 29 39.561 19.924 13.352 1.00 0.00 C ATOM 199 CEN LYS 29 40.992 21.379 13.907 1.00 0.00 C ATOM 200 H LYS 29 38.468 18.206 14.889 1.00 0.00 H ATOM 201 N ARG 30 37.622 19.782 10.873 1.00 0.00 N ATOM 202 CA ARG 30 37.474 19.347 9.489 1.00 0.00 C ATOM 203 C ARG 30 38.808 18.906 8.903 1.00 0.00 C ATOM 204 O ARG 30 39.813 19.607 9.023 1.00 0.00 O ATOM 205 CB ARG 30 36.810 20.408 8.623 1.00 0.00 C ATOM 206 CEN ARG 30 35.061 21.674 7.400 1.00 0.00 C ATOM 207 H ARG 30 37.570 20.768 11.087 1.00 0.00 H ATOM 208 N VAL 31 38.814 17.738 8.270 1.00 0.00 N ATOM 209 CA VAL 31 40.029 17.192 7.677 1.00 0.00 C ATOM 210 C VAL 31 39.971 17.243 6.156 1.00 0.00 C ATOM 211 O VAL 31 39.091 16.642 5.538 1.00 0.00 O ATOM 212 CB VAL 31 40.272 15.738 8.123 1.00 0.00 C ATOM 213 CEN VAL 31 40.676 15.338 8.513 1.00 0.00 C ATOM 214 H VAL 31 37.953 17.214 8.196 1.00 0.00 H ATOM 215 N VAL 32 40.913 17.963 5.557 1.00 0.00 N ATOM 216 CA VAL 32 41.058 17.979 4.106 1.00 0.00 C ATOM 217 C VAL 32 42.275 17.177 3.665 1.00 0.00 C ATOM 218 O VAL 32 43.394 17.429 4.113 1.00 0.00 O ATOM 219 CB VAL 32 41.182 19.417 3.567 1.00 0.00 C ATOM 220 CEN VAL 32 40.852 19.905 3.210 1.00 0.00 C ATOM 221 H VAL 32 41.546 18.513 6.120 1.00 0.00 H ATOM 222 N TYR 33 42.052 16.208 2.784 1.00 0.00 N ATOM 223 CA TYR 33 43.139 15.413 2.224 1.00 0.00 C ATOM 224 C TYR 33 43.416 15.802 0.778 1.00 0.00 C ATOM 225 O TYR 33 42.518 15.782 -0.064 1.00 0.00 O ATOM 226 CB TYR 33 42.813 13.921 2.314 1.00 0.00 C ATOM 227 CEN TYR 33 43.173 12.519 3.300 1.00 0.00 C ATOM 228 H TYR 33 41.102 16.016 2.494 1.00 0.00 H ATOM 229 N VAL 34 44.665 16.155 0.494 1.00 0.00 N ATOM 230 CA VAL 34 45.102 16.396 -0.876 1.00 0.00 C ATOM 231 C VAL 34 46.070 15.316 -1.343 1.00 0.00 C ATOM 232 O VAL 34 47.172 15.185 -0.812 1.00 0.00 O ATOM 233 CB VAL 34 45.776 17.773 -1.019 1.00 0.00 C ATOM 234 CEN VAL 34 45.696 18.405 -1.283 1.00 0.00 C ATOM 235 H VAL 34 45.330 16.259 1.248 1.00 0.00 H ATOM 236 N ASP 35 45.650 14.545 -2.342 1.00 0.00 N ATOM 237 CA ASP 35 46.437 13.416 -2.819 1.00 0.00 C ATOM 238 C ASP 35 46.782 12.463 -1.682 1.00 0.00 C ATOM 239 O ASP 35 47.875 11.898 -1.641 1.00 0.00 O ATOM 240 CB ASP 35 47.717 13.903 -3.502 1.00 0.00 C ATOM 241 CEN ASP 35 48.087 14.095 -4.431 1.00 0.00 C ATOM 242 H ASP 35 44.763 14.748 -2.780 1.00 0.00 H ATOM 243 N GLY 36 45.843 12.289 -0.758 1.00 0.00 N ATOM 244 CA GLY 36 45.937 11.231 0.240 1.00 0.00 C ATOM 245 C GLY 36 46.536 11.750 1.541 1.00 0.00 C ATOM 246 O GLY 36 46.564 11.044 2.549 1.00 0.00 O ATOM 247 CEN GLY 36 45.937 11.229 0.240 1.00 0.00 C ATOM 248 H GLY 36 45.044 12.906 -0.746 1.00 0.00 H ATOM 249 N LYS 37 47.015 12.989 1.511 1.00 0.00 N ATOM 250 CA LYS 37 47.665 13.586 2.671 1.00 0.00 C ATOM 251 C LYS 37 46.813 14.698 3.269 1.00 0.00 C ATOM 252 O LYS 37 46.264 15.530 2.545 1.00 0.00 O ATOM 253 CB LYS 37 49.045 14.127 2.293 1.00 0.00 C ATOM 254 CEN LYS 37 51.149 13.907 2.335 1.00 0.00 C ATOM 255 H LYS 37 46.927 13.531 0.663 1.00 0.00 H ATOM 256 N GLU 38 46.705 14.708 4.593 1.00 0.00 N ATOM 257 CA GLU 38 45.970 15.754 5.295 1.00 0.00 C ATOM 258 C GLU 38 46.853 16.967 5.556 1.00 0.00 C ATOM 259 O GLU 38 47.586 17.011 6.545 1.00 0.00 O ATOM 260 CB GLU 38 45.405 15.220 6.612 1.00 0.00 C ATOM 261 CEN GLU 38 44.102 14.594 7.514 1.00 0.00 C ATOM 262 H GLU 38 47.143 13.972 5.128 1.00 0.00 H ATOM 263 N GLU 39 46.778 17.951 4.667 1.00 0.00 N ATOM 264 CA GLU 39 47.666 19.106 4.726 1.00 0.00 C ATOM 265 C GLU 39 46.959 20.312 5.330 1.00 0.00 C ATOM 266 O GLU 39 47.586 21.332 5.617 1.00 0.00 O ATOM 267 CB GLU 39 48.193 19.449 3.331 1.00 0.00 C ATOM 268 CEN GLU 39 49.425 19.372 2.158 1.00 0.00 C ATOM 269 H GLU 39 46.090 17.897 3.931 1.00 0.00 H ATOM 270 N ILE 40 45.649 20.191 5.519 1.00 0.00 N ATOM 271 CA ILE 40 44.841 21.299 6.012 1.00 0.00 C ATOM 272 C ILE 40 43.663 20.798 6.839 1.00 0.00 C ATOM 273 O ILE 40 42.993 19.838 6.462 1.00 0.00 O ATOM 274 CB ILE 40 44.311 22.169 4.857 1.00 0.00 C ATOM 275 CEN ILE 40 44.537 23.004 4.191 1.00 0.00 C ATOM 276 H ILE 40 45.203 19.308 5.317 1.00 0.00 H ATOM 277 N ARG 41 43.417 21.455 7.967 1.00 0.00 N ATOM 278 CA ARG 41 42.208 21.215 8.745 1.00 0.00 C ATOM 279 C ARG 41 41.677 22.506 9.353 1.00 0.00 C ATOM 280 O ARG 41 42.373 23.175 10.117 1.00 0.00 O ATOM 281 CB ARG 41 42.412 20.142 9.806 1.00 0.00 C ATOM 282 CEN ARG 41 42.416 17.930 10.928 1.00 0.00 C ATOM 283 H ARG 41 44.085 22.139 8.295 1.00 0.00 H ATOM 284 N LYS 42 40.442 22.852 9.010 1.00 0.00 N ATOM 285 CA LYS 42 39.800 24.043 9.554 1.00 0.00 C ATOM 286 C LYS 42 38.297 23.843 9.694 1.00 0.00 C ATOM 287 O LYS 42 37.719 22.951 9.075 1.00 0.00 O ATOM 288 CB LYS 42 40.089 25.257 8.670 1.00 0.00 C ATOM 289 CEN LYS 42 41.161 27.055 8.358 1.00 0.00 C ATOM 290 H LYS 42 39.933 22.275 8.355 1.00 0.00 H ATOM 291 N GLU 43 37.667 24.680 10.512 1.00 0.00 N ATOM 292 CA GLU 43 36.220 24.641 10.684 1.00 0.00 C ATOM 293 C GLU 43 35.577 25.950 10.247 1.00 0.00 C ATOM 294 O GLU 43 36.194 27.014 10.327 1.00 0.00 O ATOM 295 CB GLU 43 35.862 24.340 12.142 1.00 0.00 C ATOM 296 CEN GLU 43 35.389 23.234 13.347 1.00 0.00 C ATOM 297 H GLU 43 38.206 25.362 11.028 1.00 0.00 H ATOM 298 N TRP 44 34.335 25.869 9.783 1.00 0.00 N ATOM 299 CA TRP 44 33.669 27.011 9.170 1.00 0.00 C ATOM 300 C TRP 44 32.262 27.192 9.725 1.00 0.00 C ATOM 301 O TRP 44 31.645 26.239 10.201 1.00 0.00 O ATOM 302 CB TRP 44 33.615 26.844 7.650 1.00 0.00 C ATOM 303 CEN TRP 44 34.173 27.573 6.156 1.00 0.00 C ATOM 304 H TRP 44 33.839 24.992 9.860 1.00 0.00 H ATOM 305 N MET 45 31.759 28.420 9.661 1.00 0.00 N ATOM 306 CA MET 45 30.339 28.678 9.866 1.00 0.00 C ATOM 307 C MET 45 29.500 28.061 8.756 1.00 0.00 C ATOM 308 O MET 45 28.375 27.619 8.987 1.00 0.00 O ATOM 309 CB MET 45 30.083 30.182 9.949 1.00 0.00 C ATOM 310 CEN MET 45 29.642 31.462 11.065 1.00 0.00 C ATOM 311 H MET 45 32.377 29.194 9.464 1.00 0.00 H ATOM 312 N PHE 46 30.053 28.034 7.548 1.00 0.00 N ATOM 313 CA PHE 46 29.364 27.454 6.402 1.00 0.00 C ATOM 314 C PHE 46 29.419 25.932 6.439 1.00 0.00 C ATOM 315 O PHE 46 28.428 25.258 6.159 1.00 0.00 O ATOM 316 CB PHE 46 29.971 27.970 5.095 1.00 0.00 C ATOM 317 CEN PHE 46 29.667 29.083 4.002 1.00 0.00 C ATOM 318 H PHE 46 30.976 28.426 7.421 1.00 0.00 H ATOM 319 N LYS 47 30.584 25.395 6.787 1.00 0.00 N ATOM 320 CA LYS 47 30.760 23.951 6.896 1.00 0.00 C ATOM 321 C LYS 47 29.955 23.386 8.059 1.00 0.00 C ATOM 322 O LYS 47 29.583 22.212 8.056 1.00 0.00 O ATOM 323 CB LYS 47 32.240 23.604 7.062 1.00 0.00 C ATOM 324 CEN LYS 47 34.032 22.868 6.213 1.00 0.00 C ATOM 325 H LYS 47 31.367 26.002 6.980 1.00 0.00 H ATOM 326 N LEU 48 29.688 24.227 9.052 1.00 0.00 N ATOM 327 CA LEU 48 28.926 23.810 10.224 1.00 0.00 C ATOM 328 C LEU 48 27.454 23.616 9.881 1.00 0.00 C ATOM 329 O LEU 48 26.712 22.978 10.629 1.00 0.00 O ATOM 330 CB LEU 48 29.080 24.841 11.349 1.00 0.00 C ATOM 331 CEN LEU 48 29.897 24.848 12.655 1.00 0.00 C ATOM 332 H LEU 48 30.023 25.178 8.995 1.00 0.00 H ATOM 333 N VAL 49 27.037 24.170 8.748 1.00 0.00 N ATOM 334 CA VAL 49 25.650 24.067 8.311 1.00 0.00 C ATOM 335 C VAL 49 25.479 22.960 7.278 1.00 0.00 C ATOM 336 O VAL 49 24.394 22.773 6.727 1.00 0.00 O ATOM 337 CB VAL 49 25.146 25.393 7.714 1.00 0.00 C ATOM 338 CEN VAL 49 24.726 25.928 7.826 1.00 0.00 C ATOM 339 H VAL 49 27.697 24.675 8.175 1.00 0.00 H ATOM 340 N GLY 50 26.557 22.227 7.019 1.00 0.00 N ATOM 341 CA GLY 50 26.500 21.060 6.148 1.00 0.00 C ATOM 342 C GLY 50 27.095 21.365 4.779 1.00 0.00 C ATOM 343 O GLY 50 26.968 20.572 3.846 1.00 0.00 O ATOM 344 CEN GLY 50 26.499 21.060 6.147 1.00 0.00 C ATOM 345 H GLY 50 27.440 22.487 7.437 1.00 0.00 H ATOM 346 N LYS 51 27.744 22.519 4.664 1.00 0.00 N ATOM 347 CA LYS 51 28.350 22.935 3.405 1.00 0.00 C ATOM 348 C LYS 51 29.725 22.305 3.221 1.00 0.00 C ATOM 349 O LYS 51 30.507 22.211 4.168 1.00 0.00 O ATOM 350 CB LYS 51 28.457 24.459 3.341 1.00 0.00 C ATOM 351 CEN LYS 51 27.731 26.294 2.578 1.00 0.00 C ATOM 352 H LYS 51 27.819 23.122 5.471 1.00 0.00 H ATOM 353 N GLU 52 30.014 21.875 1.998 1.00 0.00 N ATOM 354 CA GLU 52 31.350 21.411 1.645 1.00 0.00 C ATOM 355 C GLU 52 32.239 22.570 1.212 1.00 0.00 C ATOM 356 O GLU 52 31.749 23.613 0.780 1.00 0.00 O ATOM 357 CB GLU 52 31.276 20.361 0.534 1.00 0.00 C ATOM 358 CEN GLU 52 31.281 18.730 0.041 1.00 0.00 C ATOM 359 H GLU 52 29.289 21.869 1.294 1.00 0.00 H ATOM 360 N THR 53 33.549 22.380 1.330 1.00 0.00 N ATOM 361 CA THR 53 34.505 23.442 1.044 1.00 0.00 C ATOM 362 C THR 53 35.735 22.899 0.328 1.00 0.00 C ATOM 363 O THR 53 36.274 21.857 0.704 1.00 0.00 O ATOM 364 CB THR 53 34.950 24.164 2.331 1.00 0.00 C ATOM 365 CEN THR 53 34.834 24.476 2.811 1.00 0.00 C ATOM 366 H THR 53 33.890 21.477 1.625 1.00 0.00 H ATOM 367 N PHE 54 36.175 23.610 -0.704 1.00 0.00 N ATOM 368 CA PHE 54 37.412 23.269 -1.399 1.00 0.00 C ATOM 369 C PHE 54 38.395 24.431 -1.374 1.00 0.00 C ATOM 370 O PHE 54 38.003 25.591 -1.514 1.00 0.00 O ATOM 371 CB PHE 54 37.118 22.857 -2.842 1.00 0.00 C ATOM 372 CEN PHE 54 36.939 21.520 -3.684 1.00 0.00 C ATOM 373 H PHE 54 35.639 24.406 -1.017 1.00 0.00 H ATOM 374 N TYR 55 39.673 24.117 -1.198 1.00 0.00 N ATOM 375 CA TYR 55 40.735 25.100 -1.362 1.00 0.00 C ATOM 376 C TYR 55 41.556 24.821 -2.615 1.00 0.00 C ATOM 377 O TYR 55 41.981 23.691 -2.851 1.00 0.00 O ATOM 378 CB TYR 55 41.645 25.117 -0.132 1.00 0.00 C ATOM 379 CEN TYR 55 41.916 26.040 1.333 1.00 0.00 C ATOM 380 H TYR 55 39.915 23.169 -0.943 1.00 0.00 H ATOM 381 N VAL 56 41.775 25.859 -3.416 1.00 0.00 N ATOM 382 CA VAL 56 42.629 25.751 -4.593 1.00 0.00 C ATOM 383 C VAL 56 43.959 26.460 -4.376 1.00 0.00 C ATOM 384 O VAL 56 43.996 27.656 -4.088 1.00 0.00 O ATOM 385 CB VAL 56 41.944 26.337 -5.843 1.00 0.00 C ATOM 386 CEN VAL 56 41.653 26.170 -6.445 1.00 0.00 C ATOM 387 H VAL 56 41.339 26.745 -3.204 1.00 0.00 H ATOM 388 N GLY 57 45.050 25.715 -4.515 1.00 0.00 N ATOM 389 CA GLY 57 46.387 26.283 -4.392 1.00 0.00 C ATOM 390 C GLY 57 47.166 26.145 -5.694 1.00 0.00 C ATOM 391 O GLY 57 47.276 25.053 -6.250 1.00 0.00 O ATOM 392 CEN GLY 57 46.388 26.283 -4.392 1.00 0.00 C ATOM 393 H GLY 57 44.951 24.728 -4.711 1.00 0.00 H ATOM 394 N ALA 58 47.707 27.260 -6.174 1.00 0.00 N ATOM 395 CA ALA 58 48.564 27.249 -7.353 1.00 0.00 C ATOM 396 C ALA 58 49.650 28.312 -7.254 1.00 0.00 C ATOM 397 O ALA 58 49.367 29.509 -7.301 1.00 0.00 O ATOM 398 CB ALA 58 47.735 27.449 -8.614 1.00 0.00 C ATOM 399 CEN ALA 58 47.736 27.449 -8.613 1.00 0.00 C ATOM 400 H ALA 58 47.518 28.138 -5.711 1.00 0.00 H ATOM 401 N ALA 59 50.896 27.868 -7.119 1.00 0.00 N ATOM 402 CA ALA 59 52.007 28.774 -6.856 1.00 0.00 C ATOM 403 C ALA 59 52.044 29.189 -5.390 1.00 0.00 C ATOM 404 O ALA 59 52.049 28.342 -4.496 1.00 0.00 O ATOM 405 CB ALA 59 51.918 29.998 -7.754 1.00 0.00 C ATOM 406 CEN ALA 59 51.918 29.998 -7.753 1.00 0.00 C ATOM 407 H ALA 59 51.075 26.878 -7.200 1.00 0.00 H ATOM 408 N LYS 60 52.071 30.495 -5.150 1.00 0.00 N ATOM 409 CA LYS 60 52.000 31.027 -3.795 1.00 0.00 C ATOM 410 C LYS 60 50.564 31.353 -3.406 1.00 0.00 C ATOM 411 O LYS 60 50.241 31.463 -2.223 1.00 0.00 O ATOM 412 CB LYS 60 52.876 32.274 -3.663 1.00 0.00 C ATOM 413 CEN LYS 60 54.667 33.162 -2.971 1.00 0.00 C ATOM 414 H LYS 60 52.143 31.136 -5.928 1.00 0.00 H ATOM 415 N THR 61 49.705 31.506 -4.408 1.00 0.00 N ATOM 416 CA THR 61 48.376 32.067 -4.198 1.00 0.00 C ATOM 417 C THR 61 47.353 30.973 -3.920 1.00 0.00 C ATOM 418 O THR 61 47.501 29.840 -4.379 1.00 0.00 O ATOM 419 CB THR 61 47.912 32.891 -5.414 1.00 0.00 C ATOM 420 CEN THR 61 47.977 33.335 -5.788 1.00 0.00 C ATOM 421 H THR 61 49.979 31.226 -5.338 1.00 0.00 H ATOM 422 N LYS 62 46.315 31.319 -3.166 1.00 0.00 N ATOM 423 CA LYS 62 45.315 30.344 -2.746 1.00 0.00 C ATOM 424 C LYS 62 43.914 30.940 -2.784 1.00 0.00 C ATOM 425 O LYS 62 43.717 32.107 -2.445 1.00 0.00 O ATOM 426 CB LYS 62 45.629 29.827 -1.341 1.00 0.00 C ATOM 427 CEN LYS 62 46.373 28.279 -0.105 1.00 0.00 C ATOM 428 H LYS 62 46.216 32.281 -2.876 1.00 0.00 H ATOM 429 N ALA 63 42.944 30.132 -3.199 1.00 0.00 N ATOM 430 CA ALA 63 41.564 30.589 -3.312 1.00 0.00 C ATOM 431 C ALA 63 40.591 29.532 -2.803 1.00 0.00 C ATOM 432 O ALA 63 40.586 28.398 -3.280 1.00 0.00 O ATOM 433 CB ALA 63 41.244 30.957 -4.754 1.00 0.00 C ATOM 434 CEN ALA 63 41.244 30.956 -4.753 1.00 0.00 C ATOM 435 H ALA 63 43.168 29.178 -3.441 1.00 0.00 H ATOM 436 N THR 64 39.769 29.913 -1.831 1.00 0.00 N ATOM 437 CA THR 64 38.776 29.006 -1.269 1.00 0.00 C ATOM 438 C THR 64 37.551 28.903 -2.170 1.00 0.00 C ATOM 439 O THR 64 37.060 29.909 -2.682 1.00 0.00 O ATOM 440 CB THR 64 38.330 29.455 0.135 1.00 0.00 C ATOM 441 CEN THR 64 38.444 29.583 0.693 1.00 0.00 C ATOM 442 H THR 64 39.834 30.855 -1.472 1.00 0.00 H ATOM 443 N ILE 65 37.064 27.682 -2.361 1.00 0.00 N ATOM 444 CA ILE 65 35.913 27.443 -3.224 1.00 0.00 C ATOM 445 C ILE 65 34.665 27.137 -2.406 1.00 0.00 C ATOM 446 O ILE 65 34.685 26.280 -1.523 1.00 0.00 O ATOM 447 CB ILE 65 36.171 26.283 -4.202 1.00 0.00 C ATOM 448 CEN ILE 65 36.593 26.008 -5.169 1.00 0.00 C ATOM 449 H ILE 65 37.502 26.900 -1.897 1.00 0.00 H ATOM 450 N ASN 66 33.580 27.845 -2.703 1.00 0.00 N ATOM 451 CA ASN 66 32.248 27.403 -2.311 1.00 0.00 C ATOM 452 C ASN 66 31.640 26.482 -3.361 1.00 0.00 C ATOM 453 O ASN 66 31.242 26.928 -4.437 1.00 0.00 O ATOM 454 CB ASN 66 31.327 28.581 -2.051 1.00 0.00 C ATOM 455 CEN ASN 66 31.025 29.174 -1.240 1.00 0.00 C ATOM 456 H ASN 66 33.681 28.709 -3.214 1.00 0.00 H ATOM 457 N ILE 67 31.572 25.193 -3.042 1.00 0.00 N ATOM 458 CA ILE 67 31.133 24.189 -4.004 1.00 0.00 C ATOM 459 C ILE 67 29.652 23.876 -3.835 1.00 0.00 C ATOM 460 O ILE 67 29.204 23.517 -2.747 1.00 0.00 O ATOM 461 CB ILE 67 31.942 22.886 -3.869 1.00 0.00 C ATOM 462 CEN ILE 67 32.852 22.364 -4.170 1.00 0.00 C ATOM 463 H ILE 67 31.831 24.903 -2.110 1.00 0.00 H ATOM 464 N ASP 68 28.897 24.014 -4.919 1.00 0.00 N ATOM 465 CA ASP 68 27.480 23.668 -4.916 1.00 0.00 C ATOM 466 C ASP 68 27.187 22.533 -5.888 1.00 0.00 C ATOM 467 O ASP 68 27.505 22.622 -7.074 1.00 0.00 O ATOM 468 CB ASP 68 26.629 24.892 -5.264 1.00 0.00 C ATOM 469 CEN ASP 68 26.086 25.624 -4.810 1.00 0.00 C ATOM 470 H ASP 68 29.314 24.367 -5.769 1.00 0.00 H ATOM 471 N ALA 69 26.580 21.467 -5.380 1.00 0.00 N ATOM 472 CA ALA 69 26.237 20.314 -6.205 1.00 0.00 C ATOM 473 C ALA 69 24.728 20.172 -6.353 1.00 0.00 C ATOM 474 O ALA 69 24.230 19.115 -6.742 1.00 0.00 O ATOM 475 CB ALA 69 26.837 19.045 -5.617 1.00 0.00 C ATOM 476 CEN ALA 69 26.837 19.045 -5.618 1.00 0.00 C ATOM 477 H ALA 69 26.349 21.454 -4.397 1.00 0.00 H ATOM 478 N ILE 70 24.004 21.241 -6.039 1.00 0.00 N ATOM 479 CA ILE 70 22.550 21.241 -6.146 1.00 0.00 C ATOM 480 C ILE 70 22.104 21.072 -7.593 1.00 0.00 C ATOM 481 O ILE 70 21.053 20.492 -7.864 1.00 0.00 O ATOM 482 CB ILE 70 21.941 22.535 -5.578 1.00 0.00 C ATOM 483 CEN ILE 70 21.590 23.035 -4.676 1.00 0.00 C ATOM 484 H ILE 70 24.474 22.076 -5.720 1.00 0.00 H ATOM 485 N SER 71 22.910 21.582 -8.518 1.00 0.00 N ATOM 486 CA SER 71 22.678 21.362 -9.941 1.00 0.00 C ATOM 487 C SER 71 23.993 21.282 -10.707 1.00 0.00 C ATOM 488 O SER 71 24.560 22.304 -11.093 1.00 0.00 O ATOM 489 CB SER 71 21.805 22.466 -10.504 1.00 0.00 C ATOM 490 CEN SER 71 21.596 22.963 -10.573 1.00 0.00 C ATOM 491 H SER 71 23.703 22.136 -8.229 1.00 0.00 H ATOM 492 N GLY 72 24.473 20.063 -10.923 1.00 0.00 N ATOM 493 CA GLY 72 25.797 19.851 -11.497 1.00 0.00 C ATOM 494 C GLY 72 26.891 20.202 -10.498 1.00 0.00 C ATOM 495 O GLY 72 26.813 19.841 -9.324 1.00 0.00 O ATOM 496 CEN GLY 72 25.797 19.851 -11.497 1.00 0.00 C ATOM 497 H GLY 72 23.906 19.261 -10.685 1.00 0.00 H ATOM 498 N PHE 73 27.913 20.907 -10.971 1.00 0.00 N ATOM 499 CA PHE 73 28.955 21.430 -10.095 1.00 0.00 C ATOM 500 C PHE 73 29.190 22.914 -10.342 1.00 0.00 C ATOM 501 O PHE 73 29.597 23.315 -11.432 1.00 0.00 O ATOM 502 CB PHE 73 30.257 20.651 -10.291 1.00 0.00 C ATOM 503 CEN PHE 73 31.049 19.463 -9.592 1.00 0.00 C ATOM 504 H PHE 73 27.969 21.087 -11.963 1.00 0.00 H ATOM 505 N ALA 74 28.931 23.726 -9.323 1.00 0.00 N ATOM 506 CA ALA 74 29.328 25.129 -9.341 1.00 0.00 C ATOM 507 C ALA 74 30.304 25.440 -8.213 1.00 0.00 C ATOM 508 O ALA 74 30.104 25.021 -7.073 1.00 0.00 O ATOM 509 CB ALA 74 28.104 26.028 -9.250 1.00 0.00 C ATOM 510 CEN ALA 74 28.105 26.027 -9.250 1.00 0.00 C ATOM 511 H ALA 74 28.448 23.362 -8.514 1.00 0.00 H ATOM 512 N TYR 75 31.360 26.178 -8.537 1.00 0.00 N ATOM 513 CA TYR 75 32.313 26.636 -7.533 1.00 0.00 C ATOM 514 C TYR 75 32.528 28.142 -7.623 1.00 0.00 C ATOM 515 O TYR 75 32.357 28.740 -8.686 1.00 0.00 O ATOM 516 CB TYR 75 33.648 25.905 -7.688 1.00 0.00 C ATOM 517 CEN TYR 75 34.547 24.576 -6.985 1.00 0.00 C ATOM 518 H TYR 75 31.507 26.429 -9.505 1.00 0.00 H ATOM 519 N GLU 76 32.903 28.749 -6.503 1.00 0.00 N ATOM 520 CA GLU 76 33.277 30.158 -6.483 1.00 0.00 C ATOM 521 C GLU 76 34.689 30.346 -5.943 1.00 0.00 C ATOM 522 O GLU 76 34.959 30.069 -4.775 1.00 0.00 O ATOM 523 CB GLU 76 32.282 30.965 -5.647 1.00 0.00 C ATOM 524 CEN GLU 76 30.924 31.989 -5.548 1.00 0.00 C ATOM 525 H GLU 76 32.930 28.222 -5.643 1.00 0.00 H ATOM 526 N TYR 77 35.587 30.819 -6.802 1.00 0.00 N ATOM 527 CA TYR 77 36.985 30.995 -6.427 1.00 0.00 C ATOM 528 C TYR 77 37.266 32.431 -6.006 1.00 0.00 C ATOM 529 O TYR 77 36.819 33.377 -6.654 1.00 0.00 O ATOM 530 CB TYR 77 37.903 30.598 -7.586 1.00 0.00 C ATOM 531 CEN TYR 77 38.897 29.258 -8.120 1.00 0.00 C ATOM 532 H TYR 77 35.293 31.063 -7.736 1.00 0.00 H ATOM 533 N THR 78 38.011 32.587 -4.917 1.00 0.00 N ATOM 534 CA THR 78 38.520 33.895 -4.519 1.00 0.00 C ATOM 535 C THR 78 40.043 33.899 -4.464 1.00 0.00 C ATOM 536 O THR 78 40.651 33.077 -3.779 1.00 0.00 O ATOM 537 CB THR 78 37.967 34.323 -3.148 1.00 0.00 C ATOM 538 CEN THR 78 37.523 34.452 -2.789 1.00 0.00 C ATOM 539 H THR 78 38.229 31.781 -4.350 1.00 0.00 H ATOM 540 N LEU 79 40.653 34.829 -5.190 1.00 0.00 N ATOM 541 CA LEU 79 42.072 35.120 -5.027 1.00 0.00 C ATOM 542 C LEU 79 42.285 36.405 -4.238 1.00 0.00 C ATOM 543 O LEU 79 41.711 37.445 -4.560 1.00 0.00 O ATOM 544 CB LEU 79 42.754 35.218 -6.398 1.00 0.00 C ATOM 545 CEN LEU 79 43.676 34.261 -7.177 1.00 0.00 C ATOM 546 H LEU 79 40.120 35.349 -5.873 1.00 0.00 H ATOM 547 N GLU 80 43.113 36.327 -3.201 1.00 0.00 N ATOM 548 CA GLU 80 43.253 37.421 -2.249 1.00 0.00 C ATOM 549 C GLU 80 44.540 38.200 -2.490 1.00 0.00 C ATOM 550 O GLU 80 45.639 37.681 -2.292 1.00 0.00 O ATOM 551 CB GLU 80 43.224 36.889 -0.814 1.00 0.00 C ATOM 552 CEN GLU 80 42.375 36.594 0.634 1.00 0.00 C ATOM 553 H GLU 80 43.659 35.488 -3.070 1.00 0.00 H ATOM 554 N ILE 81 44.396 39.449 -2.921 1.00 0.00 N ATOM 555 CA ILE 81 45.547 40.284 -3.246 1.00 0.00 C ATOM 556 C ILE 81 45.625 41.497 -2.327 1.00 0.00 C ATOM 557 O ILE 81 44.714 42.324 -2.297 1.00 0.00 O ATOM 558 CB ILE 81 45.503 40.762 -4.709 1.00 0.00 C ATOM 559 CEN ILE 81 45.756 40.508 -5.738 1.00 0.00 C ATOM 560 H ILE 81 43.468 39.831 -3.026 1.00 0.00 H ATOM 561 N ASN 82 46.719 41.596 -1.579 1.00 0.00 N ATOM 562 CA ASN 82 46.875 42.653 -0.587 1.00 0.00 C ATOM 563 C ASN 82 45.685 42.699 0.361 1.00 0.00 C ATOM 564 O ASN 82 45.295 43.767 0.835 1.00 0.00 O ATOM 565 CB ASN 82 47.073 44.007 -1.246 1.00 0.00 C ATOM 566 CEN ASN 82 47.868 44.616 -1.558 1.00 0.00 C ATOM 567 H ASN 82 47.461 40.921 -1.700 1.00 0.00 H ATOM 568 N GLY 83 45.110 41.533 0.637 1.00 0.00 N ATOM 569 CA GLY 83 43.960 41.438 1.529 1.00 0.00 C ATOM 570 C GLY 83 42.653 41.578 0.758 1.00 0.00 C ATOM 571 O GLY 83 41.579 41.274 1.278 1.00 0.00 O ATOM 572 CEN GLY 83 43.959 41.437 1.529 1.00 0.00 C ATOM 573 H GLY 83 45.479 40.691 0.220 1.00 0.00 H ATOM 574 N LYS 84 42.751 42.041 -0.483 1.00 0.00 N ATOM 575 CA LYS 84 41.580 42.198 -1.337 1.00 0.00 C ATOM 576 C LYS 84 41.099 40.852 -1.865 1.00 0.00 C ATOM 577 O LYS 84 41.868 40.094 -2.453 1.00 0.00 O ATOM 578 CB LYS 84 41.889 43.140 -2.502 1.00 0.00 C ATOM 579 CEN LYS 84 41.692 45.053 -3.384 1.00 0.00 C ATOM 580 H LYS 84 43.660 42.290 -0.845 1.00 0.00 H ATOM 581 N SER 85 39.820 40.562 -1.651 1.00 0.00 N ATOM 582 CA SER 85 39.218 39.334 -2.156 1.00 0.00 C ATOM 583 C SER 85 38.655 39.533 -3.557 1.00 0.00 C ATOM 584 O SER 85 37.775 40.368 -3.771 1.00 0.00 O ATOM 585 CB SER 85 38.131 38.858 -1.212 1.00 0.00 C ATOM 586 CEN SER 85 37.720 38.883 -0.857 1.00 0.00 C ATOM 587 H SER 85 39.249 41.209 -1.124 1.00 0.00 H ATOM 588 N LEU 86 39.165 38.761 -4.510 1.00 0.00 N ATOM 589 CA LEU 86 38.711 38.849 -5.893 1.00 0.00 C ATOM 590 C LEU 86 38.055 37.548 -6.341 1.00 0.00 C ATOM 591 O LEU 86 38.657 36.478 -6.258 1.00 0.00 O ATOM 592 CB LEU 86 39.886 39.199 -6.815 1.00 0.00 C ATOM 593 CEN LEU 86 40.307 40.500 -7.524 1.00 0.00 C ATOM 594 H LEU 86 39.886 38.095 -4.271 1.00 0.00 H ATOM 595 N LYS 87 36.818 37.649 -6.816 1.00 0.00 N ATOM 596 CA LYS 87 36.081 36.482 -7.285 1.00 0.00 C ATOM 597 C LYS 87 36.719 35.895 -8.537 1.00 0.00 C ATOM 598 O LYS 87 37.017 36.615 -9.490 1.00 0.00 O ATOM 599 CB LYS 87 34.621 36.847 -7.560 1.00 0.00 C ATOM 600 CEN LYS 87 32.594 36.783 -6.954 1.00 0.00 C ATOM 601 H LYS 87 36.377 38.557 -6.852 1.00 0.00 H ATOM 602 N LYS 88 36.925 34.582 -8.530 1.00 0.00 N ATOM 603 CA LYS 88 37.509 33.892 -9.674 1.00 0.00 C ATOM 604 C LYS 88 36.459 33.083 -10.424 1.00 0.00 C ATOM 605 O LYS 88 35.803 32.214 -9.849 1.00 0.00 O ATOM 606 CB LYS 88 38.652 32.982 -9.223 1.00 0.00 C ATOM 607 CEN LYS 88 40.732 32.628 -9.070 1.00 0.00 C ATOM 608 H LYS 88 36.670 34.049 -7.711 1.00 0.00 H ATOM 609 N TYR 89 36.304 33.374 -11.712 1.00 0.00 N ATOM 610 CA TYR 89 35.321 32.685 -12.540 1.00 0.00 C ATOM 611 C TYR 89 35.992 31.946 -13.691 1.00 0.00 C ATOM 612 O TYR 89 37.117 32.267 -14.076 1.00 0.00 O ATOM 613 CB TYR 89 34.289 33.676 -13.082 1.00 0.00 C ATOM 614 CEN TYR 89 32.659 34.234 -12.766 1.00 0.00 C ATOM 615 H TYR 89 36.882 34.090 -12.127 1.00 0.00 H ATOM 616 N MET 90 35.296 30.954 -14.236 1.00 0.00 N ATOM 617 CA MET 90 35.771 30.246 -15.419 1.00 0.00 C ATOM 618 C MET 90 35.628 31.101 -16.670 1.00 0.00 C ATOM 619 O MET 90 36.435 31.339 -17.209 1.00 0.00 O ATOM 620 CB MET 90 35.010 28.931 -15.586 1.00 0.00 C ATOM 621 CEN MET 90 35.192 27.191 -15.471 1.00 0.00 C ATOM 622 H MET 90 34.415 30.686 -13.823 1.00 0.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 442 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.11 65.7 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 38.18 71.2 118 100.0 118 ARMSMC SURFACE . . . . . . . . 65.62 57.4 108 100.0 108 ARMSMC BURIED . . . . . . . . 36.91 78.6 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 66 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 44 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 46 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 39 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 33 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 24 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 13 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.57 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.57 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0952 CRMSCA SECONDARY STRUCTURE . . 7.56 59 100.0 59 CRMSCA SURFACE . . . . . . . . 9.62 55 100.0 55 CRMSCA BURIED . . . . . . . . 6.60 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.64 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 7.60 293 100.0 293 CRMSMC SURFACE . . . . . . . . 9.67 269 100.0 269 CRMSMC BURIED . . . . . . . . 6.73 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.95 82 23.0 356 CRMSSC RELIABLE SIDE CHAINS . 8.95 82 25.9 316 CRMSSC SECONDARY STRUCTURE . . 7.80 57 22.6 252 CRMSSC SURFACE . . . . . . . . 10.06 49 24.0 204 CRMSSC BURIED . . . . . . . . 6.96 33 21.7 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.64 442 61.7 716 CRMSALL SECONDARY STRUCTURE . . 7.60 293 60.0 488 CRMSALL SURFACE . . . . . . . . 9.67 269 63.4 424 CRMSALL BURIED . . . . . . . . 6.73 173 59.2 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.664 1.000 0.500 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 6.781 1.000 0.500 59 100.0 59 ERRCA SURFACE . . . . . . . . 8.739 1.000 0.500 55 100.0 55 ERRCA BURIED . . . . . . . . 5.976 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.702 1.000 0.500 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 6.824 1.000 0.500 293 100.0 293 ERRMC SURFACE . . . . . . . . 8.736 1.000 0.500 269 100.0 269 ERRMC BURIED . . . . . . . . 6.093 1.000 0.500 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.946 1.000 0.500 82 23.0 356 ERRSC RELIABLE SIDE CHAINS . 7.946 1.000 0.500 82 25.9 316 ERRSC SECONDARY STRUCTURE . . 6.969 1.000 0.500 57 22.6 252 ERRSC SURFACE . . . . . . . . 9.044 1.000 0.500 49 24.0 204 ERRSC BURIED . . . . . . . . 6.317 1.000 0.500 33 21.7 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.702 1.000 0.500 442 61.7 716 ERRALL SECONDARY STRUCTURE . . 6.824 1.000 0.500 293 60.0 488 ERRALL SURFACE . . . . . . . . 8.736 1.000 0.500 269 63.4 424 ERRALL BURIED . . . . . . . . 6.093 1.000 0.500 173 59.2 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 14 24 68 90 90 DISTCA CA (P) 0.00 2.22 15.56 26.67 75.56 90 DISTCA CA (RMS) 0.00 1.60 2.30 3.05 6.55 DISTCA ALL (N) 0 20 66 121 331 442 716 DISTALL ALL (P) 0.00 2.79 9.22 16.90 46.23 716 DISTALL ALL (RMS) 0.00 1.72 2.27 3.15 6.50 DISTALL END of the results output