####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 716), selected 90 , name T0540TS033_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS033_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 90 1 - 90 4.42 4.42 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 64 - 85 1.97 5.99 LCS_AVERAGE: 19.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 74 - 85 0.98 5.26 LCS_AVERAGE: 8.77 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 5 90 4 4 4 5 6 15 25 29 36 51 60 64 70 72 75 81 85 88 89 90 LCS_GDT T 2 T 2 4 5 90 4 4 4 5 9 11 13 35 44 52 59 61 67 72 77 81 87 88 89 90 LCS_GDT D 3 D 3 4 7 90 4 4 4 7 12 15 21 35 44 56 61 65 71 74 77 81 87 88 89 90 LCS_GDT L 4 L 4 4 21 90 4 4 4 7 30 43 53 55 63 68 73 76 79 81 83 85 87 88 89 90 LCS_GDT V 5 V 5 10 21 90 8 17 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 6 A 6 10 21 90 8 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 7 V 7 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT W 8 W 8 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT D 9 D 9 10 21 90 8 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 10 V 10 10 21 90 8 20 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 11 A 11 10 21 90 6 16 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT L 12 L 12 10 21 90 4 12 20 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT S 13 S 13 10 21 90 3 5 24 42 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT D 14 D 14 10 21 90 3 13 30 40 47 55 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 15 G 15 10 21 90 4 11 31 42 49 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 16 V 16 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT H 17 H 17 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 18 K 18 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 19 I 19 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 20 E 20 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT F 21 F 21 10 21 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 22 E 22 10 21 90 10 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT H 23 H 23 9 21 90 3 17 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 24 G 24 9 21 90 3 8 21 43 49 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT T 25 T 25 4 5 90 3 4 5 5 5 5 6 13 32 59 70 75 75 78 82 84 87 88 89 90 LCS_GDT T 26 T 26 4 5 90 3 4 4 5 5 5 5 6 9 16 42 64 73 78 82 85 87 88 89 90 LCS_GDT S 27 S 27 4 14 90 3 4 4 5 21 42 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 28 G 28 4 14 90 4 7 31 41 49 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 29 K 29 9 14 90 3 10 25 35 44 55 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT R 30 R 30 9 14 90 4 10 25 37 46 55 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 31 V 31 9 14 90 4 11 29 43 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 32 V 32 9 14 90 4 21 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT Y 33 Y 33 9 14 90 6 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 34 V 34 9 14 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT D 35 D 35 9 14 90 4 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 36 G 36 9 14 90 3 14 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 37 K 37 9 14 90 6 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 38 E 38 8 14 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 39 E 39 8 14 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 40 I 40 5 14 90 3 4 5 13 42 51 56 63 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT R 41 R 41 5 14 90 3 4 16 27 37 50 59 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 42 K 42 5 14 90 3 4 5 8 20 30 39 47 56 69 73 77 79 81 83 85 87 88 89 90 LCS_GDT E 43 E 43 5 7 90 3 4 5 7 7 10 19 31 39 47 54 63 77 80 83 85 86 87 89 90 LCS_GDT W 44 W 44 5 6 90 3 4 5 7 20 27 36 41 52 62 73 77 79 81 83 85 87 88 89 90 LCS_GDT M 45 M 45 5 6 90 3 4 12 17 24 33 39 47 56 69 73 77 79 81 83 85 87 88 89 90 LCS_GDT F 46 F 46 5 6 90 3 4 8 17 24 33 41 50 59 69 73 77 79 81 83 85 87 88 89 90 LCS_GDT K 47 K 47 5 6 90 3 4 12 17 26 39 46 56 63 69 74 77 79 81 83 85 87 88 89 90 LCS_GDT L 48 L 48 4 8 90 3 3 5 7 11 14 18 21 34 45 63 71 78 80 83 85 87 88 89 90 LCS_GDT V 49 V 49 5 11 90 3 4 6 7 19 39 49 61 64 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 50 G 50 5 19 90 4 10 30 44 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 51 K 51 5 19 90 3 12 20 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 52 E 52 6 19 90 4 6 17 35 49 55 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT T 53 T 53 6 19 90 4 14 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT F 54 F 54 6 19 90 6 15 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT Y 55 Y 55 6 19 90 4 11 34 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT V 56 V 56 6 19 90 4 11 34 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 57 G 57 6 19 90 1 9 19 31 42 52 57 61 67 69 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 58 A 58 5 19 90 3 3 7 27 42 50 57 61 67 69 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 59 A 59 3 19 90 3 8 23 31 42 52 56 61 67 69 72 77 79 81 83 85 87 88 89 90 LCS_GDT K 60 K 60 5 19 90 3 4 5 12 26 45 59 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT T 61 T 61 8 19 90 5 9 30 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 62 K 62 8 19 90 5 21 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 63 A 63 8 19 90 5 21 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT T 64 T 64 8 22 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 65 I 65 8 22 90 7 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT N 66 N 66 8 22 90 5 16 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 67 I 67 8 22 90 3 18 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT D 68 D 68 8 22 90 9 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 69 A 69 7 22 90 4 8 22 33 45 53 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 70 I 70 7 22 90 4 7 17 23 34 51 56 62 66 70 74 76 79 81 83 85 87 88 89 90 LCS_GDT S 71 S 71 7 22 90 3 6 12 16 25 28 38 49 56 66 70 73 75 80 82 84 87 88 89 90 LCS_GDT G 72 G 72 7 22 90 4 6 14 24 34 51 56 62 66 70 74 76 79 81 83 85 87 88 89 90 LCS_GDT F 73 F 73 8 22 90 4 6 14 33 42 51 59 64 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT A 74 A 74 12 22 90 4 17 34 43 49 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT Y 75 Y 75 12 22 90 4 17 37 46 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 76 E 76 12 22 90 4 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT Y 77 Y 77 12 22 90 4 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT T 78 T 78 12 22 90 5 16 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT L 79 L 79 12 22 90 6 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT E 80 E 80 12 22 90 6 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT I 81 I 81 12 22 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT N 82 N 82 12 22 90 6 15 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT G 83 G 83 12 22 90 6 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 84 K 84 12 22 90 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT S 85 S 85 12 22 90 4 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT L 86 L 86 10 18 90 5 11 25 43 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 87 K 87 9 15 90 3 4 15 26 31 50 54 62 66 69 74 77 79 81 83 85 87 88 89 90 LCS_GDT K 88 K 88 5 15 90 3 4 23 33 48 52 60 65 67 70 74 77 79 81 83 85 87 88 89 90 LCS_GDT Y 89 Y 89 4 14 90 3 3 5 6 23 30 37 46 55 59 66 70 73 79 82 85 86 87 89 90 LCS_GDT M 90 M 90 3 14 90 0 3 4 6 28 40 53 61 65 69 72 77 79 81 83 85 87 88 89 90 LCS_AVERAGE LCS_A: 42.71 ( 8.77 19.36 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 28 38 47 50 56 60 65 67 70 74 77 79 81 83 85 87 88 89 90 GDT PERCENT_AT 12.22 31.11 42.22 52.22 55.56 62.22 66.67 72.22 74.44 77.78 82.22 85.56 87.78 90.00 92.22 94.44 96.67 97.78 98.89 100.00 GDT RMS_LOCAL 0.29 0.67 0.94 1.20 1.32 1.60 1.83 2.15 2.26 2.52 2.84 3.17 3.26 3.42 3.66 3.86 4.11 4.24 4.32 4.42 GDT RMS_ALL_AT 4.70 4.75 4.89 4.90 4.84 4.72 4.62 4.56 4.56 4.54 4.50 4.48 4.46 4.46 4.47 4.46 4.42 4.43 4.42 4.42 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 38 E 38 # possible swapping detected: E 43 E 43 # possible swapping detected: E 52 E 52 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 75 Y 75 # possible swapping detected: Y 77 Y 77 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 10.609 0 0.514 1.107 14.166 2.857 1.429 LGA T 2 T 2 11.020 0 0.118 1.062 15.334 0.357 0.204 LGA D 3 D 3 9.726 0 0.362 1.128 15.096 4.405 2.202 LGA L 4 L 4 5.757 0 0.606 1.322 10.357 35.476 20.298 LGA V 5 V 5 1.553 0 0.686 0.601 6.544 66.905 49.932 LGA A 6 A 6 1.247 0 0.081 0.078 1.576 81.429 79.714 LGA V 7 V 7 0.919 0 0.079 1.103 3.111 88.214 78.639 LGA W 8 W 8 0.835 0 0.124 0.157 1.512 88.214 84.694 LGA D 9 D 9 1.134 0 0.080 0.957 4.041 81.429 68.095 LGA V 10 V 10 1.423 0 0.147 1.077 3.005 75.119 68.639 LGA A 11 A 11 1.606 0 0.052 0.048 1.890 75.000 74.571 LGA L 12 L 12 2.558 0 0.571 0.627 3.803 59.167 55.536 LGA S 13 S 13 2.659 0 0.484 0.689 4.198 52.143 50.317 LGA D 14 D 14 3.206 0 0.614 1.110 7.418 61.190 39.583 LGA G 15 G 15 2.578 0 0.117 0.117 3.016 63.214 63.214 LGA V 16 V 16 1.165 0 0.089 1.161 3.580 75.119 66.667 LGA H 17 H 17 0.537 0 0.124 0.238 0.918 90.476 91.429 LGA K 18 K 18 0.966 0 0.094 0.847 2.896 90.476 74.656 LGA I 19 I 19 0.916 0 0.038 0.134 0.939 90.476 90.476 LGA E 20 E 20 1.058 0 0.037 0.564 3.572 85.952 74.550 LGA F 21 F 21 0.906 0 0.099 0.229 2.071 90.476 81.645 LGA E 22 E 22 1.195 0 0.035 0.683 2.622 79.405 75.926 LGA H 23 H 23 2.522 0 0.631 0.510 5.969 69.048 44.048 LGA G 24 G 24 2.983 0 0.590 0.590 4.367 45.357 45.357 LGA T 25 T 25 8.231 0 0.088 0.091 11.235 7.024 4.014 LGA T 26 T 26 8.968 0 0.150 1.224 12.719 6.190 3.605 LGA S 27 S 27 4.286 0 0.228 0.710 5.384 37.619 44.206 LGA G 28 G 28 2.618 0 0.756 0.756 2.653 62.976 62.976 LGA K 29 K 29 4.004 0 0.090 1.041 11.049 43.452 25.344 LGA R 30 R 30 3.032 0 0.047 1.007 5.692 50.119 42.381 LGA V 31 V 31 2.054 0 0.137 0.203 2.846 68.810 67.143 LGA V 32 V 32 1.057 0 0.173 1.108 3.049 81.429 74.490 LGA Y 33 Y 33 1.438 0 0.097 1.274 8.016 81.429 52.341 LGA V 34 V 34 0.816 0 0.219 1.150 3.635 79.881 72.721 LGA D 35 D 35 1.057 0 0.310 0.920 5.089 88.214 65.179 LGA G 36 G 36 1.446 0 0.232 0.232 1.446 85.952 85.952 LGA K 37 K 37 0.438 0 0.068 0.839 2.433 88.452 82.857 LGA E 38 E 38 1.708 0 0.379 0.648 4.235 67.857 54.762 LGA E 39 E 39 1.605 0 0.644 0.746 4.101 63.452 56.190 LGA I 40 I 40 4.603 0 0.615 0.574 9.396 36.190 21.429 LGA R 41 R 41 4.685 0 0.071 1.115 15.298 25.833 12.338 LGA K 42 K 42 7.571 0 0.144 1.184 8.101 9.762 11.323 LGA E 43 E 43 10.813 0 0.640 1.220 18.396 0.119 0.053 LGA W 44 W 44 8.714 0 0.604 1.449 12.864 4.405 1.497 LGA M 45 M 45 8.744 0 0.113 0.702 10.081 1.429 2.381 LGA F 46 F 46 8.559 0 0.633 0.626 10.202 2.619 4.372 LGA K 47 K 47 8.197 0 0.128 1.296 8.315 5.357 8.466 LGA L 48 L 48 10.218 0 0.112 1.328 16.493 1.786 0.893 LGA V 49 V 49 6.379 0 0.532 1.433 7.706 19.286 16.327 LGA G 50 G 50 2.822 0 0.152 0.152 3.461 57.262 57.262 LGA K 51 K 51 2.958 0 0.034 0.886 14.409 52.143 27.249 LGA E 52 E 52 3.168 0 0.086 1.162 9.233 50.357 27.249 LGA T 53 T 53 2.354 0 0.033 0.089 4.641 57.500 49.728 LGA F 54 F 54 2.357 0 0.070 0.160 2.957 64.762 62.684 LGA Y 55 Y 55 2.935 0 0.030 0.227 4.347 57.143 46.944 LGA V 56 V 56 2.703 0 0.136 0.144 4.768 47.262 53.741 LGA G 57 G 57 5.154 0 0.321 0.321 5.154 48.571 48.571 LGA A 58 A 58 5.131 0 0.663 0.611 6.076 22.738 22.476 LGA A 59 A 59 5.884 0 0.219 0.229 7.322 29.286 25.429 LGA K 60 K 60 4.603 0 0.427 0.823 12.070 40.476 22.698 LGA T 61 T 61 2.057 0 0.092 1.103 2.884 60.952 63.741 LGA K 62 K 62 1.123 0 0.072 0.766 4.862 81.429 63.968 LGA A 63 A 63 0.910 0 0.059 0.098 1.042 92.857 90.571 LGA T 64 T 64 0.525 0 0.092 1.124 2.369 97.619 87.075 LGA I 65 I 65 0.448 0 0.064 0.117 1.178 95.238 95.298 LGA N 66 N 66 1.225 0 0.042 0.663 2.958 83.690 73.333 LGA I 67 I 67 1.208 0 0.122 0.168 1.767 81.429 79.286 LGA D 68 D 68 0.530 0 0.137 0.956 5.309 84.048 64.464 LGA A 69 A 69 4.140 0 0.641 0.617 6.334 35.714 33.810 LGA I 70 I 70 6.096 0 0.190 1.121 7.413 20.714 17.083 LGA S 71 S 71 9.008 0 0.091 0.084 12.107 5.833 3.889 LGA G 72 G 72 6.713 0 0.146 0.146 7.656 19.524 19.524 LGA F 73 F 73 4.776 0 0.027 0.658 5.446 41.190 33.074 LGA A 74 A 74 2.186 0 0.099 0.129 3.117 61.190 58.952 LGA Y 75 Y 75 1.452 0 0.108 0.236 4.097 81.429 65.079 LGA E 76 E 76 0.628 0 0.084 0.758 2.900 88.214 77.196 LGA Y 77 Y 77 0.588 0 0.028 0.097 1.800 90.476 85.992 LGA T 78 T 78 1.222 0 0.065 0.079 2.007 88.214 80.476 LGA L 79 L 79 0.877 0 0.094 0.187 0.996 90.476 90.476 LGA E 80 E 80 0.827 0 0.069 0.212 2.001 90.476 85.608 LGA I 81 I 81 0.724 0 0.032 0.633 1.555 85.952 87.202 LGA N 82 N 82 2.136 0 0.035 0.837 3.656 66.786 60.298 LGA G 83 G 83 1.616 0 0.133 0.133 1.798 77.143 77.143 LGA K 84 K 84 1.222 0 0.101 0.703 4.376 88.333 68.307 LGA S 85 S 85 0.603 0 0.087 0.131 2.631 79.643 74.762 LGA L 86 L 86 2.952 0 0.088 1.390 8.141 61.190 42.262 LGA K 87 K 87 5.426 0 0.073 0.725 12.130 28.810 14.444 LGA K 88 K 88 4.100 0 0.038 1.213 7.746 24.643 31.905 LGA Y 89 Y 89 8.884 0 0.230 0.923 15.768 7.500 2.500 LGA M 90 M 90 6.814 0 0.132 1.098 9.858 6.429 14.821 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 360 100.00 716 716 100.00 90 SUMMARY(RMSD_GDC): 4.420 4.316 5.465 55.735 49.351 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 65 2.15 62.500 53.743 2.886 LGA_LOCAL RMSD: 2.152 Number of atoms: 65 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.562 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 4.420 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.384018 * X + 0.871136 * Y + -0.306027 * Z + 39.146912 Y_new = 0.868987 * X + 0.453014 * Y + 0.199101 * Z + -60.717789 Z_new = 0.312078 * X + -0.189475 * Y + -0.930971 * Z + 38.651417 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.986906 -0.317380 -2.940810 [DEG: 113.8413 -18.1845 -168.4960 ] ZXZ: -2.147591 2.767859 2.116450 [DEG: -123.0479 158.5866 121.2637 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS033_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS033_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 65 2.15 53.743 4.42 REMARK ---------------------------------------------------------- MOLECULE T0540TS033_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 28.840 6.537 5.717 1.00 6.62 N ATOM 2 CA MET 1 28.498 6.356 4.292 1.00 6.62 C ATOM 3 C MET 1 28.615 7.644 3.557 1.00 6.62 C ATOM 4 O MET 1 29.459 8.485 3.861 1.00 6.62 O ATOM 5 CB MET 1 27.063 5.848 4.146 1.00 6.62 C ATOM 6 CG MET 1 26.839 4.451 4.703 1.00 6.62 C ATOM 7 SD MET 1 27.829 3.201 3.864 1.00 6.62 S ATOM 8 CE MET 1 27.037 3.163 2.258 1.00 6.62 C ATOM 9 N THR 2 27.741 7.806 2.550 1.00 6.10 N ATOM 10 CA THR 2 27.707 8.955 1.696 1.00 6.10 C ATOM 11 C THR 2 27.350 10.155 2.504 1.00 6.10 C ATOM 12 O THR 2 27.951 11.221 2.366 1.00 6.10 O ATOM 13 CB THR 2 26.666 8.792 0.573 1.00 6.10 C ATOM 14 OG1 THR 2 27.014 7.669 -0.246 1.00 6.10 O ATOM 15 CG2 THR 2 26.621 10.040 -0.296 1.00 6.10 C ATOM 16 N ASP 3 26.368 10.007 3.400 1.00 6.50 N ATOM 17 CA ASP 3 25.890 11.151 4.108 1.00 6.50 C ATOM 18 C ASP 3 27.016 11.726 4.916 1.00 6.50 C ATOM 19 O ASP 3 27.214 12.940 4.937 1.00 6.50 O ATOM 20 CB ASP 3 24.744 10.762 5.044 1.00 6.50 C ATOM 21 CG ASP 3 23.460 10.456 4.297 1.00 6.50 C ATOM 22 OD1 ASP 3 23.385 10.770 3.091 1.00 6.50 O ATOM 23 OD2 ASP 3 22.529 9.903 4.919 1.00 6.50 O ATOM 24 N LEU 4 27.800 10.863 5.588 1.00 5.66 N ATOM 25 CA LEU 4 28.855 11.328 6.444 1.00 5.66 C ATOM 26 C LEU 4 29.991 11.977 5.702 1.00 5.66 C ATOM 27 O LEU 4 30.472 13.029 6.122 1.00 5.66 O ATOM 28 CB LEU 4 29.454 10.165 7.238 1.00 5.66 C ATOM 29 CG LEU 4 28.555 9.541 8.308 1.00 5.66 C ATOM 30 CD1 LEU 4 29.199 8.293 8.890 1.00 5.66 C ATOM 31 CD2 LEU 4 28.308 10.524 9.442 1.00 5.66 C ATOM 32 N VAL 5 30.453 11.402 4.575 1.00 4.56 N ATOM 33 CA VAL 5 31.619 11.979 3.960 1.00 4.56 C ATOM 34 C VAL 5 31.272 12.543 2.619 1.00 4.56 C ATOM 35 O VAL 5 30.361 12.068 1.943 1.00 4.56 O ATOM 36 CB VAL 5 32.731 10.931 3.764 1.00 4.56 C ATOM 37 CG1 VAL 5 33.196 10.391 5.107 1.00 4.56 C ATOM 38 CG2 VAL 5 32.223 9.767 2.927 1.00 4.56 C ATOM 39 N ALA 6 32.004 13.605 2.218 1.00 2.85 N ATOM 40 CA ALA 6 31.775 14.238 0.948 1.00 2.85 C ATOM 41 C ALA 6 33.092 14.329 0.245 1.00 2.85 C ATOM 42 O ALA 6 34.144 14.383 0.877 1.00 2.85 O ATOM 43 CB ALA 6 31.194 15.629 1.146 1.00 2.85 C ATOM 44 N VAL 7 33.069 14.327 -1.104 1.00 2.36 N ATOM 45 CA VAL 7 34.289 14.398 -1.863 1.00 2.36 C ATOM 46 C VAL 7 34.085 15.428 -2.923 1.00 2.36 C ATOM 47 O VAL 7 32.954 15.744 -3.281 1.00 2.36 O ATOM 48 CB VAL 7 34.630 13.045 -2.513 1.00 2.36 C ATOM 49 CG1 VAL 7 34.854 11.983 -1.446 1.00 2.36 C ATOM 50 CG2 VAL 7 33.495 12.587 -3.416 1.00 2.36 C ATOM 51 N TRP 8 35.184 16.023 -3.432 1.00 2.14 N ATOM 52 CA TRP 8 35.044 16.996 -4.475 1.00 2.14 C ATOM 53 C TRP 8 36.168 16.766 -5.429 1.00 2.14 C ATOM 54 O TRP 8 37.166 16.134 -5.087 1.00 2.14 O ATOM 55 CB TRP 8 35.116 18.413 -3.900 1.00 2.14 C ATOM 56 CG TRP 8 34.026 18.717 -2.918 1.00 2.14 C ATOM 57 CD1 TRP 8 32.817 19.291 -3.188 1.00 2.14 C ATOM 58 CD2 TRP 8 34.044 18.462 -1.508 1.00 2.14 C ATOM 59 NE1 TRP 8 32.080 19.410 -2.034 1.00 2.14 N ATOM 60 CE2 TRP 8 32.814 18.908 -0.988 1.00 2.14 C ATOM 61 CE3 TRP 8 34.982 17.901 -0.635 1.00 2.14 C ATOM 62 CZ2 TRP 8 32.496 18.811 0.366 1.00 2.14 C ATOM 63 CZ3 TRP 8 34.662 17.807 0.706 1.00 2.14 C ATOM 64 CH2 TRP 8 33.433 18.258 1.197 1.00 2.14 H ATOM 65 N ASP 9 36.015 17.261 -6.668 1.00 1.86 N ATOM 66 CA ASP 9 37.047 17.080 -7.639 1.00 1.86 C ATOM 67 C ASP 9 37.402 18.438 -8.152 1.00 1.86 C ATOM 68 O ASP 9 36.621 19.039 -8.890 1.00 1.86 O ATOM 69 CB ASP 9 36.556 16.191 -8.784 1.00 1.86 C ATOM 70 CG ASP 9 37.634 15.917 -9.813 1.00 1.86 C ATOM 71 OD1 ASP 9 38.724 16.521 -9.707 1.00 1.86 O ATOM 72 OD2 ASP 9 37.391 15.101 -10.725 1.00 1.86 O ATOM 73 N VAL 10 38.578 18.970 -7.764 1.00 2.74 N ATOM 74 CA VAL 10 38.924 20.283 -8.241 1.00 2.74 C ATOM 75 C VAL 10 40.240 20.207 -8.938 1.00 2.74 C ATOM 76 O VAL 10 41.190 19.590 -8.456 1.00 2.74 O ATOM 77 CB VAL 10 39.030 21.294 -7.084 1.00 2.74 C ATOM 78 CG1 VAL 10 39.439 22.662 -7.608 1.00 2.74 C ATOM 79 CG2 VAL 10 37.694 21.432 -6.372 1.00 2.74 C ATOM 80 N ALA 11 40.326 20.844 -10.122 1.00 3.91 N ATOM 81 CA ALA 11 41.570 20.835 -10.826 1.00 3.91 C ATOM 82 C ALA 11 42.264 22.105 -10.466 1.00 3.91 C ATOM 83 O ALA 11 41.801 23.200 -10.777 1.00 3.91 O ATOM 84 CB ALA 11 41.329 20.763 -12.326 1.00 3.91 C ATOM 85 N LEU 12 43.368 21.971 -9.716 1.00 4.90 N ATOM 86 CA LEU 12 44.174 23.086 -9.339 1.00 4.90 C ATOM 87 C LEU 12 44.953 23.556 -10.530 1.00 4.90 C ATOM 88 O LEU 12 45.038 24.755 -10.789 1.00 4.90 O ATOM 89 CB LEU 12 45.149 22.692 -8.229 1.00 4.90 C ATOM 90 CG LEU 12 44.532 22.388 -6.861 1.00 4.90 C ATOM 91 CD1 LEU 12 45.582 21.841 -5.907 1.00 4.90 C ATOM 92 CD2 LEU 12 43.942 23.648 -6.246 1.00 4.90 C ATOM 93 N SER 13 45.530 22.601 -11.293 1.00 6.12 N ATOM 94 CA SER 13 46.341 22.877 -12.450 1.00 6.12 C ATOM 95 C SER 13 46.422 21.590 -13.218 1.00 6.12 C ATOM 96 O SER 13 45.397 20.969 -13.483 1.00 6.12 O ATOM 97 CB SER 13 47.736 23.342 -12.028 1.00 6.12 C ATOM 98 OG SER 13 48.534 23.654 -13.157 1.00 6.12 O ATOM 99 N ASP 14 47.630 21.165 -13.646 1.00 6.89 N ATOM 100 CA ASP 14 47.693 19.906 -14.343 1.00 6.89 C ATOM 101 C ASP 14 47.209 18.849 -13.402 1.00 6.89 C ATOM 102 O ASP 14 47.550 18.846 -12.220 1.00 6.89 O ATOM 103 CB ASP 14 49.129 19.604 -14.775 1.00 6.89 C ATOM 104 CG ASP 14 49.586 20.475 -15.929 1.00 6.89 C ATOM 105 OD1 ASP 14 48.734 21.170 -16.521 1.00 6.89 O ATOM 106 OD2 ASP 14 50.795 20.460 -16.243 1.00 6.89 O ATOM 107 N GLY 15 46.361 17.933 -13.914 1.00 5.67 N ATOM 108 CA GLY 15 45.859 16.849 -13.122 1.00 5.67 C ATOM 109 C GLY 15 44.719 17.371 -12.319 1.00 5.67 C ATOM 110 O GLY 15 44.548 18.581 -12.180 1.00 5.67 O ATOM 111 N VAL 16 43.907 16.457 -11.755 1.00 3.92 N ATOM 112 CA VAL 16 42.800 16.875 -10.950 1.00 3.92 C ATOM 113 C VAL 16 43.078 16.484 -9.545 1.00 3.92 C ATOM 114 O VAL 16 43.455 15.350 -9.262 1.00 3.92 O ATOM 115 CB VAL 16 41.487 16.213 -11.408 1.00 3.92 C ATOM 116 CG1 VAL 16 40.336 16.634 -10.507 1.00 3.92 C ATOM 117 CG2 VAL 16 41.155 16.621 -12.835 1.00 3.92 C ATOM 118 N HIS 17 42.876 17.433 -8.615 1.00 3.10 N ATOM 119 CA HIS 17 43.134 17.140 -7.243 1.00 3.10 C ATOM 120 C HIS 17 41.837 16.754 -6.634 1.00 3.10 C ATOM 121 O HIS 17 40.859 17.500 -6.683 1.00 3.10 O ATOM 122 CB HIS 17 43.711 18.366 -6.533 1.00 3.10 C ATOM 123 CG HIS 17 45.064 18.771 -7.027 1.00 3.10 C ATOM 124 ND1 HIS 17 45.251 19.444 -8.215 1.00 3.10 N ATOM 125 CD2 HIS 17 46.430 18.636 -6.542 1.00 3.10 C ATOM 126 CE1 HIS 17 46.566 19.668 -8.388 1.00 3.10 C ATOM 127 NE2 HIS 17 47.279 19.186 -7.389 1.00 3.10 N ATOM 128 N LYS 18 41.790 15.544 -6.063 1.00 2.69 N ATOM 129 CA LYS 18 40.575 15.149 -5.435 1.00 2.69 C ATOM 130 C LYS 18 40.715 15.521 -4.000 1.00 2.69 C ATOM 131 O LYS 18 41.801 15.437 -3.433 1.00 2.69 O ATOM 132 CB LYS 18 40.361 13.641 -5.584 1.00 2.69 C ATOM 133 CG LYS 18 40.116 13.187 -7.014 1.00 2.69 C ATOM 134 CD LYS 18 39.950 11.678 -7.093 1.00 2.69 C ATOM 135 CE LYS 18 39.747 11.220 -8.528 1.00 2.69 C ATOM 136 NZ LYS 18 39.586 9.743 -8.621 1.00 2.69 N ATOM 137 N ILE 19 39.613 15.997 -3.393 1.00 2.90 N ATOM 138 CA ILE 19 39.626 16.392 -2.017 1.00 2.90 C ATOM 139 C ILE 19 38.514 15.668 -1.327 1.00 2.90 C ATOM 140 O ILE 19 37.431 15.500 -1.885 1.00 2.90 O ATOM 141 CB ILE 19 39.421 17.911 -1.864 1.00 2.90 C ATOM 142 CG1 ILE 19 40.549 18.674 -2.560 1.00 2.90 C ATOM 143 CG2 ILE 19 39.409 18.301 -0.393 1.00 2.90 C ATOM 144 CD1 ILE 19 40.309 20.165 -2.655 1.00 2.90 C ATOM 145 N GLU 20 38.761 15.186 -0.093 1.00 1.81 N ATOM 146 CA GLU 20 37.707 14.521 0.620 1.00 1.81 C ATOM 147 C GLU 20 37.642 15.097 1.991 1.00 1.81 C ATOM 148 O GLU 20 38.656 15.492 2.561 1.00 1.81 O ATOM 149 CB GLU 20 37.984 13.018 0.706 1.00 1.81 C ATOM 150 CG GLU 20 37.999 12.312 -0.640 1.00 1.81 C ATOM 151 CD GLU 20 38.263 10.825 -0.516 1.00 1.81 C ATOM 152 OE1 GLU 20 38.486 10.355 0.620 1.00 1.81 O ATOM 153 OE2 GLU 20 38.248 10.129 -1.552 1.00 1.81 O ATOM 154 N PHE 21 36.423 15.169 2.555 1.00 2.55 N ATOM 155 CA PHE 21 36.286 15.688 3.880 1.00 2.55 C ATOM 156 C PHE 21 35.848 14.523 4.703 1.00 2.55 C ATOM 157 O PHE 21 34.996 13.743 4.285 1.00 2.55 O ATOM 158 CB PHE 21 35.248 16.812 3.912 1.00 2.55 C ATOM 159 CG PHE 21 34.988 17.359 5.286 1.00 2.55 C ATOM 160 CD1 PHE 21 35.855 18.274 5.858 1.00 2.55 C ATOM 161 CD2 PHE 21 33.878 16.958 6.008 1.00 2.55 C ATOM 162 CE1 PHE 21 35.615 18.778 7.122 1.00 2.55 C ATOM 163 CE2 PHE 21 33.638 17.461 7.273 1.00 2.55 C ATOM 164 CZ PHE 21 34.501 18.367 7.830 1.00 2.55 C ATOM 165 N GLU 22 36.429 14.355 5.903 1.00 2.82 N ATOM 166 CA GLU 22 36.008 13.235 6.688 1.00 2.82 C ATOM 167 C GLU 22 35.152 13.771 7.783 1.00 2.82 C ATOM 168 O GLU 22 35.515 14.739 8.452 1.00 2.82 O ATOM 169 CB GLU 22 37.219 12.503 7.271 1.00 2.82 C ATOM 170 CG GLU 22 38.104 11.840 6.229 1.00 2.82 C ATOM 171 CD GLU 22 39.268 11.089 6.846 1.00 2.82 C ATOM 172 OE1 GLU 22 39.381 11.087 8.090 1.00 2.82 O ATOM 173 OE2 GLU 22 40.066 10.502 6.085 1.00 2.82 O ATOM 174 N HIS 23 33.974 13.158 7.981 1.00 4.25 N ATOM 175 CA HIS 23 33.039 13.632 8.957 1.00 4.25 C ATOM 176 C HIS 23 33.608 13.413 10.326 1.00 4.25 C ATOM 177 O HIS 23 33.346 14.190 11.240 1.00 4.25 O ATOM 178 CB HIS 23 31.712 12.880 8.838 1.00 4.25 C ATOM 179 CG HIS 23 30.629 13.422 9.717 1.00 4.25 C ATOM 180 ND1 HIS 23 30.089 14.678 9.546 1.00 4.25 N ATOM 181 CD2 HIS 23 29.878 12.930 10.864 1.00 4.25 C ATOM 182 CE1 HIS 23 29.144 14.879 10.481 1.00 4.25 C ATOM 183 NE2 HIS 23 29.012 13.835 11.276 1.00 4.25 N ATOM 184 N GLY 24 34.407 12.350 10.521 1.00 6.30 N ATOM 185 CA GLY 24 34.937 12.151 11.836 1.00 6.30 C ATOM 186 C GLY 24 35.752 13.340 12.245 1.00 6.30 C ATOM 187 O GLY 24 35.644 13.818 13.373 1.00 6.30 O ATOM 188 N THR 25 36.602 13.837 11.334 1.00 7.23 N ATOM 189 CA THR 25 37.473 14.947 11.587 1.00 7.23 C ATOM 190 C THR 25 36.682 16.211 11.614 1.00 7.23 C ATOM 191 O THR 25 37.094 17.195 12.224 1.00 7.23 O ATOM 192 CB THR 25 38.554 15.075 10.498 1.00 7.23 C ATOM 193 OG1 THR 25 37.931 15.269 9.222 1.00 7.23 O ATOM 194 CG2 THR 25 39.407 13.817 10.444 1.00 7.23 C ATOM 195 N THR 26 35.533 16.219 10.913 1.00 6.92 N ATOM 196 CA THR 26 34.720 17.392 10.762 1.00 6.92 C ATOM 197 C THR 26 34.160 17.768 12.099 1.00 6.92 C ATOM 198 O THR 26 33.745 18.908 12.301 1.00 6.92 O ATOM 199 CB THR 26 33.553 17.149 9.786 1.00 6.92 C ATOM 200 OG1 THR 26 32.721 16.095 10.286 1.00 6.92 O ATOM 201 CG2 THR 26 34.080 16.753 8.415 1.00 6.92 C ATOM 202 N SER 27 34.155 16.807 13.045 1.00 5.44 N ATOM 203 CA SER 27 33.481 16.916 14.310 1.00 5.44 C ATOM 204 C SER 27 33.696 18.246 14.962 1.00 5.44 C ATOM 205 O SER 27 32.714 18.913 15.278 1.00 5.44 O ATOM 206 CB SER 27 33.986 15.846 15.279 1.00 5.44 C ATOM 207 OG SER 27 33.619 14.549 14.844 1.00 5.44 O ATOM 208 N GLY 28 34.937 18.728 15.166 1.00 4.83 N ATOM 209 CA GLY 28 36.174 18.128 14.783 1.00 4.83 C ATOM 210 C GLY 28 36.986 19.291 14.318 1.00 4.83 C ATOM 211 O GLY 28 36.580 20.440 14.488 1.00 4.83 O ATOM 212 N LYS 29 38.169 19.040 13.739 1.00 4.90 N ATOM 213 CA LYS 29 38.919 20.132 13.203 1.00 4.90 C ATOM 214 C LYS 29 38.659 20.051 11.733 1.00 4.90 C ATOM 215 O LYS 29 38.585 18.955 11.179 1.00 4.90 O ATOM 216 CB LYS 29 40.406 19.973 13.527 1.00 4.90 C ATOM 217 CG LYS 29 40.731 20.066 15.010 1.00 4.90 C ATOM 218 CD LYS 29 42.215 19.860 15.264 1.00 4.90 C ATOM 219 CE LYS 29 42.533 19.905 16.749 1.00 4.90 C ATOM 220 NZ LYS 29 43.978 19.667 17.016 1.00 4.90 N ATOM 221 N ARG 30 38.476 21.193 11.046 1.00 4.45 N ATOM 222 CA ARG 30 38.202 21.032 9.649 1.00 4.45 C ATOM 223 C ARG 30 39.430 20.438 9.047 1.00 4.45 C ATOM 224 O ARG 30 40.542 20.923 9.256 1.00 4.45 O ATOM 225 CB ARG 30 37.888 22.383 9.005 1.00 4.45 C ATOM 226 CG ARG 30 36.565 22.989 9.446 1.00 4.45 C ATOM 227 CD ARG 30 36.346 24.355 8.817 1.00 4.45 C ATOM 228 NE ARG 30 36.245 24.277 7.362 1.00 4.45 N ATOM 229 CZ ARG 30 35.116 24.040 6.703 1.00 4.45 C ATOM 230 NH1 ARG 30 35.119 23.987 5.378 1.00 4.45 H ATOM 231 NH2 ARG 30 33.985 23.856 7.371 1.00 4.45 H ATOM 232 N VAL 31 39.261 19.339 8.293 1.00 3.34 N ATOM 233 CA VAL 31 40.400 18.722 7.689 1.00 3.34 C ATOM 234 C VAL 31 40.014 18.424 6.290 1.00 3.34 C ATOM 235 O VAL 31 38.839 18.257 5.979 1.00 3.34 O ATOM 236 CB VAL 31 40.793 17.424 8.419 1.00 3.34 C ATOM 237 CG1 VAL 31 41.949 16.741 7.707 1.00 3.34 C ATOM 238 CG2 VAL 31 41.218 17.724 9.848 1.00 3.34 C ATOM 239 N VAL 32 41.004 18.373 5.392 1.00 4.90 N ATOM 240 CA VAL 32 40.672 18.076 4.045 1.00 4.90 C ATOM 241 C VAL 32 41.573 16.976 3.627 1.00 4.90 C ATOM 242 O VAL 32 42.585 16.708 4.271 1.00 4.90 O ATOM 243 CB VAL 32 40.871 19.300 3.131 1.00 4.90 C ATOM 244 CG1 VAL 32 39.953 20.436 3.555 1.00 4.90 C ATOM 245 CG2 VAL 32 42.309 19.790 3.204 1.00 4.90 C ATOM 246 N TYR 33 41.195 16.264 2.559 1.00 4.53 N ATOM 247 CA TYR 33 42.113 15.291 2.083 1.00 4.53 C ATOM 248 C TYR 33 42.586 15.762 0.756 1.00 4.53 C ATOM 249 O TYR 33 41.810 15.896 -0.188 1.00 4.53 O ATOM 250 CB TYR 33 41.429 13.929 1.951 1.00 4.53 C ATOM 251 CG TYR 33 42.339 12.833 1.445 1.00 4.53 C ATOM 252 CD1 TYR 33 43.275 12.242 2.284 1.00 4.53 C ATOM 253 CD2 TYR 33 42.260 12.392 0.130 1.00 4.53 C ATOM 254 CE1 TYR 33 44.112 11.239 1.831 1.00 4.53 C ATOM 255 CE2 TYR 33 43.089 11.391 -0.341 1.00 4.53 C ATOM 256 CZ TYR 33 44.019 10.815 0.523 1.00 4.53 C ATOM 257 OH TYR 33 44.850 9.817 0.069 1.00 4.53 H ATOM 258 N VAL 34 43.895 16.051 0.682 1.00 5.54 N ATOM 259 CA VAL 34 44.529 16.397 -0.549 1.00 5.54 C ATOM 260 C VAL 34 45.141 15.098 -0.890 1.00 5.54 C ATOM 261 O VAL 34 45.289 14.274 0.010 1.00 5.54 O ATOM 262 CB VAL 34 45.560 17.524 -0.356 1.00 5.54 C ATOM 263 CG1 VAL 34 44.882 18.782 0.165 1.00 5.54 C ATOM 264 CG2 VAL 34 46.628 17.104 0.643 1.00 5.54 C ATOM 265 N ASP 35 45.491 14.883 -2.171 1.00 4.51 N ATOM 266 CA ASP 35 45.940 13.595 -2.617 1.00 4.51 C ATOM 267 C ASP 35 46.989 13.025 -1.714 1.00 4.51 C ATOM 268 O ASP 35 48.163 13.379 -1.771 1.00 4.51 O ATOM 269 CB ASP 35 46.541 13.694 -4.021 1.00 4.51 C ATOM 270 CG ASP 35 46.988 12.349 -4.558 1.00 4.51 C ATOM 271 OD1 ASP 35 46.920 11.355 -3.806 1.00 4.51 O ATOM 272 OD2 ASP 35 47.407 12.289 -5.734 1.00 4.51 O ATOM 273 N GLY 36 46.534 12.130 -0.815 1.00 6.42 N ATOM 274 CA GLY 36 47.361 11.362 0.071 1.00 6.42 C ATOM 275 C GLY 36 47.562 12.072 1.372 1.00 6.42 C ATOM 276 O GLY 36 47.501 11.464 2.441 1.00 6.42 O ATOM 277 N LYS 37 47.780 13.393 1.327 1.00 8.54 N ATOM 278 CA LYS 37 48.088 14.091 2.539 1.00 8.54 C ATOM 279 C LYS 37 46.809 14.447 3.218 1.00 8.54 C ATOM 280 O LYS 37 45.820 14.772 2.564 1.00 8.54 O ATOM 281 CB LYS 37 48.878 15.366 2.237 1.00 8.54 C ATOM 282 CG LYS 37 50.277 15.117 1.698 1.00 8.54 C ATOM 283 CD LYS 37 51.018 16.423 1.462 1.00 8.54 C ATOM 284 CE LYS 37 52.396 16.177 0.869 1.00 8.54 C ATOM 285 NZ LYS 37 53.133 17.448 0.631 1.00 8.54 N ATOM 286 N GLU 38 46.782 14.388 4.567 1.00 9.58 N ATOM 287 CA GLU 38 45.543 14.692 5.219 1.00 9.58 C ATOM 288 C GLU 38 45.506 16.151 5.438 1.00 9.58 C ATOM 289 O GLU 38 45.102 16.589 6.512 1.00 9.58 O ATOM 290 CB GLU 38 45.449 13.958 6.559 1.00 9.58 C ATOM 291 CG GLU 38 45.393 12.444 6.435 1.00 9.58 C ATOM 292 CD GLU 38 45.539 11.744 7.772 1.00 9.58 C ATOM 293 OE1 GLU 38 45.757 12.440 8.786 1.00 9.58 O ATOM 294 OE2 GLU 38 45.437 10.501 7.805 1.00 9.58 O ATOM 295 N GLU 39 45.865 16.933 4.399 1.00 11.10 N ATOM 296 CA GLU 39 45.991 18.363 4.443 1.00 11.10 C ATOM 297 C GLU 39 46.989 18.707 5.501 1.00 11.10 C ATOM 298 O GLU 39 47.158 18.028 6.506 1.00 11.10 O ATOM 299 CB GLU 39 44.644 19.009 4.774 1.00 11.10 C ATOM 300 CG GLU 39 44.675 20.529 4.800 1.00 11.10 C ATOM 301 CD GLU 39 44.904 21.131 3.428 1.00 11.10 C ATOM 302 OE1 GLU 39 44.867 20.376 2.435 1.00 11.10 O ATOM 303 OE2 GLU 39 45.121 22.358 3.347 1.00 11.10 O ATOM 304 N ILE 40 47.754 19.771 5.298 1.00 10.65 N ATOM 305 CA ILE 40 48.621 20.074 6.384 1.00 10.65 C ATOM 306 C ILE 40 47.771 20.473 7.544 1.00 10.65 C ATOM 307 O ILE 40 48.020 20.045 8.670 1.00 10.65 O ATOM 308 CB ILE 40 49.582 21.225 6.035 1.00 10.65 C ATOM 309 CG1 ILE 40 50.571 20.785 4.953 1.00 10.65 C ATOM 310 CG2 ILE 40 50.372 21.652 7.263 1.00 10.65 C ATOM 311 CD1 ILE 40 51.377 21.921 4.363 1.00 10.65 C ATOM 312 N ARG 41 46.742 21.308 7.290 1.00 11.67 N ATOM 313 CA ARG 41 45.858 21.718 8.339 1.00 11.67 C ATOM 314 C ARG 41 45.075 22.883 7.842 1.00 11.67 C ATOM 315 O ARG 41 45.615 23.742 7.145 1.00 11.67 O ATOM 316 CB ARG 41 46.653 22.119 9.584 1.00 11.67 C ATOM 317 CG ARG 41 47.505 23.365 9.400 1.00 11.67 C ATOM 318 CD ARG 41 48.313 23.670 10.651 1.00 11.67 C ATOM 319 NE ARG 41 49.120 24.879 10.500 1.00 11.67 N ATOM 320 CZ ARG 41 49.956 25.339 11.425 1.00 11.67 C ATOM 321 NH1 ARG 41 50.649 26.446 11.200 1.00 11.67 H ATOM 322 NH2 ARG 41 50.097 24.690 12.573 1.00 11.67 H ATOM 323 N LYS 42 43.776 22.935 8.199 1.00 10.66 N ATOM 324 CA LYS 42 42.954 24.042 7.835 1.00 10.66 C ATOM 325 C LYS 42 42.200 24.384 9.069 1.00 10.66 C ATOM 326 O LYS 42 41.908 23.517 9.890 1.00 10.66 O ATOM 327 CB LYS 42 42.008 23.655 6.697 1.00 10.66 C ATOM 328 CG LYS 42 40.974 22.608 7.078 1.00 10.66 C ATOM 329 CD LYS 42 40.056 22.288 5.910 1.00 10.66 C ATOM 330 CE LYS 42 39.107 23.441 5.622 1.00 10.66 C ATOM 331 NZ LYS 42 38.172 23.688 6.753 1.00 10.66 N ATOM 332 N GLU 43 41.876 25.673 9.243 1.00 10.07 N ATOM 333 CA GLU 43 41.306 26.093 10.482 1.00 10.07 C ATOM 334 C GLU 43 39.923 25.545 10.658 1.00 10.07 C ATOM 335 O GLU 43 39.099 25.543 9.745 1.00 10.07 O ATOM 336 CB GLU 43 41.223 27.619 10.544 1.00 10.07 C ATOM 337 CG GLU 43 42.573 28.312 10.620 1.00 10.07 C ATOM 338 CD GLU 43 42.449 29.818 10.745 1.00 10.07 C ATOM 339 OE1 GLU 43 41.313 30.330 10.657 1.00 10.07 O ATOM 340 OE2 GLU 43 43.487 30.487 10.932 1.00 10.07 O ATOM 341 N TRP 44 39.685 25.026 11.878 1.00 9.54 N ATOM 342 CA TRP 44 38.485 24.446 12.416 1.00 9.54 C ATOM 343 C TRP 44 37.488 25.502 12.806 1.00 9.54 C ATOM 344 O TRP 44 36.420 25.191 13.331 1.00 9.54 O ATOM 345 CB TRP 44 38.803 23.617 13.662 1.00 9.54 C ATOM 346 CG TRP 44 39.508 24.390 14.734 1.00 9.54 C ATOM 347 CD1 TRP 44 38.931 25.090 15.753 1.00 9.54 C ATOM 348 CD2 TRP 44 40.924 24.543 14.892 1.00 9.54 C ATOM 349 NE1 TRP 44 39.898 25.670 16.539 1.00 9.54 N ATOM 350 CE2 TRP 44 41.131 25.348 16.029 1.00 9.54 C ATOM 351 CE3 TRP 44 42.035 24.078 14.183 1.00 9.54 C ATOM 352 CZ2 TRP 44 42.406 25.697 16.475 1.00 9.54 C ATOM 353 CZ3 TRP 44 43.298 24.426 14.628 1.00 9.54 C ATOM 354 CH2 TRP 44 43.475 25.228 15.762 1.00 9.54 H ATOM 355 N MET 45 37.869 26.781 12.627 1.00 8.13 N ATOM 356 CA MET 45 37.131 27.962 12.991 1.00 8.13 C ATOM 357 C MET 45 35.647 27.780 12.897 1.00 8.13 C ATOM 358 O MET 45 35.104 27.286 11.907 1.00 8.13 O ATOM 359 CB MET 45 37.500 29.129 12.073 1.00 8.13 C ATOM 360 CG MET 45 38.909 29.659 12.279 1.00 8.13 C ATOM 361 SD MET 45 39.127 30.454 13.882 1.00 8.13 S ATOM 362 CE MET 45 38.441 32.075 13.552 1.00 8.13 C ATOM 363 N PHE 46 34.963 28.214 13.980 1.00 9.09 N ATOM 364 CA PHE 46 33.538 28.141 14.145 1.00 9.09 C ATOM 365 C PHE 46 32.985 29.521 13.985 1.00 9.09 C ATOM 366 O PHE 46 33.533 30.495 14.492 1.00 9.09 O ATOM 367 CB PHE 46 33.186 27.600 15.533 1.00 9.09 C ATOM 368 CG PHE 46 33.586 26.168 15.744 1.00 9.09 C ATOM 369 CD1 PHE 46 34.816 25.851 16.293 1.00 9.09 C ATOM 370 CD2 PHE 46 32.731 25.137 15.394 1.00 9.09 C ATOM 371 CE1 PHE 46 35.184 24.534 16.488 1.00 9.09 C ATOM 372 CE2 PHE 46 33.099 23.819 15.590 1.00 9.09 C ATOM 373 CZ PHE 46 34.319 23.515 16.133 1.00 9.09 C ATOM 374 N LYS 47 31.859 29.649 13.269 1.00 9.51 N ATOM 375 CA LYS 47 31.312 30.961 13.096 1.00 9.51 C ATOM 376 C LYS 47 29.919 30.910 13.616 1.00 9.51 C ATOM 377 O LYS 47 29.443 29.865 14.059 1.00 9.51 O ATOM 378 CB LYS 47 31.318 31.353 11.618 1.00 9.51 C ATOM 379 CG LYS 47 32.702 31.393 10.991 1.00 9.51 C ATOM 380 CD LYS 47 33.523 32.548 11.539 1.00 9.51 C ATOM 381 CE LYS 47 34.862 32.660 10.827 1.00 9.51 C ATOM 382 NZ LYS 47 35.700 33.754 11.390 1.00 9.51 N ATOM 383 N LEU 48 29.235 32.066 13.628 1.00 11.21 N ATOM 384 CA LEU 48 27.850 32.001 13.953 1.00 11.21 C ATOM 385 C LEU 48 27.283 31.157 12.855 1.00 11.21 C ATOM 386 O LEU 48 26.521 30.218 13.087 1.00 11.21 O ATOM 387 CB LEU 48 27.238 33.404 13.976 1.00 11.21 C ATOM 388 CG LEU 48 25.744 33.487 14.297 1.00 11.21 C ATOM 389 CD1 LEU 48 25.462 32.941 15.689 1.00 11.21 C ATOM 390 CD2 LEU 48 25.263 34.928 14.246 1.00 11.21 C ATOM 391 N VAL 49 27.673 31.519 11.611 1.00 11.49 N ATOM 392 CA VAL 49 27.212 30.923 10.387 1.00 11.49 C ATOM 393 C VAL 49 27.701 29.517 10.142 1.00 11.49 C ATOM 394 O VAL 49 26.901 28.594 10.024 1.00 11.49 O ATOM 395 CB VAL 49 27.661 31.736 9.159 1.00 11.49 C ATOM 396 CG1 VAL 49 27.291 31.010 7.875 1.00 11.49 C ATOM 397 CG2 VAL 49 26.991 33.101 9.150 1.00 11.49 C ATOM 398 N GLY 50 29.029 29.276 10.090 1.00 10.87 N ATOM 399 CA GLY 50 29.439 27.939 9.745 1.00 10.87 C ATOM 400 C GLY 50 30.938 27.904 9.643 1.00 10.87 C ATOM 401 O GLY 50 31.592 28.939 9.748 1.00 10.87 O ATOM 402 N LYS 51 31.491 26.690 9.396 1.00 9.46 N ATOM 403 CA LYS 51 32.895 26.328 9.367 1.00 9.46 C ATOM 404 C LYS 51 33.565 26.754 8.089 1.00 9.46 C ATOM 405 O LYS 51 32.917 26.881 7.052 1.00 9.46 O ATOM 406 CB LYS 51 33.060 24.812 9.492 1.00 9.46 C ATOM 407 CG LYS 51 32.652 24.253 10.845 1.00 9.46 C ATOM 408 CD LYS 51 32.859 22.749 10.906 1.00 9.46 C ATOM 409 CE LYS 51 32.468 22.191 12.264 1.00 9.46 C ATOM 410 NZ LYS 51 32.652 20.715 12.335 1.00 9.46 N ATOM 411 N GLU 52 34.907 26.973 8.132 1.00 7.50 N ATOM 412 CA GLU 52 35.623 27.371 6.944 1.00 7.50 C ATOM 413 C GLU 52 37.097 27.397 7.210 1.00 7.50 C ATOM 414 O GLU 52 37.501 27.445 8.369 1.00 7.50 O ATOM 415 CB GLU 52 35.185 28.767 6.497 1.00 7.50 C ATOM 416 CG GLU 52 35.543 29.873 7.476 1.00 7.50 C ATOM 417 CD GLU 52 34.983 31.220 7.063 1.00 7.50 C ATOM 418 OE1 GLU 52 34.267 31.278 6.041 1.00 7.50 O ATOM 419 OE2 GLU 52 35.260 32.218 7.761 1.00 7.50 O ATOM 420 N THR 53 37.914 27.274 6.122 1.00 5.55 N ATOM 421 CA THR 53 39.341 27.533 6.077 1.00 5.55 C ATOM 422 C THR 53 40.127 26.370 5.590 1.00 5.55 C ATOM 423 O THR 53 39.866 25.240 5.985 1.00 5.55 O ATOM 424 CB THR 53 39.896 27.884 7.470 1.00 5.55 C ATOM 425 OG1 THR 53 39.239 29.057 7.967 1.00 5.55 O ATOM 426 CG2 THR 53 41.391 28.151 7.397 1.00 5.55 C ATOM 427 N PHE 54 41.107 26.640 4.698 1.00 5.01 N ATOM 428 CA PHE 54 42.128 25.698 4.335 1.00 5.01 C ATOM 429 C PHE 54 43.024 26.361 3.342 1.00 5.01 C ATOM 430 O PHE 54 42.638 27.334 2.694 1.00 5.01 O ATOM 431 CB PHE 54 41.506 24.445 3.717 1.00 5.01 C ATOM 432 CG PHE 54 40.642 24.723 2.520 1.00 5.01 C ATOM 433 CD1 PHE 54 41.186 24.755 1.248 1.00 5.01 C ATOM 434 CD2 PHE 54 39.285 24.954 2.666 1.00 5.01 C ATOM 435 CE1 PHE 54 40.391 25.011 0.147 1.00 5.01 C ATOM 436 CE2 PHE 54 38.490 25.209 1.565 1.00 5.01 C ATOM 437 CZ PHE 54 39.038 25.238 0.310 1.00 5.01 C ATOM 438 N TYR 55 44.270 25.859 3.217 1.00 4.11 N ATOM 439 CA TYR 55 45.207 26.455 2.317 1.00 4.11 C ATOM 440 C TYR 55 45.602 25.409 1.334 1.00 4.11 C ATOM 441 O TYR 55 45.986 24.300 1.697 1.00 4.11 O ATOM 442 CB TYR 55 46.438 26.953 3.077 1.00 4.11 C ATOM 443 CG TYR 55 46.149 28.085 4.037 1.00 4.11 C ATOM 444 CD1 TYR 55 45.819 27.828 5.362 1.00 4.11 C ATOM 445 CD2 TYR 55 46.205 29.407 3.616 1.00 4.11 C ATOM 446 CE1 TYR 55 45.553 28.855 6.246 1.00 4.11 C ATOM 447 CE2 TYR 55 45.943 30.448 4.486 1.00 4.11 C ATOM 448 CZ TYR 55 45.614 30.161 5.810 1.00 4.11 C ATOM 449 OH TYR 55 45.350 31.187 6.689 1.00 4.11 H ATOM 450 N VAL 56 45.493 25.726 0.032 1.00 4.12 N ATOM 451 CA VAL 56 45.957 24.795 -0.953 1.00 4.12 C ATOM 452 C VAL 56 47.432 24.995 -0.933 1.00 4.12 C ATOM 453 O VAL 56 47.882 26.137 -0.874 1.00 4.12 O ATOM 454 CB VAL 56 45.358 25.096 -2.339 1.00 4.12 C ATOM 455 CG1 VAL 56 45.956 24.173 -3.390 1.00 4.12 C ATOM 456 CG2 VAL 56 43.850 24.893 -2.323 1.00 4.12 C ATOM 457 N GLY 57 48.224 23.902 -0.965 1.00 8.76 N ATOM 458 CA GLY 57 49.642 24.107 -0.955 1.00 8.76 C ATOM 459 C GLY 57 49.991 24.852 -2.196 1.00 8.76 C ATOM 460 O GLY 57 50.085 24.273 -3.279 1.00 8.76 O ATOM 461 N ALA 58 50.200 26.173 -2.057 1.00 11.15 N ATOM 462 CA ALA 58 50.549 27.021 -3.156 1.00 11.15 C ATOM 463 C ALA 58 50.240 28.405 -2.702 1.00 11.15 C ATOM 464 O ALA 58 49.229 28.639 -2.045 1.00 11.15 O ATOM 465 CB ALA 58 49.734 26.655 -4.387 1.00 11.15 C ATOM 466 N ALA 59 51.127 29.358 -3.024 1.00 11.74 N ATOM 467 CA ALA 59 50.930 30.735 -2.678 1.00 11.74 C ATOM 468 C ALA 59 49.790 31.270 -3.485 1.00 11.74 C ATOM 469 O ALA 59 48.989 32.084 -3.028 1.00 11.74 O ATOM 470 CB ALA 59 52.185 31.541 -2.978 1.00 11.74 C ATOM 471 N LYS 60 49.712 30.798 -4.737 1.00 8.01 N ATOM 472 CA LYS 60 48.820 31.321 -5.724 1.00 8.01 C ATOM 473 C LYS 60 47.371 31.155 -5.390 1.00 8.01 C ATOM 474 O LYS 60 46.580 32.049 -5.682 1.00 8.01 O ATOM 475 CB LYS 60 49.037 30.622 -7.067 1.00 8.01 C ATOM 476 CG LYS 60 50.349 30.977 -7.746 1.00 8.01 C ATOM 477 CD LYS 60 50.499 30.251 -9.074 1.00 8.01 C ATOM 478 CE LYS 60 51.823 30.587 -9.741 1.00 8.01 C ATOM 479 NZ LYS 60 51.997 29.857 -11.027 1.00 8.01 N ATOM 480 N THR 61 46.949 30.037 -4.776 1.00 6.14 N ATOM 481 CA THR 61 45.528 29.909 -4.632 1.00 6.14 C ATOM 482 C THR 61 45.121 29.688 -3.208 1.00 6.14 C ATOM 483 O THR 61 45.870 29.139 -2.403 1.00 6.14 O ATOM 484 CB THR 61 44.983 28.720 -5.446 1.00 6.14 C ATOM 485 OG1 THR 61 45.569 27.503 -4.967 1.00 6.14 O ATOM 486 CG2 THR 61 45.322 28.883 -6.919 1.00 6.14 C ATOM 487 N LYS 62 43.898 30.155 -2.869 1.00 4.43 N ATOM 488 CA LYS 62 43.318 29.917 -1.580 1.00 4.43 C ATOM 489 C LYS 62 41.983 29.289 -1.813 1.00 4.43 C ATOM 490 O LYS 62 41.253 29.670 -2.727 1.00 4.43 O ATOM 491 CB LYS 62 43.157 31.232 -0.814 1.00 4.43 C ATOM 492 CG LYS 62 44.471 31.905 -0.453 1.00 4.43 C ATOM 493 CD LYS 62 44.239 33.180 0.343 1.00 4.43 C ATOM 494 CE LYS 62 45.549 33.889 0.642 1.00 4.43 C ATOM 495 NZ LYS 62 45.336 35.142 1.419 1.00 4.43 N ATOM 496 N ALA 63 41.632 28.285 -0.988 1.00 2.21 N ATOM 497 CA ALA 63 40.382 27.619 -1.180 1.00 2.21 C ATOM 498 C ALA 63 39.821 27.313 0.171 1.00 2.21 C ATOM 499 O ALA 63 40.545 27.258 1.162 1.00 2.21 O ATOM 500 CB ALA 63 40.582 26.331 -1.964 1.00 2.21 C ATOM 501 N THR 64 38.488 27.148 0.258 1.00 1.24 N ATOM 502 CA THR 64 37.905 26.863 1.536 1.00 1.24 C ATOM 503 C THR 64 36.793 25.888 1.330 1.00 1.24 C ATOM 504 O THR 64 36.235 25.781 0.238 1.00 1.24 O ATOM 505 CB THR 64 37.347 28.136 2.198 1.00 1.24 C ATOM 506 OG1 THR 64 36.283 28.667 1.398 1.00 1.24 O ATOM 507 CG2 THR 64 38.436 29.189 2.330 1.00 1.24 C ATOM 508 N ILE 65 36.450 25.122 2.383 1.00 1.58 N ATOM 509 CA ILE 65 35.311 24.270 2.247 1.00 1.58 C ATOM 510 C ILE 65 34.239 24.901 3.067 1.00 1.58 C ATOM 511 O ILE 65 34.284 24.886 4.298 1.00 1.58 O ATOM 512 CB ILE 65 35.609 22.846 2.754 1.00 1.58 C ATOM 513 CG1 ILE 65 36.763 22.229 1.961 1.00 1.58 C ATOM 514 CG2 ILE 65 34.385 21.958 2.594 1.00 1.58 C ATOM 515 CD1 ILE 65 37.257 20.914 2.526 1.00 1.58 C ATOM 516 N ASN 66 33.246 25.495 2.378 1.00 2.23 N ATOM 517 CA ASN 66 32.176 26.122 3.082 1.00 2.23 C ATOM 518 C ASN 66 31.334 25.026 3.640 1.00 2.23 C ATOM 519 O ASN 66 31.033 24.058 2.943 1.00 2.23 O ATOM 520 CB ASN 66 31.353 26.998 2.136 1.00 2.23 C ATOM 521 CG ASN 66 32.118 28.214 1.654 1.00 2.23 C ATOM 522 OD1 ASN 66 33.067 28.659 2.300 1.00 2.23 O ATOM 523 ND2 ASN 66 31.707 28.756 0.514 1.00 2.23 N ATOM 524 N ILE 67 30.951 25.148 4.924 1.00 3.25 N ATOM 525 CA ILE 67 30.155 24.134 5.537 1.00 3.25 C ATOM 526 C ILE 67 29.017 24.799 6.251 1.00 3.25 C ATOM 527 O ILE 67 29.125 25.943 6.686 1.00 3.25 O ATOM 528 CB ILE 67 30.972 23.310 6.549 1.00 3.25 C ATOM 529 CG1 ILE 67 32.107 22.567 5.841 1.00 3.25 C ATOM 530 CG2 ILE 67 30.085 22.286 7.243 1.00 3.25 C ATOM 531 CD1 ILE 67 33.113 21.945 6.784 1.00 3.25 C ATOM 532 N ASP 68 27.871 24.090 6.342 1.00 4.37 N ATOM 533 CA ASP 68 26.684 24.591 6.981 1.00 4.37 C ATOM 534 C ASP 68 26.682 23.997 8.367 1.00 4.37 C ATOM 535 O ASP 68 26.488 22.792 8.524 1.00 4.37 O ATOM 536 CB ASP 68 25.437 24.165 6.206 1.00 4.37 C ATOM 537 CG ASP 68 24.157 24.699 6.819 1.00 4.37 C ATOM 538 OD1 ASP 68 24.233 25.331 7.894 1.00 4.37 O ATOM 539 OD2 ASP 68 23.079 24.485 6.225 1.00 4.37 O ATOM 540 N ALA 69 26.968 24.840 9.385 1.00 6.14 N ATOM 541 CA ALA 69 27.073 24.543 10.795 1.00 6.14 C ATOM 542 C ALA 69 25.770 24.230 11.499 1.00 6.14 C ATOM 543 O ALA 69 25.748 23.381 12.388 1.00 6.14 O ATOM 544 CB ALA 69 27.671 25.724 11.543 1.00 6.14 C ATOM 545 N ILE 70 24.675 24.927 11.123 1.00 6.78 N ATOM 546 CA ILE 70 23.346 24.972 11.706 1.00 6.78 C ATOM 547 C ILE 70 23.036 23.930 12.747 1.00 6.78 C ATOM 548 O ILE 70 23.321 22.742 12.608 1.00 6.78 O ATOM 549 CB ILE 70 22.254 24.792 10.635 1.00 6.78 C ATOM 550 CG1 ILE 70 22.287 25.954 9.640 1.00 6.78 C ATOM 551 CG2 ILE 70 20.878 24.750 11.281 1.00 6.78 C ATOM 552 CD1 ILE 70 21.410 25.741 8.425 1.00 6.78 C ATOM 553 N SER 71 22.372 24.389 13.833 1.00 7.74 N ATOM 554 CA SER 71 22.003 23.559 14.944 1.00 7.74 C ATOM 555 C SER 71 21.252 22.387 14.408 1.00 7.74 C ATOM 556 O SER 71 20.526 22.493 13.422 1.00 7.74 O ATOM 557 CB SER 71 21.122 24.335 15.924 1.00 7.74 C ATOM 558 OG SER 71 21.815 25.448 16.462 1.00 7.74 O ATOM 559 N GLY 72 21.386 21.235 15.094 1.00 7.57 N ATOM 560 CA GLY 72 20.797 20.015 14.634 1.00 7.57 C ATOM 561 C GLY 72 21.933 19.177 14.135 1.00 7.57 C ATOM 562 O GLY 72 21.765 18.005 13.800 1.00 7.57 O ATOM 563 N PHE 73 23.137 19.782 14.104 1.00 8.13 N ATOM 564 CA PHE 73 24.360 19.131 13.725 1.00 8.13 C ATOM 565 C PHE 73 24.294 18.670 12.302 1.00 8.13 C ATOM 566 O PHE 73 24.947 17.693 11.940 1.00 8.13 O ATOM 567 CB PHE 73 24.616 17.912 14.614 1.00 8.13 C ATOM 568 CG PHE 73 24.721 18.241 16.077 1.00 8.13 C ATOM 569 CD1 PHE 73 23.654 18.020 16.929 1.00 8.13 C ATOM 570 CD2 PHE 73 25.888 18.772 16.599 1.00 8.13 C ATOM 571 CE1 PHE 73 23.751 18.321 18.274 1.00 8.13 C ATOM 572 CE2 PHE 73 25.985 19.074 17.945 1.00 8.13 C ATOM 573 CZ PHE 73 24.922 18.850 18.781 1.00 8.13 C ATOM 574 N ALA 74 23.501 19.352 11.456 1.00 6.20 N ATOM 575 CA ALA 74 23.472 18.997 10.068 1.00 6.20 C ATOM 576 C ALA 74 24.699 19.584 9.456 1.00 6.20 C ATOM 577 O ALA 74 25.131 20.666 9.850 1.00 6.20 O ATOM 578 CB ALA 74 22.224 19.556 9.404 1.00 6.20 C ATOM 579 N TYR 75 25.316 18.882 8.482 1.00 7.78 N ATOM 580 CA TYR 75 26.484 19.466 7.897 1.00 7.78 C ATOM 581 C TYR 75 26.393 19.360 6.410 1.00 7.78 C ATOM 582 O TYR 75 26.213 18.272 5.865 1.00 7.78 O ATOM 583 CB TYR 75 27.742 18.740 8.376 1.00 7.78 C ATOM 584 CG TYR 75 27.982 18.847 9.866 1.00 7.78 C ATOM 585 CD1 TYR 75 27.476 17.892 10.737 1.00 7.78 C ATOM 586 CD2 TYR 75 28.714 19.903 10.394 1.00 7.78 C ATOM 587 CE1 TYR 75 27.690 17.980 12.099 1.00 7.78 C ATOM 588 CE2 TYR 75 28.938 20.008 11.754 1.00 7.78 C ATOM 589 CZ TYR 75 28.418 19.035 12.607 1.00 7.78 C ATOM 590 OH TYR 75 28.633 19.126 13.963 1.00 7.78 H ATOM 591 N GLU 76 26.519 20.509 5.717 1.00 5.54 N ATOM 592 CA GLU 76 26.557 20.495 4.286 1.00 5.54 C ATOM 593 C GLU 76 27.943 20.932 3.958 1.00 5.54 C ATOM 594 O GLU 76 28.424 21.914 4.520 1.00 5.54 O ATOM 595 CB GLU 76 25.512 21.454 3.713 1.00 5.54 C ATOM 596 CG GLU 76 24.074 21.045 3.990 1.00 5.54 C ATOM 597 CD GLU 76 23.069 21.994 3.372 1.00 5.54 C ATOM 598 OE1 GLU 76 23.496 22.973 2.724 1.00 5.54 O ATOM 599 OE2 GLU 76 21.852 21.759 3.533 1.00 5.54 O ATOM 600 N TYR 77 28.642 20.205 3.063 1.00 5.25 N ATOM 601 CA TYR 77 29.993 20.597 2.791 1.00 5.25 C ATOM 602 C TYR 77 30.097 20.913 1.340 1.00 5.25 C ATOM 603 O TYR 77 29.761 20.098 0.484 1.00 5.25 O ATOM 604 CB TYR 77 30.961 19.464 3.143 1.00 5.25 C ATOM 605 CG TYR 77 30.984 19.113 4.613 1.00 5.25 C ATOM 606 CD1 TYR 77 30.122 18.154 5.130 1.00 5.25 C ATOM 607 CD2 TYR 77 31.867 19.743 5.480 1.00 5.25 C ATOM 608 CE1 TYR 77 30.137 17.827 6.472 1.00 5.25 C ATOM 609 CE2 TYR 77 31.896 19.429 6.826 1.00 5.25 C ATOM 610 CZ TYR 77 31.020 18.462 7.318 1.00 5.25 C ATOM 611 OH TYR 77 31.036 18.138 8.655 1.00 5.25 H ATOM 612 N THR 78 30.559 22.130 1.018 1.00 1.78 N ATOM 613 CA THR 78 30.760 22.443 -0.365 1.00 1.78 C ATOM 614 C THR 78 32.144 22.975 -0.500 1.00 1.78 C ATOM 615 O THR 78 32.559 23.854 0.253 1.00 1.78 O ATOM 616 CB THR 78 29.750 23.496 -0.858 1.00 1.78 C ATOM 617 OG1 THR 78 28.416 23.001 -0.685 1.00 1.78 O ATOM 618 CG2 THR 78 29.975 23.801 -2.331 1.00 1.78 C ATOM 619 N LEU 79 32.908 22.423 -1.458 1.00 1.68 N ATOM 620 CA LEU 79 34.231 22.908 -1.686 1.00 1.68 C ATOM 621 C LEU 79 34.066 24.086 -2.583 1.00 1.68 C ATOM 622 O LEU 79 33.212 24.076 -3.471 1.00 1.68 O ATOM 623 CB LEU 79 35.090 21.829 -2.346 1.00 1.68 C ATOM 624 CG LEU 79 36.571 22.164 -2.537 1.00 1.68 C ATOM 625 CD1 LEU 79 37.266 22.315 -1.193 1.00 1.68 C ATOM 626 CD2 LEU 79 37.275 21.063 -3.315 1.00 1.68 C ATOM 627 N GLU 80 34.848 25.155 -2.338 1.00 1.74 N ATOM 628 CA GLU 80 34.779 26.280 -3.218 1.00 1.74 C ATOM 629 C GLU 80 36.184 26.732 -3.439 1.00 1.74 C ATOM 630 O GLU 80 36.937 26.924 -2.485 1.00 1.74 O ATOM 631 CB GLU 80 33.949 27.401 -2.589 1.00 1.74 C ATOM 632 CG GLU 80 33.820 28.640 -3.459 1.00 1.74 C ATOM 633 CD GLU 80 32.872 29.668 -2.873 1.00 1.74 C ATOM 634 OE1 GLU 80 32.256 29.379 -1.825 1.00 1.74 O ATOM 635 OE2 GLU 80 32.745 30.763 -3.460 1.00 1.74 O ATOM 636 N ILE 81 36.587 26.897 -4.716 1.00 2.10 N ATOM 637 CA ILE 81 37.925 27.318 -5.000 1.00 2.10 C ATOM 638 C ILE 81 37.814 28.647 -5.689 1.00 2.10 C ATOM 639 O ILE 81 37.147 28.766 -6.715 1.00 2.10 O ATOM 640 CB ILE 81 38.652 26.312 -5.910 1.00 2.10 C ATOM 641 CG1 ILE 81 38.678 24.927 -5.260 1.00 2.10 C ATOM 642 CG2 ILE 81 40.087 26.755 -6.154 1.00 2.10 C ATOM 643 CD1 ILE 81 39.426 24.883 -3.945 1.00 2.10 C ATOM 644 N ASN 82 38.451 29.686 -5.113 1.00 2.63 N ATOM 645 CA ASN 82 38.526 30.994 -5.705 1.00 2.63 C ATOM 646 C ASN 82 37.196 31.498 -6.161 1.00 2.63 C ATOM 647 O ASN 82 37.064 31.960 -7.293 1.00 2.63 O ATOM 648 CB ASN 82 39.448 30.978 -6.925 1.00 2.63 C ATOM 649 CG ASN 82 39.866 32.369 -7.358 1.00 2.63 C ATOM 650 OD1 ASN 82 39.923 33.292 -6.546 1.00 2.63 O ATOM 651 ND2 ASN 82 40.161 32.523 -8.644 1.00 2.63 N ATOM 652 N GLY 83 36.163 31.435 -5.305 1.00 6.32 N ATOM 653 CA GLY 83 34.910 32.003 -5.705 1.00 6.32 C ATOM 654 C GLY 83 34.243 31.131 -6.723 1.00 6.32 C ATOM 655 O GLY 83 33.396 31.605 -7.478 1.00 6.32 O ATOM 656 N LYS 84 34.618 29.839 -6.794 1.00 6.07 N ATOM 657 CA LYS 84 33.921 28.978 -7.705 1.00 6.07 C ATOM 658 C LYS 84 33.414 27.820 -6.913 1.00 6.07 C ATOM 659 O LYS 84 34.166 27.190 -6.171 1.00 6.07 O ATOM 660 CB LYS 84 34.861 28.491 -8.809 1.00 6.07 C ATOM 661 CG LYS 84 35.353 29.591 -9.735 1.00 6.07 C ATOM 662 CD LYS 84 36.209 29.027 -10.857 1.00 6.07 C ATOM 663 CE LYS 84 36.733 30.131 -11.761 1.00 6.07 C ATOM 664 NZ LYS 84 37.553 29.591 -12.880 1.00 6.07 N ATOM 665 N SER 85 32.108 27.517 -7.040 1.00 6.54 N ATOM 666 CA SER 85 31.571 26.393 -6.335 1.00 6.54 C ATOM 667 C SER 85 31.969 25.181 -7.098 1.00 6.54 C ATOM 668 O SER 85 32.050 25.212 -8.324 1.00 6.54 O ATOM 669 CB SER 85 30.046 26.492 -6.250 1.00 6.54 C ATOM 670 OG SER 85 29.454 26.362 -7.531 1.00 6.54 O ATOM 671 N LEU 86 32.243 24.079 -6.383 1.00 3.76 N ATOM 672 CA LEU 86 32.571 22.866 -7.060 1.00 3.76 C ATOM 673 C LEU 86 31.498 21.901 -6.690 1.00 3.76 C ATOM 674 O LEU 86 31.043 21.868 -5.547 1.00 3.76 O ATOM 675 CB LEU 86 33.942 22.356 -6.612 1.00 3.76 C ATOM 676 CG LEU 86 35.128 23.289 -6.868 1.00 3.76 C ATOM 677 CD1 LEU 86 36.401 22.719 -6.261 1.00 3.76 C ATOM 678 CD2 LEU 86 35.355 23.474 -8.361 1.00 3.76 C ATOM 679 N LYS 87 31.051 21.091 -7.662 1.00 3.97 N ATOM 680 CA LYS 87 29.972 20.208 -7.361 1.00 3.97 C ATOM 681 C LYS 87 30.447 19.221 -6.361 1.00 3.97 C ATOM 682 O LYS 87 31.574 18.732 -6.437 1.00 3.97 O ATOM 683 CB LYS 87 29.509 19.478 -8.623 1.00 3.97 C ATOM 684 CG LYS 87 28.835 20.376 -9.647 1.00 3.97 C ATOM 685 CD LYS 87 28.362 19.581 -10.853 1.00 3.97 C ATOM 686 CE LYS 87 27.732 20.486 -11.899 1.00 3.97 C ATOM 687 NZ LYS 87 27.246 19.718 -13.079 1.00 3.97 N ATOM 688 N LYS 88 29.582 18.929 -5.377 1.00 2.92 N ATOM 689 CA LYS 88 29.923 17.967 -4.385 1.00 2.92 C ATOM 690 C LYS 88 29.814 16.640 -5.036 1.00 2.92 C ATOM 691 O LYS 88 28.932 16.411 -5.863 1.00 2.92 O ATOM 692 CB LYS 88 28.966 18.060 -3.196 1.00 2.92 C ATOM 693 CG LYS 88 27.538 17.645 -3.514 1.00 2.92 C ATOM 694 CD LYS 88 26.652 17.724 -2.281 1.00 2.92 C ATOM 695 CE LYS 88 25.233 17.279 -2.592 1.00 2.92 C ATOM 696 NZ LYS 88 24.321 17.480 -1.432 1.00 2.92 N ATOM 697 N TYR 89 30.733 15.734 -4.671 1.00 2.64 N ATOM 698 CA TYR 89 30.646 14.393 -5.142 1.00 2.64 C ATOM 699 C TYR 89 30.224 13.615 -3.944 1.00 2.64 C ATOM 700 O TYR 89 30.993 13.434 -3.001 1.00 2.64 O ATOM 701 CB TYR 89 32.001 13.923 -5.674 1.00 2.64 C ATOM 702 CG TYR 89 31.982 12.526 -6.253 1.00 2.64 C ATOM 703 CD1 TYR 89 30.780 11.889 -6.532 1.00 2.64 C ATOM 704 CD2 TYR 89 33.165 11.850 -6.518 1.00 2.64 C ATOM 705 CE1 TYR 89 30.752 10.613 -7.061 1.00 2.64 C ATOM 706 CE2 TYR 89 33.156 10.573 -7.047 1.00 2.64 C ATOM 707 CZ TYR 89 31.936 9.957 -7.318 1.00 2.64 C ATOM 708 OH TYR 89 31.911 8.686 -7.845 1.00 2.64 H ATOM 709 N MET 90 28.958 13.160 -3.941 1.00 2.47 N ATOM 710 CA MET 90 28.463 12.456 -2.798 1.00 2.47 C ATOM 711 C MET 90 28.331 10.982 -3.149 1.00 2.47 C ATOM 712 O MET 90 27.934 10.672 -4.305 1.00 2.47 O ATOM 713 CB MET 90 27.095 13.002 -2.384 1.00 2.47 C ATOM 714 CG MET 90 27.119 14.447 -1.917 1.00 2.47 C ATOM 715 SD MET 90 28.160 14.691 -0.466 1.00 2.47 S ATOM 716 CE MET 90 27.193 13.858 0.790 1.00 2.47 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 716 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 63.63 60.1 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 53.59 69.5 118 100.0 118 ARMSMC SURFACE . . . . . . . . 67.94 55.6 108 100.0 108 ARMSMC BURIED . . . . . . . . 56.34 67.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.76 48.0 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 85.77 50.0 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 82.92 53.8 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 99.91 31.8 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 66.83 71.0 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.88 58.2 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 63.39 63.0 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 56.02 69.2 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 73.21 45.5 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 53.03 77.3 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.12 54.2 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 65.12 54.2 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 61.89 52.9 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 53.13 66.7 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 92.16 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.18 46.2 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 86.18 46.2 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 98.23 30.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 89.38 45.5 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 65.87 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.42 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.42 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0491 CRMSCA SECONDARY STRUCTURE . . 2.68 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.15 55 100.0 55 CRMSCA BURIED . . . . . . . . 2.93 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.49 442 100.0 442 CRMSMC SECONDARY STRUCTURE . . 2.88 293 100.0 293 CRMSMC SURFACE . . . . . . . . 5.20 269 100.0 269 CRMSMC BURIED . . . . . . . . 3.08 173 100.0 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.46 356 100.0 356 CRMSSC RELIABLE SIDE CHAINS . 6.57 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 4.67 252 100.0 252 CRMSSC SURFACE . . . . . . . . 7.67 204 100.0 204 CRMSSC BURIED . . . . . . . . 4.33 152 100.0 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.49 716 100.0 716 CRMSALL SECONDARY STRUCTURE . . 3.88 488 100.0 488 CRMSALL SURFACE . . . . . . . . 6.42 424 100.0 424 CRMSALL BURIED . . . . . . . . 3.74 292 100.0 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.749 0.313 0.339 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 2.624 0.346 0.391 59 100.0 59 ERRCA SURFACE . . . . . . . . 3.233 0.323 0.345 55 100.0 55 ERRCA BURIED . . . . . . . . 1.990 0.296 0.329 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.734 0.309 0.336 442 100.0 442 ERRMC SECONDARY STRUCTURE . . 2.543 0.331 0.376 293 100.0 293 ERRMC SURFACE . . . . . . . . 3.254 0.323 0.343 269 100.0 269 ERRMC BURIED . . . . . . . . 1.925 0.288 0.324 173 100.0 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.560 0.241 0.221 356 100.0 356 ERRSC RELIABLE SIDE CHAINS . 2.633 0.242 0.223 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 2.108 0.244 0.245 252 100.0 252 ERRSC SURFACE . . . . . . . . 3.205 0.244 0.202 204 100.0 204 ERRSC BURIED . . . . . . . . 1.695 0.236 0.247 152 100.0 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.662 0.278 0.284 716 100.0 716 ERRALL SECONDARY STRUCTURE . . 2.350 0.290 0.314 488 100.0 488 ERRALL SURFACE . . . . . . . . 3.236 0.288 0.282 424 100.0 424 ERRALL BURIED . . . . . . . . 1.830 0.263 0.287 292 100.0 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 34 49 67 88 90 90 DISTCA CA (P) 4.44 37.78 54.44 74.44 97.78 90 DISTCA CA (RMS) 0.80 1.42 1.79 2.48 4.17 DISTCA ALL (N) 25 218 340 475 657 716 716 DISTALL ALL (P) 3.49 30.45 47.49 66.34 91.76 716 DISTALL ALL (RMS) 0.86 1.48 1.91 2.64 4.30 DISTALL END of the results output