####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 90 ( 714), selected 90 , name T0540TS009_1-D1 # Molecule2: number of CA atoms 90 ( 716), selected 90 , name T0540-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0540TS009_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 60 30 - 89 4.97 5.72 LONGEST_CONTINUOUS_SEGMENT: 60 31 - 90 4.81 5.72 LCS_AVERAGE: 64.20 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 4 - 24 1.63 6.88 LCS_AVERAGE: 15.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 73 - 84 1.00 6.27 LONGEST_CONTINUOUS_SEGMENT: 12 74 - 85 0.98 6.14 LCS_AVERAGE: 8.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 90 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 28 1 3 5 7 9 16 21 26 29 34 37 42 57 64 67 68 71 75 78 80 LCS_GDT T 2 T 2 3 4 28 3 3 4 5 5 17 21 34 41 50 56 64 69 70 70 76 78 80 84 88 LCS_GDT D 3 D 3 3 7 54 3 3 4 5 21 24 28 34 41 59 62 69 69 71 74 77 81 82 85 88 LCS_GDT L 4 L 4 3 21 55 3 3 6 8 31 38 47 52 59 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 5 V 5 8 21 55 3 15 34 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 6 A 6 8 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 7 V 7 8 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT W 8 W 8 8 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT D 9 D 9 8 21 55 7 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 10 V 10 8 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 11 A 11 8 21 55 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT L 12 L 12 8 21 55 4 8 15 31 45 50 50 53 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT S 13 S 13 6 21 55 4 5 11 18 22 38 44 51 59 65 68 71 74 76 78 79 81 82 84 86 LCS_GDT D 14 D 14 11 21 55 10 22 33 40 45 50 50 52 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 15 G 15 11 21 55 6 18 33 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 16 V 16 11 21 55 10 23 33 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT H 17 H 17 11 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 18 K 18 11 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 19 I 19 11 21 55 10 25 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 20 E 20 11 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT F 21 F 21 11 21 55 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 22 E 22 11 21 55 4 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT H 23 H 23 11 21 55 6 17 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 24 G 24 11 21 55 3 11 32 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT T 25 T 25 3 3 55 3 3 3 3 4 5 9 9 13 24 41 52 58 68 74 79 81 82 85 88 LCS_GDT T 26 T 26 4 6 55 3 4 4 5 5 7 8 10 12 17 20 30 45 58 65 70 80 82 85 88 LCS_GDT S 27 S 27 4 6 55 3 4 4 5 5 6 7 10 12 15 20 26 35 41 50 57 70 79 85 88 LCS_GDT G 28 G 28 4 6 55 3 4 4 5 5 6 7 9 12 15 20 28 35 41 51 63 71 79 85 88 LCS_GDT K 29 K 29 4 6 55 3 4 4 5 5 6 7 9 12 15 17 21 26 41 45 52 61 71 81 88 LCS_GDT R 30 R 30 4 6 60 3 3 4 5 5 6 7 11 13 16 20 24 35 41 50 61 70 79 85 88 LCS_GDT V 31 V 31 3 6 60 3 4 4 4 5 6 7 13 21 31 42 50 58 68 73 79 81 82 85 88 LCS_GDT V 32 V 32 4 15 60 3 4 13 35 44 50 50 52 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT Y 33 Y 33 7 15 60 10 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 34 V 34 7 15 60 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT D 35 D 35 7 15 60 3 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 36 G 36 7 15 60 4 7 25 37 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 37 K 37 7 15 60 4 25 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 38 E 38 7 15 60 10 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 39 E 39 7 15 60 4 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 40 I 40 4 15 60 4 10 27 37 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT R 41 R 41 4 15 60 4 4 6 16 22 33 44 49 55 63 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 42 K 42 4 15 60 4 4 7 15 22 33 37 46 54 62 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 43 E 43 4 15 60 4 4 7 11 20 24 30 38 47 55 62 71 74 76 78 79 81 82 85 88 LCS_GDT W 44 W 44 4 15 60 4 4 7 14 20 25 30 37 42 53 60 71 73 76 78 79 81 82 85 88 LCS_GDT M 45 M 45 4 15 60 3 4 8 18 26 37 46 49 56 63 68 71 74 76 78 79 81 82 85 88 LCS_GDT F 46 F 46 4 15 60 3 5 10 16 21 33 37 48 54 58 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 47 K 47 4 6 60 3 3 5 13 15 36 46 50 56 63 68 71 74 76 78 79 81 82 85 88 LCS_GDT L 48 L 48 4 8 60 3 3 5 6 8 10 27 32 54 62 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 49 V 49 8 10 60 6 9 31 37 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 50 G 50 8 10 60 4 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 51 K 51 8 10 60 3 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 52 E 52 8 11 60 7 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT T 53 T 53 8 11 60 3 20 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT F 54 F 54 8 11 60 4 22 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT Y 55 Y 55 8 11 60 4 13 29 39 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT V 56 V 56 8 11 60 4 13 27 38 44 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 57 G 57 8 11 60 4 7 18 21 32 42 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 58 A 58 6 12 60 3 5 7 10 20 28 44 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 59 A 59 6 12 60 3 6 9 16 21 28 43 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 60 K 60 5 12 60 3 5 9 16 21 28 43 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT T 61 T 61 9 12 60 5 7 9 10 21 28 41 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 62 K 62 9 12 60 3 4 9 10 12 28 32 50 59 65 67 71 74 76 78 79 81 82 85 88 LCS_GDT A 63 A 63 9 12 60 3 6 9 9 12 28 35 50 59 65 67 71 74 76 78 79 81 82 85 88 LCS_GDT T 64 T 64 9 12 60 6 7 9 16 21 30 43 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 65 I 65 9 12 60 6 7 9 9 13 28 43 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT N 66 N 66 9 12 60 6 7 9 9 13 28 41 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 67 I 67 9 12 60 6 7 9 9 13 23 41 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT D 68 D 68 9 12 60 6 7 9 9 13 28 41 52 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 69 A 69 9 12 60 6 7 9 9 13 28 40 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 70 I 70 3 12 60 3 4 5 8 12 12 16 33 54 63 66 71 72 76 78 79 81 82 85 88 LCS_GDT S 71 S 71 3 11 60 3 3 4 5 16 18 30 33 44 52 53 64 72 76 78 79 81 82 85 88 LCS_GDT G 72 G 72 3 14 60 3 3 4 6 8 8 34 38 45 48 53 58 72 76 78 79 81 82 85 88 LCS_GDT F 73 F 73 12 16 60 3 13 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT A 74 A 74 12 16 60 3 5 31 38 46 50 50 53 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT Y 75 Y 75 12 16 60 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 76 E 76 12 16 60 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT Y 77 Y 77 12 16 60 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT T 78 T 78 12 16 60 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT L 79 L 79 12 16 60 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT E 80 E 80 12 16 60 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT I 81 I 81 12 16 60 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT N 82 N 82 12 16 60 4 19 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT G 83 G 83 12 16 60 4 19 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 84 K 84 12 16 60 6 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT S 85 S 85 12 16 60 7 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT L 86 L 86 10 16 60 3 9 23 36 46 50 50 53 61 65 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 87 K 87 6 16 60 3 5 10 18 27 33 44 49 54 59 68 71 74 76 78 79 81 82 85 88 LCS_GDT K 88 K 88 6 16 60 3 8 18 26 33 44 50 51 57 63 68 71 74 76 78 79 81 82 85 88 LCS_GDT Y 89 Y 89 6 13 60 3 4 6 9 11 24 26 34 39 47 54 60 64 69 75 78 80 82 84 88 LCS_GDT M 90 M 90 3 13 60 0 3 5 8 9 28 37 45 49 56 66 69 71 73 76 78 81 82 85 88 LCS_AVERAGE LCS_A: 29.53 ( 8.44 15.95 64.20 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 26 36 40 46 50 50 54 61 65 68 71 74 76 78 79 81 82 85 88 GDT PERCENT_AT 12.22 28.89 40.00 44.44 51.11 55.56 55.56 60.00 67.78 72.22 75.56 78.89 82.22 84.44 86.67 87.78 90.00 91.11 94.44 97.78 GDT RMS_LOCAL 0.34 0.67 0.95 1.08 1.39 1.55 1.55 2.51 2.65 2.87 3.15 3.50 3.63 3.83 4.03 4.13 4.34 4.45 5.02 5.35 GDT RMS_ALL_AT 5.93 5.76 5.83 5.84 5.77 5.77 5.77 5.86 5.81 5.87 5.71 5.66 5.70 5.71 5.73 5.72 5.66 5.63 5.57 5.54 # Checking swapping # possible swapping detected: D 3 D 3 # possible swapping detected: E 20 E 20 # possible swapping detected: E 39 E 39 # possible swapping detected: E 43 E 43 # possible swapping detected: F 46 F 46 # possible swapping detected: Y 55 Y 55 # possible swapping detected: Y 77 Y 77 # possible swapping detected: Y 89 Y 89 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 14.040 0 0.399 1.287 15.859 0.000 0.000 LGA T 2 T 2 10.321 0 0.673 2.168 12.870 1.071 0.612 LGA D 3 D 3 8.935 0 0.320 2.509 12.395 8.452 9.643 LGA L 4 L 4 4.802 0 0.625 2.183 12.552 42.619 24.583 LGA V 5 V 5 1.597 0 0.701 1.514 6.116 77.381 54.218 LGA A 6 A 6 0.230 0 0.078 0.079 0.627 100.000 98.095 LGA V 7 V 7 0.708 0 0.054 0.106 1.044 90.476 89.184 LGA W 8 W 8 0.527 0 0.091 0.181 1.190 88.214 96.633 LGA D 9 D 9 0.582 0 0.039 0.139 0.603 92.857 95.238 LGA V 10 V 10 0.737 0 0.069 0.126 1.593 92.857 88.027 LGA A 11 A 11 1.555 0 0.065 0.066 2.516 69.048 69.810 LGA L 12 L 12 3.804 0 0.087 1.514 6.607 39.524 38.810 LGA S 13 S 13 6.168 0 0.363 0.570 8.396 21.667 16.429 LGA D 14 D 14 3.853 0 0.159 1.151 6.646 41.786 30.655 LGA G 15 G 15 3.305 0 0.122 0.122 3.362 51.786 51.786 LGA V 16 V 16 2.847 0 0.155 1.017 4.121 51.905 50.272 LGA H 17 H 17 2.078 0 0.114 1.007 4.632 70.952 58.143 LGA K 18 K 18 1.914 0 0.060 1.079 4.450 70.833 63.598 LGA I 19 I 19 1.789 0 0.035 0.643 2.847 72.857 66.905 LGA E 20 E 20 0.810 0 0.032 0.618 3.933 88.214 71.534 LGA F 21 F 21 0.697 0 0.056 0.393 2.172 92.857 82.554 LGA E 22 E 22 1.112 0 0.040 0.767 2.886 85.952 74.339 LGA H 23 H 23 1.784 2 0.067 0.525 5.826 56.786 39.952 LGA G 24 G 24 2.380 0 0.574 0.574 4.603 49.524 49.524 LGA T 25 T 25 9.301 0 0.106 0.098 12.253 2.857 1.633 LGA T 26 T 26 11.725 0 0.747 1.076 14.226 0.000 0.000 LGA S 27 S 27 13.057 0 0.611 0.574 13.476 0.000 0.000 LGA G 28 G 28 12.754 0 0.729 0.729 12.957 0.000 0.000 LGA K 29 K 29 14.080 0 0.285 1.060 17.507 0.000 0.000 LGA R 30 R 30 13.575 0 0.587 1.585 21.969 0.000 0.000 LGA V 31 V 31 10.462 0 0.591 1.461 13.591 2.976 1.701 LGA V 32 V 32 3.267 0 0.639 1.411 5.658 52.262 61.361 LGA Y 33 Y 33 1.277 0 0.300 1.347 5.277 71.071 58.810 LGA V 34 V 34 1.756 0 0.187 0.988 4.665 71.071 60.544 LGA D 35 D 35 1.894 0 0.297 0.273 4.344 75.000 61.786 LGA G 36 G 36 2.584 0 0.148 0.148 2.584 64.881 64.881 LGA K 37 K 37 0.958 0 0.042 0.369 3.002 85.952 75.344 LGA E 38 E 38 0.959 0 0.062 0.541 2.361 90.476 79.841 LGA E 39 E 39 1.243 0 0.631 0.499 2.478 77.262 79.577 LGA I 40 I 40 2.841 0 0.032 1.058 6.850 40.714 32.262 LGA R 41 R 41 6.890 0 0.208 1.697 9.809 19.048 8.095 LGA K 42 K 42 8.680 0 0.628 1.591 9.198 2.976 6.561 LGA E 43 E 43 9.607 0 0.380 1.070 10.376 0.476 1.217 LGA W 44 W 44 11.377 0 0.049 1.034 17.622 0.000 0.000 LGA M 45 M 45 7.724 0 0.050 1.324 10.930 2.500 16.726 LGA F 46 F 46 10.547 0 0.633 1.217 17.983 1.429 0.519 LGA K 47 K 47 7.833 0 0.602 1.226 8.816 4.405 6.349 LGA L 48 L 48 8.919 0 0.398 0.929 14.791 11.071 5.536 LGA V 49 V 49 3.167 0 0.168 0.986 5.480 47.738 44.082 LGA G 50 G 50 1.761 0 0.265 0.265 1.843 75.000 75.000 LGA K 51 K 51 1.524 0 0.157 1.230 5.137 77.143 68.307 LGA E 52 E 52 0.827 0 0.121 1.177 4.940 88.214 73.492 LGA T 53 T 53 1.119 0 0.099 1.099 3.414 83.690 73.742 LGA F 54 F 54 0.871 0 0.092 0.356 1.448 85.952 88.095 LGA Y 55 Y 55 1.654 0 0.030 0.195 2.404 75.000 71.587 LGA V 56 V 56 2.094 0 0.119 0.150 2.580 68.810 65.986 LGA G 57 G 57 4.048 0 0.152 0.152 4.048 43.452 43.452 LGA A 58 A 58 4.949 0 0.037 0.038 5.585 30.357 28.571 LGA A 59 A 59 4.185 0 0.674 0.627 4.317 41.786 40.857 LGA K 60 K 60 4.896 0 0.375 0.737 11.899 31.548 17.196 LGA T 61 T 61 4.609 0 0.190 1.124 6.384 34.286 34.694 LGA K 62 K 62 5.209 0 0.089 0.861 5.416 26.190 30.423 LGA A 63 A 63 5.230 0 0.152 0.171 5.964 27.500 26.286 LGA T 64 T 64 3.970 0 0.056 1.165 5.836 38.690 36.667 LGA I 65 I 65 4.430 0 0.093 0.714 4.926 35.714 33.571 LGA N 66 N 66 4.396 0 0.027 1.088 7.048 35.714 28.095 LGA I 67 I 67 4.818 0 0.019 1.563 9.613 30.119 21.964 LGA D 68 D 68 4.565 0 0.169 0.596 6.374 34.286 31.131 LGA A 69 A 69 4.508 0 0.142 0.203 4.942 31.429 33.810 LGA I 70 I 70 7.880 0 0.526 1.478 12.937 9.643 4.821 LGA S 71 S 71 8.959 0 0.252 0.309 11.495 4.286 2.857 LGA G 72 G 72 9.097 0 0.205 0.205 9.097 7.738 7.738 LGA F 73 F 73 2.509 0 0.380 1.146 8.602 52.143 33.593 LGA A 74 A 74 3.693 0 0.684 0.668 5.405 50.119 45.333 LGA Y 75 Y 75 1.859 0 0.164 0.454 5.947 71.071 54.802 LGA E 76 E 76 1.460 0 0.051 0.728 1.703 77.143 81.534 LGA Y 77 Y 77 1.412 0 0.063 0.195 1.730 81.429 75.714 LGA T 78 T 78 1.420 0 0.037 1.086 3.107 81.429 74.490 LGA L 79 L 79 1.487 0 0.039 1.139 2.574 77.143 72.143 LGA E 80 E 80 1.933 0 0.070 0.669 2.820 72.857 69.312 LGA I 81 I 81 1.867 0 0.066 0.629 2.704 72.857 68.929 LGA N 82 N 82 2.187 0 0.036 1.127 4.151 64.881 61.369 LGA G 83 G 83 2.329 0 0.111 0.111 2.364 64.762 64.762 LGA K 84 K 84 2.128 0 0.030 1.181 5.264 70.952 58.783 LGA S 85 S 85 1.486 0 0.059 0.114 3.616 63.690 60.476 LGA L 86 L 86 3.772 0 0.072 1.161 8.053 50.238 39.821 LGA K 87 K 87 6.317 0 0.058 0.277 12.861 19.286 8.942 LGA K 88 K 88 5.003 0 0.084 0.905 8.686 16.310 36.243 LGA Y 89 Y 89 9.840 0 0.591 0.544 11.990 3.810 1.270 LGA M 90 M 90 7.897 0 0.112 1.004 13.238 3.214 1.726 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 90 360 359 99.72 716 714 99.72 90 SUMMARY(RMSD_GDC): 5.533 5.439 6.318 46.574 42.611 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 90 90 4.0 54 2.51 55.278 48.242 2.067 LGA_LOCAL RMSD: 2.512 Number of atoms: 54 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.856 Number of assigned atoms: 90 Std_ASGN_ATOMS RMSD: 5.533 Standard rmsd on all 90 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.021614 * X + 0.843242 * Y + 0.537099 * Z + 40.248489 Y_new = 0.447260 * X + -0.472312 * Y + 0.759526 * Z + 17.145319 Z_new = 0.894143 * X + 0.256639 * Y + -0.366940 * Z + -2.182424 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.619084 -1.106513 2.531267 [DEG: 92.7667 -63.3985 145.0309 ] ZXZ: 2.526084 1.946514 1.291287 [DEG: 144.7340 111.5270 73.9853 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0540TS009_1-D1 REMARK 2: T0540-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0540TS009_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 90 90 4.0 54 2.51 48.242 5.53 REMARK ---------------------------------------------------------- MOLECULE T0540TS009_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0540 REMARK MODEL 1 REMARK PARENT 2KD2 ATOM 1 N MET 1 28.050 8.945 -1.374 1.00150.37 N ATOM 2 CA MET 1 26.967 8.029 -0.949 1.00150.37 C ATOM 3 C MET 1 26.894 8.075 0.540 1.00150.37 C ATOM 4 O MET 1 25.946 7.591 1.156 1.00150.37 O ATOM 5 CB MET 1 27.270 6.611 -1.471 1.00150.37 C ATOM 6 CG MET 1 26.136 5.598 -1.280 1.00150.37 C ATOM 7 SD MET 1 26.063 4.839 0.371 1.00150.37 S ATOM 8 CE MET 1 24.377 4.178 0.222 1.00150.37 C ATOM 9 N THR 2 27.912 8.702 1.157 1.00234.55 N ATOM 10 CA THR 2 27.873 8.853 2.575 1.00234.55 C ATOM 11 C THR 2 27.875 10.310 2.894 1.00234.55 C ATOM 12 O THR 2 28.591 11.105 2.286 1.00234.55 O ATOM 13 CB THR 2 25.703 12.202 5.309 1.00 95.46 C ATOM 14 OG1 THR 2 28.801 8.335 4.697 1.00234.55 O ATOM 15 CG2 THR 2 30.326 8.887 2.884 1.00234.55 C ATOM 16 N ASP 3 27.024 10.684 3.867 1.00 95.46 N ATOM 17 CA ASP 3 26.861 12.040 4.300 1.00 95.46 C ATOM 18 C ASP 3 28.115 12.485 4.981 1.00 95.46 C ATOM 19 O ASP 3 28.516 13.642 4.869 1.00 95.46 O ATOM 20 CB ASP 3 30.329 10.640 7.378 1.00 58.96 C ATOM 21 CG ASP 3 29.192 10.209 8.323 1.00 58.96 C ATOM 22 OD1 ASP 3 26.069 14.538 4.906 1.00 95.46 O ATOM 23 OD2 ASP 3 24.139 13.932 5.832 1.00 95.46 O ATOM 24 N LEU 4 28.768 11.555 5.704 1.00 58.96 N ATOM 25 CA LEU 4 29.906 11.844 6.527 1.00 58.96 C ATOM 26 C LEU 4 31.079 12.305 5.719 1.00 58.96 C ATOM 27 O LEU 4 31.849 13.145 6.180 1.00 58.96 O ATOM 28 CB LEU 4 30.329 10.640 7.378 1.00 58.96 C ATOM 29 CG LEU 4 29.192 10.209 8.323 1.00 58.96 C ATOM 30 CD1 LEU 4 26.069 14.538 4.906 1.00 95.46 C ATOM 31 CD2 LEU 4 24.139 13.932 5.832 1.00 95.46 C ATOM 32 N VAL 5 31.275 11.776 4.497 1.00102.21 N ATOM 33 CA VAL 5 32.435 12.211 3.766 1.00102.21 C ATOM 34 C VAL 5 32.008 13.207 2.739 1.00102.21 C ATOM 35 O VAL 5 30.842 13.260 2.352 1.00102.21 O ATOM 36 CB VAL 5 33.112 11.138 2.977 1.00102.21 C ATOM 37 CG1 VAL 5 32.265 10.875 1.716 1.00102.21 C ATOM 38 CG2 VAL 5 34.540 11.605 2.654 1.00102.21 C ATOM 39 N ALA 6 32.961 14.054 2.300 1.00 52.07 N ATOM 40 CA ALA 6 32.730 14.995 1.241 1.00 52.07 C ATOM 41 C ALA 6 33.815 14.740 0.248 1.00 52.07 C ATOM 42 O ALA 6 34.958 14.480 0.622 1.00 52.07 O ATOM 43 CB ALA 6 32.849 16.466 1.679 1.00 52.07 C ATOM 44 N VAL 7 33.486 14.778 -1.057 1.00 56.14 N ATOM 45 CA VAL 7 34.516 14.523 -2.021 1.00 56.14 C ATOM 46 C VAL 7 34.352 15.492 -3.140 1.00 56.14 C ATOM 47 O VAL 7 33.255 15.973 -3.421 1.00 56.14 O ATOM 48 CB VAL 7 34.481 13.121 -2.567 1.00 56.14 C ATOM 49 CG1 VAL 7 35.507 12.978 -3.709 1.00 56.14 C ATOM 50 CG2 VAL 7 34.745 12.168 -1.388 1.00 56.14 C ATOM 51 N TRP 8 35.477 15.829 -3.789 1.00105.54 N ATOM 52 CA TRP 8 35.402 16.762 -4.865 1.00105.54 C ATOM 53 C TRP 8 36.437 16.362 -5.881 1.00105.54 C ATOM 54 O TRP 8 37.443 15.735 -5.557 1.00105.54 O ATOM 55 CB TRP 8 35.625 18.208 -4.365 1.00105.54 C ATOM 56 CG TRP 8 34.506 18.745 -3.477 1.00105.54 C ATOM 57 CD1 TRP 8 33.287 19.213 -3.875 1.00105.54 C ATOM 58 CD2 TRP 8 34.546 18.924 -2.049 1.00105.54 C ATOM 59 NE1 TRP 8 32.570 19.661 -2.789 1.00105.54 N ATOM 60 CE2 TRP 8 33.337 19.492 -1.656 1.00105.54 C ATOM 61 CE3 TRP 8 35.511 18.656 -1.121 1.00105.54 C ATOM 62 CZ2 TRP 8 33.081 19.793 -0.345 1.00105.54 C ATOM 63 CZ3 TRP 8 35.252 18.943 0.196 1.00105.54 C ATOM 64 CH2 TRP 8 34.059 19.506 0.584 1.00105.54 H ATOM 65 N ASP 9 36.216 16.658 -7.172 1.00 58.64 N ATOM 66 CA ASP 9 37.230 16.257 -8.102 1.00 58.64 C ATOM 67 C ASP 9 37.442 17.388 -9.039 1.00 58.64 C ATOM 68 O ASP 9 36.527 17.778 -9.761 1.00 58.64 O ATOM 69 CB ASP 9 36.838 15.054 -8.970 1.00 58.64 C ATOM 70 CG ASP 9 36.750 13.817 -8.088 1.00 58.64 C ATOM 71 OD1 ASP 9 37.782 13.453 -7.467 1.00 58.64 O ATOM 72 OD2 ASP 9 35.641 13.226 -8.022 1.00 58.64 O ATOM 73 N VAL 10 38.657 17.961 -9.040 1.00 48.69 N ATOM 74 CA VAL 10 38.912 19.016 -9.970 1.00 48.69 C ATOM 75 C VAL 10 40.265 18.812 -10.547 1.00 48.69 C ATOM 76 O VAL 10 41.123 18.153 -9.958 1.00 48.69 O ATOM 77 CB VAL 10 38.842 20.398 -9.388 1.00 48.69 C ATOM 78 CG1 VAL 10 37.368 20.748 -9.125 1.00 48.69 C ATOM 79 CG2 VAL 10 39.700 20.427 -8.113 1.00 48.69 C ATOM 80 N ALA 11 40.481 19.379 -11.746 1.00 37.43 N ATOM 81 CA ALA 11 41.747 19.180 -12.369 1.00 37.43 C ATOM 82 C ALA 11 42.713 20.078 -11.685 1.00 37.43 C ATOM 83 O ALA 11 42.625 21.302 -11.774 1.00 37.43 O ATOM 84 CB ALA 11 41.759 19.533 -13.867 1.00 37.43 C ATOM 85 N LEU 12 43.667 19.465 -10.966 1.00 91.01 N ATOM 86 CA LEU 12 44.666 20.212 -10.273 1.00 91.01 C ATOM 87 C LEU 12 45.998 19.665 -10.647 1.00 91.01 C ATOM 88 O LEU 12 46.147 18.471 -10.905 1.00 91.01 O ATOM 89 CB LEU 12 44.648 20.051 -8.755 1.00 91.01 C ATOM 90 CG LEU 12 45.808 20.818 -8.096 1.00 91.01 C ATOM 91 CD1 LEU 12 45.516 22.325 -8.036 1.00 91.01 C ATOM 92 CD2 LEU 12 46.220 20.195 -6.756 1.00 91.01 C ATOM 93 N SER 13 47.008 20.550 -10.662 1.00159.17 N ATOM 94 CA SER 13 48.351 20.118 -10.891 1.00159.17 C ATOM 95 C SER 13 48.411 19.369 -12.179 1.00159.17 C ATOM 96 O SER 13 49.154 18.395 -12.306 1.00159.17 O ATOM 97 CB SER 13 48.857 19.196 -9.772 1.00159.17 C ATOM 98 OG SER 13 48.799 19.870 -8.524 1.00159.17 O ATOM 99 N ASP 14 47.641 19.831 -13.182 1.00 57.93 N ATOM 100 CA ASP 14 47.622 19.212 -14.474 1.00 57.93 C ATOM 101 C ASP 14 47.261 17.770 -14.324 1.00 57.93 C ATOM 102 O ASP 14 47.816 16.905 -15.000 1.00 57.93 O ATOM 103 CB ASP 14 48.976 19.275 -15.207 1.00 57.93 C ATOM 104 CG ASP 14 49.255 20.707 -15.648 1.00 57.93 C ATOM 105 OD1 ASP 14 48.286 21.415 -16.028 1.00 57.93 O ATOM 106 OD2 ASP 14 50.449 21.102 -15.608 1.00 57.93 O ATOM 107 N GLY 15 46.302 17.467 -13.437 1.00 13.97 N ATOM 108 CA GLY 15 45.907 16.103 -13.288 1.00 13.97 C ATOM 109 C GLY 15 44.605 16.108 -12.576 1.00 13.97 C ATOM 110 O GLY 15 44.214 17.109 -11.975 1.00 13.97 O ATOM 111 N VAL 16 43.884 14.976 -12.628 1.00104.51 N ATOM 112 CA VAL 16 42.654 14.926 -11.913 1.00104.51 C ATOM 113 C VAL 16 42.998 14.703 -10.476 1.00104.51 C ATOM 114 O VAL 16 43.545 13.667 -10.102 1.00104.51 O ATOM 115 CB VAL 16 41.740 13.830 -12.386 1.00104.51 C ATOM 116 CG1 VAL 16 42.533 12.518 -12.523 1.00104.51 C ATOM 117 CG2 VAL 16 40.592 13.725 -11.373 1.00104.51 C ATOM 118 N HIS 17 42.684 15.691 -9.615 1.00116.78 N ATOM 119 CA HIS 17 43.004 15.529 -8.231 1.00116.78 C ATOM 120 C HIS 17 41.767 15.236 -7.454 1.00116.78 C ATOM 121 O HIS 17 40.770 15.952 -7.549 1.00116.78 O ATOM 122 CB HIS 17 43.731 16.724 -7.588 1.00116.78 C ATOM 123 CG HIS 17 45.226 16.597 -7.687 1.00116.78 C ATOM 124 ND1 HIS 17 46.032 16.331 -6.604 1.00116.78 N ATOM 125 CD2 HIS 17 46.056 16.669 -8.761 1.00116.78 C ATOM 126 CE1 HIS 17 47.301 16.253 -7.070 1.00116.78 C ATOM 127 NE2 HIS 17 47.367 16.450 -8.375 1.00116.78 N ATOM 128 N LYS 18 41.813 14.130 -6.679 1.00120.73 N ATOM 129 CA LYS 18 40.713 13.756 -5.845 1.00120.73 C ATOM 130 C LYS 18 40.841 14.504 -4.559 1.00120.73 C ATOM 131 O LYS 18 41.927 14.679 -4.006 1.00120.73 O ATOM 132 CB LYS 18 40.604 12.246 -5.527 1.00120.73 C ATOM 133 CG LYS 18 40.123 11.381 -6.698 1.00120.73 C ATOM 134 CD LYS 18 40.244 9.872 -6.449 1.00120.73 C ATOM 135 CE LYS 18 41.686 9.357 -6.436 1.00120.73 C ATOM 136 NZ LYS 18 41.725 7.937 -6.014 1.00120.73 N ATOM 137 N ILE 19 39.677 14.949 -4.068 1.00165.70 N ATOM 138 CA ILE 19 39.494 15.803 -2.936 1.00165.70 C ATOM 139 C ILE 19 38.657 15.060 -1.940 1.00165.70 C ATOM 140 O ILE 19 37.584 14.577 -2.297 1.00165.70 O ATOM 141 CB ILE 19 38.539 16.870 -3.336 1.00165.70 C ATOM 142 CG1 ILE 19 39.056 17.764 -4.479 1.00165.70 C ATOM 143 CG2 ILE 19 38.011 17.497 -2.073 1.00165.70 C ATOM 144 CD1 ILE 19 40.346 18.507 -4.200 1.00165.70 C ATOM 145 N GLU 20 39.105 14.964 -0.672 1.00108.02 N ATOM 146 CA GLU 20 38.271 14.361 0.329 1.00108.02 C ATOM 147 C GLU 20 38.258 15.218 1.554 1.00108.02 C ATOM 148 O GLU 20 39.290 15.728 1.990 1.00108.02 O ATOM 149 CB GLU 20 38.706 12.957 0.790 1.00108.02 C ATOM 150 CG GLU 20 37.740 12.338 1.808 1.00108.02 C ATOM 151 CD GLU 20 38.065 10.853 1.947 1.00108.02 C ATOM 152 OE1 GLU 20 39.193 10.457 1.558 1.00108.02 O ATOM 153 OE2 GLU 20 37.184 10.098 2.438 1.00108.02 O ATOM 154 N PHE 21 37.048 15.380 2.125 1.00 81.87 N ATOM 155 CA PHE 21 36.800 16.106 3.338 1.00 81.87 C ATOM 156 C PHE 21 36.459 15.078 4.367 1.00 81.87 C ATOM 157 O PHE 21 35.449 14.385 4.249 1.00 81.87 O ATOM 158 CB PHE 21 35.572 17.030 3.222 1.00 81.87 C ATOM 159 CG PHE 21 35.170 17.468 4.591 1.00 81.87 C ATOM 160 CD1 PHE 21 35.779 18.545 5.188 1.00 81.87 C ATOM 161 CD2 PHE 21 34.178 16.801 5.280 1.00 81.87 C ATOM 162 CE1 PHE 21 35.408 18.948 6.448 1.00 81.87 C ATOM 163 CE2 PHE 21 33.804 17.199 6.544 1.00 81.87 C ATOM 164 CZ PHE 21 34.421 18.276 7.132 1.00 81.87 C ATOM 165 N GLU 22 37.306 14.945 5.404 1.00 95.42 N ATOM 166 CA GLU 22 37.042 13.983 6.435 1.00 95.42 C ATOM 167 C GLU 22 36.068 14.646 7.362 1.00 95.42 C ATOM 168 O GLU 22 36.245 15.805 7.730 1.00 95.42 O ATOM 169 CB GLU 22 38.298 13.609 7.233 1.00 95.42 C ATOM 170 CG GLU 22 39.454 13.126 6.352 1.00 95.42 C ATOM 171 CD GLU 22 39.347 11.631 6.078 1.00 95.42 C ATOM 172 OE1 GLU 22 38.219 11.073 6.119 1.00 95.42 O ATOM 173 OE2 GLU 22 40.424 11.034 5.818 1.00 95.42 O ATOM 174 N HIS 23 35.006 13.925 7.753 1.00127.47 N ATOM 175 CA HIS 23 33.957 14.514 8.535 1.00127.47 C ATOM 176 C HIS 23 34.392 14.896 9.915 1.00127.47 C REMARK ATOM 177 O HIS 23 10.828 -1.349 -8.671 1.00127.47 ATOM 178 CB HIS 23 32.779 13.550 8.717 1.00127.47 C ATOM 179 CG HIS 23 31.495 14.187 9.157 1.00127.47 C ATOM 180 ND1 HIS 23 30.424 14.407 8.319 1.00127.47 N REMARK ATOM 181 CD2 HIS 23 10.302 -3.291 -11.449 1.00127.47 ATOM 182 CE1 HIS 23 29.436 14.945 9.084 1.00127.47 C ATOM 183 NE2 HIS 23 29.803 15.085 10.344 1.00127.47 N ATOM 184 N GLY 24 34.973 13.948 10.673 1.00 42.48 N ATOM 185 CA GLY 24 35.247 14.268 12.045 1.00 42.48 C ATOM 186 C GLY 24 36.281 15.339 12.140 1.00 42.48 C ATOM 187 O GLY 24 36.103 16.341 12.830 1.00 42.48 O ATOM 188 N THR 25 37.387 15.129 11.414 1.00 69.22 N ATOM 189 CA THR 25 38.538 15.982 11.419 1.00 69.22 C ATOM 190 C THR 25 38.200 17.272 10.754 1.00 69.22 C ATOM 191 O THR 25 38.794 18.302 11.062 1.00 69.22 O ATOM 192 CB THR 25 39.721 15.333 10.763 1.00 69.22 C ATOM 193 OG1 THR 25 39.409 14.940 9.431 1.00 69.22 O ATOM 194 CG2 THR 25 40.119 14.104 11.599 1.00 69.22 C ATOM 195 N THR 26 37.238 17.218 9.810 1.00219.70 N ATOM 196 CA THR 26 36.765 18.319 9.019 1.00219.70 C ATOM 197 C THR 26 38.200 17.272 10.754 1.00 69.22 C ATOM 198 O THR 26 38.794 18.302 11.062 1.00 69.22 O ATOM 199 CB THR 26 36.319 19.542 9.784 1.00219.70 C ATOM 200 OG1 THR 26 37.426 20.306 10.239 1.00219.70 O ATOM 201 CG2 THR 26 35.492 19.072 10.988 1.00219.70 C ATOM 202 N SER 27 38.856 17.843 7.951 1.00148.62 N ATOM 203 CA SER 27 39.885 18.205 7.044 1.00148.62 C ATOM 204 C SER 27 39.142 18.342 5.744 1.00148.62 C ATOM 205 O SER 27 38.650 17.352 5.208 1.00148.62 O ATOM 206 CB SER 27 40.967 17.112 6.962 1.00148.62 C ATOM 207 OG SER 27 40.423 15.919 6.421 1.00148.62 O ATOM 208 N GLY 28 39.055 19.573 5.193 1.00147.54 N ATOM 209 CA GLY 28 38.250 19.825 4.023 1.00147.54 C ATOM 210 C GLY 28 39.050 19.348 2.866 1.00147.54 C ATOM 211 O GLY 28 39.836 18.417 3.030 1.00147.54 O ATOM 212 N LYS 29 38.900 19.911 1.647 1.00289.83 N ATOM 213 CA LYS 29 39.878 19.379 0.750 1.00289.83 C ATOM 214 C LYS 29 39.995 20.135 -0.535 1.00289.83 C ATOM 215 O LYS 29 39.471 19.711 -1.558 1.00289.83 O ATOM 216 CB LYS 29 39.599 17.920 0.353 1.00289.83 C ATOM 217 CG LYS 29 40.790 17.171 -0.238 1.00289.83 C ATOM 218 CD LYS 29 41.348 17.697 -1.555 1.00289.83 C ATOM 219 CE LYS 29 42.388 16.752 -2.165 1.00289.83 C ATOM 220 NZ LYS 29 42.874 17.265 -3.462 1.00289.83 N ATOM 221 N ARG 30 40.623 21.311 -0.591 1.00208.84 N ATOM 222 CA ARG 30 40.949 21.525 -1.964 1.00208.84 C ATOM 223 C ARG 30 42.101 20.589 -2.096 1.00208.84 C ATOM 224 O ARG 30 42.380 19.991 -3.135 1.00208.84 O ATOM 225 CB ARG 30 41.464 22.913 -2.355 1.00208.84 C ATOM 226 CG ARG 30 41.495 23.137 -3.867 1.00208.84 C ATOM 227 CD ARG 30 41.122 21.883 -4.653 1.00208.84 C ATOM 228 NE ARG 30 41.185 22.196 -6.101 1.00208.84 N ATOM 229 CZ ARG 30 42.330 21.937 -6.796 1.00208.84 C ATOM 230 NH1 ARG 30 43.369 21.312 -6.174 1.00208.84 H ATOM 231 NH2 ARG 30 42.424 22.285 -8.114 1.00208.84 H ATOM 232 N VAL 31 42.836 20.463 -0.976 1.00149.80 N ATOM 233 CA VAL 31 44.016 19.659 -0.960 1.00149.80 C ATOM 234 C VAL 31 44.102 18.983 0.367 1.00149.80 C ATOM 235 O VAL 31 45.027 18.205 0.598 1.00149.80 O ATOM 236 CB VAL 31 45.219 20.539 -1.021 1.00149.80 C ATOM 237 CG1 VAL 31 45.187 21.430 0.238 1.00149.80 C ATOM 238 CG2 VAL 31 46.493 19.693 -1.180 1.00149.80 C ATOM 239 N VAL 32 43.125 19.226 1.264 1.00335.02 N ATOM 240 CA VAL 32 43.312 18.739 2.586 1.00335.02 C ATOM 241 C VAL 32 43.360 17.266 2.661 1.00335.02 C ATOM 242 O VAL 32 44.113 16.727 3.467 1.00335.02 O ATOM 243 CB VAL 32 42.621 19.512 3.651 1.00335.02 C ATOM 244 CG1 VAL 32 41.685 20.516 2.981 1.00335.02 C ATOM 245 CG2 VAL 32 42.016 18.547 4.649 1.00335.02 C ATOM 246 N TYR 33 42.555 16.564 1.852 1.00105.63 N ATOM 247 CA TYR 33 42.850 15.178 1.706 1.00105.63 C ATOM 248 C TYR 33 43.250 15.078 0.263 1.00105.63 C ATOM 249 O TYR 33 42.521 14.532 -0.567 1.00105.63 O ATOM 250 CB TYR 33 41.646 14.248 1.977 1.00105.63 C ATOM 251 CG TYR 33 42.194 12.883 2.239 1.00105.63 C ATOM 252 CD1 TYR 33 42.667 12.574 3.494 1.00105.63 C ATOM 253 CD2 TYR 33 42.248 11.921 1.256 1.00105.63 C ATOM 254 CE1 TYR 33 43.186 11.332 3.771 1.00105.63 C ATOM 255 CE2 TYR 33 42.767 10.673 1.529 1.00105.63 C ATOM 256 CZ TYR 33 43.236 10.377 2.789 1.00105.63 C ATOM 257 OH TYR 33 43.772 9.105 3.082 1.00105.63 H ATOM 258 N VAL 34 44.453 15.613 -0.048 1.00132.85 N ATOM 259 CA VAL 34 45.019 15.657 -1.371 1.00132.85 C ATOM 260 C VAL 34 45.643 14.330 -1.592 1.00132.85 C ATOM 261 O VAL 34 45.813 13.568 -0.646 1.00132.85 O ATOM 262 CB VAL 34 46.139 16.649 -1.537 1.00132.85 C ATOM 263 CG1 VAL 34 47.352 16.152 -0.730 1.00132.85 C ATOM 264 CG2 VAL 34 46.442 16.811 -3.039 1.00132.85 C ATOM 265 N ASP 35 46.002 14.027 -2.856 1.00111.74 N ATOM 266 CA ASP 35 46.550 12.759 -3.229 1.00111.74 C ATOM 267 C ASP 35 47.706 12.407 -2.343 1.00111.74 C ATOM 268 O ASP 35 48.839 12.824 -2.572 1.00111.74 O ATOM 269 CB ASP 35 47.080 12.740 -4.675 1.00111.74 C ATOM 270 CG ASP 35 45.906 12.952 -5.622 1.00111.74 C ATOM 271 OD1 ASP 35 44.749 12.720 -5.180 1.00111.74 O ATOM 272 OD2 ASP 35 46.142 13.351 -6.795 1.00111.74 O ATOM 273 N GLY 36 47.425 11.621 -1.287 1.00 57.13 N ATOM 274 CA GLY 36 48.471 11.083 -0.474 1.00 57.13 C ATOM 275 C GLY 36 48.731 11.842 0.791 1.00 57.13 C ATOM 276 O GLY 36 49.197 11.246 1.762 1.00 57.13 O ATOM 277 N LYS 37 48.457 13.160 0.873 1.00 77.13 N ATOM 278 CA LYS 37 48.845 13.722 2.138 1.00 77.13 C ATOM 279 C LYS 37 47.803 14.661 2.656 1.00 77.13 C ATOM 280 O LYS 37 47.197 15.431 1.914 1.00 77.13 O ATOM 281 CB LYS 37 50.206 14.447 2.104 1.00 77.13 C ATOM 282 CG LYS 37 50.724 14.787 3.505 1.00 77.13 C ATOM 283 CD LYS 37 52.187 15.232 3.579 1.00 77.13 C ATOM 284 CE LYS 37 52.350 16.505 4.416 1.00 77.13 C ATOM 285 NZ LYS 37 53.769 16.736 4.761 1.00 77.13 N ATOM 286 N GLU 38 47.567 14.605 3.981 1.00 88.11 N ATOM 287 CA GLU 38 46.563 15.463 4.527 1.00 88.11 C ATOM 288 C GLU 38 47.124 16.837 4.636 1.00 88.11 C ATOM 289 O GLU 38 48.117 17.076 5.321 1.00 88.11 O ATOM 290 CB GLU 38 46.020 14.991 5.891 1.00 88.11 C ATOM 291 CG GLU 38 47.079 14.798 6.977 1.00 88.11 C ATOM 292 CD GLU 38 46.459 13.909 8.044 1.00 88.11 C ATOM 293 OE1 GLU 38 46.013 12.788 7.680 1.00 88.11 O ATOM 294 OE2 GLU 38 46.419 14.335 9.228 1.00 88.11 O ATOM 295 N GLU 39 46.469 17.792 3.943 1.00117.62 N ATOM 296 CA GLU 39 46.934 19.147 3.963 1.00117.62 C ATOM 297 CB GLU 39 46.573 20.031 2.759 1.00117.62 C ATOM 298 CG GLU 39 47.615 19.929 1.643 1.00117.62 C ATOM 299 CD GLU 39 48.958 20.280 2.286 1.00117.62 C ATOM 300 OE1 GLU 39 48.948 21.083 3.255 1.00117.62 O ATOM 301 OE2 GLU 39 50.004 19.743 1.833 1.00117.62 O ATOM 302 C GLU 39 46.478 19.821 5.206 1.00117.62 C ATOM 303 O GLU 39 45.725 19.256 5.997 1.00117.62 O ATOM 304 N ILE 40 46.975 21.050 5.423 1.00107.83 N ATOM 305 CA ILE 40 46.627 21.739 6.625 1.00107.83 C ATOM 306 CB ILE 40 47.812 22.195 7.446 1.00107.83 C ATOM 307 CG2 ILE 40 48.658 23.178 6.619 1.00107.83 C ATOM 308 CG1 ILE 40 47.355 22.718 8.823 1.00107.83 C ATOM 309 CD1 ILE 40 48.489 22.808 9.852 1.00107.83 C ATOM 310 C ILE 40 45.780 22.907 6.272 1.00107.83 C ATOM 311 O ILE 40 45.990 23.572 5.258 1.00107.83 O ATOM 312 N ARG 41 44.755 23.132 7.113 1.00137.56 N ATOM 313 CA ARG 41 43.826 24.206 6.921 1.00137.56 C ATOM 314 CB ARG 41 42.344 23.804 6.871 1.00137.56 C ATOM 315 CG ARG 41 41.980 22.730 5.853 1.00137.56 C ATOM 316 CD ARG 41 42.030 21.324 6.436 1.00137.56 C ATOM 317 NE ARG 41 40.828 21.222 7.311 1.00137.56 N ATOM 318 CZ ARG 41 40.899 21.619 8.613 1.00137.56 C ATOM 319 NH1 ARG 41 42.086 22.053 9.134 1.00137.56 H ATOM 320 NH2 ARG 41 39.791 21.579 9.409 1.00137.56 H ATOM 321 C ARG 41 43.919 25.063 8.138 1.00137.56 C ATOM 322 O ARG 41 44.719 24.795 9.032 1.00137.56 O ATOM 323 N LYS 42 43.146 26.169 8.151 1.00169.58 N ATOM 324 CA LYS 42 43.072 27.052 9.282 1.00169.58 C ATOM 325 CB LYS 42 42.342 28.376 8.990 1.00169.58 C ATOM 326 CG LYS 42 42.366 29.365 10.161 1.00169.58 C ATOM 327 CD LYS 42 43.730 30.013 10.411 1.00169.58 C ATOM 328 CE LYS 42 44.818 29.015 10.812 1.00169.58 C ATOM 329 NZ LYS 42 46.093 29.722 11.073 1.00169.58 N ATOM 330 C LYS 42 42.331 26.385 10.404 1.00169.58 C ATOM 331 O LYS 42 42.720 26.516 11.563 1.00169.58 O ATOM 332 N GLU 43 41.245 25.647 10.083 1.00261.78 N ATOM 333 CA GLU 43 40.403 24.987 11.047 1.00261.78 C ATOM 334 CB GLU 43 41.050 23.736 11.701 1.00261.78 C ATOM 335 CG GLU 43 42.430 23.918 12.340 1.00261.78 C ATOM 336 CD GLU 43 42.891 22.575 12.881 1.00261.78 C ATOM 337 OE1 GLU 43 42.022 21.809 13.372 1.00261.78 O ATOM 338 OE2 GLU 43 44.119 22.297 12.817 1.00261.78 O ATOM 339 C GLU 43 39.890 25.942 12.088 1.00261.78 C ATOM 340 O GLU 43 39.956 25.666 13.286 1.00261.78 O ATOM 341 N TRP 44 39.315 27.087 11.661 1.00113.79 N ATOM 342 CA TRP 44 38.822 27.984 12.667 1.00113.79 C ATOM 343 CB TRP 44 39.115 29.482 12.433 1.00113.79 C ATOM 344 CG TRP 44 38.893 30.312 13.679 1.00113.79 C ATOM 345 CD2 TRP 44 38.868 31.751 13.738 1.00113.79 C ATOM 346 CD1 TRP 44 38.714 29.879 14.962 1.00113.79 C ATOM 347 NE1 TRP 44 38.595 30.948 15.814 1.00113.79 N ATOM 348 CE2 TRP 44 38.685 32.111 15.077 1.00113.79 C ATOM 349 CE3 TRP 44 38.988 32.696 12.760 1.00113.79 C ATOM 350 CZ2 TRP 44 38.621 33.423 15.455 1.00113.79 C ATOM 351 CZ3 TRP 44 38.924 34.019 13.148 1.00113.79 C ATOM 352 CH2 TRP 44 38.746 34.376 14.468 1.00113.79 H ATOM 353 C TRP 44 37.338 27.840 12.758 1.00113.79 C ATOM 354 O TRP 44 36.635 27.671 11.761 1.00113.79 O ATOM 355 N MET 45 36.830 27.891 14.003 1.00148.88 N ATOM 356 CA MET 45 35.434 27.752 14.277 1.00148.88 C ATOM 357 CB MET 45 35.161 27.111 15.653 1.00148.88 C ATOM 358 CG MET 45 35.857 27.812 16.824 1.00148.88 C ATOM 359 SD MET 45 37.669 27.661 16.817 1.00148.88 S ATOM 360 CE MET 45 37.644 25.856 16.638 1.00148.88 C ATOM 361 C MET 45 34.817 29.109 14.272 1.00148.88 C ATOM 362 O MET 45 35.414 30.087 14.719 1.00148.88 O ATOM 363 N PHE 46 33.585 29.189 13.746 1.00 93.48 N ATOM 364 CA PHE 46 32.892 30.440 13.659 1.00 93.48 C ATOM 365 CB PHE 46 32.597 30.846 12.206 1.00 93.48 C ATOM 366 CG PHE 46 33.884 31.184 11.532 1.00 93.48 C ATOM 367 CD1 PHE 46 34.856 30.228 11.351 1.00 93.48 C ATOM 368 CD2 PHE 46 34.100 32.452 11.042 1.00 93.48 C ATOM 369 CE1 PHE 46 36.042 30.529 10.722 1.00 93.48 C ATOM 370 CE2 PHE 46 35.281 32.760 10.410 1.00 93.48 C ATOM 371 CZ PHE 46 36.254 31.801 10.250 1.00 93.48 C ATOM 372 C PHE 46 31.554 30.243 14.296 1.00 93.48 C ATOM 373 O PHE 46 31.098 29.115 14.473 1.00 93.48 O ATOM 374 N LYS 47 30.891 31.355 14.667 1.00101.18 N ATOM 375 CA LYS 47 29.573 31.255 15.213 1.00101.18 C ATOM 376 CB LYS 47 28.960 32.609 15.606 1.00101.18 C ATOM 377 CG LYS 47 29.653 33.246 16.807 1.00101.18 C ATOM 378 CD LYS 47 31.045 33.801 16.496 1.00101.18 C ATOM 379 CE LYS 47 31.749 34.389 17.720 1.00101.18 C ATOM 380 NZ LYS 47 30.999 35.559 18.232 1.00101.18 N ATOM 381 C LYS 47 28.745 30.682 14.120 1.00101.18 C ATOM 382 O LYS 47 27.786 29.947 14.354 1.00101.18 O ATOM 383 N LEU 48 29.121 31.022 12.878 1.00127.83 N ATOM 384 CA LEU 48 28.423 30.569 11.720 1.00127.83 C ATOM 385 CB LEU 48 28.609 31.518 10.526 1.00127.83 C ATOM 386 CG LEU 48 27.995 32.914 10.778 1.00127.83 C ATOM 387 CD1 LEU 48 26.480 32.809 11.008 1.00127.83 C ATOM 388 CD2 LEU 48 28.719 33.676 11.902 1.00127.83 C ATOM 389 C LEU 48 28.957 29.213 11.391 1.00127.83 C ATOM 390 O LEU 48 28.779 28.274 12.163 1.00127.83 O ATOM 391 N VAL 49 29.634 29.062 10.242 1.00 99.12 N ATOM 392 CA VAL 49 30.057 27.747 9.843 1.00 99.12 C ATOM 393 CB VAL 49 29.653 27.435 8.441 1.00 99.12 C ATOM 394 CG1 VAL 49 29.752 25.915 8.204 1.00 99.12 C ATOM 395 CG2 VAL 49 28.268 28.057 8.217 1.00 99.12 C ATOM 396 C VAL 49 31.558 27.709 9.952 1.00 99.12 C ATOM 397 O VAL 49 32.151 28.548 10.629 1.00 99.12 O ATOM 398 N GLY 50 32.206 26.697 9.328 1.00138.82 N ATOM 399 CA GLY 50 33.633 26.545 9.452 1.00138.82 C ATOM 400 C GLY 50 34.314 26.919 8.173 1.00138.82 C ATOM 401 O GLY 50 33.859 26.595 7.076 1.00138.82 O ATOM 402 N LYS 51 35.459 27.618 8.293 1.00124.03 N ATOM 403 CA LYS 51 36.179 27.987 7.110 1.00124.03 C ATOM 404 CB LYS 51 36.561 29.472 7.032 1.00124.03 C ATOM 405 CG LYS 51 35.363 30.405 6.874 1.00124.03 C ATOM 406 CD LYS 51 34.486 30.041 5.676 1.00124.03 C ATOM 407 CE LYS 51 33.334 31.015 5.438 1.00124.03 C ATOM 408 NZ LYS 51 32.323 30.391 4.553 1.00124.03 N ATOM 409 C LYS 51 37.471 27.253 7.133 1.00124.03 C ATOM 410 O LYS 51 38.269 27.404 8.054 1.00124.03 O ATOM 411 N GLU 52 37.729 26.430 6.109 1.00105.66 N ATOM 412 CA GLU 52 39.002 25.786 6.142 1.00105.66 C ATOM 413 CB GLU 52 38.958 24.273 5.851 1.00105.66 C ATOM 414 CG GLU 52 38.504 23.441 7.058 1.00105.66 C ATOM 415 CD GLU 52 37.044 23.765 7.343 1.00105.66 C ATOM 416 OE1 GLU 52 36.315 24.110 6.375 1.00105.66 O ATOM 417 OE2 GLU 52 36.632 23.670 8.530 1.00105.66 O ATOM 418 C GLU 52 39.876 26.446 5.133 1.00105.66 C ATOM 419 O GLU 52 39.631 26.357 3.930 1.00105.66 O ATOM 420 N THR 53 40.929 27.148 5.597 1.00122.26 N ATOM 421 CA THR 53 41.775 27.742 4.610 1.00122.26 C ATOM 422 CB THR 53 42.085 29.201 4.822 1.00122.26 C ATOM 423 OG1 THR 53 42.764 29.714 3.688 1.00122.26 O ATOM 424 CG2 THR 53 42.930 29.398 6.092 1.00122.26 C ATOM 425 C THR 53 43.036 26.945 4.545 1.00122.26 C ATOM 426 O THR 53 43.828 26.884 5.484 1.00122.26 O ATOM 427 N PHE 54 43.217 26.271 3.397 1.00110.71 N ATOM 428 CA PHE 54 44.372 25.478 3.127 1.00110.71 C ATOM 429 CB PHE 54 44.062 23.966 3.016 1.00110.71 C ATOM 430 CG PHE 54 42.750 23.844 2.318 1.00110.71 C ATOM 431 CD1 PHE 54 42.624 24.030 0.966 1.00110.71 C ATOM 432 CD2 PHE 54 41.626 23.538 3.047 1.00110.71 C ATOM 433 CE1 PHE 54 41.385 23.916 0.384 1.00110.71 C ATOM 434 CE2 PHE 54 40.388 23.419 2.464 1.00110.71 C ATOM 435 CZ PHE 54 40.264 23.613 1.114 1.00110.71 C ATOM 436 C PHE 54 45.014 26.017 1.897 1.00110.71 C ATOM 437 O PHE 54 44.372 26.626 1.043 1.00110.71 O ATOM 438 N TYR 55 46.339 25.841 1.797 1.00 64.27 N ATOM 439 CA TYR 55 47.020 26.426 0.688 1.00 64.27 C ATOM 440 CB TYR 55 48.214 27.270 1.157 1.00 64.27 C ATOM 441 CG TYR 55 47.617 28.387 1.954 1.00 64.27 C ATOM 442 CD1 TYR 55 47.126 28.175 3.227 1.00 64.27 C ATOM 443 CD2 TYR 55 47.548 29.653 1.426 1.00 64.27 C ATOM 444 CE1 TYR 55 46.575 29.207 3.953 1.00 64.27 C ATOM 445 CE2 TYR 55 47.001 30.690 2.144 1.00 64.27 C ATOM 446 CZ TYR 55 46.513 30.470 3.409 1.00 64.27 C ATOM 447 OH TYR 55 45.952 31.536 4.139 1.00 64.27 H ATOM 448 C TYR 55 47.480 25.318 -0.191 1.00 64.27 C ATOM 449 O TYR 55 48.033 24.326 0.281 1.00 64.27 O ATOM 450 N VAL 56 47.206 25.440 -1.506 1.00 60.00 N ATOM 451 CA VAL 56 47.617 24.415 -2.416 1.00 60.00 C ATOM 452 CB VAL 56 46.461 23.849 -3.185 1.00 60.00 C ATOM 453 CG1 VAL 56 46.990 22.795 -4.172 1.00 60.00 C ATOM 454 CG2 VAL 56 45.424 23.309 -2.185 1.00 60.00 C ATOM 455 C VAL 56 48.565 25.005 -3.405 1.00 60.00 C ATOM 456 O VAL 56 48.153 25.624 -4.386 1.00 60.00 O ATOM 457 N GLY 57 49.878 24.807 -3.176 1.00 32.51 N ATOM 458 CA GLY 57 50.864 25.261 -4.112 1.00 32.51 C ATOM 459 C GLY 57 50.668 26.716 -4.394 1.00 32.51 C ATOM 460 O GLY 57 50.516 27.544 -3.498 1.00 32.51 O ATOM 461 N ALA 58 50.686 27.047 -5.699 1.00 38.71 N ATOM 462 CA ALA 58 50.573 28.390 -6.195 1.00 38.71 C ATOM 463 CB ALA 58 50.783 28.481 -7.715 1.00 38.71 C ATOM 464 C ALA 58 49.222 28.972 -5.892 1.00 38.71 C ATOM 465 O ALA 58 49.118 30.163 -5.605 1.00 38.71 O ATOM 466 N ALA 59 48.151 28.156 -5.971 1.00 47.16 N ATOM 467 CA ALA 59 46.816 28.669 -5.832 1.00 47.16 C ATOM 468 CB ALA 59 45.769 27.876 -6.636 1.00 47.16 C ATOM 469 C ALA 59 46.358 28.688 -4.405 1.00 47.16 C ATOM 470 O ALA 59 46.865 27.948 -3.563 1.00 47.16 O ATOM 471 N LYS 60 45.385 29.584 -4.112 1.00 74.56 N ATOM 472 CA LYS 60 44.772 29.668 -2.815 1.00 74.56 C ATOM 473 CB LYS 60 44.508 31.105 -2.307 1.00 74.56 C ATOM 474 CG LYS 60 45.729 31.967 -1.969 1.00 74.56 C ATOM 475 CD LYS 60 45.358 33.448 -1.805 1.00 74.56 C ATOM 476 CE LYS 60 46.524 34.380 -1.458 1.00 74.56 C ATOM 477 NZ LYS 60 46.594 34.610 0.004 1.00 74.56 N ATOM 478 C LYS 60 43.412 29.054 -2.959 1.00 74.56 C ATOM 479 O LYS 60 42.599 29.481 -3.778 1.00 74.56 O ATOM 480 N THR 61 43.122 28.025 -2.148 1.00 74.27 N ATOM 481 CA THR 61 41.861 27.355 -2.231 1.00 74.27 C ATOM 482 CB THR 61 42.019 25.980 -2.775 1.00 74.27 C ATOM 483 OG1 THR 61 42.908 25.245 -1.949 1.00 74.27 O ATOM 484 CG2 THR 61 42.628 26.116 -4.172 1.00 74.27 C ATOM 485 C THR 61 41.335 27.254 -0.837 1.00 74.27 C ATOM 486 O THR 61 42.040 27.572 0.120 1.00 74.27 O ATOM 487 N LYS 62 40.056 26.856 -0.692 1.00131.07 N ATOM 488 CA LYS 62 39.505 26.732 0.623 1.00131.07 C ATOM 489 CB LYS 62 39.206 28.092 1.272 1.00131.07 C ATOM 490 CG LYS 62 38.159 28.907 0.511 1.00131.07 C ATOM 491 CD LYS 62 37.705 30.150 1.276 1.00131.07 C ATOM 492 CE LYS 62 36.845 31.103 0.448 1.00131.07 C ATOM 493 NZ LYS 62 37.628 31.625 -0.695 1.00131.07 N ATOM 494 C LYS 62 38.204 26.003 0.541 1.00131.07 C ATOM 495 O LYS 62 37.496 26.078 -0.463 1.00131.07 O ATOM 496 N ALA 63 37.860 25.266 1.616 1.00 60.24 N ATOM 497 CA ALA 63 36.604 24.584 1.627 1.00 60.24 C ATOM 498 CB ALA 63 36.663 23.207 2.321 1.00 60.24 C ATOM 499 C ALA 63 35.665 25.448 2.408 1.00 60.24 C ATOM 500 O ALA 63 35.791 25.602 3.622 1.00 60.24 O ATOM 501 N THR 64 34.670 26.024 1.716 1.00149.85 N ATOM 502 CA THR 64 33.761 26.879 2.399 1.00149.85 C ATOM 503 CB THR 64 33.320 28.065 1.581 1.00149.85 C ATOM 504 OG1 THR 64 32.204 28.692 2.190 1.00149.85 O ATOM 505 CG2 THR 64 33.043 27.672 0.127 1.00149.85 C ATOM 506 C THR 64 32.624 26.055 2.887 1.00149.85 C ATOM 507 O THR 64 31.944 25.359 2.135 1.00149.85 O ATOM 508 N ILE 65 32.411 26.124 4.209 1.00122.06 N ATOM 509 CA ILE 65 31.448 25.259 4.800 1.00122.06 C ATOM 510 CB ILE 65 32.006 24.511 5.962 1.00122.06 C ATOM 511 CG2 ILE 65 30.958 23.466 6.360 1.00122.06 C ATOM 512 CG1 ILE 65 33.375 23.913 5.588 1.00122.06 C ATOM 513 CD1 ILE 65 33.361 23.110 4.289 1.00122.06 C ATOM 514 C ILE 65 30.352 26.117 5.333 1.00122.06 C ATOM 515 O ILE 65 30.618 27.197 5.858 1.00122.06 O ATOM 516 N ASN 66 29.082 25.682 5.174 1.00116.19 N ATOM 517 CA ASN 66 28.009 26.438 5.755 1.00116.19 C ATOM 518 CB ASN 66 27.158 27.272 4.775 1.00116.19 C ATOM 519 CG ASN 66 26.339 26.348 3.883 1.00116.19 C ATOM 520 OD1 ASN 66 25.116 26.454 3.812 1.00116.19 O ATOM 521 ND2 ASN 66 27.035 25.424 3.172 1.00116.19 N ATOM 522 C ASN 66 27.079 25.482 6.419 1.00116.19 C ATOM 523 O ASN 66 26.805 24.390 5.922 1.00116.19 O ATOM 524 N ILE 67 26.570 25.910 7.580 1.00164.66 N ATOM 525 CA ILE 67 25.698 25.131 8.391 1.00164.66 C ATOM 526 CB ILE 67 26.252 24.965 9.783 1.00164.66 C ATOM 527 CG2 ILE 67 26.643 26.361 10.292 1.00164.66 C ATOM 528 CG1 ILE 67 25.294 24.223 10.723 1.00164.66 C ATOM 529 CD1 ILE 67 24.204 25.145 11.260 1.00164.66 C ATOM 530 C ILE 67 24.349 25.780 8.406 1.00164.66 C ATOM 531 O ILE 67 24.211 26.957 8.741 1.00164.66 O ATOM 532 N ASP 68 23.322 25.013 7.979 1.00 95.03 N ATOM 533 CA ASP 68 21.978 25.499 8.062 1.00 95.03 C ATOM 534 CB ASP 68 21.111 25.249 6.806 1.00 95.03 C ATOM 535 CG ASP 68 21.734 25.947 5.605 1.00 95.03 C ATOM 536 OD1 ASP 68 22.829 26.547 5.767 1.00 95.03 O ATOM 537 OD2 ASP 68 21.125 25.876 4.504 1.00 95.03 O ATOM 538 C ASP 68 21.348 24.755 9.198 1.00 95.03 C ATOM 539 O ASP 68 22.007 23.960 9.869 1.00 95.03 O ATOM 540 N ALA 69 20.054 25.035 9.450 1.00240.71 N ATOM 541 CA ALA 69 19.292 24.399 10.491 1.00240.71 C ATOM 542 CB ALA 69 19.640 22.922 10.753 1.00240.71 C ATOM 543 C ALA 69 19.472 25.189 11.744 1.00240.71 C ATOM 544 O ALA 69 20.235 26.154 11.776 1.00240.71 O ATOM 545 N ILE 70 18.723 24.832 12.806 1.00148.81 N ATOM 546 CA ILE 70 18.861 25.592 14.016 1.00148.81 C ATOM 547 CB ILE 70 17.940 25.162 15.125 1.00148.81 C ATOM 548 CG2 ILE 70 18.091 26.222 16.233 1.00148.81 C ATOM 549 CG1 ILE 70 16.484 24.982 14.645 1.00148.81 C ATOM 550 CD1 ILE 70 15.853 26.199 13.971 1.00148.81 C ATOM 551 C ILE 70 20.240 25.310 14.517 1.00148.81 C ATOM 552 O ILE 70 21.030 26.212 14.788 1.00148.81 O ATOM 553 N SER 71 20.540 24.002 14.597 1.00169.79 N ATOM 554 CA SER 71 21.782 23.468 15.065 1.00169.79 C ATOM 555 CB SER 71 21.620 22.122 15.798 1.00169.79 C ATOM 556 OG SER 71 20.808 22.277 16.953 1.00169.79 O ATOM 557 C SER 71 22.582 23.208 13.848 1.00169.79 C ATOM 558 O SER 71 22.395 23.884 12.842 1.00169.79 O ATOM 559 N GLY 72 23.517 22.244 13.918 1.00124.39 N ATOM 560 CA GLY 72 24.277 21.969 12.746 1.00124.39 C ATOM 561 C GLY 72 23.730 20.729 12.121 1.00124.39 C ATOM 562 O GLY 72 24.441 19.739 11.956 1.00124.39 O ATOM 563 N PHE 73 22.425 20.742 11.791 1.00 86.70 N ATOM 564 CA PHE 73 21.826 19.627 11.120 1.00 86.70 C ATOM 565 CB PHE 73 20.298 19.728 11.041 1.00 86.70 C ATOM 566 CG PHE 73 19.843 18.565 10.229 1.00 86.70 C ATOM 567 CD1 PHE 73 19.719 17.325 10.810 1.00 86.70 C ATOM 568 CD2 PHE 73 19.547 18.713 8.891 1.00 86.70 C ATOM 569 CE1 PHE 73 19.304 16.241 10.075 1.00 86.70 C ATOM 570 CE2 PHE 73 19.133 17.631 8.150 1.00 86.70 C ATOM 571 CZ PHE 73 19.009 16.397 8.741 1.00 86.70 C ATOM 572 C PHE 73 22.305 19.584 9.702 1.00 86.70 C ATOM 573 O PHE 73 22.730 18.551 9.186 1.00 86.70 O ATOM 574 N ALA 74 22.232 20.763 9.066 1.00150.42 N ATOM 575 CA ALA 74 22.410 21.083 7.680 1.00150.42 C ATOM 576 CB ALA 74 21.921 22.488 7.344 1.00150.42 C ATOM 577 C ALA 74 23.785 20.955 7.100 1.00150.42 C ATOM 578 O ALA 74 23.854 20.810 5.887 1.00150.42 O ATOM 579 N TYR 75 24.881 21.092 7.886 1.00150.38 N ATOM 580 CA TYR 75 26.263 21.158 7.449 1.00150.38 C ATOM 581 CB TYR 75 27.268 20.497 8.418 1.00150.38 C ATOM 582 CG TYR 75 27.667 21.511 9.437 1.00150.38 C ATOM 583 CD1 TYR 75 28.638 22.430 9.107 1.00150.38 C ATOM 584 CD2 TYR 75 27.122 21.560 10.701 1.00150.38 C ATOM 585 CE1 TYR 75 29.059 23.390 9.995 1.00150.38 C ATOM 586 CE2 TYR 75 27.539 22.520 11.597 1.00150.38 C ATOM 587 CZ TYR 75 28.509 23.437 11.248 1.00150.38 C ATOM 588 OH TYR 75 28.941 24.423 12.163 1.00150.38 H ATOM 589 C TYR 75 26.555 20.673 6.056 1.00150.38 C ATOM 590 O TYR 75 26.322 19.519 5.696 1.00150.38 O ATOM 591 N GLU 76 27.105 21.602 5.242 1.00 67.63 N ATOM 592 CA GLU 76 27.450 21.355 3.870 1.00 67.63 C ATOM 593 CB GLU 76 26.505 22.062 2.880 1.00 67.63 C ATOM 594 CG GLU 76 25.053 21.571 2.910 1.00 67.63 C ATOM 595 CD GLU 76 24.193 22.694 2.332 1.00 67.63 C ATOM 596 OE1 GLU 76 24.607 23.873 2.486 1.00 67.63 O ATOM 597 OE2 GLU 76 23.120 22.398 1.742 1.00 67.63 O ATOM 598 C GLU 76 28.815 21.934 3.663 1.00 67.63 C ATOM 599 O GLU 76 29.139 23.009 4.165 1.00 67.63 O ATOM 600 N TYR 77 29.660 21.226 2.895 1.00126.01 N ATOM 601 CA TYR 77 31.004 21.677 2.711 1.00126.01 C ATOM 602 CB TYR 77 32.007 20.597 3.156 1.00126.01 C ATOM 603 CG TYR 77 31.641 20.125 4.534 1.00126.01 C ATOM 604 CD1 TYR 77 30.638 19.193 4.705 1.00126.01 C ATOM 605 CD2 TYR 77 32.286 20.585 5.663 1.00126.01 C ATOM 606 CE1 TYR 77 30.282 18.728 5.951 1.00126.01 C ATOM 607 CE2 TYR 77 31.938 20.123 6.913 1.00126.01 C ATOM 608 CZ TYR 77 30.934 19.193 7.068 1.00126.01 C ATOM 609 OH TYR 77 30.579 18.718 8.350 1.00126.01 H ATOM 610 C TYR 77 31.153 21.883 1.238 1.00126.01 C ATOM 611 O TYR 77 30.762 21.031 0.442 1.00126.01 O ATOM 612 N THR 78 31.693 23.041 0.822 1.00130.37 N ATOM 613 CA THR 78 31.819 23.269 -0.589 1.00130.37 C ATOM 614 CB THR 78 30.946 24.388 -1.056 1.00130.37 C ATOM 615 OG1 THR 78 31.309 25.577 -0.384 1.00130.37 O ATOM 616 CG2 THR 78 29.485 24.049 -0.722 1.00130.37 C ATOM 617 C THR 78 33.236 23.643 -0.867 1.00130.37 C ATOM 618 O THR 78 33.768 24.578 -0.274 1.00130.37 O ATOM 619 N LEU 79 33.874 22.924 -1.808 1.00139.64 N ATOM 620 CA LEU 79 35.262 23.133 -2.108 1.00139.64 C ATOM 621 CB LEU 79 35.913 21.846 -2.644 1.00139.64 C ATOM 622 CG LEU 79 37.432 21.919 -2.861 1.00139.64 C ATOM 623 CD1 LEU 79 37.814 22.827 -4.035 1.00139.64 C ATOM 624 CD2 LEU 79 38.131 22.298 -1.551 1.00139.64 C ATOM 625 C LEU 79 35.354 24.195 -3.153 1.00139.64 C ATOM 626 O LEU 79 34.632 24.167 -4.149 1.00139.64 O ATOM 627 N GLU 80 36.255 25.179 -2.947 1.00 64.26 N ATOM 628 CA GLU 80 36.334 26.232 -3.913 1.00 64.26 C ATOM 629 CB GLU 80 35.649 27.536 -3.440 1.00 64.26 C ATOM 630 CG GLU 80 34.140 27.352 -3.227 1.00 64.26 C ATOM 631 CD GLU 80 33.457 28.712 -3.141 1.00 64.26 C ATOM 632 OE1 GLU 80 33.812 29.511 -2.234 1.00 64.26 O ATOM 633 OE2 GLU 80 32.565 28.967 -3.992 1.00 64.26 O ATOM 634 C GLU 80 37.768 26.509 -4.257 1.00 64.26 C ATOM 635 O GLU 80 38.646 26.502 -3.393 1.00 64.26 O ATOM 636 N ILE 81 38.014 26.725 -5.572 1.00126.28 N ATOM 637 CA ILE 81 39.282 27.049 -6.174 1.00126.28 C ATOM 638 CB ILE 81 39.627 26.217 -7.381 1.00126.28 C ATOM 639 CG2 ILE 81 40.589 27.065 -8.229 1.00126.28 C ATOM 640 CG1 ILE 81 40.204 24.840 -7.048 1.00126.28 C ATOM 641 CD1 ILE 81 41.683 24.945 -6.689 1.00126.28 C ATOM 642 C ILE 81 39.175 28.410 -6.786 1.00126.28 C ATOM 643 O ILE 81 38.382 28.632 -7.701 1.00126.28 O ATOM 644 N ASN 82 40.006 29.346 -6.294 1.00103.09 N ATOM 645 CA ASN 82 40.102 30.672 -6.825 1.00103.09 C ATOM 646 CB ASN 82 40.948 30.748 -8.110 1.00103.09 C ATOM 647 CG ASN 82 42.392 30.514 -7.670 1.00103.09 C ATOM 648 OD1 ASN 82 43.228 29.978 -8.394 1.00103.09 O ATOM 649 ND2 ASN 82 42.697 30.934 -6.413 1.00103.09 N ATOM 650 C ASN 82 38.743 31.262 -7.043 1.00103.09 C ATOM 651 O ASN 82 38.467 31.839 -8.093 1.00103.09 O ATOM 652 N GLY 83 37.847 31.131 -6.048 1.00 24.30 N ATOM 653 CA GLY 83 36.566 31.767 -6.149 1.00 24.30 C ATOM 654 C GLY 83 35.637 30.973 -7.012 1.00 24.30 C ATOM 655 O GLY 83 34.630 31.505 -7.479 1.00 24.30 O ATOM 656 N LYS 84 35.928 29.681 -7.253 1.00105.33 N ATOM 657 CA LYS 84 35.032 28.937 -8.095 1.00105.33 C ATOM 658 CB LYS 84 35.708 28.420 -9.378 1.00105.33 C ATOM 659 CG LYS 84 34.733 27.800 -10.380 1.00105.33 C ATOM 660 CD LYS 84 35.331 27.494 -11.757 1.00105.33 C ATOM 661 CE LYS 84 35.902 26.078 -11.846 1.00105.33 C ATOM 662 NZ LYS 84 35.406 25.396 -13.063 1.00105.33 N ATOM 663 C LYS 84 34.486 27.772 -7.316 1.00105.33 C ATOM 664 O LYS 84 35.153 27.232 -6.435 1.00105.33 O ATOM 665 N SER 85 33.229 27.367 -7.610 1.00 36.79 N ATOM 666 CA SER 85 32.624 26.285 -6.879 1.00 36.79 C ATOM 667 CB SER 85 31.082 26.281 -6.881 1.00 36.79 C ATOM 668 OG SER 85 30.576 25.947 -8.167 1.00 36.79 O ATOM 669 C SER 85 33.064 24.976 -7.452 1.00 36.79 C ATOM 670 O SER 85 33.344 24.859 -8.645 1.00 36.79 O ATOM 671 N LEU 86 33.120 23.947 -6.586 1.00 91.23 N ATOM 672 CA LEU 86 33.543 22.651 -7.027 1.00 91.23 C ATOM 673 CB LEU 86 34.742 22.119 -6.217 1.00 91.23 C ATOM 674 CG LEU 86 35.498 20.902 -6.796 1.00 91.23 C ATOM 675 CD1 LEU 86 36.660 20.515 -5.870 1.00 91.23 C ATOM 676 CD2 LEU 86 34.595 19.706 -7.104 1.00 91.23 C ATOM 677 C LEU 86 32.379 21.737 -6.819 1.00 91.23 C ATOM 678 O LEU 86 31.696 21.807 -5.797 1.00 91.23 O ATOM 679 N LYS 87 32.125 20.867 -7.814 1.00 70.31 N ATOM 680 CA LYS 87 31.023 19.958 -7.782 1.00 70.31 C ATOM 681 CB LYS 87 30.794 19.290 -9.147 1.00 70.31 C ATOM 682 CG LYS 87 30.430 20.283 -10.251 1.00 70.31 C ATOM 683 CD LYS 87 30.528 19.683 -11.654 1.00 70.31 C ATOM 684 CE LYS 87 29.772 20.482 -12.718 1.00 70.31 C ATOM 685 NZ LYS 87 30.610 21.585 -13.232 1.00 70.31 N ATOM 686 C LYS 87 31.324 18.851 -6.827 1.00 70.31 C ATOM 687 O LYS 87 32.336 18.167 -6.954 1.00 70.31 O ATOM 688 N LYS 88 30.433 18.637 -5.840 1.00 84.82 N ATOM 689 CA LYS 88 30.624 17.509 -4.978 1.00 84.82 C ATOM 690 CB LYS 88 29.756 17.508 -3.695 1.00 84.82 C ATOM 691 CG LYS 88 30.251 16.517 -2.630 1.00 84.82 C ATOM 692 CD LYS 88 29.611 16.654 -1.240 1.00 84.82 C ATOM 693 CE LYS 88 30.049 17.894 -0.453 1.00 84.82 C ATOM 694 NZ LYS 88 29.552 17.814 0.941 1.00 84.82 N ATOM 695 C LYS 88 30.203 16.370 -5.839 1.00 84.82 C ATOM 696 O LYS 88 29.449 16.569 -6.790 1.00 84.82 O ATOM 697 N TYR 89 30.700 15.151 -5.570 1.00149.42 N ATOM 698 CA TYR 89 30.315 14.089 -6.444 1.00149.42 C ATOM 699 CB TYR 89 31.022 12.752 -6.138 1.00149.42 C ATOM 700 CG TYR 89 30.798 12.332 -4.725 1.00149.42 C ATOM 701 CD1 TYR 89 31.281 13.112 -3.700 1.00149.42 C ATOM 702 CD2 TYR 89 30.165 11.149 -4.420 1.00149.42 C ATOM 703 CE1 TYR 89 31.114 12.745 -2.388 1.00149.42 C ATOM 704 CE2 TYR 89 29.994 10.772 -3.105 1.00149.42 C ATOM 705 CZ TYR 89 30.466 11.571 -2.090 1.00149.42 C ATOM 706 OH TYR 89 30.297 11.191 -0.742 1.00149.42 H ATOM 707 C TYR 89 28.836 13.935 -6.352 1.00149.42 C ATOM 708 O TYR 89 28.151 13.862 -7.369 1.00149.42 O ATOM 709 N MET 90 28.295 13.932 -5.123 1.00 39.80 N ATOM 710 CA MET 90 26.875 13.825 -4.980 1.00 39.80 C ATOM 711 CB MET 90 26.101 14.868 -5.799 1.00 39.80 C ATOM 712 CG MET 90 26.514 16.310 -5.523 1.00 39.80 C ATOM 713 SD MET 90 25.576 17.528 -6.490 1.00 39.80 S ATOM 714 CE MET 90 25.772 16.664 -8.076 1.00 39.80 C ATOM 715 C MET 90 26.451 12.467 -5.525 1.00 39.80 C ATOM 716 O MET 90 27.343 11.677 -5.932 1.00 39.80 O TER END ########################## # # # ACE results: # # # ########################## ERROR! Check atoms coordinates in residues 3 and 4 ERROR! Total number of errors 1 Number of atoms possible to evaluate: 714 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.67 51.7 178 100.0 178 ARMSMC SECONDARY STRUCTURE . . 58.01 62.7 118 100.0 118 ARMSMC SURFACE . . . . . . . . 76.18 45.4 108 100.0 108 ARMSMC BURIED . . . . . . . . 64.08 61.4 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.32 49.3 75 100.0 75 ARMSSC1 RELIABLE SIDE CHAINS . 84.69 51.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 89.94 46.2 52 100.0 52 ARMSSC1 SURFACE . . . . . . . . 89.79 45.5 44 100.0 44 ARMSSC1 BURIED . . . . . . . . 83.67 54.8 31 100.0 31 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.43 36.4 55 100.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 83.31 43.5 46 100.0 46 ARMSSC2 SECONDARY STRUCTURE . . 91.14 41.0 39 100.0 39 ARMSSC2 SURFACE . . . . . . . . 86.02 42.4 33 100.0 33 ARMSSC2 BURIED . . . . . . . . 99.00 27.3 22 100.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.40 33.3 24 100.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 77.40 33.3 24 100.0 24 ARMSSC3 SECONDARY STRUCTURE . . 69.26 35.3 17 100.0 17 ARMSSC3 SURFACE . . . . . . . . 78.02 38.9 18 100.0 18 ARMSSC3 BURIED . . . . . . . . 75.51 16.7 6 100.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.30 23.1 13 100.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 77.30 23.1 13 100.0 13 ARMSSC4 SECONDARY STRUCTURE . . 74.73 20.0 10 100.0 10 ARMSSC4 SURFACE . . . . . . . . 79.93 18.2 11 100.0 11 ARMSSC4 BURIED . . . . . . . . 60.84 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.53 (Number of atoms: 90) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.53 90 100.0 90 CRMSCA CRN = ALL/NP . . . . . 0.0615 CRMSCA SECONDARY STRUCTURE . . 4.03 59 100.0 59 CRMSCA SURFACE . . . . . . . . 5.84 55 100.0 55 CRMSCA BURIED . . . . . . . . 5.02 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.56 441 99.8 442 CRMSMC SECONDARY STRUCTURE . . 4.14 292 99.7 293 CRMSMC SURFACE . . . . . . . . 5.85 269 100.0 269 CRMSMC BURIED . . . . . . . . 5.08 172 99.4 173 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.15 355 99.7 356 CRMSSC RELIABLE SIDE CHAINS . 7.26 316 100.0 316 CRMSSC SECONDARY STRUCTURE . . 5.52 251 99.6 252 CRMSSC SURFACE . . . . . . . . 7.81 204 100.0 204 CRMSSC BURIED . . . . . . . . 6.15 151 99.3 152 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.35 714 99.7 716 CRMSALL SECONDARY STRUCTURE . . 4.86 486 99.6 488 CRMSALL SURFACE . . . . . . . . 6.78 424 100.0 424 CRMSALL BURIED . . . . . . . . 5.66 290 99.3 292 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 108.459 0.912 0.917 90 100.0 90 ERRCA SECONDARY STRUCTURE . . 107.688 0.935 0.938 59 100.0 59 ERRCA SURFACE . . . . . . . . 99.724 0.895 0.903 55 100.0 55 ERRCA BURIED . . . . . . . . 122.184 0.938 0.941 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 108.045 0.911 0.917 441 99.8 442 ERRMC SECONDARY STRUCTURE . . 107.788 0.934 0.937 292 99.7 293 ERRMC SURFACE . . . . . . . . 98.837 0.895 0.902 269 100.0 269 ERRMC BURIED . . . . . . . . 122.445 0.936 0.939 172 99.4 173 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 111.599 0.900 0.907 355 99.7 356 ERRSC RELIABLE SIDE CHAINS . 111.603 0.899 0.906 316 100.0 316 ERRSC SECONDARY STRUCTURE . . 108.823 0.924 0.927 251 99.6 252 ERRSC SURFACE . . . . . . . . 101.098 0.876 0.886 204 100.0 204 ERRSC BURIED . . . . . . . . 125.786 0.933 0.936 151 99.3 152 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 109.605 0.906 0.912 714 99.7 716 ERRALL SECONDARY STRUCTURE . . 108.236 0.929 0.932 486 99.6 488 ERRALL SURFACE . . . . . . . . 99.750 0.886 0.895 424 100.0 424 ERRALL BURIED . . . . . . . . 124.014 0.934 0.937 290 99.3 292 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 29 44 52 84 90 90 DISTCA CA (P) 3.33 32.22 48.89 57.78 93.33 90 DISTCA CA (RMS) 0.91 1.55 1.95 2.35 4.75 DISTCA ALL (N) 19 177 290 402 617 714 716 DISTALL ALL (P) 2.65 24.72 40.50 56.15 86.17 716 DISTALL ALL (RMS) 0.78 1.54 1.98 2.67 4.64 DISTALL END of the results output