####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 355), selected 45 , name T0539TS296_1-D1 # Molecule2: number of CA atoms 68 ( 1014), selected 45 , name T0539-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0539TS296_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 30 - 74 2.34 2.34 LCS_AVERAGE: 66.18 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 43 - 74 1.96 2.56 LCS_AVERAGE: 40.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 46 - 64 0.95 2.99 LCS_AVERAGE: 19.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 30 E 30 4 15 45 0 3 6 13 24 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT M 31 M 31 9 17 45 3 6 14 18 22 30 40 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 32 C 32 10 17 45 4 11 15 25 35 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 33 C 33 10 17 45 5 11 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT P 34 P 34 10 17 45 5 11 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT I 35 I 35 10 17 45 5 11 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 36 C 36 10 17 45 5 11 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 37 C 37 10 17 45 3 11 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT S 38 S 38 10 17 45 5 11 24 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT E 39 E 39 10 17 45 5 11 23 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT Y 40 Y 40 10 17 45 3 11 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT V 41 V 41 10 17 45 4 11 16 25 35 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT K 42 K 42 5 17 45 3 4 5 13 19 27 32 37 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT G 43 G 43 5 32 45 3 4 9 12 22 30 40 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT E 44 E 44 12 32 45 3 9 12 19 31 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT V 45 V 45 13 32 45 3 9 13 29 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT A 46 A 46 19 32 45 3 13 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT T 47 T 47 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT E 48 E 48 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT L 49 L 49 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT P 50 P 50 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 51 C 51 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT H 52 H 52 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT H 53 H 53 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT Y 54 Y 54 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT F 55 F 55 19 32 45 4 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT H 56 H 56 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT K 57 K 57 19 32 45 4 18 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT P 58 P 58 19 32 45 8 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 59 C 59 19 32 45 7 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT V 60 V 60 19 32 45 4 13 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT S 61 S 61 19 32 45 6 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT I 62 I 62 19 32 45 6 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT W 63 W 63 19 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT L 64 L 64 19 32 45 6 11 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT Q 65 Q 65 13 32 45 6 10 18 30 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT K 66 K 66 13 32 45 6 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT S 67 S 67 13 32 45 3 8 20 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT G 68 G 68 6 32 45 3 7 14 22 26 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT T 69 T 69 6 32 45 4 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 70 C 70 6 32 45 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT P 71 P 71 6 32 45 4 11 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT V 72 V 72 6 32 45 7 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT C 73 C 73 6 32 45 8 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 LCS_GDT R 74 R 74 4 32 45 3 4 4 7 26 35 38 41 42 44 45 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 42.00 ( 19.22 40.62 66.18 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 19 26 34 36 39 41 42 43 44 45 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 13.24 27.94 38.24 50.00 52.94 57.35 60.29 61.76 63.24 64.71 66.18 66.18 66.18 66.18 66.18 66.18 66.18 66.18 66.18 66.18 GDT RMS_LOCAL 0.33 0.66 0.98 1.37 1.49 1.75 1.88 2.00 2.13 2.22 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 GDT RMS_ALL_AT 3.29 2.96 2.85 2.60 2.53 2.44 2.39 2.37 2.35 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 # Checking swapping # possible swapping detected: Y 40 Y 40 # possible swapping detected: F 55 F 55 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 30 E 30 3.506 0 0.170 0.547 6.015 34.524 39.735 LGA M 31 M 31 4.767 0 0.611 0.967 9.233 40.357 24.881 LGA C 32 C 32 2.827 0 0.144 0.764 4.371 55.595 54.048 LGA C 33 C 33 1.914 0 0.070 0.155 2.161 70.833 72.937 LGA P 34 P 34 1.925 0 0.104 0.174 2.411 70.833 68.231 LGA I 35 I 35 1.148 0 0.136 0.211 1.714 81.429 80.417 LGA C 36 C 36 1.109 0 0.162 0.180 1.588 79.286 80.000 LGA C 37 C 37 1.754 0 0.059 0.730 4.712 72.857 65.952 LGA S 38 S 38 1.105 0 0.095 0.624 2.489 81.429 80.159 LGA E 39 E 39 1.265 0 0.136 0.614 5.674 88.333 62.169 LGA Y 40 Y 40 1.916 0 0.139 0.905 6.385 65.119 43.770 LGA V 41 V 41 2.903 0 0.143 1.060 5.068 61.190 52.993 LGA K 42 K 42 5.867 0 0.617 0.783 15.299 19.762 9.630 LGA G 43 G 43 5.479 0 0.118 0.118 5.583 27.619 27.619 LGA E 44 E 44 3.759 3 0.517 0.575 4.995 48.333 29.788 LGA V 45 V 45 2.535 0 0.269 1.110 4.276 50.357 53.469 LGA A 46 A 46 1.060 0 0.078 0.107 1.251 85.952 85.048 LGA T 47 T 47 0.734 0 0.138 0.961 3.148 90.476 82.109 LGA E 48 E 48 1.188 0 0.024 0.600 2.730 83.690 75.979 LGA L 49 L 49 1.430 0 0.056 0.069 1.703 77.143 76.071 LGA P 50 P 50 1.583 0 0.083 0.275 2.078 70.833 72.925 LGA C 51 C 51 2.170 0 0.383 0.677 3.113 70.833 65.079 LGA H 52 H 52 2.280 0 0.051 1.490 8.433 62.857 40.476 LGA H 53 H 53 2.325 0 0.196 1.124 4.031 64.762 65.667 LGA Y 54 Y 54 1.862 0 0.047 0.059 2.828 70.833 64.246 LGA F 55 F 55 1.455 0 0.036 0.211 2.177 77.143 73.723 LGA H 56 H 56 1.555 0 0.062 0.987 6.563 75.000 53.048 LGA K 57 K 57 1.792 0 0.068 0.817 5.571 75.000 57.725 LGA P 58 P 58 1.089 0 0.046 0.269 2.312 85.952 79.184 LGA C 59 C 59 0.542 0 0.046 0.699 2.090 90.476 86.190 LGA V 60 V 60 1.426 0 0.045 0.929 3.011 83.690 74.626 LGA S 61 S 61 1.308 0 0.036 0.052 2.275 83.690 78.730 LGA I 62 I 62 1.043 0 0.024 0.132 2.308 88.214 79.583 LGA W 63 W 63 0.708 0 0.067 1.138 10.151 90.476 44.048 LGA L 64 L 64 1.611 0 0.092 1.392 6.631 77.262 54.643 LGA Q 65 Q 65 2.151 0 0.219 0.956 6.266 70.833 51.376 LGA K 66 K 66 1.432 0 0.082 0.817 2.762 83.690 73.280 LGA S 67 S 67 1.994 0 0.327 0.298 6.230 83.810 63.968 LGA G 68 G 68 3.617 0 0.561 0.561 4.186 52.619 52.619 LGA T 69 T 69 1.363 0 0.175 0.426 3.882 77.143 66.599 LGA C 70 C 70 1.603 0 0.033 0.073 2.441 79.405 75.873 LGA P 71 P 71 1.379 0 0.100 0.362 2.167 81.429 76.599 LGA V 72 V 72 0.999 0 0.118 0.171 1.257 85.952 85.306 LGA C 73 C 73 1.650 0 0.644 0.837 3.622 72.976 69.444 LGA R 74 R 74 4.530 0 0.435 1.666 5.090 35.833 42.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 348 348 100.00 68 SUMMARY(RMSD_GDC): 2.336 2.293 3.409 46.703 41.358 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 68 4.0 42 2.00 51.471 51.364 1.995 LGA_LOCAL RMSD: 2.005 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.375 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.336 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.616206 * X + 0.782974 * Y + 0.085096 * Z + -2.446088 Y_new = -0.569339 * X + -0.368187 * Y + -0.735046 * Z + 2.623806 Z_new = -0.544190 * X + -0.501389 * Y + 0.672656 * Z + -0.050425 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.395707 0.575424 -0.640542 [DEG: -137.2639 32.9694 -36.7003 ] ZXZ: 0.115257 0.833004 -2.315281 [DEG: 6.6037 47.7276 -132.6559 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0539TS296_1-D1 REMARK 2: T0539-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0539TS296_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 68 4.0 42 2.00 51.364 2.34 REMARK ---------------------------------------------------------- MOLECULE T0539TS296_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0539 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N GLU 30 -13.471 3.364 -6.859 1.00 1.00 N ATOM 2 CA GLU 30 -12.959 2.250 -7.691 1.00 1.00 C ATOM 3 C GLU 30 -11.708 1.664 -7.130 1.00 1.00 C ATOM 4 O GLU 30 -11.568 1.471 -5.923 1.00 1.00 O ATOM 5 H1 GLU 30 -14.224 3.796 -7.099 1.00 1.00 H ATOM 6 H2 GLU 30 -12.962 4.093 -6.720 1.00 1.00 H ATOM 7 H3 GLU 30 -13.695 3.217 -6.000 1.00 1.00 H ATOM 8 CB GLU 30 -12.707 2.725 -9.124 1.00 1.00 C ATOM 9 CD GLU 30 -13.677 3.588 -11.291 1.00 1.00 C ATOM 10 CG GLU 30 -13.969 3.098 -9.886 1.00 1.00 C ATOM 11 OE1 GLU 30 -12.488 3.794 -11.614 1.00 1.00 O ATOM 12 OE2 GLU 30 -14.638 3.764 -12.069 1.00 1.00 O ATOM 13 N MET 31 -10.757 1.330 -8.017 1.00 1.00 N ATOM 14 CA MET 31 -9.538 0.779 -7.523 1.00 1.00 C ATOM 15 C MET 31 -8.419 1.613 -8.014 1.00 1.00 C ATOM 16 O MET 31 -8.321 1.922 -9.200 1.00 1.00 O ATOM 18 CB MET 31 -9.391 -0.678 -7.966 1.00 1.00 C ATOM 19 SD MET 31 -7.977 -3.060 -8.031 1.00 1.00 S ATOM 20 CE MET 31 -9.182 -3.856 -6.972 1.00 1.00 C ATOM 21 CG MET 31 -8.116 -1.348 -7.481 1.00 1.00 C ATOM 22 N CYS 32 -7.546 2.021 -7.083 1.00 1.00 N ATOM 23 CA CYS 32 -6.408 2.771 -7.494 1.00 1.00 C ATOM 24 C CYS 32 -5.683 3.148 -6.256 1.00 1.00 C ATOM 25 O CYS 32 -6.275 3.198 -5.181 1.00 1.00 O ATOM 27 CB CYS 32 -6.836 3.987 -8.316 1.00 1.00 C ATOM 28 SG CYS 32 -7.855 5.178 -7.413 1.00 1.00 S ATOM 29 N CYS 33 -4.371 3.413 -6.384 1.00 1.00 N ATOM 30 CA CYS 33 -3.608 3.823 -5.247 1.00 1.00 C ATOM 31 C CYS 33 -4.163 5.152 -4.851 1.00 1.00 C ATOM 32 O CYS 33 -4.116 6.107 -5.622 1.00 1.00 O ATOM 34 CB CYS 33 -2.119 3.876 -5.592 1.00 1.00 C ATOM 35 SG CYS 33 -1.051 4.371 -4.219 1.00 1.00 S ATOM 36 N PRO 34 -4.709 5.237 -3.679 1.00 1.00 N ATOM 37 CA PRO 34 -5.293 6.447 -3.175 1.00 1.00 C ATOM 38 C PRO 34 -4.255 7.491 -2.934 1.00 1.00 C ATOM 39 O PRO 34 -4.596 8.670 -2.870 1.00 1.00 O ATOM 40 CB PRO 34 -5.967 6.017 -1.870 1.00 1.00 C ATOM 41 CD PRO 34 -4.820 4.090 -2.706 1.00 1.00 C ATOM 42 CG PRO 34 -5.214 4.803 -1.443 1.00 1.00 C ATOM 43 N ILE 35 -2.996 7.080 -2.704 1.00 1.00 N ATOM 44 CA ILE 35 -1.979 8.056 -2.453 1.00 1.00 C ATOM 45 C ILE 35 -1.617 8.820 -3.697 1.00 1.00 C ATOM 46 O ILE 35 -1.708 10.047 -3.733 1.00 1.00 O ATOM 48 CB ILE 35 -0.713 7.411 -1.860 1.00 1.00 C ATOM 49 CD1 ILE 35 0.100 5.978 0.084 1.00 1.00 C ATOM 50 CG1 ILE 35 -0.995 6.870 -0.458 1.00 1.00 C ATOM 51 CG2 ILE 35 0.441 8.403 -1.864 1.00 1.00 C ATOM 52 N CYS 36 -1.170 8.091 -4.741 1.00 1.00 N ATOM 53 CA CYS 36 -0.753 8.598 -6.022 1.00 1.00 C ATOM 54 C CYS 36 -1.922 8.964 -6.878 1.00 1.00 C ATOM 55 O CYS 36 -1.897 9.966 -7.593 1.00 1.00 O ATOM 57 CB CYS 36 0.117 7.570 -6.747 1.00 1.00 C ATOM 58 SG CYS 36 1.741 7.304 -5.997 1.00 1.00 S ATOM 59 N CYS 37 -2.998 8.161 -6.786 1.00 1.00 N ATOM 60 CA CYS 37 -4.145 8.259 -7.640 1.00 1.00 C ATOM 61 C CYS 37 -3.752 8.029 -9.074 1.00 1.00 C ATOM 62 O CYS 37 -4.216 8.732 -9.971 1.00 1.00 O ATOM 64 CB CYS 37 -4.817 9.625 -7.482 1.00 1.00 C ATOM 65 SG CYS 37 -5.401 9.980 -5.809 1.00 1.00 S ATOM 66 N SER 38 -2.867 7.035 -9.324 1.00 1.00 N ATOM 67 CA SER 38 -2.521 6.657 -10.668 1.00 1.00 C ATOM 68 C SER 38 -2.715 5.177 -10.767 1.00 1.00 C ATOM 69 O SER 38 -2.291 4.423 -9.892 1.00 1.00 O ATOM 71 CB SER 38 -1.086 7.078 -10.992 1.00 1.00 C ATOM 73 OG SER 38 -0.942 8.486 -10.931 1.00 1.00 O ATOM 74 N GLU 39 -3.350 4.710 -11.859 1.00 1.00 N ATOM 75 CA GLU 39 -3.624 3.308 -11.924 1.00 1.00 C ATOM 76 C GLU 39 -2.334 2.580 -11.921 1.00 1.00 C ATOM 77 O GLU 39 -1.379 2.960 -12.597 1.00 1.00 O ATOM 79 CB GLU 39 -4.451 2.982 -13.169 1.00 1.00 C ATOM 80 CD GLU 39 -5.730 1.248 -14.489 1.00 1.00 C ATOM 81 CG GLU 39 -4.870 1.524 -13.272 1.00 1.00 C ATOM 82 OE1 GLU 39 -5.956 2.189 -15.281 1.00 1.00 O ATOM 83 OE2 GLU 39 -6.178 0.094 -14.652 1.00 1.00 O ATOM 84 N TYR 40 -2.270 1.489 -11.141 1.00 1.00 N ATOM 85 CA TYR 40 -1.005 0.836 -11.111 1.00 1.00 C ATOM 86 C TYR 40 -1.190 -0.474 -11.792 1.00 1.00 C ATOM 87 O TYR 40 -2.281 -1.040 -11.812 1.00 1.00 O ATOM 89 CB TYR 40 -0.516 0.683 -9.670 1.00 1.00 C ATOM 90 CG TYR 40 -0.182 1.994 -8.993 1.00 1.00 C ATOM 92 OH TYR 40 0.726 5.594 -7.121 1.00 1.00 H ATOM 93 CZ TYR 40 0.426 4.403 -7.742 1.00 1.00 C ATOM 94 CD1 TYR 40 -0.470 2.195 -7.649 1.00 1.00 C ATOM 95 CE1 TYR 40 -0.169 3.389 -7.023 1.00 1.00 C ATOM 96 CD2 TYR 40 0.417 3.028 -9.702 1.00 1.00 C ATOM 97 CE2 TYR 40 0.724 4.229 -9.092 1.00 1.00 C ATOM 98 N VAL 41 -0.129 -0.959 -12.455 1.00 1.00 N ATOM 99 CA VAL 41 -0.289 -2.227 -13.087 1.00 1.00 C ATOM 100 C VAL 41 0.544 -3.212 -12.345 1.00 1.00 C ATOM 101 O VAL 41 1.739 -3.012 -12.123 1.00 1.00 O ATOM 103 CB VAL 41 0.094 -2.167 -14.578 1.00 1.00 C ATOM 104 CG1 VAL 41 -0.032 -3.542 -15.215 1.00 1.00 C ATOM 105 CG2 VAL 41 -0.772 -1.155 -15.310 1.00 1.00 C ATOM 106 N LYS 42 -0.100 -4.328 -11.964 1.00 1.00 N ATOM 107 CA LYS 42 0.488 -5.361 -11.166 1.00 1.00 C ATOM 108 C LYS 42 1.617 -5.967 -11.912 1.00 1.00 C ATOM 109 O LYS 42 2.566 -6.471 -11.311 1.00 1.00 O ATOM 111 CB LYS 42 -0.559 -6.414 -10.797 1.00 1.00 C ATOM 112 CD LYS 42 -2.687 -6.967 -9.586 1.00 1.00 C ATOM 113 CE LYS 42 -2.166 -8.234 -8.928 1.00 1.00 C ATOM 114 CG LYS 42 -1.577 -5.944 -9.772 1.00 1.00 C ATOM 118 NZ LYS 42 -3.259 -9.209 -8.658 1.00 1.00 N ATOM 119 N GLY 43 1.531 -5.937 -13.252 1.00 1.00 N ATOM 120 CA GLY 43 2.554 -6.546 -14.039 1.00 1.00 C ATOM 121 C GLY 43 3.850 -5.914 -13.660 1.00 1.00 C ATOM 122 O GLY 43 4.856 -6.608 -13.519 1.00 1.00 O ATOM 124 N GLU 44 3.889 -4.579 -13.503 1.00 1.00 N ATOM 125 CA GLU 44 5.163 -4.076 -13.102 1.00 1.00 C ATOM 126 C GLU 44 5.391 -4.549 -11.691 1.00 1.00 C ATOM 127 O GLU 44 6.355 -5.269 -11.435 1.00 1.00 O ATOM 129 CB GLU 44 5.198 -2.551 -13.217 1.00 1.00 C ATOM 130 CD GLU 44 7.644 -2.313 -13.798 1.00 1.00 C ATOM 131 CG GLU 44 6.533 -1.930 -12.841 1.00 1.00 C ATOM 132 OE1 GLU 44 7.334 -2.735 -14.932 1.00 1.00 O ATOM 133 OE2 GLU 44 8.827 -2.192 -13.414 1.00 1.00 O ATOM 134 N VAL 45 4.446 -4.216 -10.767 1.00 1.00 N ATOM 135 CA VAL 45 4.495 -4.569 -9.359 1.00 1.00 C ATOM 136 C VAL 45 3.178 -4.175 -8.742 1.00 1.00 C ATOM 137 O VAL 45 2.302 -3.674 -9.444 1.00 1.00 O ATOM 139 CB VAL 45 5.680 -3.891 -8.648 1.00 1.00 C ATOM 140 CG1 VAL 45 6.998 -4.352 -9.251 1.00 1.00 C ATOM 141 CG2 VAL 45 5.554 -2.378 -8.728 1.00 1.00 C ATOM 142 N ALA 46 3.003 -4.432 -7.415 1.00 1.00 N ATOM 143 CA ALA 46 1.858 -3.987 -6.652 1.00 1.00 C ATOM 144 C ALA 46 1.993 -4.543 -5.265 1.00 1.00 C ATOM 145 O ALA 46 2.556 -5.618 -5.074 1.00 1.00 O ATOM 147 CB ALA 46 0.569 -4.434 -7.322 1.00 1.00 C ATOM 148 N THR 47 1.464 -3.828 -4.250 1.00 1.00 N ATOM 149 CA THR 47 1.545 -4.309 -2.900 1.00 1.00 C ATOM 150 C THR 47 0.143 -4.527 -2.424 1.00 1.00 C ATOM 151 O THR 47 -0.715 -3.656 -2.561 1.00 1.00 O ATOM 153 CB THR 47 2.302 -3.322 -1.992 1.00 1.00 C ATOM 155 OG1 THR 47 3.637 -3.147 -2.482 1.00 1.00 O ATOM 156 CG2 THR 47 2.371 -3.853 -0.569 1.00 1.00 C ATOM 157 N GLU 48 -0.138 -5.714 -1.848 1.00 1.00 N ATOM 158 CA GLU 48 -1.484 -5.979 -1.423 1.00 1.00 C ATOM 159 C GLU 48 -1.616 -5.700 0.032 1.00 1.00 C ATOM 160 O GLU 48 -0.920 -6.287 0.859 1.00 1.00 O ATOM 162 CB GLU 48 -1.870 -7.426 -1.736 1.00 1.00 C ATOM 163 CD GLU 48 -3.651 -9.216 -1.706 1.00 1.00 C ATOM 164 CG GLU 48 -3.299 -7.782 -1.361 1.00 1.00 C ATOM 165 OE1 GLU 48 -2.838 -9.882 -2.381 1.00 1.00 O ATOM 166 OE2 GLU 48 -4.740 -9.675 -1.301 1.00 1.00 O ATOM 167 N LEU 49 -2.535 -4.782 0.386 1.00 1.00 N ATOM 168 CA LEU 49 -2.751 -4.568 1.782 1.00 1.00 C ATOM 169 C LEU 49 -3.640 -5.661 2.264 1.00 1.00 C ATOM 170 O LEU 49 -4.419 -6.234 1.506 1.00 1.00 O ATOM 172 CB LEU 49 -3.356 -3.183 2.025 1.00 1.00 C ATOM 173 CG LEU 49 -2.498 -1.987 1.609 1.00 1.00 C ATOM 174 CD1 LEU 49 -3.261 -0.685 1.802 1.00 1.00 C ATOM 175 CD2 LEU 49 -1.198 -1.958 2.396 1.00 1.00 C ATOM 176 N PRO 50 -3.524 -5.973 3.519 1.00 1.00 N ATOM 177 CA PRO 50 -4.268 -7.037 4.124 1.00 1.00 C ATOM 178 C PRO 50 -5.707 -6.756 3.876 1.00 1.00 C ATOM 179 O PRO 50 -6.510 -7.688 3.826 1.00 1.00 O ATOM 180 CB PRO 50 -3.886 -6.961 5.604 1.00 1.00 C ATOM 181 CD PRO 50 -2.557 -5.307 4.495 1.00 1.00 C ATOM 182 CG PRO 50 -2.540 -6.316 5.609 1.00 1.00 C ATOM 183 N CYS 51 -6.046 -5.465 3.744 1.00 1.00 N ATOM 184 CA CYS 51 -7.398 -5.055 3.538 1.00 1.00 C ATOM 185 C CYS 51 -7.942 -5.639 2.270 1.00 1.00 C ATOM 186 O CYS 51 -8.953 -6.337 2.308 1.00 1.00 O ATOM 188 CB CYS 51 -7.494 -3.529 3.505 1.00 1.00 C ATOM 189 SG CYS 51 -9.174 -2.892 3.296 1.00 1.00 S ATOM 190 N HIS 52 -7.268 -5.362 1.132 1.00 1.00 N ATOM 191 CA HIS 52 -7.573 -5.834 -0.196 1.00 1.00 C ATOM 192 C HIS 52 -7.517 -4.652 -1.098 1.00 1.00 C ATOM 193 O HIS 52 -8.492 -4.310 -1.764 1.00 1.00 O ATOM 195 CB HIS 52 -8.941 -6.519 -0.220 1.00 1.00 C ATOM 196 CG HIS 52 -10.081 -5.604 0.102 1.00 1.00 C ATOM 197 ND1 HIS 52 -10.421 -5.265 1.393 1.00 1.00 N ATOM 198 CE1 HIS 52 -11.478 -4.434 1.363 1.00 1.00 C ATOM 199 CD2 HIS 52 -11.070 -4.867 -0.671 1.00 1.00 C ATOM 201 NE2 HIS 52 -11.873 -4.191 0.128 1.00 1.00 N ATOM 202 N HIS 53 -6.347 -4.000 -1.138 1.00 1.00 N ATOM 203 CA HIS 53 -6.151 -2.877 -1.993 1.00 1.00 C ATOM 204 C HIS 53 -4.750 -2.998 -2.485 1.00 1.00 C ATOM 205 O HIS 53 -3.963 -3.773 -1.942 1.00 1.00 O ATOM 207 CB HIS 53 -6.413 -1.574 -1.234 1.00 1.00 C ATOM 208 CG HIS 53 -7.816 -1.438 -0.733 1.00 1.00 C ATOM 209 ND1 HIS 53 -8.870 -1.094 -1.550 1.00 1.00 N ATOM 210 CE1 HIS 53 -9.998 -1.052 -0.819 1.00 1.00 C ATOM 211 CD2 HIS 53 -8.477 -1.588 0.557 1.00 1.00 C ATOM 213 NE2 HIS 53 -9.769 -1.347 0.447 1.00 1.00 N ATOM 214 N TYR 54 -4.399 -2.253 -3.548 1.00 1.00 N ATOM 215 CA TYR 54 -3.051 -2.344 -4.018 1.00 1.00 C ATOM 216 C TYR 54 -2.409 -0.994 -3.968 1.00 1.00 C ATOM 217 O TYR 54 -3.067 0.033 -4.134 1.00 1.00 O ATOM 219 CB TYR 54 -3.016 -2.912 -5.438 1.00 1.00 C ATOM 220 CG TYR 54 -3.523 -4.333 -5.543 1.00 1.00 C ATOM 222 OH TYR 54 -4.932 -8.234 -5.831 1.00 1.00 H ATOM 223 CZ TYR 54 -4.464 -6.944 -5.735 1.00 1.00 C ATOM 224 CD1 TYR 54 -4.876 -4.594 -5.716 1.00 1.00 C ATOM 225 CE1 TYR 54 -5.348 -5.889 -5.812 1.00 1.00 C ATOM 226 CD2 TYR 54 -2.647 -5.408 -5.467 1.00 1.00 C ATOM 227 CE2 TYR 54 -3.101 -6.710 -5.561 1.00 1.00 C ATOM 228 N PHE 55 -1.088 -0.976 -3.691 1.00 1.00 N ATOM 229 CA PHE 55 -0.347 0.247 -3.557 1.00 1.00 C ATOM 230 C PHE 55 0.945 0.117 -4.303 1.00 1.00 C ATOM 231 O PHE 55 1.215 -0.884 -4.966 1.00 1.00 O ATOM 233 CB PHE 55 -0.104 0.568 -2.081 1.00 1.00 C ATOM 234 CG PHE 55 -1.364 0.759 -1.287 1.00 1.00 C ATOM 235 CZ PHE 55 -3.696 1.119 0.183 1.00 1.00 C ATOM 236 CD1 PHE 55 -2.149 -0.326 -0.934 1.00 1.00 C ATOM 237 CE1 PHE 55 -3.308 -0.150 -0.203 1.00 1.00 C ATOM 238 CD2 PHE 55 -1.766 2.023 -0.893 1.00 1.00 C ATOM 239 CE2 PHE 55 -2.925 2.199 -0.162 1.00 1.00 C ATOM 240 N HIS 56 1.773 1.178 -4.216 1.00 1.00 N ATOM 241 CA HIS 56 3.064 1.191 -4.831 1.00 1.00 C ATOM 242 C HIS 56 4.019 0.894 -3.728 1.00 1.00 C ATOM 243 O HIS 56 3.847 1.371 -2.608 1.00 1.00 O ATOM 245 CB HIS 56 3.321 2.538 -5.509 1.00 1.00 C ATOM 246 CG HIS 56 4.620 2.605 -6.250 1.00 1.00 C ATOM 247 ND1 HIS 56 5.665 3.409 -5.853 1.00 1.00 N ATOM 248 CE1 HIS 56 6.689 3.254 -6.711 1.00 1.00 C ATOM 249 CD2 HIS 56 5.168 1.970 -7.441 1.00 1.00 C ATOM 251 NE2 HIS 56 6.397 2.392 -7.666 1.00 1.00 N ATOM 252 N LYS 57 5.078 0.126 -4.032 1.00 1.00 N ATOM 253 CA LYS 57 5.988 -0.298 -3.012 1.00 1.00 C ATOM 254 C LYS 57 6.529 0.948 -2.375 1.00 1.00 C ATOM 255 O LYS 57 6.699 1.000 -1.158 1.00 1.00 O ATOM 257 CB LYS 57 7.090 -1.175 -3.608 1.00 1.00 C ATOM 258 CD LYS 57 7.754 -3.358 -4.654 1.00 1.00 C ATOM 259 CE LYS 57 7.276 -4.726 -5.116 1.00 1.00 C ATOM 260 CG LYS 57 6.616 -2.548 -4.057 1.00 1.00 C ATOM 264 NZ LYS 57 8.371 -5.514 -5.745 1.00 1.00 N ATOM 265 N PRO 58 6.822 1.948 -3.167 1.00 1.00 N ATOM 266 CA PRO 58 7.214 3.215 -2.609 1.00 1.00 C ATOM 267 C PRO 58 6.142 3.978 -1.882 1.00 1.00 C ATOM 268 O PRO 58 6.438 4.542 -0.831 1.00 1.00 O ATOM 269 CB PRO 58 7.679 4.025 -3.820 1.00 1.00 C ATOM 270 CD PRO 58 7.168 1.843 -4.662 1.00 1.00 C ATOM 271 CG PRO 58 8.118 2.999 -4.810 1.00 1.00 C ATOM 272 N CYS 59 4.894 4.015 -2.399 1.00 1.00 N ATOM 273 CA CYS 59 3.861 4.786 -1.758 1.00 1.00 C ATOM 274 C CYS 59 3.567 4.180 -0.426 1.00 1.00 C ATOM 275 O CYS 59 3.333 4.876 0.561 1.00 1.00 O ATOM 277 CB CYS 59 2.608 4.837 -2.635 1.00 1.00 C ATOM 278 SG CYS 59 2.789 5.822 -4.140 1.00 1.00 S ATOM 279 N VAL 60 3.612 2.843 -0.363 1.00 1.00 N ATOM 280 CA VAL 60 3.307 2.140 0.843 1.00 1.00 C ATOM 281 C VAL 60 4.255 2.619 1.882 1.00 1.00 C ATOM 282 O VAL 60 3.931 2.662 3.064 1.00 1.00 O ATOM 284 CB VAL 60 3.392 0.615 0.645 1.00 1.00 C ATOM 285 CG1 VAL 60 3.261 -0.103 1.979 1.00 1.00 C ATOM 286 CG2 VAL 60 2.320 0.144 -0.326 1.00 1.00 C ATOM 287 N SER 61 5.488 2.943 1.470 1.00 1.00 N ATOM 288 CA SER 61 6.467 3.427 2.392 1.00 1.00 C ATOM 289 C SER 61 6.060 4.788 2.884 1.00 1.00 C ATOM 290 O SER 61 6.273 5.112 4.050 1.00 1.00 O ATOM 292 CB SER 61 7.847 3.473 1.734 1.00 1.00 C ATOM 294 OG SER 61 8.308 2.168 1.425 1.00 1.00 O ATOM 295 N ILE 62 5.478 5.616 1.991 1.00 1.00 N ATOM 296 CA ILE 62 5.087 6.978 2.263 1.00 1.00 C ATOM 297 C ILE 62 3.945 7.077 3.239 1.00 1.00 C ATOM 298 O ILE 62 4.001 7.875 4.175 1.00 1.00 O ATOM 300 CB ILE 62 4.703 7.724 0.972 1.00 1.00 C ATOM 301 CD1 ILE 62 5.600 8.376 -1.324 1.00 1.00 C ATOM 302 CG1 ILE 62 5.930 7.905 0.076 1.00 1.00 C ATOM 303 CG2 ILE 62 4.041 9.053 1.302 1.00 1.00 C ATOM 304 N TRP 63 2.876 6.277 3.064 1.00 1.00 N ATOM 305 CA TRP 63 1.753 6.391 3.953 1.00 1.00 C ATOM 306 C TRP 63 2.164 5.997 5.339 1.00 1.00 C ATOM 307 O TRP 63 1.631 6.518 6.318 1.00 1.00 O ATOM 309 CB TRP 63 0.591 5.525 3.462 1.00 1.00 C ATOM 312 CG TRP 63 0.874 4.055 3.519 1.00 1.00 C ATOM 313 CD1 TRP 63 1.379 3.278 2.517 1.00 1.00 C ATOM 315 NE1 TRP 63 1.501 1.976 2.941 1.00 1.00 N ATOM 316 CD2 TRP 63 0.667 3.183 4.638 1.00 1.00 C ATOM 317 CE2 TRP 63 1.069 1.894 4.241 1.00 1.00 C ATOM 318 CH2 TRP 63 0.520 1.004 6.358 1.00 1.00 H ATOM 319 CZ2 TRP 63 0.999 0.795 5.095 1.00 1.00 C ATOM 320 CE3 TRP 63 0.181 3.368 5.935 1.00 1.00 C ATOM 321 CZ3 TRP 63 0.114 2.275 6.779 1.00 1.00 C ATOM 322 N LEU 64 3.125 5.065 5.471 1.00 1.00 N ATOM 323 CA LEU 64 3.570 4.689 6.783 1.00 1.00 C ATOM 324 C LEU 64 4.099 5.902 7.488 1.00 1.00 C ATOM 325 O LEU 64 3.851 6.081 8.678 1.00 1.00 O ATOM 327 CB LEU 64 4.635 3.594 6.695 1.00 1.00 C ATOM 328 CG LEU 64 5.192 3.080 8.024 1.00 1.00 C ATOM 329 CD1 LEU 64 4.084 2.479 8.875 1.00 1.00 C ATOM 330 CD2 LEU 64 6.292 2.056 7.787 1.00 1.00 C ATOM 331 N GLN 65 4.848 6.763 6.775 1.00 1.00 N ATOM 332 CA GLN 65 5.432 7.934 7.368 1.00 1.00 C ATOM 333 C GLN 65 4.348 8.879 7.821 1.00 1.00 C ATOM 334 O GLN 65 4.439 9.447 8.907 1.00 1.00 O ATOM 336 CB GLN 65 6.370 8.626 6.377 1.00 1.00 C ATOM 337 CD GLN 65 8.500 8.513 5.025 1.00 1.00 C ATOM 338 CG GLN 65 7.651 7.856 6.095 1.00 1.00 C ATOM 339 OE1 GLN 65 7.983 9.187 4.135 1.00 1.00 O ATOM 342 NE2 GLN 65 9.811 8.315 5.109 1.00 1.00 N ATOM 343 N LYS 66 3.282 9.055 7.012 1.00 1.00 N ATOM 344 CA LYS 66 2.203 9.964 7.313 1.00 1.00 C ATOM 345 C LYS 66 1.441 9.478 8.508 1.00 1.00 C ATOM 346 O LYS 66 0.816 10.277 9.205 1.00 1.00 O ATOM 348 CB LYS 66 1.275 10.114 6.106 1.00 1.00 C ATOM 349 CD LYS 66 0.927 10.959 3.768 1.00 1.00 C ATOM 350 CE LYS 66 1.546 11.709 2.600 1.00 1.00 C ATOM 351 CG LYS 66 1.902 10.844 4.928 1.00 1.00 C ATOM 355 NZ LYS 66 0.610 11.809 1.446 1.00 1.00 N ATOM 356 N SER 67 1.501 8.157 8.771 1.00 1.00 N ATOM 357 CA SER 67 0.778 7.467 9.806 1.00 1.00 C ATOM 358 C SER 67 -0.698 7.511 9.548 1.00 1.00 C ATOM 359 O SER 67 -1.494 7.796 10.440 1.00 1.00 O ATOM 361 CB SER 67 1.093 8.074 11.175 1.00 1.00 C ATOM 363 OG SER 67 2.471 7.954 11.482 1.00 1.00 O ATOM 364 N GLY 68 -1.082 7.213 8.286 1.00 1.00 N ATOM 365 CA GLY 68 -2.456 7.106 7.887 1.00 1.00 C ATOM 366 C GLY 68 -2.599 5.775 7.210 1.00 1.00 C ATOM 367 O GLY 68 -1.733 5.367 6.436 1.00 1.00 O ATOM 369 N THR 69 -3.718 5.068 7.482 1.00 1.00 N ATOM 370 CA THR 69 -3.961 3.774 6.901 1.00 1.00 C ATOM 371 C THR 69 -4.722 3.989 5.632 1.00 1.00 C ATOM 372 O THR 69 -4.878 5.124 5.186 1.00 1.00 O ATOM 374 CB THR 69 -4.732 2.856 7.869 1.00 1.00 C ATOM 376 OG1 THR 69 -6.037 3.396 8.107 1.00 1.00 O ATOM 377 CG2 THR 69 -3.999 2.750 9.198 1.00 1.00 C ATOM 378 N CYS 70 -5.226 2.892 5.024 1.00 1.00 N ATOM 379 CA CYS 70 -5.955 2.959 3.782 1.00 1.00 C ATOM 380 C CYS 70 -7.024 3.986 3.914 1.00 1.00 C ATOM 381 O CYS 70 -7.960 3.810 4.692 1.00 1.00 O ATOM 383 CB CYS 70 -6.536 1.589 3.427 1.00 1.00 C ATOM 384 SG CYS 70 -7.462 1.549 1.875 1.00 1.00 S ATOM 385 N PRO 71 -6.932 5.045 3.159 1.00 1.00 N ATOM 386 CA PRO 71 -7.944 6.057 3.184 1.00 1.00 C ATOM 387 C PRO 71 -9.158 5.445 2.581 1.00 1.00 C ATOM 388 O PRO 71 -10.262 5.946 2.783 1.00 1.00 O ATOM 389 CB PRO 71 -7.352 7.194 2.349 1.00 1.00 C ATOM 390 CD PRO 71 -5.793 5.383 2.228 1.00 1.00 C ATOM 391 CG PRO 71 -6.377 6.522 1.442 1.00 1.00 C ATOM 392 N VAL 72 -8.957 4.374 1.796 1.00 1.00 N ATOM 393 CA VAL 72 -10.034 3.740 1.102 1.00 1.00 C ATOM 394 C VAL 72 -10.990 3.154 2.078 1.00 1.00 C ATOM 395 O VAL 72 -12.198 3.368 1.975 1.00 1.00 O ATOM 397 CB VAL 72 -9.522 2.657 0.134 1.00 1.00 C ATOM 398 CG1 VAL 72 -10.684 1.852 -0.427 1.00 1.00 C ATOM 399 CG2 VAL 72 -8.713 3.286 -0.989 1.00 1.00 C ATOM 400 N CYS 73 -10.484 2.407 3.073 1.00 1.00 N ATOM 401 CA CYS 73 -11.424 1.794 3.955 1.00 1.00 C ATOM 402 C CYS 73 -11.572 2.632 5.170 1.00 1.00 C ATOM 403 O CYS 73 -10.600 3.058 5.788 1.00 1.00 O ATOM 405 CB CYS 73 -10.975 0.377 4.315 1.00 1.00 C ATOM 406 SG CYS 73 -10.889 -0.759 2.911 1.00 1.00 S ATOM 407 N ARG 74 -12.841 2.897 5.517 1.00 1.00 N ATOM 408 CA ARG 74 -13.193 3.659 6.670 1.00 1.00 C ATOM 409 C ARG 74 -13.213 2.687 7.840 1.00 1.00 C ATOM 410 O ARG 74 -12.383 2.875 8.769 1.00 1.00 O ATOM 412 OXT ARG 74 -14.057 1.752 7.807 1.00 1.00 O ATOM 413 CB ARG 74 -14.540 4.353 6.462 1.00 1.00 C ATOM 414 CD ARG 74 -14.071 6.671 5.620 1.00 1.00 C ATOM 416 NE ARG 74 -12.682 6.868 5.209 1.00 1.00 N ATOM 417 CG ARG 74 -14.579 5.284 5.260 1.00 1.00 C ATOM 418 CZ ARG 74 -11.854 7.742 5.771 1.00 1.00 C ATOM 421 NH1 ARG 74 -10.608 7.852 5.332 1.00 1.00 H ATOM 424 NH2 ARG 74 -12.273 8.504 6.772 1.00 1.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 348 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.38 68.2 88 65.7 134 ARMSMC SECONDARY STRUCTURE . . 26.19 82.4 34 85.0 40 ARMSMC SURFACE . . . . . . . . 58.79 63.8 58 58.0 100 ARMSMC BURIED . . . . . . . . 51.41 76.7 30 88.2 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.53 45.2 42 68.9 61 ARMSSC1 RELIABLE SIDE CHAINS . 77.68 47.4 38 69.1 55 ARMSSC1 SECONDARY STRUCTURE . . 79.81 43.8 16 84.2 19 ARMSSC1 SURFACE . . . . . . . . 83.46 37.9 29 63.0 46 ARMSSC1 BURIED . . . . . . . . 69.96 61.5 13 86.7 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.39 58.3 24 61.5 39 ARMSSC2 RELIABLE SIDE CHAINS . 47.27 63.2 19 63.3 30 ARMSSC2 SECONDARY STRUCTURE . . 68.94 63.6 11 78.6 14 ARMSSC2 SURFACE . . . . . . . . 47.90 64.7 17 53.1 32 ARMSSC2 BURIED . . . . . . . . 85.72 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.74 33.3 9 69.2 13 ARMSSC3 RELIABLE SIDE CHAINS . 82.92 37.5 8 72.7 11 ARMSSC3 SECONDARY STRUCTURE . . 56.51 50.0 2 66.7 3 ARMSSC3 SURFACE . . . . . . . . 87.74 33.3 9 69.2 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 25.07 75.0 4 100.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 25.07 75.0 4 100.0 4 ARMSSC4 SECONDARY STRUCTURE . . 0.07 100.0 1 100.0 1 ARMSSC4 SURFACE . . . . . . . . 25.07 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.34 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.34 45 66.2 68 CRMSCA CRN = ALL/NP . . . . . 0.0519 CRMSCA SECONDARY STRUCTURE . . 1.71 17 85.0 20 CRMSCA SURFACE . . . . . . . . 2.46 30 58.8 51 CRMSCA BURIED . . . . . . . . 2.07 15 88.2 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.38 223 66.4 336 CRMSMC SECONDARY STRUCTURE . . 1.78 85 85.0 100 CRMSMC SURFACE . . . . . . . . 2.53 149 59.1 252 CRMSMC BURIED . . . . . . . . 2.03 74 88.1 84 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.31 168 22.6 742 CRMSSC RELIABLE SIDE CHAINS . 4.24 142 20.3 700 CRMSSC SECONDARY STRUCTURE . . 3.83 76 29.6 257 CRMSSC SURFACE . . . . . . . . 4.66 110 19.6 561 CRMSSC BURIED . . . . . . . . 3.53 58 32.0 181 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.42 348 34.3 1014 CRMSALL SECONDARY STRUCTURE . . 3.02 144 42.7 337 CRMSALL SURFACE . . . . . . . . 3.68 230 30.1 765 CRMSALL BURIED . . . . . . . . 2.85 118 47.4 249 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.115 0.306 0.158 45 66.2 68 ERRCA SECONDARY STRUCTURE . . 0.709 0.253 0.140 17 85.0 20 ERRCA SURFACE . . . . . . . . 1.179 0.305 0.155 30 58.8 51 ERRCA BURIED . . . . . . . . 0.987 0.307 0.164 15 88.2 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.129 0.305 0.161 223 66.4 336 ERRMC SECONDARY STRUCTURE . . 0.734 0.248 0.135 85 85.0 100 ERRMC SURFACE . . . . . . . . 1.224 0.314 0.167 149 59.1 252 ERRMC BURIED . . . . . . . . 0.938 0.288 0.149 74 88.1 84 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.623 0.477 0.239 168 22.6 742 ERRSC RELIABLE SIDE CHAINS . 2.532 0.470 0.235 142 20.3 700 ERRSC SECONDARY STRUCTURE . . 2.282 0.454 0.228 76 29.6 257 ERRSC SURFACE . . . . . . . . 2.869 0.491 0.246 110 19.6 561 ERRSC BURIED . . . . . . . . 2.157 0.451 0.226 58 32.0 181 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.819 0.383 0.197 348 34.3 1014 ERRALL SECONDARY STRUCTURE . . 1.526 0.351 0.182 144 42.7 337 ERRALL SURFACE . . . . . . . . 1.978 0.394 0.203 230 30.1 765 ERRALL BURIED . . . . . . . . 1.508 0.362 0.184 118 47.4 249 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 27 38 44 45 45 68 DISTCA CA (P) 4.41 39.71 55.88 64.71 66.18 68 DISTCA CA (RMS) 0.75 1.47 1.78 2.22 2.34 DISTCA ALL (N) 29 158 239 308 344 348 1014 DISTALL ALL (P) 2.86 15.58 23.57 30.37 33.93 1014 DISTALL ALL (RMS) 0.79 1.45 1.85 2.47 3.17 DISTALL END of the results output