####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 60 ( 462), selected 60 , name T0539TS228_1-D1 # Molecule2: number of CA atoms 68 ( 1014), selected 60 , name T0539-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0539TS228_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 58 23 - 80 4.94 5.40 LONGEST_CONTINUOUS_SEGMENT: 58 24 - 81 4.56 5.47 LCS_AVERAGE: 84.31 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 32 - 76 1.91 6.22 LONGEST_CONTINUOUS_SEGMENT: 45 33 - 77 1.96 6.14 LCS_AVERAGE: 54.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 44 - 68 0.97 6.13 LCS_AVERAGE: 22.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 60 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 22 E 22 5 6 18 3 4 5 5 6 9 10 12 13 13 14 24 27 28 32 33 33 35 38 51 LCS_GDT D 23 D 23 5 6 58 3 4 5 5 6 9 10 12 13 13 14 16 17 17 32 33 33 35 38 38 LCS_GDT H 24 H 24 5 6 58 3 4 5 5 6 9 10 12 13 13 14 16 17 17 32 33 33 36 41 44 LCS_GDT G 25 G 25 5 6 58 3 4 5 5 5 9 10 12 13 30 34 49 50 53 56 56 56 56 57 57 LCS_GDT A 26 A 26 5 6 58 3 4 5 5 5 8 10 12 13 13 14 35 47 53 56 56 56 56 57 57 LCS_GDT V 27 V 27 4 6 58 3 4 4 5 5 8 10 12 13 13 14 16 17 21 26 32 55 56 57 57 LCS_GDT G 28 G 28 4 6 58 3 4 5 5 6 9 10 12 16 20 24 42 51 53 56 56 56 56 57 57 LCS_GDT Q 29 Q 29 4 6 58 3 4 5 5 6 9 12 16 25 42 48 50 51 53 56 56 56 56 57 57 LCS_GDT E 30 E 30 4 12 58 3 4 6 24 32 43 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT M 31 M 31 8 12 58 3 4 11 19 26 36 43 45 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 32 C 32 10 45 58 7 19 26 34 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 33 C 33 10 45 58 9 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 34 P 34 10 45 58 11 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT I 35 I 35 10 45 58 11 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 36 C 36 10 45 58 11 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 37 C 37 10 45 58 6 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT S 38 S 38 10 45 58 7 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT E 39 E 39 10 45 58 7 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT Y 40 Y 40 10 45 58 6 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT V 41 V 41 10 45 58 11 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT K 42 K 42 4 45 58 3 4 8 13 16 31 38 41 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT G 43 G 43 4 45 58 3 4 4 4 5 7 14 23 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT E 44 E 44 25 45 58 6 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT V 45 V 45 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT A 46 A 46 25 45 58 6 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT T 47 T 47 25 45 58 7 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT E 48 E 48 25 45 58 5 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT L 49 L 49 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 50 P 50 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 51 C 51 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT H 52 H 52 25 45 58 4 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT H 53 H 53 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT Y 54 Y 54 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT F 55 F 55 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT H 56 H 56 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT K 57 K 57 25 45 58 4 18 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 58 P 58 25 45 58 6 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 59 C 59 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT V 60 V 60 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT S 61 S 61 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT I 62 I 62 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT W 63 W 63 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT L 64 L 64 25 45 58 9 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT Q 65 Q 65 25 45 58 8 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT K 66 K 66 25 45 58 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT S 67 S 67 25 45 58 5 16 29 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT G 68 G 68 25 45 58 7 15 28 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT T 69 T 69 24 45 58 7 14 28 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 70 C 70 24 45 58 7 20 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 71 P 71 19 45 58 7 18 29 38 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT V 72 V 72 11 45 58 7 18 29 38 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 73 C 73 11 45 58 7 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT R 74 R 74 11 45 58 7 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT C 75 C 75 11 45 58 7 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT M 76 M 76 11 45 58 6 12 27 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT F 77 F 77 11 45 58 3 7 10 18 32 42 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 78 P 78 11 40 58 3 12 15 24 36 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 79 P 79 4 39 58 3 4 6 7 30 36 44 45 48 49 50 50 51 53 56 56 56 56 57 57 LCS_GDT P 80 P 80 4 5 58 3 4 6 7 7 7 7 9 16 19 20 35 50 53 56 56 56 56 57 57 LCS_GDT L 81 L 81 4 5 58 3 4 4 7 7 7 7 14 16 19 20 35 40 51 56 56 56 56 57 57 LCS_AVERAGE LCS_A: 54.00 ( 22.99 54.68 84.31 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 21 30 40 43 44 45 46 49 49 50 50 51 53 56 56 56 56 57 57 GDT PERCENT_AT 16.18 30.88 44.12 58.82 63.24 64.71 66.18 67.65 72.06 72.06 73.53 73.53 75.00 77.94 82.35 82.35 82.35 82.35 83.82 83.82 GDT RMS_LOCAL 0.31 0.73 0.92 1.35 1.44 1.55 1.64 1.74 2.22 2.24 2.31 2.31 2.50 3.08 3.86 3.86 3.86 3.86 4.13 4.13 GDT RMS_ALL_AT 6.52 6.05 6.23 6.38 6.41 6.37 6.46 6.44 6.28 6.25 6.24 6.24 6.21 5.99 5.68 5.68 5.68 5.68 5.60 5.60 # Checking swapping # possible swapping detected: E 22 E 22 # possible swapping detected: E 30 E 30 # possible swapping detected: E 39 E 39 # possible swapping detected: E 48 E 48 # possible swapping detected: F 55 F 55 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 22 E 22 20.327 0 0.699 1.355 20.887 0.000 0.000 LGA D 23 D 23 23.120 0 0.016 1.014 28.225 0.000 0.000 LGA H 24 H 24 18.841 0 0.302 1.122 26.497 0.000 0.000 LGA G 25 G 25 11.865 0 0.697 0.697 14.440 0.000 0.000 LGA A 26 A 26 10.370 0 0.027 0.037 11.240 0.000 0.571 LGA V 27 V 27 13.557 0 0.294 1.110 18.340 0.000 0.000 LGA G 28 G 28 10.054 0 0.118 0.118 10.740 1.071 1.071 LGA Q 29 Q 29 7.142 0 0.252 0.816 10.757 27.262 13.016 LGA E 30 E 30 3.730 0 0.042 1.003 12.925 53.095 25.820 LGA M 31 M 31 4.978 0 0.419 1.252 11.406 31.786 16.845 LGA C 32 C 32 2.643 0 0.088 0.121 3.770 67.143 61.508 LGA C 33 C 33 1.309 0 0.054 0.139 1.780 77.143 83.175 LGA P 34 P 34 1.221 0 0.165 0.260 1.531 81.429 80.204 LGA I 35 I 35 0.528 0 0.089 0.140 1.229 88.214 94.107 LGA C 36 C 36 0.624 0 0.049 0.702 1.812 90.595 87.619 LGA C 37 C 37 1.706 0 0.128 0.732 3.961 75.000 68.016 LGA S 38 S 38 1.905 0 0.062 0.612 2.865 72.857 70.238 LGA E 39 E 39 1.770 0 0.066 0.945 5.068 75.000 60.476 LGA Y 40 Y 40 1.564 0 0.618 0.516 5.022 65.476 55.873 LGA V 41 V 41 0.274 0 0.688 0.580 3.568 76.310 67.347 LGA K 42 K 42 6.871 0 0.581 1.086 15.096 17.024 7.725 LGA G 43 G 43 6.284 0 0.671 0.671 6.284 30.238 30.238 LGA E 44 E 44 1.585 3 0.532 0.572 4.770 71.071 39.894 LGA V 45 V 45 0.597 0 0.095 0.089 0.747 90.476 93.197 LGA A 46 A 46 1.021 0 0.081 0.113 1.052 88.214 86.857 LGA T 47 T 47 1.456 0 0.031 1.231 4.628 79.286 69.456 LGA E 48 E 48 1.860 0 0.183 0.744 3.703 70.833 64.233 LGA L 49 L 49 0.779 0 0.066 0.095 1.338 85.952 89.405 LGA P 50 P 50 1.617 0 0.078 0.172 1.806 75.000 77.823 LGA C 51 C 51 1.515 0 0.046 0.069 1.775 75.000 77.143 LGA H 52 H 52 2.070 0 0.070 0.392 3.623 68.810 60.571 LGA H 53 H 53 1.395 0 0.132 0.443 2.129 79.286 78.143 LGA Y 54 Y 54 1.212 0 0.075 0.093 1.864 81.429 78.571 LGA F 55 F 55 0.983 0 0.028 0.103 1.530 81.548 83.117 LGA H 56 H 56 0.780 0 0.096 0.254 1.078 88.214 88.667 LGA K 57 K 57 1.802 0 0.045 0.061 3.984 75.000 62.804 LGA P 58 P 58 1.599 0 0.062 0.277 2.401 77.143 71.837 LGA C 59 C 59 0.861 0 0.080 0.667 2.039 90.595 86.270 LGA V 60 V 60 0.370 0 0.024 0.042 0.710 95.238 94.558 LGA S 61 S 61 0.989 0 0.056 0.055 1.291 90.476 87.460 LGA I 62 I 62 0.862 0 0.016 0.088 1.322 90.476 87.083 LGA W 63 W 63 0.112 0 0.067 1.285 4.048 100.000 77.415 LGA L 64 L 64 1.256 0 0.054 0.071 2.397 81.548 75.179 LGA Q 65 Q 65 1.477 0 0.214 0.662 5.410 88.333 66.085 LGA K 66 K 66 0.401 0 0.090 0.787 1.876 95.238 87.619 LGA S 67 S 67 1.896 0 0.649 0.765 4.069 65.595 60.714 LGA G 68 G 68 2.059 0 0.158 0.158 2.215 68.810 68.810 LGA T 69 T 69 1.915 0 0.071 0.331 2.360 68.810 67.075 LGA C 70 C 70 1.537 0 0.110 0.123 2.618 69.048 71.746 LGA P 71 P 71 2.322 0 0.103 0.379 2.664 62.857 66.122 LGA V 72 V 72 2.311 0 0.104 0.106 2.965 62.857 63.673 LGA C 73 C 73 1.790 0 0.040 0.081 1.790 72.857 74.286 LGA R 74 R 74 1.405 0 0.033 1.707 10.620 81.429 46.840 LGA C 75 C 75 0.872 0 0.021 0.774 3.891 88.214 79.603 LGA M 76 M 76 1.857 0 0.294 0.873 2.809 67.143 67.262 LGA F 77 F 77 4.253 0 0.112 1.128 5.017 37.500 42.684 LGA P 78 P 78 3.739 0 0.037 0.128 8.203 35.238 25.578 LGA P 79 P 79 5.490 0 0.075 0.114 7.152 26.667 29.592 LGA P 80 P 80 11.690 0 0.091 0.133 14.155 0.119 0.068 LGA L 81 L 81 13.672 0 0.602 0.965 17.407 0.000 0.159 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 60 240 240 100.00 459 459 100.00 68 SUMMARY(RMSD_GDC): 5.344 5.268 6.169 53.764 49.580 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 60 68 4.0 46 1.74 59.926 60.890 2.497 LGA_LOCAL RMSD: 1.742 Number of atoms: 46 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.444 Number of assigned atoms: 60 Std_ASGN_ATOMS RMSD: 5.344 Standard rmsd on all 60 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.531699 * X + 0.699674 * Y + -0.477234 * Z + -45.209740 Y_new = -0.337056 * X + 0.342130 * Y + 0.877121 * Z + 3.371557 Z_new = 0.776975 * X + 0.627218 * Y + 0.053919 * Z + -36.764984 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.576603 -0.889846 1.485042 [DEG: -147.6285 -50.9844 85.0866 ] ZXZ: -2.643297 1.516851 0.891646 [DEG: -151.4498 86.9092 51.0876 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0539TS228_1-D1 REMARK 2: T0539-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0539TS228_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 60 68 4.0 46 1.74 60.890 5.34 REMARK ---------------------------------------------------------- MOLECULE T0539TS228_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0539 REMARK MODEL 1 REMARK PARENT 2ea6_A ATOM 1 N GLU 22 -10.745 10.579 -15.692 1.00 0.00 N ATOM 2 CA GLU 22 -11.745 10.680 -16.789 1.00 0.00 C ATOM 3 C GLU 22 -13.134 10.799 -16.193 1.00 0.00 C ATOM 4 O GLU 22 -13.325 10.542 -15.004 1.00 0.00 O ATOM 5 CB GLU 22 -11.641 9.470 -17.728 1.00 0.00 C ATOM 6 CG GLU 22 -10.449 9.506 -18.694 1.00 0.00 C ATOM 7 CD GLU 22 -9.096 9.385 -18.012 1.00 0.00 C ATOM 8 OE1 GLU 22 -8.978 8.669 -16.995 1.00 0.00 O ATOM 9 OE2 GLU 22 -8.150 10.081 -18.429 1.00 0.00 O ATOM 10 N ASP 23 -14.115 11.196 -16.989 1.00 0.00 N ATOM 11 CA ASP 23 -15.468 11.469 -16.484 1.00 0.00 C ATOM 12 C ASP 23 -16.257 10.167 -16.407 1.00 0.00 C ATOM 13 O ASP 23 -17.419 10.125 -16.005 1.00 0.00 O ATOM 14 CB ASP 23 -16.211 12.428 -17.415 1.00 0.00 C ATOM 15 CG ASP 23 -15.591 13.821 -17.469 1.00 0.00 C ATOM 16 OD1 ASP 23 -14.729 14.188 -16.639 1.00 0.00 O ATOM 17 OD2 ASP 23 -15.951 14.578 -18.402 1.00 0.00 O ATOM 18 N HIS 24 -15.600 9.095 -16.817 1.00 0.00 N ATOM 19 CA HIS 24 -16.170 7.760 -16.841 1.00 0.00 C ATOM 20 C HIS 24 -15.104 6.841 -16.258 1.00 0.00 C ATOM 21 O HIS 24 -13.909 7.156 -16.332 1.00 0.00 O ATOM 22 CB HIS 24 -16.463 7.348 -18.286 1.00 0.00 C ATOM 23 CG HIS 24 -17.245 8.360 -19.066 1.00 0.00 C ATOM 24 ND1 HIS 24 -18.612 8.496 -19.029 1.00 0.00 N ATOM 25 CD2 HIS 24 -16.821 9.305 -19.947 1.00 0.00 C ATOM 26 CE1 HIS 24 -18.952 9.484 -19.863 1.00 0.00 C ATOM 27 NE2 HIS 24 -17.892 10.011 -20.447 1.00 0.00 N ATOM 28 N GLY 25 -15.505 5.682 -15.765 1.00 0.00 N ATOM 29 CA GLY 25 -14.577 4.635 -15.370 1.00 0.00 C ATOM 30 C GLY 25 -15.279 3.371 -15.804 1.00 0.00 C ATOM 31 O GLY 25 -16.473 3.438 -16.114 1.00 0.00 O ATOM 32 N ALA 26 -14.594 2.248 -15.908 1.00 0.00 N ATOM 33 CA ALA 26 -15.233 1.052 -16.444 1.00 0.00 C ATOM 34 C ALA 26 -15.876 0.224 -15.333 1.00 0.00 C ATOM 35 O ALA 26 -15.389 0.191 -14.197 1.00 0.00 O ATOM 36 CB ALA 26 -14.206 0.226 -17.213 1.00 0.00 C ATOM 37 N VAL 27 -16.946 -0.487 -15.652 1.00 0.00 N ATOM 38 CA VAL 27 -17.363 -1.603 -14.807 1.00 0.00 C ATOM 39 C VAL 27 -16.245 -2.628 -15.011 1.00 0.00 C ATOM 40 O VAL 27 -15.633 -2.676 -16.076 1.00 0.00 O ATOM 41 CB VAL 27 -18.776 -2.146 -15.167 1.00 0.00 C ATOM 42 CG1 VAL 27 -19.832 -1.076 -14.876 1.00 0.00 C ATOM 43 CG2 VAL 27 -18.887 -2.591 -16.637 1.00 0.00 C ATOM 44 N GLY 28 -15.904 -3.392 -13.986 1.00 0.00 N ATOM 45 CA GLY 28 -14.786 -4.320 -14.072 1.00 0.00 C ATOM 46 C GLY 28 -13.410 -3.709 -13.854 1.00 0.00 C ATOM 47 O GLY 28 -12.428 -4.449 -13.731 1.00 0.00 O ATOM 48 N GLN 29 -13.313 -2.387 -13.751 1.00 0.00 N ATOM 49 CA GLN 29 -12.033 -1.730 -13.473 1.00 0.00 C ATOM 50 C GLN 29 -11.585 -2.092 -12.059 1.00 0.00 C ATOM 51 O GLN 29 -12.372 -2.054 -11.108 1.00 0.00 O ATOM 52 CB GLN 29 -12.137 -0.207 -13.630 1.00 0.00 C ATOM 53 CG GLN 29 -10.788 0.507 -13.552 1.00 0.00 C ATOM 54 CD GLN 29 -10.847 1.964 -13.947 1.00 0.00 C ATOM 55 OE1 GLN 29 -11.912 2.580 -14.023 1.00 0.00 O ATOM 56 NE2 GLN 29 -9.707 2.539 -14.195 1.00 0.00 N ATOM 57 N GLU 30 -10.333 -2.495 -11.928 1.00 0.00 N ATOM 58 CA GLU 30 -9.791 -2.892 -10.632 1.00 0.00 C ATOM 59 C GLU 30 -9.496 -1.701 -9.720 1.00 0.00 C ATOM 60 O GLU 30 -9.538 -0.546 -10.149 1.00 0.00 O ATOM 61 CB GLU 30 -8.512 -3.702 -10.825 1.00 0.00 C ATOM 62 CG GLU 30 -8.721 -4.970 -11.630 1.00 0.00 C ATOM 63 CD GLU 30 -7.526 -5.905 -11.563 1.00 0.00 C ATOM 64 OE1 GLU 30 -6.594 -5.689 -10.761 1.00 0.00 O ATOM 65 OE2 GLU 30 -7.532 -6.921 -12.288 1.00 0.00 O ATOM 66 N MET 31 -9.153 -1.997 -8.472 1.00 0.00 N ATOM 67 CA MET 31 -8.761 -0.982 -7.489 1.00 0.00 C ATOM 68 C MET 31 -7.445 -0.279 -7.831 1.00 0.00 C ATOM 69 O MET 31 -6.368 -0.675 -7.390 1.00 0.00 O ATOM 70 CB MET 31 -8.615 -1.603 -6.099 1.00 0.00 C ATOM 71 CG MET 31 -9.903 -2.166 -5.534 1.00 0.00 C ATOM 72 SD MET 31 -9.770 -2.667 -3.798 1.00 0.00 S ATOM 73 CE MET 31 -9.726 -1.074 -2.968 1.00 0.00 C ATOM 74 N CYS 32 -7.553 0.778 -8.617 1.00 0.00 N ATOM 75 CA CYS 32 -6.426 1.633 -8.946 1.00 0.00 C ATOM 76 C CYS 32 -5.913 2.295 -7.667 1.00 0.00 C ATOM 77 O CYS 32 -6.693 2.556 -6.747 1.00 0.00 O ATOM 78 CB CYS 32 -6.907 2.674 -9.957 1.00 0.00 C ATOM 79 SG CYS 32 -7.472 1.898 -11.496 1.00 0.00 S ATOM 80 N CYS 33 -4.617 2.570 -7.624 1.00 0.00 N ATOM 81 CA CYS 33 -3.957 3.111 -6.444 1.00 0.00 C ATOM 82 C CYS 33 -4.576 4.470 -6.098 1.00 0.00 C ATOM 83 O CYS 33 -4.551 5.389 -6.921 1.00 0.00 O ATOM 84 CB CYS 33 -2.485 3.241 -6.813 1.00 0.00 C ATOM 85 SG CYS 33 -1.272 3.972 -5.617 1.00 0.00 S ATOM 86 N PRO 34 -5.137 4.626 -4.886 1.00 0.00 N ATOM 87 CA PRO 34 -5.776 5.915 -4.600 1.00 0.00 C ATOM 88 C PRO 34 -4.798 7.045 -4.299 1.00 0.00 C ATOM 89 O PRO 34 -5.200 8.201 -4.197 1.00 0.00 O ATOM 90 CB PRO 34 -6.613 5.596 -3.360 1.00 0.00 C ATOM 91 CG PRO 34 -5.825 4.566 -2.657 1.00 0.00 C ATOM 92 CD PRO 34 -5.297 3.692 -3.755 1.00 0.00 C ATOM 93 N ILE 35 -3.525 6.727 -4.108 1.00 0.00 N ATOM 94 CA ILE 35 -2.562 7.724 -3.648 1.00 0.00 C ATOM 95 C ILE 35 -2.153 8.630 -4.813 1.00 0.00 C ATOM 96 O ILE 35 -2.143 9.853 -4.663 1.00 0.00 O ATOM 97 CB ILE 35 -1.339 7.048 -2.952 1.00 0.00 C ATOM 98 CG1 ILE 35 -1.823 6.194 -1.755 1.00 0.00 C ATOM 99 CG2 ILE 35 -0.342 8.117 -2.452 1.00 0.00 C ATOM 100 CD1 ILE 35 -0.770 5.286 -1.091 1.00 0.00 C ATOM 101 N CYS 36 -1.869 8.065 -5.981 1.00 0.00 N ATOM 102 CA CYS 36 -1.524 8.848 -7.169 1.00 0.00 C ATOM 103 C CYS 36 -2.603 8.777 -8.258 1.00 0.00 C ATOM 104 O CYS 36 -2.454 9.360 -9.339 1.00 0.00 O ATOM 105 CB CYS 36 -0.159 8.382 -7.675 1.00 0.00 C ATOM 106 SG CYS 36 -0.129 6.591 -8.152 1.00 0.00 S ATOM 107 N CYS 37 -3.690 8.094 -7.920 1.00 0.00 N ATOM 108 CA CYS 37 -4.879 7.948 -8.764 1.00 0.00 C ATOM 109 C CYS 37 -4.540 7.334 -10.120 1.00 0.00 C ATOM 110 O CYS 37 -4.795 7.930 -11.175 1.00 0.00 O ATOM 111 CB CYS 37 -5.600 9.290 -8.896 1.00 0.00 C ATOM 112 SG CYS 37 -5.847 10.074 -7.286 1.00 0.00 S ATOM 113 N SER 38 -3.919 6.163 -10.096 1.00 0.00 N ATOM 114 CA SER 38 -3.473 5.538 -11.336 1.00 0.00 C ATOM 115 C SER 38 -3.592 4.023 -11.393 1.00 0.00 C ATOM 116 O SER 38 -3.673 3.326 -10.381 1.00 0.00 O ATOM 117 CB SER 38 -2.031 5.957 -11.614 1.00 0.00 C ATOM 118 OG SER 38 -1.130 5.404 -10.679 1.00 0.00 O ATOM 119 N GLU 39 -3.621 3.547 -12.628 1.00 0.00 N ATOM 120 CA GLU 39 -3.768 2.138 -12.967 1.00 0.00 C ATOM 121 C GLU 39 -2.610 1.301 -12.434 1.00 0.00 C ATOM 122 O GLU 39 -1.509 1.808 -12.216 1.00 0.00 O ATOM 123 CB GLU 39 -3.741 2.002 -14.495 1.00 0.00 C ATOM 124 CG GLU 39 -4.756 2.823 -15.285 1.00 0.00 C ATOM 125 CD GLU 39 -6.195 2.320 -15.223 1.00 0.00 C ATOM 126 OE1 GLU 39 -6.486 1.218 -14.714 1.00 0.00 O ATOM 127 OE2 GLU 39 -7.063 3.036 -15.756 1.00 0.00 O ATOM 128 N TYR 40 -2.804 -0.006 -12.359 1.00 0.00 N ATOM 129 CA TYR 40 -1.726 -0.919 -11.979 1.00 0.00 C ATOM 130 C TYR 40 -0.586 -0.862 -12.996 1.00 0.00 C ATOM 131 O TYR 40 0.583 -0.959 -12.637 1.00 0.00 O ATOM 132 CB TYR 40 -2.245 -2.355 -11.906 1.00 0.00 C ATOM 133 CG TYR 40 -3.105 -2.657 -10.697 1.00 0.00 C ATOM 134 CD1 TYR 40 -4.483 -2.363 -10.687 1.00 0.00 C ATOM 135 CD2 TYR 40 -2.544 -3.275 -9.559 1.00 0.00 C ATOM 136 CE1 TYR 40 -5.285 -2.683 -9.567 1.00 0.00 C ATOM 137 CE2 TYR 40 -3.354 -3.613 -8.439 1.00 0.00 C ATOM 138 CZ TYR 40 -4.720 -3.327 -8.466 1.00 0.00 C ATOM 139 OH TYR 40 -5.517 -3.687 -7.420 1.00 0.00 O ATOM 140 N VAL 41 -0.911 -0.661 -14.264 1.00 0.00 N ATOM 141 CA VAL 41 0.110 -0.553 -15.314 1.00 0.00 C ATOM 142 C VAL 41 0.865 0.778 -15.299 1.00 0.00 C ATOM 143 O VAL 41 1.929 0.910 -15.902 1.00 0.00 O ATOM 144 CB VAL 41 -0.504 -0.793 -16.721 1.00 0.00 C ATOM 145 CG1 VAL 41 -1.120 -2.188 -16.782 1.00 0.00 C ATOM 146 CG2 VAL 41 -1.577 0.251 -17.085 1.00 0.00 C ATOM 147 N LYS 42 0.348 1.752 -14.560 1.00 0.00 N ATOM 148 CA LYS 42 0.996 3.060 -14.403 1.00 0.00 C ATOM 149 C LYS 42 1.793 3.049 -13.107 1.00 0.00 C ATOM 150 O LYS 42 2.455 4.030 -12.765 1.00 0.00 O ATOM 151 CB LYS 42 -0.052 4.177 -14.412 1.00 0.00 C ATOM 152 CG LYS 42 -0.751 4.319 -15.762 1.00 0.00 C ATOM 153 CD LYS 42 -1.857 5.368 -15.784 1.00 0.00 C ATOM 154 CE LYS 42 -2.502 5.386 -17.170 1.00 0.00 C ATOM 155 NZ LYS 42 -3.589 6.407 -17.374 1.00 0.00 N ATOM 156 N GLY 43 1.740 1.925 -12.407 1.00 0.00 N ATOM 157 CA GLY 43 2.518 1.709 -11.202 1.00 0.00 C ATOM 158 C GLY 43 3.762 0.925 -11.547 1.00 0.00 C ATOM 159 O GLY 43 3.860 0.359 -12.632 1.00 0.00 O ATOM 160 N GLU 44 4.722 0.897 -10.639 1.00 0.00 N ATOM 161 CA GLU 44 5.967 0.159 -10.846 1.00 0.00 C ATOM 162 C GLU 44 5.867 -1.221 -10.208 1.00 0.00 C ATOM 163 O GLU 44 6.003 -2.238 -10.881 1.00 0.00 O ATOM 164 CB GLU 44 7.110 0.945 -10.205 1.00 0.00 C ATOM 165 CG GLU 44 8.499 0.392 -10.458 1.00 0.00 C ATOM 166 CD GLU 44 9.567 1.133 -9.671 1.00 0.00 C ATOM 167 OE1 GLU 44 9.271 2.146 -8.985 1.00 0.00 O ATOM 168 OE2 GLU 44 10.727 0.671 -9.691 1.00 0.00 O ATOM 169 N VAL 45 5.596 -1.241 -8.912 1.00 0.00 N ATOM 170 CA VAL 45 5.406 -2.470 -8.145 1.00 0.00 C ATOM 171 C VAL 45 4.111 -2.235 -7.390 1.00 0.00 C ATOM 172 O VAL 45 3.995 -1.227 -6.689 1.00 0.00 O ATOM 173 CB VAL 45 6.576 -2.724 -7.145 1.00 0.00 C ATOM 174 CG1 VAL 45 6.333 -3.983 -6.298 1.00 0.00 C ATOM 175 CG2 VAL 45 7.908 -2.860 -7.887 1.00 0.00 C ATOM 176 N ALA 46 3.128 -3.104 -7.556 1.00 0.00 N ATOM 177 CA ALA 46 1.867 -2.965 -6.837 1.00 0.00 C ATOM 178 C ALA 46 2.030 -3.577 -5.438 1.00 0.00 C ATOM 179 O ALA 46 2.785 -4.537 -5.258 1.00 0.00 O ATOM 180 CB ALA 46 0.746 -3.648 -7.614 1.00 0.00 C ATOM 181 N THR 47 1.331 -3.016 -4.467 1.00 0.00 N ATOM 182 CA THR 47 1.359 -3.450 -3.071 1.00 0.00 C ATOM 183 C THR 47 -0.077 -3.497 -2.583 1.00 0.00 C ATOM 184 O THR 47 -0.987 -3.063 -3.294 1.00 0.00 O ATOM 185 CB THR 47 2.128 -2.450 -2.195 1.00 0.00 C ATOM 186 OG1 THR 47 1.762 -1.122 -2.573 1.00 0.00 O ATOM 187 CG2 THR 47 3.618 -2.589 -2.374 1.00 0.00 C ATOM 188 N GLU 48 -0.298 -4.007 -1.381 1.00 0.00 N ATOM 189 CA GLU 48 -1.633 -4.105 -0.807 1.00 0.00 C ATOM 190 C GLU 48 -1.522 -4.053 0.709 1.00 0.00 C ATOM 191 O GLU 48 -0.434 -4.273 1.247 1.00 0.00 O ATOM 192 CB GLU 48 -2.292 -5.415 -1.252 1.00 0.00 C ATOM 193 CG GLU 48 -1.645 -6.680 -0.714 1.00 0.00 C ATOM 194 CD GLU 48 -2.130 -7.911 -1.450 1.00 0.00 C ATOM 195 OE1 GLU 48 -2.930 -8.691 -0.889 1.00 0.00 O ATOM 196 OE2 GLU 48 -1.683 -8.138 -2.601 1.00 0.00 O ATOM 197 N LEU 49 -2.632 -3.800 1.386 1.00 0.00 N ATOM 198 CA LEU 49 -2.697 -3.846 2.848 1.00 0.00 C ATOM 199 C LEU 49 -3.794 -4.864 3.153 1.00 0.00 C ATOM 200 O LEU 49 -4.705 -5.044 2.330 1.00 0.00 O ATOM 201 CB LEU 49 -3.026 -2.466 3.448 1.00 0.00 C ATOM 202 CG LEU 49 -1.995 -1.333 3.292 1.00 0.00 C ATOM 203 CD1 LEU 49 -2.534 -0.069 3.963 1.00 0.00 C ATOM 204 CD2 LEU 49 -0.622 -1.655 3.860 1.00 0.00 C ATOM 205 N PRO 50 -3.733 -5.549 4.310 1.00 0.00 N ATOM 206 CA PRO 50 -4.706 -6.625 4.543 1.00 0.00 C ATOM 207 C PRO 50 -6.150 -6.205 4.806 1.00 0.00 C ATOM 208 O PRO 50 -7.032 -7.060 4.871 1.00 0.00 O ATOM 209 CB PRO 50 -4.127 -7.340 5.766 1.00 0.00 C ATOM 210 CG PRO 50 -3.454 -6.269 6.512 1.00 0.00 C ATOM 211 CD PRO 50 -2.781 -5.461 5.436 1.00 0.00 C ATOM 212 N CYS 51 -6.426 -4.912 4.905 1.00 0.00 N ATOM 213 CA CYS 51 -7.773 -4.405 5.088 1.00 0.00 C ATOM 214 C CYS 51 -8.557 -4.315 3.762 1.00 0.00 C ATOM 215 O CYS 51 -9.625 -3.698 3.711 1.00 0.00 O ATOM 216 CB CYS 51 -7.614 -3.033 5.733 1.00 0.00 C ATOM 217 SG CYS 51 -6.832 -1.806 4.585 1.00 0.00 S ATOM 218 N HIS 52 -8.000 -4.954 2.737 1.00 0.00 N ATOM 219 CA HIS 52 -8.529 -5.055 1.370 1.00 0.00 C ATOM 220 C HIS 52 -8.410 -3.776 0.555 1.00 0.00 C ATOM 221 O HIS 52 -9.386 -3.241 0.020 1.00 0.00 O ATOM 222 CB HIS 52 -9.940 -5.661 1.328 1.00 0.00 C ATOM 223 CG HIS 52 -10.042 -6.962 2.061 1.00 0.00 C ATOM 224 ND1 HIS 52 -9.455 -8.120 1.596 1.00 0.00 N ATOM 225 CD2 HIS 52 -10.646 -7.264 3.244 1.00 0.00 C ATOM 226 CE1 HIS 52 -9.749 -9.082 2.523 1.00 0.00 C ATOM 227 NE2 HIS 52 -10.465 -8.584 3.561 1.00 0.00 N ATOM 228 N HIS 53 -7.179 -3.292 0.442 1.00 0.00 N ATOM 229 CA HIS 53 -6.867 -2.140 -0.404 1.00 0.00 C ATOM 230 C HIS 53 -5.577 -2.393 -1.165 1.00 0.00 C ATOM 231 O HIS 53 -4.749 -3.170 -0.692 1.00 0.00 O ATOM 232 CB HIS 53 -6.711 -0.893 0.457 1.00 0.00 C ATOM 233 CG HIS 53 -7.919 -0.587 1.279 1.00 0.00 C ATOM 234 ND1 HIS 53 -8.054 -1.005 2.576 1.00 0.00 N ATOM 235 CD2 HIS 53 -9.019 0.149 0.987 1.00 0.00 C ATOM 236 CE1 HIS 53 -9.324 -0.657 2.949 1.00 0.00 C ATOM 237 NE2 HIS 53 -9.905 0.139 2.032 1.00 0.00 N ATOM 238 N TYR 54 -5.398 -1.728 -2.297 1.00 0.00 N ATOM 239 CA TYR 54 -4.223 -1.898 -3.151 1.00 0.00 C ATOM 240 C TYR 54 -3.639 -0.528 -3.449 1.00 0.00 C ATOM 241 O TYR 54 -4.362 0.468 -3.393 1.00 0.00 O ATOM 242 CB TYR 54 -4.592 -2.567 -4.471 1.00 0.00 C ATOM 243 CG TYR 54 -5.135 -3.972 -4.328 1.00 0.00 C ATOM 244 CD1 TYR 54 -6.522 -4.206 -4.278 1.00 0.00 C ATOM 245 CD2 TYR 54 -4.266 -5.078 -4.295 1.00 0.00 C ATOM 246 CE1 TYR 54 -7.038 -5.526 -4.259 1.00 0.00 C ATOM 247 CE2 TYR 54 -4.775 -6.403 -4.247 1.00 0.00 C ATOM 248 CZ TYR 54 -6.156 -6.610 -4.255 1.00 0.00 C ATOM 249 OH TYR 54 -6.657 -7.884 -4.253 1.00 0.00 O ATOM 250 N PHE 55 -2.340 -0.499 -3.704 1.00 0.00 N ATOM 251 CA PHE 55 -1.540 0.721 -3.800 1.00 0.00 C ATOM 252 C PHE 55 -0.348 0.395 -4.694 1.00 0.00 C ATOM 253 O PHE 55 -0.249 -0.726 -5.196 1.00 0.00 O ATOM 254 CB PHE 55 -0.999 1.089 -2.413 1.00 0.00 C ATOM 255 CG PHE 55 -2.060 1.251 -1.368 1.00 0.00 C ATOM 256 CD1 PHE 55 -2.370 0.196 -0.493 1.00 0.00 C ATOM 257 CD2 PHE 55 -2.770 2.454 -1.264 1.00 0.00 C ATOM 258 CE1 PHE 55 -3.383 0.343 0.479 1.00 0.00 C ATOM 259 CE2 PHE 55 -3.752 2.632 -0.266 1.00 0.00 C ATOM 260 CZ PHE 55 -4.054 1.573 0.617 1.00 0.00 C ATOM 261 N HIS 56 0.616 1.301 -4.794 1.00 0.00 N ATOM 262 CA HIS 56 1.932 0.967 -5.354 1.00 0.00 C ATOM 263 C HIS 56 2.994 1.130 -4.272 1.00 0.00 C ATOM 264 O HIS 56 2.785 1.856 -3.297 1.00 0.00 O ATOM 265 CB HIS 56 2.295 1.847 -6.550 1.00 0.00 C ATOM 266 CG HIS 56 1.224 1.941 -7.592 1.00 0.00 C ATOM 267 ND1 HIS 56 0.981 3.103 -8.285 1.00 0.00 N ATOM 268 CD2 HIS 56 0.349 1.006 -8.054 1.00 0.00 C ATOM 269 CE1 HIS 56 -0.068 2.828 -9.116 1.00 0.00 C ATOM 270 NE2 HIS 56 -0.482 1.544 -9.002 1.00 0.00 N ATOM 271 N LYS 57 4.132 0.473 -4.450 1.00 0.00 N ATOM 272 CA LYS 57 5.216 0.478 -3.462 1.00 0.00 C ATOM 273 C LYS 57 5.750 1.841 -3.026 1.00 0.00 C ATOM 274 O LYS 57 5.806 2.070 -1.814 1.00 0.00 O ATOM 275 CB LYS 57 6.348 -0.434 -3.956 1.00 0.00 C ATOM 276 CG LYS 57 7.519 -0.609 -2.997 1.00 0.00 C ATOM 277 CD LYS 57 8.503 -1.643 -3.537 1.00 0.00 C ATOM 278 CE LYS 57 9.698 -1.817 -2.604 1.00 0.00 C ATOM 279 NZ LYS 57 10.645 -2.873 -3.093 1.00 0.00 N ATOM 280 N PRO 58 6.131 2.755 -3.948 1.00 0.00 N ATOM 281 CA PRO 58 6.655 3.985 -3.336 1.00 0.00 C ATOM 282 C PRO 58 5.608 4.798 -2.583 1.00 0.00 C ATOM 283 O PRO 58 5.898 5.400 -1.543 1.00 0.00 O ATOM 284 CB PRO 58 7.151 4.792 -4.542 1.00 0.00 C ATOM 285 CG PRO 58 7.360 3.786 -5.611 1.00 0.00 C ATOM 286 CD PRO 58 6.211 2.844 -5.419 1.00 0.00 C ATOM 287 N CYS 59 4.384 4.766 -3.096 1.00 0.00 N ATOM 288 CA CYS 59 3.278 5.507 -2.536 1.00 0.00 C ATOM 289 C CYS 59 2.957 5.048 -1.116 1.00 0.00 C ATOM 290 O CYS 59 2.853 5.849 -0.184 1.00 0.00 O ATOM 291 CB CYS 59 2.084 5.232 -3.450 1.00 0.00 C ATOM 292 SG CYS 59 2.426 5.391 -5.257 1.00 0.00 S ATOM 293 N VAL 60 2.783 3.741 -0.977 1.00 0.00 N ATOM 294 CA VAL 60 2.379 3.180 0.303 1.00 0.00 C ATOM 295 C VAL 60 3.537 3.267 1.284 1.00 0.00 C ATOM 296 O VAL 60 3.306 3.471 2.459 1.00 0.00 O ATOM 297 CB VAL 60 1.797 1.736 0.181 1.00 0.00 C ATOM 298 CG1 VAL 60 2.880 0.666 -0.004 1.00 0.00 C ATOM 299 CG2 VAL 60 0.909 1.390 1.386 1.00 0.00 C ATOM 300 N SER 61 4.783 3.195 0.832 1.00 0.00 N ATOM 301 CA SER 61 5.899 3.261 1.776 1.00 0.00 C ATOM 302 C SER 61 5.956 4.641 2.411 1.00 0.00 C ATOM 303 O SER 61 6.153 4.776 3.613 1.00 0.00 O ATOM 304 CB SER 61 7.231 2.947 1.094 1.00 0.00 C ATOM 305 OG SER 61 7.187 1.661 0.497 1.00 0.00 O ATOM 306 N ILE 62 5.706 5.678 1.624 1.00 0.00 N ATOM 307 CA ILE 62 5.661 7.027 2.179 1.00 0.00 C ATOM 308 C ILE 62 4.407 7.166 3.040 1.00 0.00 C ATOM 309 O ILE 62 4.455 7.763 4.108 1.00 0.00 O ATOM 310 CB ILE 62 5.726 8.112 1.077 1.00 0.00 C ATOM 311 CG1 ILE 62 7.094 8.036 0.373 1.00 0.00 C ATOM 312 CG2 ILE 62 5.530 9.511 1.690 1.00 0.00 C ATOM 313 CD1 ILE 62 7.225 8.874 -0.904 1.00 0.00 C ATOM 314 N TRP 63 3.284 6.584 2.654 1.00 0.00 N ATOM 315 CA TRP 63 2.119 6.663 3.531 1.00 0.00 C ATOM 316 C TRP 63 2.290 5.910 4.849 1.00 0.00 C ATOM 317 O TRP 63 1.750 6.340 5.857 1.00 0.00 O ATOM 318 CB TRP 63 0.828 6.256 2.828 1.00 0.00 C ATOM 319 CG TRP 63 0.009 7.478 2.518 1.00 0.00 C ATOM 320 CD1 TRP 63 -0.240 8.019 1.298 1.00 0.00 C ATOM 321 CD2 TRP 63 -0.657 8.341 3.461 1.00 0.00 C ATOM 322 NE1 TRP 63 -1.037 9.128 1.392 1.00 0.00 N ATOM 323 CE2 TRP 63 -1.296 9.371 2.713 1.00 0.00 C ATOM 324 CE3 TRP 63 -0.793 8.344 4.866 1.00 0.00 C ATOM 325 CZ2 TRP 63 -2.041 10.399 3.328 1.00 0.00 C ATOM 326 CZ3 TRP 63 -1.519 9.394 5.490 1.00 0.00 C ATOM 327 CH2 TRP 63 -2.128 10.414 4.708 1.00 0.00 C ATOM 328 N LEU 64 3.098 4.862 4.896 1.00 0.00 N ATOM 329 CA LEU 64 3.422 4.215 6.168 1.00 0.00 C ATOM 330 C LEU 64 4.335 5.099 7.012 1.00 0.00 C ATOM 331 O LEU 64 4.232 5.130 8.234 1.00 0.00 O ATOM 332 CB LEU 64 4.089 2.856 5.938 1.00 0.00 C ATOM 333 CG LEU 64 3.245 1.734 5.314 1.00 0.00 C ATOM 334 CD1 LEU 64 4.132 0.531 5.019 1.00 0.00 C ATOM 335 CD2 LEU 64 2.085 1.316 6.201 1.00 0.00 C ATOM 336 N GLN 65 5.200 5.883 6.385 1.00 0.00 N ATOM 337 CA GLN 65 5.994 6.862 7.132 1.00 0.00 C ATOM 338 C GLN 65 5.066 7.945 7.691 1.00 0.00 C ATOM 339 O GLN 65 5.211 8.381 8.833 1.00 0.00 O ATOM 340 CB GLN 65 7.038 7.519 6.227 1.00 0.00 C ATOM 341 CG GLN 65 8.106 6.592 5.669 1.00 0.00 C ATOM 342 CD GLN 65 8.850 7.222 4.506 1.00 0.00 C ATOM 343 OE1 GLN 65 8.833 8.435 4.317 1.00 0.00 O ATOM 344 NE2 GLN 65 9.476 6.412 3.701 1.00 0.00 N ATOM 345 N LYS 66 4.080 8.351 6.902 1.00 0.00 N ATOM 346 CA LYS 66 3.097 9.353 7.326 1.00 0.00 C ATOM 347 C LYS 66 2.134 8.880 8.406 1.00 0.00 C ATOM 348 O LYS 66 1.620 9.718 9.154 1.00 0.00 O ATOM 349 CB LYS 66 2.236 9.793 6.136 1.00 0.00 C ATOM 350 CG LYS 66 2.925 10.667 5.104 1.00 0.00 C ATOM 351 CD LYS 66 1.984 10.955 3.940 1.00 0.00 C ATOM 352 CE LYS 66 2.633 11.859 2.900 1.00 0.00 C ATOM 353 NZ LYS 66 1.715 12.092 1.734 1.00 0.00 N ATOM 354 N SER 67 1.818 7.594 8.442 1.00 0.00 N ATOM 355 CA SER 67 0.714 7.083 9.250 1.00 0.00 C ATOM 356 C SER 67 0.858 5.614 9.641 1.00 0.00 C ATOM 357 O SER 67 1.334 4.804 8.857 1.00 0.00 O ATOM 358 CB SER 67 -0.545 7.202 8.395 1.00 0.00 C ATOM 359 OG SER 67 -1.716 6.836 9.096 1.00 0.00 O ATOM 360 N GLY 68 0.366 5.251 10.818 1.00 0.00 N ATOM 361 CA GLY 68 0.297 3.852 11.213 1.00 0.00 C ATOM 362 C GLY 68 -1.025 3.225 10.805 1.00 0.00 C ATOM 363 O GLY 68 -1.253 2.023 10.959 1.00 0.00 O ATOM 364 N THR 69 -1.932 4.053 10.313 1.00 0.00 N ATOM 365 CA THR 69 -3.248 3.606 9.870 1.00 0.00 C ATOM 366 C THR 69 -3.356 3.828 8.373 1.00 0.00 C ATOM 367 O THR 69 -2.613 4.626 7.797 1.00 0.00 O ATOM 368 CB THR 69 -4.376 4.380 10.572 1.00 0.00 C ATOM 369 OG1 THR 69 -4.204 5.781 10.369 1.00 0.00 O ATOM 370 CG2 THR 69 -4.365 4.153 12.060 1.00 0.00 C ATOM 371 N CYS 70 -4.271 3.105 7.746 1.00 0.00 N ATOM 372 CA CYS 70 -4.398 3.112 6.301 1.00 0.00 C ATOM 373 C CYS 70 -4.746 4.494 5.734 1.00 0.00 C ATOM 374 O CYS 70 -5.598 5.190 6.292 1.00 0.00 O ATOM 375 CB CYS 70 -5.523 2.140 5.971 1.00 0.00 C ATOM 376 SG CYS 70 -5.904 1.966 4.181 1.00 0.00 S ATOM 377 N PRO 71 -4.169 4.883 4.583 1.00 0.00 N ATOM 378 CA PRO 71 -4.653 6.163 4.054 1.00 0.00 C ATOM 379 C PRO 71 -6.092 6.149 3.531 1.00 0.00 C ATOM 380 O PRO 71 -6.660 7.217 3.319 1.00 0.00 O ATOM 381 CB PRO 71 -3.671 6.441 2.918 1.00 0.00 C ATOM 382 CG PRO 71 -3.279 5.106 2.436 1.00 0.00 C ATOM 383 CD PRO 71 -3.140 4.296 3.701 1.00 0.00 C ATOM 384 N VAL 72 -6.691 4.984 3.315 1.00 0.00 N ATOM 385 CA VAL 72 -8.034 4.925 2.725 1.00 0.00 C ATOM 386 C VAL 72 -9.143 4.911 3.769 1.00 0.00 C ATOM 387 O VAL 72 -10.092 5.690 3.669 1.00 0.00 O ATOM 388 CB VAL 72 -8.196 3.672 1.815 1.00 0.00 C ATOM 389 CG1 VAL 72 -9.553 3.656 1.107 1.00 0.00 C ATOM 390 CG2 VAL 72 -7.087 3.639 0.771 1.00 0.00 C ATOM 391 N CYS 73 -9.044 4.025 4.752 1.00 0.00 N ATOM 392 CA CYS 73 -10.118 3.818 5.716 1.00 0.00 C ATOM 393 C CYS 73 -9.751 4.260 7.134 1.00 0.00 C ATOM 394 O CYS 73 -10.585 4.221 8.045 1.00 0.00 O ATOM 395 CB CYS 73 -10.506 2.339 5.659 1.00 0.00 C ATOM 396 SG CYS 73 -9.100 1.170 5.915 1.00 0.00 S ATOM 397 N ARG 74 -8.489 4.648 7.293 1.00 0.00 N ATOM 398 CA ARG 74 -7.876 5.075 8.563 1.00 0.00 C ATOM 399 C ARG 74 -7.939 4.019 9.665 1.00 0.00 C ATOM 400 O ARG 74 -7.785 4.336 10.842 1.00 0.00 O ATOM 401 CB ARG 74 -8.459 6.408 9.069 1.00 0.00 C ATOM 402 CG ARG 74 -8.491 7.586 8.081 1.00 0.00 C ATOM 403 CD ARG 74 -7.132 7.983 7.510 1.00 0.00 C ATOM 404 NE ARG 74 -6.147 8.379 8.531 1.00 0.00 N ATOM 405 CZ ARG 74 -4.832 8.228 8.455 1.00 0.00 C ATOM 406 NH1 ARG 74 -4.092 8.726 9.400 1.00 0.00 N ATOM 407 NH2 ARG 74 -4.226 7.576 7.502 1.00 0.00 N ATOM 408 N CYS 75 -8.145 2.762 9.306 1.00 0.00 N ATOM 409 CA CYS 75 -8.179 1.702 10.308 1.00 0.00 C ATOM 410 C CYS 75 -6.756 1.304 10.694 1.00 0.00 C ATOM 411 O CYS 75 -5.832 1.426 9.881 1.00 0.00 O ATOM 412 CB CYS 75 -8.911 0.481 9.748 1.00 0.00 C ATOM 413 SG CYS 75 -10.580 0.868 9.160 1.00 0.00 S ATOM 414 N MET 76 -6.589 0.765 11.894 1.00 0.00 N ATOM 415 CA MET 76 -5.334 0.131 12.295 1.00 0.00 C ATOM 416 C MET 76 -5.328 -1.278 11.714 1.00 0.00 C ATOM 417 O MET 76 -5.661 -2.250 12.389 1.00 0.00 O ATOM 418 CB MET 76 -5.174 0.040 13.818 1.00 0.00 C ATOM 419 CG MET 76 -4.993 1.378 14.520 1.00 0.00 C ATOM 420 SD MET 76 -4.634 1.220 16.284 1.00 0.00 S ATOM 421 CE MET 76 -2.926 0.580 16.301 1.00 0.00 C ATOM 422 N PHE 77 -4.979 -1.379 10.445 1.00 0.00 N ATOM 423 CA PHE 77 -4.834 -2.676 9.795 1.00 0.00 C ATOM 424 C PHE 77 -3.636 -3.351 10.480 1.00 0.00 C ATOM 425 O PHE 77 -2.706 -2.656 10.924 1.00 0.00 O ATOM 426 CB PHE 77 -4.595 -2.483 8.291 1.00 0.00 C ATOM 427 CG PHE 77 -3.327 -1.734 7.979 1.00 0.00 C ATOM 428 CD1 PHE 77 -2.132 -2.437 7.761 1.00 0.00 C ATOM 429 CD2 PHE 77 -3.303 -0.326 7.963 1.00 0.00 C ATOM 430 CE1 PHE 77 -0.909 -1.755 7.610 1.00 0.00 C ATOM 431 CE2 PHE 77 -2.081 0.372 7.802 1.00 0.00 C ATOM 432 CZ PHE 77 -0.884 -0.348 7.644 1.00 0.00 C ATOM 433 N PRO 78 -3.642 -4.686 10.621 1.00 0.00 N ATOM 434 CA PRO 78 -2.490 -5.291 11.299 1.00 0.00 C ATOM 435 C PRO 78 -1.292 -5.424 10.362 1.00 0.00 C ATOM 436 O PRO 78 -1.456 -5.387 9.140 1.00 0.00 O ATOM 437 CB PRO 78 -3.026 -6.670 11.685 1.00 0.00 C ATOM 438 CG PRO 78 -3.928 -7.009 10.569 1.00 0.00 C ATOM 439 CD PRO 78 -4.630 -5.714 10.244 1.00 0.00 C ATOM 440 N PRO 79 -0.083 -5.646 10.906 1.00 0.00 N ATOM 441 CA PRO 79 0.983 -6.025 9.970 1.00 0.00 C ATOM 442 C PRO 79 0.660 -7.338 9.242 1.00 0.00 C ATOM 443 O PRO 79 -0.130 -8.153 9.744 1.00 0.00 O ATOM 444 CB PRO 79 2.194 -6.220 10.892 1.00 0.00 C ATOM 445 CG PRO 79 1.881 -5.435 12.102 1.00 0.00 C ATOM 446 CD PRO 79 0.412 -5.659 12.295 1.00 0.00 C ATOM 447 N PRO 80 1.262 -7.583 8.064 1.00 0.00 N ATOM 448 CA PRO 80 0.992 -8.868 7.406 1.00 0.00 C ATOM 449 C PRO 80 1.456 -10.069 8.226 1.00 0.00 C ATOM 450 O PRO 80 2.401 -9.960 9.023 1.00 0.00 O ATOM 451 CB PRO 80 1.815 -8.773 6.119 1.00 0.00 C ATOM 452 CG PRO 80 1.978 -7.323 5.889 1.00 0.00 C ATOM 453 CD PRO 80 2.201 -6.780 7.261 1.00 0.00 C ATOM 454 N LEU 81 0.797 -11.207 8.042 1.00 0.00 N ATOM 455 CA LEU 81 1.129 -12.430 8.782 1.00 0.00 C ATOM 456 C LEU 81 2.521 -12.941 8.444 1.00 0.00 C ATOM 457 O LEU 81 3.237 -13.342 9.381 1.00 0.00 O ATOM 458 OXT LEU 81 2.909 -12.928 7.252 1.00 0.00 O ATOM 459 CB LEU 81 0.102 -13.534 8.488 1.00 0.00 C ATOM 460 CG LEU 81 -1.343 -13.371 8.975 1.00 0.00 C ATOM 461 CD1 LEU 81 -2.182 -14.512 8.419 1.00 0.00 C ATOM 462 CD2 LEU 81 -1.433 -13.377 10.494 1.00 0.00 C TER 463 LEU 81 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 53.87 69.5 118 88.1 134 ARMSMC SECONDARY STRUCTURE . . 20.10 82.4 34 85.0 40 ARMSMC SURFACE . . . . . . . . 54.56 72.1 86 86.0 100 ARMSMC BURIED . . . . . . . . 51.96 62.5 32 94.1 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.49 57.4 54 88.5 61 ARMSSC1 RELIABLE SIDE CHAINS . 73.46 55.1 49 89.1 55 ARMSSC1 SECONDARY STRUCTURE . . 57.78 62.5 16 84.2 19 ARMSSC1 SURFACE . . . . . . . . 75.83 52.5 40 87.0 46 ARMSSC1 BURIED . . . . . . . . 57.31 71.4 14 93.3 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 60.28 64.7 34 87.2 39 ARMSSC2 RELIABLE SIDE CHAINS . 57.54 66.7 27 90.0 30 ARMSSC2 SECONDARY STRUCTURE . . 52.23 72.7 11 78.6 14 ARMSSC2 SURFACE . . . . . . . . 67.03 59.3 27 84.4 32 ARMSSC2 BURIED . . . . . . . . 17.82 85.7 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.61 33.3 12 92.3 13 ARMSSC3 RELIABLE SIDE CHAINS . 79.83 40.0 10 90.9 11 ARMSSC3 SECONDARY STRUCTURE . . 12.60 100.0 2 66.7 3 ARMSSC3 SURFACE . . . . . . . . 89.61 33.3 12 92.3 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 52.60 75.0 4 100.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 52.60 75.0 4 100.0 4 ARMSSC4 SECONDARY STRUCTURE . . 0.65 100.0 1 100.0 1 ARMSSC4 SURFACE . . . . . . . . 52.60 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.34 (Number of atoms: 60) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.34 60 88.2 68 CRMSCA CRN = ALL/NP . . . . . 0.0891 CRMSCA SECONDARY STRUCTURE . . 2.15 17 85.0 20 CRMSCA SURFACE . . . . . . . . 5.79 44 86.3 51 CRMSCA BURIED . . . . . . . . 3.84 16 94.1 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.41 296 88.1 336 CRMSMC SECONDARY STRUCTURE . . 2.15 85 85.0 100 CRMSMC SURFACE . . . . . . . . 5.82 217 86.1 252 CRMSMC BURIED . . . . . . . . 4.08 79 94.0 84 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.04 219 29.5 742 CRMSSC RELIABLE SIDE CHAINS . 6.76 183 26.1 700 CRMSSC SECONDARY STRUCTURE . . 2.59 76 29.6 257 CRMSSC SURFACE . . . . . . . . 7.79 158 28.2 561 CRMSSC BURIED . . . . . . . . 4.57 61 33.7 181 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.18 459 45.3 1014 CRMSALL SECONDARY STRUCTURE . . 2.37 144 42.7 337 CRMSALL SURFACE . . . . . . . . 6.76 334 43.7 765 CRMSALL BURIED . . . . . . . . 4.25 125 50.2 249 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.262 1.000 0.500 60 88.2 68 ERRCA SECONDARY STRUCTURE . . 1.949 1.000 0.500 17 85.0 20 ERRCA SURFACE . . . . . . . . 4.729 1.000 0.500 44 86.3 51 ERRCA BURIED . . . . . . . . 2.977 1.000 0.500 16 94.1 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.267 1.000 0.500 296 88.1 336 ERRMC SECONDARY STRUCTURE . . 1.969 1.000 0.500 85 85.0 100 ERRMC SURFACE . . . . . . . . 4.688 1.000 0.500 217 86.1 252 ERRMC BURIED . . . . . . . . 3.110 1.000 0.500 79 94.0 84 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.394 1.000 0.500 219 29.5 742 ERRSC RELIABLE SIDE CHAINS . 5.250 1.000 0.500 183 26.1 700 ERRSC SECONDARY STRUCTURE . . 2.394 1.000 0.500 76 29.6 257 ERRSC SURFACE . . . . . . . . 6.140 1.000 0.500 158 28.2 561 ERRSC BURIED . . . . . . . . 3.460 1.000 0.500 61 33.7 181 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.758 1.000 0.500 459 45.3 1014 ERRALL SECONDARY STRUCTURE . . 2.172 1.000 0.500 144 42.7 337 ERRALL SURFACE . . . . . . . . 5.328 1.000 0.500 334 43.7 765 ERRALL BURIED . . . . . . . . 3.236 1.000 0.500 125 50.2 249 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 14 30 41 56 60 68 DISTCA CA (P) 7.35 20.59 44.12 60.29 82.35 68 DISTCA CA (RMS) 0.82 1.51 2.06 2.69 4.24 DISTCA ALL (N) 14 108 215 302 414 459 1014 DISTALL ALL (P) 1.38 10.65 21.20 29.78 40.83 1014 DISTALL ALL (RMS) 0.78 1.55 2.06 2.72 4.35 DISTALL END of the results output