####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 65 ( 260), selected 65 , name T0539AL396_1-D1 # Molecule2: number of CA atoms 68 ( 1014), selected 65 , name T0539-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0539AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 49 - 81 4.41 6.86 LCS_AVERAGE: 43.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 52 - 74 2.00 6.89 LCS_AVERAGE: 20.02 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 51 - 62 0.97 6.98 LONGEST_CONTINUOUS_SEGMENT: 12 52 - 63 0.95 6.88 LONGEST_CONTINUOUS_SEGMENT: 12 55 - 66 0.86 7.10 LONGEST_CONTINUOUS_SEGMENT: 12 57 - 68 0.93 8.20 LCS_AVERAGE: 11.92 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 65 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 14 A 14 3 4 27 0 3 9 20 30 35 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT L 15 L 15 3 4 27 3 3 9 20 27 35 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 16 P 16 3 4 27 3 8 15 22 31 35 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT E 17 E 17 3 7 27 3 3 3 3 6 14 17 21 31 33 40 49 50 52 54 55 57 59 59 60 LCS_GDT I 18 I 18 5 7 27 3 4 5 5 5 6 7 16 20 30 36 39 43 47 50 53 57 59 59 60 LCS_GDT L 19 L 19 5 7 27 3 4 5 6 8 11 13 15 20 30 33 37 43 47 50 53 57 59 59 60 LCS_GDT V 20 V 20 5 7 27 3 4 5 5 6 10 12 14 19 30 33 39 43 47 50 53 57 59 59 60 LCS_GDT T 21 T 21 5 7 27 3 4 5 6 8 11 14 18 26 32 36 39 43 49 52 54 57 59 59 60 LCS_GDT E 22 E 22 5 7 27 3 4 5 5 6 6 7 12 13 30 33 39 43 47 52 53 57 59 59 60 LCS_GDT D 23 D 23 4 7 27 3 3 5 7 10 13 18 27 30 38 47 49 51 53 54 55 57 59 59 60 LCS_GDT H 24 H 24 3 3 27 3 3 5 21 28 35 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT G 28 G 28 4 6 27 3 4 5 6 13 16 22 24 38 42 46 51 52 53 54 55 56 56 59 60 LCS_GDT Q 29 Q 29 4 6 27 3 4 5 10 13 17 29 33 39 47 49 51 52 53 54 55 57 59 59 60 LCS_GDT E 30 E 30 4 12 27 3 4 5 10 18 26 38 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT M 31 M 31 11 12 27 4 7 14 23 29 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 32 C 32 11 12 27 4 13 23 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 33 C 33 11 12 27 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 34 P 34 11 12 27 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT I 35 I 35 11 12 27 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 36 C 36 11 12 27 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 37 C 37 11 12 27 10 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT S 38 S 38 11 12 27 10 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT E 39 E 39 11 12 27 10 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT Y 40 Y 40 11 12 27 3 12 22 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT V 41 V 41 11 12 27 3 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT K 42 K 42 3 12 27 3 3 5 6 11 14 28 38 42 47 50 51 52 53 54 55 57 59 59 60 LCS_GDT G 43 G 43 4 6 27 3 4 5 7 10 16 26 38 42 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT E 44 E 44 4 6 25 3 4 6 8 11 17 28 38 42 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT V 45 V 45 4 4 22 3 4 4 4 7 9 11 15 26 32 38 48 51 52 54 54 55 56 58 60 LCS_GDT A 46 A 46 4 4 22 0 4 4 4 5 7 11 13 17 19 24 31 40 47 53 54 55 55 57 60 LCS_GDT T 47 T 47 3 4 22 0 3 4 6 6 7 9 12 16 19 21 28 29 36 42 44 51 55 55 56 LCS_GDT E 48 E 48 3 4 22 1 3 4 6 6 6 9 10 11 13 16 19 19 20 21 22 22 29 37 38 LCS_GDT L 49 L 49 3 3 33 0 3 4 6 6 6 8 10 13 14 17 19 19 20 21 22 25 29 37 38 LCS_GDT P 50 P 50 11 17 33 3 5 8 17 28 35 38 41 46 47 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 51 C 51 12 17 33 3 8 15 25 31 35 38 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT H 52 H 52 12 23 33 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT H 53 H 53 12 23 33 5 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT Y 54 Y 54 12 23 33 5 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT F 55 F 55 12 23 33 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT H 56 H 56 12 23 33 9 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT K 57 K 57 12 23 33 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 58 P 58 12 23 33 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 59 C 59 12 23 33 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT V 60 V 60 12 23 33 9 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT S 61 S 61 12 23 33 5 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT I 62 I 62 12 23 33 6 15 23 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT W 63 W 63 12 23 33 6 15 23 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT L 64 L 64 12 23 33 6 15 22 28 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT Q 65 Q 65 12 23 33 6 15 22 27 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT K 66 K 66 12 23 33 5 15 20 25 32 36 38 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT S 67 S 67 12 23 33 3 3 8 12 17 23 31 37 42 46 49 50 52 53 54 55 57 59 59 60 LCS_GDT G 68 G 68 12 23 33 5 12 16 21 26 33 37 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT T 69 T 69 9 23 33 7 11 24 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 70 C 70 9 23 33 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 71 P 71 9 23 33 7 17 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT V 72 V 72 9 23 33 7 13 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 73 C 73 9 23 33 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT R 74 R 74 9 23 33 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT C 75 C 75 9 11 33 7 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT M 76 M 76 9 11 33 8 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT F 77 F 77 9 11 33 3 11 16 28 33 35 38 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 78 P 78 4 11 33 3 10 22 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 79 P 79 4 6 33 3 3 12 15 25 33 37 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT P 80 P 80 3 5 33 9 17 23 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 LCS_GDT L 81 L 81 3 4 33 3 3 3 5 10 25 38 40 46 48 50 51 52 53 54 55 57 59 59 60 LCS_AVERAGE LCS_A: 25.21 ( 11.92 20.02 43.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 18 25 32 34 36 39 41 46 48 50 51 52 53 54 55 57 59 59 60 GDT PERCENT_AT 14.71 26.47 36.76 47.06 50.00 52.94 57.35 60.29 67.65 70.59 73.53 75.00 76.47 77.94 79.41 80.88 83.82 86.76 86.76 88.24 GDT RMS_LOCAL 0.38 0.67 0.94 1.25 1.42 1.61 1.93 2.06 2.48 2.76 2.91 3.02 3.17 3.28 3.50 3.63 4.25 4.48 4.43 4.59 GDT RMS_ALL_AT 6.93 7.17 7.02 6.84 6.80 6.79 6.55 6.67 6.58 6.52 6.55 6.53 6.53 6.53 6.48 6.47 6.53 6.54 6.49 6.51 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 14 A 14 3.981 1 0.204 0.204 4.868 44.167 35.333 LGA L 15 L 15 3.998 4 0.542 0.542 4.344 41.786 20.893 LGA P 16 P 16 3.676 3 0.594 0.594 4.607 37.381 21.361 LGA E 17 E 17 8.833 5 0.614 0.614 11.171 4.048 1.799 LGA I 18 I 18 11.706 4 0.588 0.588 11.966 0.000 0.000 LGA L 19 L 19 11.686 4 0.042 0.042 11.686 0.000 0.000 LGA V 20 V 20 11.590 3 0.016 0.016 11.759 0.000 0.000 LGA T 21 T 21 10.811 3 0.127 0.127 11.754 0.000 0.000 LGA E 22 E 22 11.691 5 0.652 0.652 11.691 0.000 0.000 LGA D 23 D 23 9.272 4 0.163 0.163 9.711 2.976 1.488 LGA H 24 H 24 4.830 6 0.182 0.182 6.140 26.548 10.619 LGA G 28 G 28 8.538 0 0.542 0.542 10.299 3.095 3.095 LGA Q 29 Q 29 6.944 5 0.046 0.046 6.944 16.310 7.249 LGA E 30 E 30 5.220 5 0.603 0.603 6.056 39.405 17.513 LGA M 31 M 31 3.376 4 0.678 0.678 3.376 53.571 26.786 LGA C 32 C 32 1.737 2 0.033 0.033 2.260 75.119 50.079 LGA C 33 C 33 0.689 2 0.035 0.035 1.014 88.214 58.810 LGA P 34 P 34 0.441 3 0.071 0.071 0.796 92.857 53.061 LGA I 35 I 35 0.714 4 0.064 0.064 1.019 88.214 44.107 LGA C 36 C 36 0.914 2 0.028 0.028 0.914 90.476 60.317 LGA C 37 C 37 0.837 2 0.045 0.045 0.837 90.476 60.317 LGA S 38 S 38 0.700 2 0.026 0.026 0.757 90.476 60.317 LGA E 39 E 39 0.443 5 0.180 0.180 0.526 97.619 43.386 LGA Y 40 Y 40 1.658 8 0.619 0.619 3.865 67.619 22.540 LGA V 41 V 41 1.549 3 0.604 0.604 2.572 66.905 38.231 LGA K 42 K 42 6.527 5 0.161 0.161 6.527 19.762 8.783 LGA G 43 G 43 6.417 0 0.655 0.655 8.000 12.738 12.738 LGA E 44 E 44 6.323 5 0.049 0.049 10.111 9.286 4.127 LGA V 45 V 45 11.542 3 0.611 0.611 11.783 0.357 0.204 LGA A 46 A 46 12.870 1 0.674 0.674 14.776 0.000 0.000 LGA T 47 T 47 14.830 3 0.623 0.623 17.615 0.000 0.000 LGA E 48 E 48 21.660 5 0.578 0.578 23.046 0.000 0.000 LGA L 49 L 49 21.700 4 0.580 0.580 24.082 0.000 0.000 LGA P 50 P 50 3.803 3 0.273 0.273 4.028 41.786 23.878 LGA C 51 C 51 3.692 2 0.137 0.137 3.692 46.667 31.111 LGA H 52 H 52 2.063 6 0.099 0.099 2.965 62.857 25.143 LGA H 53 H 53 1.932 6 0.020 0.020 1.932 72.857 29.143 LGA Y 54 Y 54 1.728 8 0.018 0.018 1.817 79.405 26.468 LGA F 55 F 55 0.412 7 0.172 0.172 0.993 97.619 35.498 LGA H 56 H 56 0.376 6 0.165 0.165 0.487 100.000 40.000 LGA K 57 K 57 0.934 5 0.095 0.095 1.114 88.214 39.206 LGA P 58 P 58 0.932 3 0.031 0.031 0.959 90.476 51.701 LGA C 59 C 59 0.687 2 0.035 0.035 0.687 95.238 63.492 LGA V 60 V 60 0.602 3 0.054 0.054 0.910 92.857 53.061 LGA S 61 S 61 0.884 2 0.032 0.032 1.506 83.810 55.873 LGA I 62 I 62 1.701 4 0.009 0.009 2.255 72.976 36.488 LGA W 63 W 63 1.492 10 0.021 0.021 2.472 73.095 20.884 LGA L 64 L 64 2.748 4 0.105 0.105 3.751 53.810 26.905 LGA Q 65 Q 65 3.678 5 0.200 0.200 3.813 45.000 20.000 LGA K 66 K 66 4.215 5 0.006 0.006 6.111 29.405 13.069 LGA S 67 S 67 6.779 2 0.129 0.129 8.074 14.405 9.603 LGA G 68 G 68 4.864 0 0.282 0.282 7.036 20.238 20.238 LGA T 69 T 69 2.582 3 0.025 0.025 3.254 63.214 36.122 LGA C 70 C 70 1.032 2 0.042 0.042 1.507 83.810 55.873 LGA P 71 P 71 1.207 3 0.209 0.209 2.027 79.524 45.442 LGA V 72 V 72 1.282 3 0.209 0.209 1.861 79.286 45.306 LGA C 73 C 73 1.144 2 0.028 0.028 1.144 81.429 54.286 LGA R 74 R 74 1.242 7 0.125 0.125 1.815 77.143 28.052 LGA C 75 C 75 1.909 2 0.123 0.123 2.203 70.833 47.222 LGA M 76 M 76 2.018 4 0.027 0.027 2.366 66.786 33.393 LGA F 77 F 77 3.453 7 0.641 0.641 6.351 40.357 14.675 LGA P 78 P 78 1.593 3 0.446 0.446 2.924 64.881 37.075 LGA P 79 P 79 5.505 3 0.488 0.488 5.505 36.310 20.748 LGA P 80 P 80 1.133 3 0.230 0.230 3.572 63.690 36.395 LGA L 81 L 81 4.478 5 0.019 0.019 5.311 37.976 16.878 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 65 260 260 100.00 502 260 51.79 68 SUMMARY(RMSD_GDC): 6.359 6.490 6.490 48.020 25.829 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 65 68 4.0 41 2.06 53.676 47.820 1.896 LGA_LOCAL RMSD: 2.062 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.670 Number of assigned atoms: 65 Std_ASGN_ATOMS RMSD: 6.359 Standard rmsd on all 65 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.475542 * X + 0.879272 * Y + 0.027210 * Z + 7.215467 Y_new = 0.115867 * X + -0.031943 * Y + -0.992751 * Z + -3.422487 Z_new = -0.872029 * X + 0.475247 * Y + -0.117069 * Z + 2.136062 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.238996 1.059333 1.812321 [DEG: 13.6935 60.6953 103.8383 ] ZXZ: 0.027402 1.688134 -1.071808 [DEG: 1.5700 96.7230 -61.4100 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0539AL396_1-D1 REMARK 2: T0539-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0539AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 65 68 4.0 41 2.06 47.820 6.36 REMARK ---------------------------------------------------------- MOLECULE T0539AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1v87_A ATOM 45 N ALA 14 7.710 -4.813 6.251 1.00 0.00 N ATOM 46 CA ALA 14 6.413 -4.549 6.862 1.00 0.00 C ATOM 47 C ALA 14 5.332 -4.375 5.801 1.00 0.00 C ATOM 48 O ALA 14 4.229 -4.907 5.931 1.00 0.00 O ATOM 49 N LEU 15 5.656 -3.628 4.750 1.00 0.00 N ATOM 50 CA LEU 15 4.712 -3.385 3.666 1.00 0.00 C ATOM 51 C LEU 15 4.175 -4.697 3.102 1.00 0.00 C ATOM 52 O LEU 15 2.969 -4.946 3.123 1.00 0.00 O ATOM 53 N PRO 16 5.077 -5.532 2.599 1.00 0.00 N ATOM 54 CA PRO 16 4.694 -6.818 2.030 1.00 0.00 C ATOM 55 C PRO 16 3.948 -7.667 3.055 1.00 0.00 C ATOM 56 O PRO 16 2.932 -8.288 2.743 1.00 0.00 O ATOM 57 N GLU 17 4.459 -7.688 4.282 1.00 0.00 N ATOM 58 CA GLU 17 3.841 -8.458 5.355 1.00 0.00 C ATOM 59 C GLU 17 2.338 -8.212 5.406 1.00 0.00 C ATOM 60 O GLU 17 1.561 -9.114 5.721 1.00 0.00 O ATOM 61 N ILE 18 1.932 -6.986 5.093 1.00 0.00 N ATOM 62 CA ILE 18 0.520 -6.622 5.103 1.00 0.00 C ATOM 63 C ILE 18 -0.058 -6.639 3.692 1.00 0.00 C ATOM 64 O ILE 18 -1.254 -6.861 3.500 1.00 0.00 O ATOM 65 N LEU 19 0.801 -6.402 2.704 1.00 0.00 N ATOM 66 CA LEU 19 0.378 -6.389 1.310 1.00 0.00 C ATOM 67 C LEU 19 1.001 -7.545 0.535 1.00 0.00 C ATOM 68 O LEU 19 2.219 -7.723 0.542 1.00 0.00 O ATOM 69 N VAL 20 0.158 -8.329 -0.131 1.00 0.00 N ATOM 70 CA VAL 20 0.628 -9.468 -0.910 1.00 0.00 C ATOM 71 C VAL 20 0.737 -9.107 -2.388 1.00 0.00 C ATOM 72 O VAL 20 -0.261 -8.790 -3.035 1.00 0.00 O ATOM 73 N THR 21 1.956 -9.160 -2.915 1.00 0.00 N ATOM 74 CA THR 21 2.195 -8.838 -4.317 1.00 0.00 C ATOM 75 C THR 21 1.337 -9.708 -5.230 1.00 0.00 C ATOM 76 O THR 21 1.210 -10.915 -5.017 1.00 0.00 O ATOM 77 N GLU 22 0.747 -9.087 -6.246 1.00 0.00 N ATOM 78 CA GLU 22 -0.100 -9.804 -7.192 1.00 0.00 C ATOM 79 C GLU 22 0.642 -10.069 -8.498 1.00 0.00 C ATOM 80 O GLU 22 1.384 -9.217 -8.987 1.00 0.00 O ATOM 81 N ASP 23 0.436 -11.255 -9.059 1.00 0.00 N ATOM 82 CA ASP 23 1.083 -11.633 -10.310 1.00 0.00 C ATOM 83 C ASP 23 1.033 -10.488 -11.316 1.00 0.00 C ATOM 84 O ASP 23 1.967 -10.290 -12.094 1.00 0.00 O ATOM 85 N HIS 24 -0.062 -9.734 -11.295 1.00 0.00 N ATOM 86 CA HIS 24 -0.232 -8.607 -12.204 1.00 0.00 C ATOM 87 C HIS 24 -1.189 -7.572 -11.621 1.00 0.00 C ATOM 88 O HIS 24 -2.278 -7.909 -11.158 1.00 0.00 O ATOM 89 N GLY 28 -0.773 -6.310 -11.648 1.00 0.00 N ATOM 90 CA GLY 28 -1.595 -5.225 -11.126 1.00 0.00 C ATOM 91 C GLY 28 -3.052 -5.390 -11.542 1.00 0.00 C ATOM 92 O GLY 28 -3.373 -5.553 -12.719 1.00 0.00 O ATOM 93 N GLN 29 -3.959 -5.347 -10.554 1.00 0.00 N ATOM 94 CA GLN 29 -5.398 -5.491 -10.793 1.00 0.00 C ATOM 95 C GLN 29 -5.988 -4.286 -11.519 1.00 0.00 C ATOM 96 O GLN 29 -5.257 -3.456 -12.057 1.00 0.00 O ATOM 97 N GLU 30 -7.315 -4.198 -11.528 1.00 0.00 N ATOM 98 CA GLU 30 -8.001 -3.094 -12.189 1.00 0.00 C ATOM 99 C GLU 30 -8.399 -2.019 -11.181 1.00 0.00 C ATOM 100 O GLU 30 -9.430 -1.365 -11.330 1.00 0.00 O ATOM 101 N MET 31 -7.573 -1.846 -10.153 1.00 0.00 N ATOM 102 CA MET 31 -7.840 -0.852 -9.120 1.00 0.00 C ATOM 103 C MET 31 -7.117 0.457 -9.424 1.00 0.00 C ATOM 104 O MET 31 -6.256 0.514 -10.303 1.00 0.00 O ATOM 105 N CYS 32 -7.474 1.507 -8.694 1.00 0.00 N ATOM 106 CA CYS 32 -6.862 2.817 -8.886 1.00 0.00 C ATOM 107 C CYS 32 -6.253 3.328 -7.582 1.00 0.00 C ATOM 108 O CYS 32 -6.942 3.446 -6.568 1.00 0.00 O ATOM 109 N CYS 33 -4.960 3.627 -7.618 1.00 0.00 N ATOM 110 CA CYS 33 -4.258 4.124 -6.440 1.00 0.00 C ATOM 111 C CYS 33 -4.666 5.561 -6.129 1.00 0.00 C ATOM 112 O CYS 33 -4.438 6.468 -6.928 1.00 0.00 O ATOM 113 N PRO 34 -5.270 5.758 -4.962 1.00 0.00 N ATOM 114 CA PRO 34 -5.708 7.084 -4.544 1.00 0.00 C ATOM 115 C PRO 34 -4.544 7.900 -3.995 1.00 0.00 C ATOM 116 O PRO 34 -4.559 9.131 -4.040 1.00 0.00 O ATOM 117 N ILE 35 -3.535 7.208 -3.477 1.00 0.00 N ATOM 118 CA ILE 35 -2.361 7.869 -2.921 1.00 0.00 C ATOM 119 C ILE 35 -1.701 8.776 -3.953 1.00 0.00 C ATOM 120 O ILE 35 -1.307 9.902 -3.646 1.00 0.00 O ATOM 121 N CYS 36 -1.584 8.280 -5.181 1.00 0.00 N ATOM 122 CA CYS 36 -0.972 9.045 -6.261 1.00 0.00 C ATOM 123 C CYS 36 -1.997 9.373 -7.342 1.00 0.00 C ATOM 124 O CYS 36 -1.686 10.048 -8.322 1.00 0.00 O ATOM 125 N CYS 37 -3.221 8.890 -7.156 1.00 0.00 N ATOM 126 CA CYS 37 -4.292 9.132 -8.117 1.00 0.00 C ATOM 127 C CYS 37 -3.872 8.705 -9.519 1.00 0.00 C ATOM 128 O CYS 37 -4.155 9.395 -10.498 1.00 0.00 O ATOM 129 N SER 38 -3.195 7.565 -9.608 1.00 0.00 N ATOM 130 CA SER 38 -2.736 7.048 -10.892 1.00 0.00 C ATOM 131 C SER 38 -3.134 5.586 -11.064 1.00 0.00 C ATOM 132 O SER 38 -3.307 4.857 -10.086 1.00 0.00 O ATOM 133 N GLU 39 -3.278 5.161 -12.315 1.00 0.00 N ATOM 134 CA GLU 39 -3.655 3.785 -12.618 1.00 0.00 C ATOM 135 C GLU 39 -2.517 2.824 -12.290 1.00 0.00 C ATOM 136 O GLU 39 -1.395 2.986 -12.771 1.00 0.00 O ATOM 137 N TYR 40 -2.813 1.822 -11.468 1.00 0.00 N ATOM 138 CA TYR 40 -1.815 0.833 -11.076 1.00 0.00 C ATOM 139 C TYR 40 -0.987 0.390 -12.277 1.00 0.00 C ATOM 140 O TYR 40 0.213 0.144 -12.160 1.00 0.00 O ATOM 141 N VAL 41 -1.635 0.293 -13.433 1.00 0.00 N ATOM 142 CA VAL 41 -0.958 -0.116 -14.657 1.00 0.00 C ATOM 143 C VAL 41 0.312 0.699 -14.880 1.00 0.00 C ATOM 144 O VAL 41 1.338 0.165 -15.302 1.00 0.00 O ATOM 145 N LYS 42 0.235 1.995 -14.596 1.00 0.00 N ATOM 146 CA LYS 42 1.378 2.884 -14.766 1.00 0.00 C ATOM 147 C LYS 42 2.257 2.893 -13.520 1.00 0.00 C ATOM 148 O LYS 42 1.860 2.400 -12.465 1.00 0.00 O ATOM 149 N GLY 43 3.454 3.456 -13.651 1.00 0.00 N ATOM 150 CA GLY 43 4.389 3.532 -12.535 1.00 0.00 C ATOM 151 C GLY 43 3.798 4.330 -11.377 1.00 0.00 C ATOM 152 O GLY 43 2.747 4.957 -11.515 1.00 0.00 O ATOM 153 N GLU 44 4.480 4.302 -10.237 1.00 0.00 N ATOM 154 CA GLU 44 4.020 5.019 -9.053 1.00 0.00 C ATOM 155 C GLU 44 4.379 6.500 -9.142 1.00 0.00 C ATOM 156 O GLU 44 5.385 6.871 -9.745 1.00 0.00 O ATOM 157 N VAL 45 3.546 7.341 -8.536 1.00 0.00 N ATOM 158 CA VAL 45 3.791 8.771 -8.558 1.00 0.00 C ATOM 159 C VAL 45 4.980 9.169 -7.705 1.00 0.00 C ATOM 160 O VAL 45 5.740 10.067 -8.069 1.00 0.00 O ATOM 161 N ALA 46 5.141 8.501 -6.570 1.00 0.00 N ATOM 162 CA ALA 46 6.244 8.791 -5.662 1.00 0.00 C ATOM 163 C ALA 46 7.565 8.279 -6.226 1.00 0.00 C ATOM 164 O ALA 46 8.641 8.656 -5.760 1.00 0.00 O ATOM 165 N THR 47 7.476 7.417 -7.233 1.00 0.00 N ATOM 166 CA THR 47 8.663 6.849 -7.861 1.00 0.00 C ATOM 167 C THR 47 9.788 7.878 -7.927 1.00 0.00 C ATOM 168 O THR 47 10.962 7.540 -7.772 1.00 0.00 O ATOM 169 N GLU 48 9.420 9.133 -8.157 1.00 0.00 N ATOM 170 CA GLU 48 10.396 10.212 -8.243 1.00 0.00 C ATOM 171 C GLU 48 10.962 10.544 -6.865 1.00 0.00 C ATOM 172 O GLU 48 12.177 10.573 -6.672 1.00 0.00 O ATOM 173 N LEU 49 10.071 10.795 -5.910 1.00 0.00 N ATOM 174 CA LEU 49 10.481 11.125 -4.551 1.00 0.00 C ATOM 175 C LEU 49 11.233 9.961 -3.912 1.00 0.00 C ATOM 176 O LEU 49 12.354 10.122 -3.429 1.00 0.00 O ATOM 177 N PRO 50 -6.280 -7.405 4.508 1.00 0.00 N ATOM 178 CA PRO 50 -7.425 -7.037 5.335 1.00 0.00 C ATOM 179 C PRO 50 -8.619 -6.649 4.469 1.00 0.00 C ATOM 180 O PRO 50 -9.586 -7.403 4.353 1.00 0.00 O ATOM 181 N CYS 51 -8.545 -5.469 3.862 1.00 0.00 N ATOM 182 CA CYS 51 -9.619 -4.982 3.006 1.00 0.00 C ATOM 183 C CYS 51 -9.405 -5.420 1.560 1.00 0.00 C ATOM 184 O CYS 51 -10.268 -5.221 0.706 1.00 0.00 O ATOM 185 N HIS 52 -8.249 -6.019 1.295 1.00 0.00 N ATOM 186 CA HIS 52 -7.918 -6.483 -0.047 1.00 0.00 C ATOM 187 C HIS 52 -7.937 -5.326 -1.042 1.00 0.00 C ATOM 188 O HIS 52 -8.510 -5.434 -2.126 1.00 0.00 O ATOM 189 N HIS 53 -7.305 -4.219 -0.664 1.00 0.00 N ATOM 190 CA HIS 53 -7.249 -3.040 -1.522 1.00 0.00 C ATOM 191 C HIS 53 -5.876 -2.909 -2.175 1.00 0.00 C ATOM 192 O HIS 53 -4.857 -2.830 -1.489 1.00 0.00 O ATOM 193 N TYR 54 -5.858 -2.889 -3.504 1.00 0.00 N ATOM 194 CA TYR 54 -4.611 -2.767 -4.249 1.00 0.00 C ATOM 195 C TYR 54 -3.974 -1.399 -4.033 1.00 0.00 C ATOM 196 O TYR 54 -4.659 -0.376 -4.037 1.00 0.00 O ATOM 197 N PHE 55 -2.658 -1.387 -3.843 1.00 0.00 N ATOM 198 CA PHE 55 -1.929 -0.143 -3.623 1.00 0.00 C ATOM 199 C PHE 55 -0.451 -0.312 -3.964 1.00 0.00 C ATOM 200 O PHE 55 0.181 -1.292 -3.568 1.00 0.00 O ATOM 201 N HIS 56 0.093 0.649 -4.703 1.00 0.00 N ATOM 202 CA HIS 56 1.497 0.608 -5.098 1.00 0.00 C ATOM 203 C HIS 56 2.393 0.351 -3.891 1.00 0.00 C ATOM 204 O HIS 56 2.678 1.261 -3.111 1.00 0.00 O ATOM 205 N LYS 57 2.837 -0.892 -3.743 1.00 0.00 N ATOM 206 CA LYS 57 3.701 -1.268 -2.630 1.00 0.00 C ATOM 207 C LYS 57 4.670 -0.141 -2.287 1.00 0.00 C ATOM 208 O LYS 57 5.031 0.049 -1.125 1.00 0.00 O ATOM 209 N PRO 58 5.085 0.606 -3.305 1.00 0.00 N ATOM 210 CA PRO 58 6.009 1.716 -3.110 1.00 0.00 C ATOM 211 C PRO 58 5.312 2.895 -2.439 1.00 0.00 C ATOM 212 O PRO 58 5.797 3.433 -1.443 1.00 0.00 O ATOM 213 N CYS 59 4.169 3.291 -2.989 1.00 0.00 N ATOM 214 CA CYS 59 3.402 4.404 -2.442 1.00 0.00 C ATOM 215 C CYS 59 3.170 4.222 -0.946 1.00 0.00 C ATOM 216 O CYS 59 3.271 5.173 -0.170 1.00 0.00 O ATOM 217 N VAL 60 2.858 2.994 -0.547 1.00 0.00 N ATOM 218 CA VAL 60 2.611 2.685 0.858 1.00 0.00 C ATOM 219 C VAL 60 3.850 2.967 1.704 1.00 0.00 C ATOM 220 O VAL 60 3.755 3.525 2.797 1.00 0.00 O ATOM 221 N SER 61 5.011 2.578 1.189 1.00 0.00 N ATOM 222 CA SER 61 6.270 2.790 1.894 1.00 0.00 C ATOM 223 C SER 61 6.560 4.279 2.055 1.00 0.00 C ATOM 224 O SER 61 7.048 4.718 3.096 1.00 0.00 O ATOM 225 N ILE 62 6.253 5.052 1.018 1.00 0.00 N ATOM 226 CA ILE 62 6.477 6.492 1.046 1.00 0.00 C ATOM 227 C ILE 62 5.653 7.155 2.145 1.00 0.00 C ATOM 228 O ILE 62 6.149 8.010 2.876 1.00 0.00 O ATOM 229 N TRP 63 4.390 6.754 2.252 1.00 0.00 N ATOM 230 CA TRP 63 3.496 7.309 3.262 1.00 0.00 C ATOM 231 C TRP 63 3.917 6.871 4.661 1.00 0.00 C ATOM 232 O TRP 63 3.879 7.658 5.607 1.00 0.00 O ATOM 233 N LEU 64 4.319 5.611 4.786 1.00 0.00 N ATOM 234 CA LEU 64 4.745 5.067 6.070 1.00 0.00 C ATOM 235 C LEU 64 6.034 5.732 6.543 1.00 0.00 C ATOM 236 O LEU 64 6.157 6.115 7.707 1.00 0.00 O ATOM 237 N GLN 65 6.991 5.867 5.631 1.00 0.00 N ATOM 238 CA GLN 65 8.272 6.485 5.953 1.00 0.00 C ATOM 239 C GLN 65 8.105 7.978 6.215 1.00 0.00 C ATOM 240 O GLN 65 8.735 8.535 7.112 1.00 0.00 O ATOM 241 N LYS 66 7.251 8.620 5.424 1.00 0.00 N ATOM 242 CA LYS 66 7.001 10.049 5.569 1.00 0.00 C ATOM 243 C LYS 66 7.003 10.455 7.039 1.00 0.00 C ATOM 244 O LYS 66 7.557 11.491 7.408 1.00 0.00 O ATOM 245 N SER 67 6.379 9.631 7.877 1.00 0.00 N ATOM 246 CA SER 67 6.320 9.922 9.297 1.00 0.00 C ATOM 247 C SER 67 5.805 8.748 10.108 1.00 0.00 C ATOM 248 O SER 67 6.362 8.416 11.153 1.00 0.00 O ATOM 249 N GLY 68 4.738 8.122 9.625 1.00 0.00 N ATOM 250 CA GLY 68 4.146 6.980 10.313 1.00 0.00 C ATOM 251 C GLY 68 5.064 5.765 10.241 1.00 0.00 C ATOM 252 O GLY 68 4.868 4.871 9.416 1.00 0.00 O ATOM 253 N THR 69 -1.433 1.607 7.720 1.00 0.00 N ATOM 254 CA THR 69 -2.863 1.876 7.630 1.00 0.00 C ATOM 255 C THR 69 -3.264 2.217 6.199 1.00 0.00 C ATOM 256 O THR 69 -2.555 2.939 5.499 1.00 0.00 O ATOM 257 N CYS 70 -4.406 1.690 5.770 1.00 0.00 N ATOM 258 CA CYS 70 -4.904 1.936 4.421 1.00 0.00 C ATOM 259 C CYS 70 -5.537 3.320 4.319 1.00 0.00 C ATOM 260 O CYS 70 -6.502 3.641 5.013 1.00 0.00 O ATOM 261 N PRO 71 -4.984 4.161 3.434 1.00 0.00 N ATOM 262 CA PRO 71 -5.480 5.524 3.218 1.00 0.00 C ATOM 263 C PRO 71 -6.842 5.544 2.534 1.00 0.00 C ATOM 264 O PRO 71 -7.340 6.603 2.154 1.00 0.00 O ATOM 265 N VAL 72 -7.440 4.366 2.382 1.00 0.00 N ATOM 266 CA VAL 72 -8.744 4.249 1.740 1.00 0.00 C ATOM 267 C VAL 72 -9.830 3.949 2.768 1.00 0.00 C ATOM 268 O VAL 72 -10.685 4.790 3.049 1.00 0.00 O ATOM 269 N CYS 73 -9.790 2.745 3.327 1.00 0.00 N ATOM 270 CA CYS 73 -10.770 2.331 4.325 1.00 0.00 C ATOM 271 C CYS 73 -10.291 2.673 5.733 1.00 0.00 C ATOM 272 O CYS 73 -11.027 2.516 6.707 1.00 0.00 O ATOM 273 N ARG 74 -9.051 3.142 5.832 1.00 0.00 N ATOM 274 CA ARG 74 -8.472 3.507 7.119 1.00 0.00 C ATOM 275 C ARG 74 -8.378 2.294 8.039 1.00 0.00 C ATOM 276 O ARG 74 -8.757 2.356 9.208 1.00 0.00 O ATOM 277 N CYS 75 -7.866 1.190 7.502 1.00 0.00 N ATOM 278 CA CYS 75 -7.721 -0.038 8.274 1.00 0.00 C ATOM 279 C CYS 75 -6.282 -0.225 8.742 1.00 0.00 C ATOM 280 O CYS 75 -5.360 -0.308 7.929 1.00 0.00 O ATOM 281 N MET 76 -6.097 -0.292 10.056 1.00 0.00 N ATOM 282 CA MET 76 -4.769 -0.472 10.631 1.00 0.00 C ATOM 283 C MET 76 -4.374 -1.945 10.653 1.00 0.00 C ATOM 284 O MET 76 -5.215 -2.820 10.856 1.00 0.00 O ATOM 285 N PHE 77 -3.090 -2.211 10.443 1.00 0.00 N ATOM 286 CA PHE 77 -2.583 -3.577 10.438 1.00 0.00 C ATOM 287 C PHE 77 -1.626 -3.808 11.604 1.00 0.00 C ATOM 288 O PHE 77 -1.471 -4.930 12.082 1.00 0.00 O ATOM 289 N PRO 78 -0.985 -2.734 12.056 1.00 0.00 N ATOM 290 CA PRO 78 -0.051 -2.840 13.161 1.00 0.00 C ATOM 291 C PRO 78 -0.680 -2.466 14.489 1.00 0.00 C ATOM 292 O PRO 78 -1.077 -3.337 15.261 1.00 0.00 O ATOM 293 N PRO 79 -0.770 -1.166 14.755 1.00 0.00 N ATOM 294 CA PRO 79 -1.352 -0.680 16.000 1.00 0.00 C ATOM 295 C PRO 79 -2.461 -1.611 16.481 1.00 0.00 C ATOM 296 O PRO 79 -2.272 -2.389 17.417 1.00 0.00 O ATOM 297 N PRO 80 -3.620 -1.526 15.835 1.00 0.00 N ATOM 298 CA PRO 80 -4.760 -2.360 16.195 1.00 0.00 C ATOM 299 C PRO 80 -5.574 -2.731 14.959 1.00 0.00 C ATOM 300 O PRO 80 -6.143 -1.864 14.295 1.00 0.00 O ATOM 301 N LEU 81 -5.628 -4.024 14.657 1.00 0.00 N ATOM 302 CA LEU 81 -6.372 -4.510 13.502 1.00 0.00 C ATOM 303 C LEU 81 -7.874 -4.479 13.764 1.00 0.00 C ATOM 304 O LEU 81 -8.436 -5.421 14.321 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 260 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.87 57.1 126 94.0 134 ARMSMC SECONDARY STRUCTURE . . 70.73 62.5 40 100.0 40 ARMSMC SURFACE . . . . . . . . 71.67 54.3 94 94.0 100 ARMSMC BURIED . . . . . . . . 72.44 65.6 32 94.1 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 61 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 55 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 19 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 30 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 14 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 11 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 4 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 1 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.36 (Number of atoms: 65) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.36 65 95.6 68 CRMSCA CRN = ALL/NP . . . . . 0.0978 CRMSCA SECONDARY STRUCTURE . . 9.05 20 100.0 20 CRMSCA SURFACE . . . . . . . . 5.86 49 96.1 51 CRMSCA BURIED . . . . . . . . 7.69 16 94.1 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.49 260 77.4 336 CRMSMC SECONDARY STRUCTURE . . 9.19 80 80.0 100 CRMSMC SURFACE . . . . . . . . 5.87 196 77.8 252 CRMSMC BURIED . . . . . . . . 8.10 64 76.2 84 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 742 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 700 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 257 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 561 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 181 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.49 260 25.6 1014 CRMSALL SECONDARY STRUCTURE . . 9.19 80 23.7 337 CRMSALL SURFACE . . . . . . . . 5.87 196 25.6 765 CRMSALL BURIED . . . . . . . . 8.10 64 25.7 249 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.764 1.000 0.500 65 95.6 68 ERRCA SECONDARY STRUCTURE . . 6.846 1.000 0.500 20 100.0 20 ERRCA SURFACE . . . . . . . . 4.529 1.000 0.500 49 96.1 51 ERRCA BURIED . . . . . . . . 5.485 1.000 0.500 16 94.1 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.872 1.000 0.500 260 77.4 336 ERRMC SECONDARY STRUCTURE . . 6.892 1.000 0.500 80 80.0 100 ERRMC SURFACE . . . . . . . . 4.576 1.000 0.500 196 77.8 252 ERRMC BURIED . . . . . . . . 5.779 1.000 0.500 64 76.2 84 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 742 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 700 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 257 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 561 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 181 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.872 1.000 0.500 260 25.6 1014 ERRALL SECONDARY STRUCTURE . . 6.892 1.000 0.500 80 23.7 337 ERRALL SURFACE . . . . . . . . 4.576 1.000 0.500 196 25.6 765 ERRALL BURIED . . . . . . . . 5.779 1.000 0.500 64 25.7 249 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 18 29 43 56 65 68 DISTCA CA (P) 7.35 26.47 42.65 63.24 82.35 68 DISTCA CA (RMS) 0.83 1.38 1.89 2.66 4.01 DISTCA ALL (N) 20 66 115 170 224 260 1014 DISTALL ALL (P) 1.97 6.51 11.34 16.77 22.09 1014 DISTALL ALL (RMS) 0.87 1.34 1.90 2.71 4.14 DISTALL END of the results output