####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 43 ( 353), selected 43 , name T0538TS228_1-D1 # Molecule2: number of CA atoms 53 ( 877), selected 43 , name T0538-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0538TS228_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 16 - 39 4.93 19.67 LONGEST_CONTINUOUS_SEGMENT: 24 17 - 40 4.98 20.05 LCS_AVERAGE: 40.98 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 17 - 35 2.00 20.36 LCS_AVERAGE: 26.37 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 19 - 34 0.96 20.53 LCS_AVERAGE: 20.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 43 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 2 N 2 3 4 19 0 3 3 4 4 4 7 9 11 13 16 16 16 16 17 17 19 19 19 20 LCS_GDT L 3 L 3 3 4 19 3 3 3 4 4 4 7 7 11 12 16 16 16 16 17 18 19 19 19 20 LCS_GDT R 4 R 4 3 4 19 3 4 4 4 4 6 9 11 12 14 16 16 16 17 17 18 19 19 19 20 LCS_GDT W 5 W 5 3 13 20 3 4 4 4 7 10 13 14 15 15 16 16 17 17 17 18 19 19 20 20 LCS_GDT T 6 T 6 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 19 20 21 22 LCS_GDT S 7 S 7 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 20 21 21 22 LCS_GDT E 8 E 8 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 20 21 21 22 LCS_GDT A 9 A 9 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 20 21 21 22 LCS_GDT K 10 K 10 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 20 21 24 25 LCS_GDT T 11 T 11 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 21 21 24 24 25 LCS_GDT K 12 K 12 12 14 20 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 19 20 24 24 25 LCS_GDT L 13 L 13 12 14 23 9 10 11 12 13 13 14 15 15 16 16 17 17 18 18 21 22 24 24 25 LCS_GDT K 14 K 14 12 14 23 9 10 11 12 13 13 14 15 15 18 20 20 20 21 22 23 24 24 25 25 LCS_GDT N 15 N 15 12 14 23 4 10 11 12 13 13 14 15 15 16 16 17 20 21 22 23 24 24 25 25 LCS_GDT I 16 I 16 12 14 24 4 9 11 12 13 13 14 15 15 16 20 20 20 21 22 23 24 24 25 25 LCS_GDT P 17 P 17 12 19 24 4 5 9 14 18 18 18 18 18 20 20 22 22 22 23 23 24 24 25 25 LCS_GDT F 18 F 18 6 19 24 4 5 12 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT F 19 F 19 16 19 24 4 5 8 12 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT A 20 A 20 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT R 21 R 21 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT S 22 S 22 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT Q 23 Q 23 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT A 24 A 24 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT K 25 K 25 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT A 26 A 26 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT R 27 R 27 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT I 28 I 28 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT E 29 E 29 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT Q 30 Q 30 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT L 31 L 31 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT A 32 A 32 16 19 24 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT R 33 R 33 16 19 24 9 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT Q 34 Q 34 16 19 24 6 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT A 35 A 35 4 19 24 3 4 5 5 6 8 12 16 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT E 36 E 36 4 6 24 3 4 5 5 6 8 12 16 19 20 21 22 22 22 23 23 24 24 25 25 LCS_GDT Q 37 Q 37 4 6 24 3 4 5 5 6 8 9 12 14 19 21 22 22 22 23 23 24 24 25 25 LCS_GDT D 38 D 38 5 7 24 3 6 6 7 7 8 10 13 16 19 21 22 22 22 23 23 24 24 25 25 LCS_GDT I 39 I 39 6 7 24 3 6 6 7 7 7 7 8 10 12 14 21 22 22 23 23 23 23 25 25 LCS_GDT V 40 V 40 6 7 24 4 5 6 7 7 7 7 8 8 9 10 12 13 14 17 21 23 23 24 24 LCS_GDT T 41 T 41 6 7 12 4 6 6 7 7 7 7 8 8 9 10 11 13 14 14 17 22 22 24 24 LCS_GDT P 42 P 42 6 7 12 4 6 6 7 7 7 7 8 8 9 10 11 11 13 13 15 15 16 18 21 LCS_GDT E 43 E 43 6 7 12 4 6 6 7 7 7 7 8 8 9 10 11 11 13 13 13 14 15 17 18 LCS_GDT L 44 L 44 6 7 12 3 6 6 7 7 7 7 8 8 9 10 11 11 13 13 13 14 15 17 17 LCS_AVERAGE LCS_A: 29.34 ( 20.67 26.37 40.98 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 15 15 16 18 18 18 18 19 20 21 22 22 22 23 23 24 24 25 25 GDT PERCENT_AT 24.53 28.30 28.30 30.19 33.96 33.96 33.96 33.96 35.85 37.74 39.62 41.51 41.51 41.51 43.40 43.40 45.28 45.28 47.17 47.17 GDT RMS_LOCAL 0.28 0.47 0.47 0.98 1.38 1.38 1.38 1.38 2.32 2.46 3.76 3.95 3.95 3.95 4.41 4.41 5.01 5.01 5.27 5.27 GDT RMS_ALL_AT 20.66 20.60 20.60 20.45 20.34 20.34 20.34 20.34 20.66 20.51 20.50 20.30 20.30 20.30 20.04 20.04 19.34 19.34 19.33 19.33 # Checking swapping # possible swapping detected: E 36 E 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 2 N 2 40.408 0 0.127 1.242 41.809 0.000 0.000 LGA L 3 L 3 39.905 0 0.604 0.534 44.258 0.000 0.000 LGA R 4 R 4 39.247 0 0.603 0.972 50.781 0.000 0.000 LGA W 5 W 5 34.742 0 0.622 0.840 37.038 0.000 0.000 LGA T 6 T 6 32.908 0 0.590 1.245 34.435 0.000 0.000 LGA S 7 S 7 29.400 0 0.015 0.531 32.871 0.000 0.000 LGA E 8 E 8 29.645 0 0.017 1.063 36.825 0.000 0.000 LGA A 9 A 9 26.154 0 0.017 0.019 27.861 0.000 0.000 LGA K 10 K 10 20.952 0 0.022 0.677 23.424 0.000 0.000 LGA T 11 T 11 20.616 0 0.030 0.063 24.063 0.000 0.000 LGA K 12 K 12 20.115 0 0.020 0.888 27.818 0.000 0.000 LGA L 13 L 13 14.953 0 0.058 0.065 17.123 0.000 0.000 LGA K 14 K 14 10.942 0 0.113 1.005 13.115 0.357 0.159 LGA N 15 N 15 14.029 0 0.139 0.155 21.198 0.000 0.000 LGA I 16 I 16 10.537 0 0.574 0.543 16.231 4.286 2.143 LGA P 17 P 17 3.055 0 0.630 0.584 7.032 54.405 43.741 LGA F 18 F 18 1.946 0 0.057 0.207 5.528 70.833 51.169 LGA F 19 F 19 2.365 0 0.010 0.067 6.763 64.881 41.732 LGA A 20 A 20 1.526 0 0.282 0.293 2.419 83.929 80.095 LGA R 21 R 21 1.289 0 0.011 1.002 3.484 81.429 81.126 LGA S 22 S 22 1.281 0 0.023 0.645 3.177 81.429 76.190 LGA Q 23 Q 23 1.136 0 0.043 0.280 1.231 81.429 84.444 LGA A 24 A 24 1.169 0 0.013 0.014 1.198 81.429 81.429 LGA K 25 K 25 1.017 0 0.052 0.581 2.092 85.952 84.603 LGA A 26 A 26 0.783 0 0.007 0.011 0.868 90.476 90.476 LGA R 27 R 27 0.364 0 0.030 1.455 8.546 97.619 60.866 LGA I 28 I 28 0.631 0 0.044 0.093 2.042 97.619 86.369 LGA E 29 E 29 0.410 0 0.035 0.089 0.627 97.619 96.825 LGA Q 30 Q 30 0.464 0 0.029 1.183 4.864 95.238 76.825 LGA L 31 L 31 0.730 0 0.000 1.403 3.961 90.476 78.155 LGA A 32 A 32 0.582 0 0.093 0.092 0.999 90.476 90.476 LGA R 33 R 33 1.193 0 0.113 1.253 7.834 81.548 53.593 LGA Q 34 Q 34 1.610 0 0.359 0.748 7.362 63.571 46.138 LGA A 35 A 35 7.175 0 0.660 0.598 9.911 12.738 10.286 LGA E 36 E 36 8.181 0 0.335 1.313 12.486 4.524 8.571 LGA Q 37 Q 37 14.578 0 0.095 0.935 19.111 0.000 0.000 LGA D 38 D 38 17.179 0 0.707 0.631 20.876 0.000 0.000 LGA I 39 I 39 23.243 0 0.039 0.096 27.549 0.000 0.000 LGA V 40 V 40 25.570 0 0.122 0.206 29.964 0.000 0.000 LGA T 41 T 41 32.170 0 0.013 0.065 33.153 0.000 0.000 LGA P 42 P 42 36.651 0 0.065 0.127 40.145 0.000 0.000 LGA E 43 E 43 36.104 0 0.096 0.684 41.137 0.000 0.000 LGA L 44 L 44 29.139 0 0.604 1.184 31.603 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 43 172 172 100.00 352 352 100.00 53 SUMMARY(RMSD_GDC): 16.450 16.168 17.498 28.533 25.008 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 43 53 4.0 18 1.38 33.962 32.784 1.213 LGA_LOCAL RMSD: 1.384 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.339 Number of assigned atoms: 43 Std_ASGN_ATOMS RMSD: 16.450 Standard rmsd on all 43 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.796895 * X + 0.136992 * Y + 0.588381 * Z + 50.946056 Y_new = 0.134567 * X + 0.909228 * Y + -0.393950 * Z + -29.645452 Z_new = -0.588940 * X + 0.393113 * Y + 0.706124 * Z + -23.941954 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.167286 0.629747 0.507987 [DEG: 9.5848 36.0818 29.1055 ] ZXZ: 0.980801 0.786787 -0.982222 [DEG: 56.1957 45.0796 -56.2772 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0538TS228_1-D1 REMARK 2: T0538-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0538TS228_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 43 53 4.0 18 1.38 32.784 16.45 REMARK ---------------------------------------------------------- MOLECULE T0538TS228_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0538 REMARK MODEL 1 REMARK PARENT 2kru_A ATOM 9 N ASN 2 22.533 -9.588 -25.372 1.00 0.00 N ATOM 10 CA ASN 2 22.046 -9.275 -26.716 1.00 0.00 C ATOM 11 C ASN 2 21.166 -8.034 -26.607 1.00 0.00 C ATOM 12 O ASN 2 20.262 -7.997 -25.781 1.00 0.00 O ATOM 13 CB ASN 2 21.240 -10.469 -27.232 1.00 0.00 C ATOM 14 CG ASN 2 20.798 -10.324 -28.667 1.00 0.00 C ATOM 15 OD1 ASN 2 20.350 -9.271 -29.109 1.00 0.00 O ATOM 16 ND2 ASN 2 20.905 -11.385 -29.408 1.00 0.00 N ATOM 17 N LEU 3 21.432 -7.018 -27.415 1.00 0.00 N ATOM 18 CA LEU 3 20.811 -5.705 -27.242 1.00 0.00 C ATOM 19 C LEU 3 19.296 -5.760 -27.386 1.00 0.00 C ATOM 20 O LEU 3 18.567 -5.054 -26.688 1.00 0.00 O ATOM 21 CB LEU 3 21.369 -4.740 -28.296 1.00 0.00 C ATOM 22 CG LEU 3 22.891 -4.532 -28.352 1.00 0.00 C ATOM 23 CD1 LEU 3 23.252 -3.799 -29.638 1.00 0.00 C ATOM 24 CD2 LEU 3 23.414 -3.763 -27.140 1.00 0.00 C ATOM 25 N ARG 4 18.832 -6.648 -28.255 1.00 0.00 N ATOM 26 CA ARG 4 17.405 -6.837 -28.517 1.00 0.00 C ATOM 27 C ARG 4 16.691 -7.437 -27.320 1.00 0.00 C ATOM 28 O ARG 4 15.489 -7.260 -27.127 1.00 0.00 O ATOM 29 CB ARG 4 17.231 -7.799 -29.692 1.00 0.00 C ATOM 30 CG ARG 4 17.850 -7.330 -31.000 1.00 0.00 C ATOM 31 CD ARG 4 17.728 -8.417 -32.051 1.00 0.00 C ATOM 32 NE ARG 4 18.308 -7.983 -33.329 1.00 0.00 N ATOM 33 CZ ARG 4 18.397 -8.699 -34.440 1.00 0.00 C ATOM 34 NH1 ARG 4 18.912 -8.146 -35.500 1.00 0.00 N ATOM 35 NH2 ARG 4 18.001 -9.938 -34.535 1.00 0.00 N ATOM 36 N TRP 5 17.434 -8.202 -26.539 1.00 0.00 N ATOM 37 CA TRP 5 16.869 -8.911 -25.399 1.00 0.00 C ATOM 38 C TRP 5 17.018 -8.045 -24.155 1.00 0.00 C ATOM 39 O TRP 5 16.220 -8.141 -23.228 1.00 0.00 O ATOM 40 CB TRP 5 17.572 -10.260 -25.219 1.00 0.00 C ATOM 41 CG TRP 5 17.496 -11.161 -26.440 1.00 0.00 C ATOM 42 CD1 TRP 5 16.684 -11.032 -27.530 1.00 0.00 C ATOM 43 CD2 TRP 5 18.280 -12.340 -26.699 1.00 0.00 C ATOM 44 NE1 TRP 5 16.951 -11.981 -28.475 1.00 0.00 N ATOM 45 CE2 TRP 5 17.956 -12.784 -28.014 1.00 0.00 C ATOM 46 CE3 TRP 5 19.260 -13.045 -25.968 1.00 0.00 C ATOM 47 CZ2 TRP 5 18.606 -13.877 -28.622 1.00 0.00 C ATOM 48 CZ3 TRP 5 19.911 -14.151 -26.574 1.00 0.00 C ATOM 49 CH2 TRP 5 19.579 -14.547 -27.902 1.00 0.00 C ATOM 50 N THR 6 18.004 -7.160 -24.145 1.00 50.72 N ATOM 51 CA THR 6 18.156 -6.194 -23.058 1.00 51.14 C ATOM 52 C THR 6 16.965 -5.245 -23.015 1.00 51.22 C ATOM 53 O THR 6 16.401 -4.983 -21.955 1.00 51.50 O ATOM 54 CB THR 6 19.440 -5.346 -23.227 1.00 0.00 C ATOM 55 OG1 THR 6 20.571 -6.205 -23.388 1.00 0.00 O ATOM 56 CG2 THR 6 19.710 -4.485 -22.015 1.00 0.00 C ATOM 57 N SER 7 16.547 -4.744 -24.167 1.00 51.21 N ATOM 58 CA SER 7 15.406 -3.837 -24.216 1.00 51.17 C ATOM 59 C SER 7 14.126 -4.564 -23.846 1.00 50.56 C ATOM 60 O SER 7 13.293 -4.047 -23.112 1.00 50.09 O ATOM 61 CB SER 7 15.277 -3.324 -25.639 1.00 0.00 C ATOM 62 OG SER 7 15.649 -4.369 -26.517 1.00 0.00 O ATOM 63 N GLU 8 13.985 -5.794 -24.313 1.00 50.18 N ATOM 64 CA GLU 8 12.798 -6.580 -24.000 1.00 49.54 C ATOM 65 C GLU 8 12.733 -6.897 -22.506 1.00 49.27 C ATOM 66 O GLU 8 11.660 -6.900 -21.909 1.00 49.37 O ATOM 67 CB GLU 8 12.782 -7.850 -24.847 1.00 0.00 C ATOM 68 CG GLU 8 11.440 -8.553 -24.830 1.00 0.00 C ATOM 69 CD GLU 8 11.387 -9.721 -25.791 1.00 0.00 C ATOM 70 OE1 GLU 8 11.740 -9.563 -26.984 1.00 0.00 O ATOM 71 OE2 GLU 8 10.975 -10.825 -25.378 1.00 0.00 O ATOM 72 N ALA 9 13.881 -7.077 -21.869 1.00 49.11 N ATOM 73 CA ALA 9 13.914 -7.262 -20.425 1.00 48.62 C ATOM 74 C ALA 9 13.443 -6.000 -19.702 1.00 48.22 C ATOM 75 O ALA 9 12.730 -6.103 -18.716 1.00 48.41 O ATOM 76 CB ALA 9 15.313 -7.650 -19.965 1.00 48.57 C ATOM 77 N LYS 10 13.788 -4.815 -20.196 1.00 47.62 N ATOM 78 CA LYS 10 13.289 -3.573 -19.586 1.00 47.20 C ATOM 79 C LYS 10 11.777 -3.498 -19.731 1.00 46.59 C ATOM 80 O LYS 10 11.070 -3.127 -18.794 1.00 46.78 O ATOM 81 CB LYS 10 13.886 -2.325 -20.247 1.00 0.00 C ATOM 82 CG LYS 10 15.378 -2.148 -20.057 1.00 0.00 C ATOM 83 CD LYS 10 15.855 -0.890 -20.762 1.00 0.00 C ATOM 84 CE LYS 10 17.365 -0.792 -20.693 1.00 0.00 C ATOM 85 NZ LYS 10 17.875 0.464 -21.324 1.00 0.00 N ATOM 86 N THR 11 11.282 -3.865 -20.901 1.00 45.53 N ATOM 87 CA THR 11 9.847 -3.867 -21.170 1.00 44.75 C ATOM 88 C THR 11 9.116 -4.828 -20.239 1.00 44.95 C ATOM 89 O THR 11 8.100 -4.484 -19.636 1.00 45.27 O ATOM 90 CB THR 11 9.616 -4.259 -22.648 1.00 0.00 C ATOM 91 OG1 THR 11 10.394 -3.379 -23.461 1.00 0.00 O ATOM 92 CG2 THR 11 8.182 -4.119 -23.080 1.00 0.00 C ATOM 93 N LYS 12 9.642 -6.032 -20.076 1.00 44.62 N ATOM 94 CA LYS 12 9.025 -7.026 -19.197 1.00 44.28 C ATOM 95 C LYS 12 9.137 -6.630 -17.731 1.00 44.34 C ATOM 96 O LYS 12 8.170 -6.760 -16.984 1.00 44.35 O ATOM 97 CB LYS 12 9.653 -8.394 -19.475 1.00 0.00 C ATOM 98 CG LYS 12 9.174 -8.947 -20.814 1.00 0.00 C ATOM 99 CD LYS 12 9.816 -10.265 -21.220 1.00 0.00 C ATOM 100 CE LYS 12 9.111 -10.762 -22.479 1.00 0.00 C ATOM 101 NZ LYS 12 9.658 -12.015 -23.076 1.00 0.00 N ATOM 102 N LEU 13 10.271 -6.083 -17.323 1.00 44.19 N ATOM 103 CA LEU 13 10.445 -5.637 -15.944 1.00 44.47 C ATOM 104 C LEU 13 9.569 -4.434 -15.609 1.00 44.65 C ATOM 105 O LEU 13 9.230 -4.227 -14.452 1.00 44.66 O ATOM 106 CB LEU 13 11.916 -5.320 -15.651 1.00 0.00 C ATOM 107 CG LEU 13 12.308 -5.069 -14.182 1.00 0.00 C ATOM 108 CD1 LEU 13 11.928 -6.227 -13.250 1.00 0.00 C ATOM 109 CD2 LEU 13 13.805 -4.820 -14.074 1.00 0.00 C ATOM 110 N LYS 14 9.141 -3.657 -16.593 1.00 44.33 N ATOM 111 CA LYS 14 8.077 -2.683 -16.341 1.00 43.93 C ATOM 112 C LYS 14 6.721 -3.375 -16.251 1.00 43.25 C ATOM 113 O LYS 14 5.970 -3.181 -15.295 1.00 43.19 O ATOM 114 CB LYS 14 8.055 -1.608 -17.435 1.00 0.00 C ATOM 115 CG LYS 14 6.999 -0.538 -17.190 1.00 0.00 C ATOM 116 CD LYS 14 7.074 0.571 -18.217 1.00 0.00 C ATOM 117 CE LYS 14 5.988 1.604 -17.956 1.00 0.00 C ATOM 118 NZ LYS 14 6.070 2.717 -18.942 1.00 0.00 N ATOM 119 N ASN 15 6.395 -4.149 -17.274 1.00 42.35 N ATOM 120 CA ASN 15 5.032 -4.635 -17.464 1.00 42.10 C ATOM 121 C ASN 15 4.546 -5.635 -16.421 1.00 42.12 C ATOM 122 O ASN 15 3.394 -5.565 -15.994 1.00 41.83 O ATOM 123 CB ASN 15 4.880 -5.298 -18.841 1.00 0.00 C ATOM 124 CG ASN 15 4.999 -4.325 -19.990 1.00 0.00 C ATOM 125 OD1 ASN 15 5.066 -3.115 -19.820 1.00 0.00 O ATOM 126 ND2 ASN 15 5.011 -4.851 -21.183 1.00 0.00 N ATOM 127 N ILE 16 5.389 -6.580 -16.029 1.00 42.26 N ATOM 128 CA ILE 16 4.951 -7.667 -15.149 1.00 42.35 C ATOM 129 C ILE 16 4.691 -7.195 -13.705 1.00 42.90 C ATOM 130 O ILE 16 3.575 -7.381 -13.195 1.00 43.03 O ATOM 131 CB ILE 16 5.953 -8.873 -15.167 1.00 0.00 C ATOM 132 CG1 ILE 16 6.189 -9.400 -16.597 1.00 0.00 C ATOM 133 CG2 ILE 16 5.448 -10.024 -14.275 1.00 0.00 C ATOM 134 CD1 ILE 16 7.459 -10.250 -16.740 1.00 0.00 C ATOM 135 N PRO 17 5.672 -6.563 -13.021 1.00 43.50 N ATOM 136 CA PRO 17 5.328 -6.192 -11.643 1.00 43.81 C ATOM 137 C PRO 17 4.440 -4.961 -11.512 1.00 44.37 C ATOM 138 O PRO 17 4.079 -4.599 -10.400 1.00 44.39 O ATOM 139 CB PRO 17 6.695 -5.938 -11.009 1.00 0.00 C ATOM 140 CG PRO 17 7.465 -5.371 -12.098 1.00 0.00 C ATOM 141 CD PRO 17 7.071 -6.188 -13.301 1.00 0.00 C ATOM 142 N PHE 18 4.025 -4.342 -12.612 1.00 44.70 N ATOM 143 CA PHE 18 3.041 -3.262 -12.533 1.00 45.13 C ATOM 144 C PHE 18 1.788 -3.743 -11.819 1.00 44.68 C ATOM 145 O PHE 18 1.276 -3.060 -10.944 1.00 44.89 O ATOM 146 CB PHE 18 2.636 -2.772 -13.924 1.00 0.00 C ATOM 147 CG PHE 18 1.426 -1.875 -13.903 1.00 0.00 C ATOM 148 CD1 PHE 18 1.519 -0.556 -13.434 1.00 0.00 C ATOM 149 CD2 PHE 18 0.166 -2.378 -14.289 1.00 0.00 C ATOM 150 CE1 PHE 18 0.366 0.256 -13.319 1.00 0.00 C ATOM 151 CE2 PHE 18 -0.998 -1.577 -14.187 1.00 0.00 C ATOM 152 CZ PHE 18 -0.897 -0.256 -13.696 1.00 0.00 C ATOM 153 N PHE 19 1.332 -4.940 -12.154 1.00 44.21 N ATOM 154 CA PHE 19 0.104 -5.461 -11.564 1.00 44.09 C ATOM 155 C PHE 19 0.267 -5.771 -10.080 1.00 44.52 C ATOM 156 O PHE 19 -0.665 -5.642 -9.293 1.00 44.37 O ATOM 157 CB PHE 19 -0.331 -6.700 -12.338 1.00 0.00 C ATOM 158 CG PHE 19 -0.554 -6.426 -13.798 1.00 0.00 C ATOM 159 CD1 PHE 19 0.389 -6.834 -14.759 1.00 0.00 C ATOM 160 CD2 PHE 19 -1.704 -5.733 -14.217 1.00 0.00 C ATOM 161 CE1 PHE 19 0.184 -6.565 -16.133 1.00 0.00 C ATOM 162 CE2 PHE 19 -1.921 -5.451 -15.587 1.00 0.00 C ATOM 163 CZ PHE 19 -0.974 -5.868 -16.547 1.00 0.00 C ATOM 164 N ALA 20 1.478 -6.132 -9.684 1.00 44.90 N ATOM 165 CA ALA 20 1.764 -6.353 -8.274 1.00 45.43 C ATOM 166 C ALA 20 1.715 -5.015 -7.529 1.00 46.08 C ATOM 167 O ALA 20 1.165 -4.924 -6.428 1.00 46.29 O ATOM 168 CB ALA 20 3.136 -7.018 -8.120 1.00 45.03 C ATOM 169 N ARG 21 2.277 -3.968 -8.122 1.00 46.76 N ATOM 170 CA ARG 21 2.261 -2.649 -7.485 1.00 47.55 C ATOM 171 C ARG 21 0.853 -2.095 -7.398 1.00 48.19 C ATOM 172 O ARG 21 0.474 -1.571 -6.359 1.00 48.04 O ATOM 173 CB ARG 21 3.104 -1.625 -8.251 1.00 0.00 C ATOM 174 CG ARG 21 4.601 -1.875 -8.241 1.00 0.00 C ATOM 175 CD ARG 21 5.335 -0.670 -8.822 1.00 0.00 C ATOM 176 NE ARG 21 5.023 -0.407 -10.238 1.00 0.00 N ATOM 177 CZ ARG 21 5.666 -0.893 -11.290 1.00 0.00 C ATOM 178 NH1 ARG 21 5.350 -0.473 -12.479 1.00 0.00 N ATOM 179 NH2 ARG 21 6.629 -1.769 -11.206 1.00 0.00 N ATOM 180 N SER 22 0.084 -2.191 -8.470 1.00 49.16 N ATOM 181 CA SER 22 -1.260 -1.623 -8.489 1.00 50.69 C ATOM 182 C SER 22 -2.186 -2.365 -7.537 1.00 50.95 C ATOM 183 O SER 22 -2.965 -1.730 -6.834 1.00 50.86 O ATOM 184 CB SER 22 -1.825 -1.663 -9.906 1.00 0.00 C ATOM 185 OG SER 22 -1.762 -2.985 -10.400 1.00 0.00 O ATOM 186 N GLN 23 -2.078 -3.685 -7.444 1.00 51.33 N ATOM 187 CA GLN 23 -2.903 -4.419 -6.489 1.00 51.58 C ATOM 188 C GLN 23 -2.523 -4.062 -5.060 1.00 52.05 C ATOM 189 O GLN 23 -3.394 -3.876 -4.217 1.00 52.24 O ATOM 190 CB GLN 23 -2.763 -5.933 -6.670 1.00 0.00 C ATOM 191 CG GLN 23 -3.748 -6.750 -5.821 1.00 0.00 C ATOM 192 CD GLN 23 -5.189 -6.529 -6.233 1.00 0.00 C ATOM 193 OE1 GLN 23 -5.557 -6.801 -7.371 1.00 0.00 O ATOM 194 NE2 GLN 23 -6.010 -6.049 -5.342 1.00 0.00 N ATOM 195 N ALA 24 -1.232 -3.955 -4.782 1.00 52.28 N ATOM 196 CA ALA 24 -0.800 -3.620 -3.432 1.00 52.73 C ATOM 197 C ALA 24 -1.259 -2.207 -3.078 1.00 53.74 C ATOM 198 O ALA 24 -1.742 -1.973 -1.978 1.00 53.64 O ATOM 199 CB ALA 24 0.718 -3.757 -3.312 1.00 52.56 C ATOM 200 N LYS 25 -1.162 -1.285 -4.026 1.00 54.95 N ATOM 201 CA LYS 25 -1.631 0.081 -3.812 1.00 56.30 C ATOM 202 C LYS 25 -3.121 0.077 -3.510 1.00 56.68 C ATOM 203 O LYS 25 -3.525 0.630 -2.497 1.00 56.63 O ATOM 204 CB LYS 25 -1.347 0.944 -5.050 1.00 0.00 C ATOM 205 CG LYS 25 -1.818 2.381 -4.909 1.00 0.00 C ATOM 206 CD LYS 25 -1.651 3.173 -6.195 1.00 0.00 C ATOM 207 CE LYS 25 -2.192 4.583 -5.990 1.00 0.00 C ATOM 208 NZ LYS 25 -2.190 5.432 -7.221 1.00 0.00 N ATOM 209 N ALA 26 -3.922 -0.582 -4.335 1.00 57.44 N ATOM 210 CA ALA 26 -5.366 -0.606 -4.130 1.00 58.46 C ATOM 211 C ALA 26 -5.722 -1.238 -2.785 1.00 58.26 C ATOM 212 O ALA 26 -6.579 -0.741 -2.062 1.00 57.89 O ATOM 213 CB ALA 26 -6.040 -1.363 -5.281 1.00 59.15 C ATOM 214 N ARG 27 -5.037 -2.312 -2.419 1.00 58.54 N ATOM 215 CA ARG 27 -5.290 -2.960 -1.133 1.00 59.03 C ATOM 216 C ARG 27 -4.954 -2.033 0.026 1.00 59.01 C ATOM 217 O ARG 27 -5.724 -1.940 0.971 1.00 59.19 O ATOM 218 CB ARG 27 -4.490 -4.255 -1.000 1.00 0.00 C ATOM 219 CG ARG 27 -4.880 -5.063 0.235 1.00 0.00 C ATOM 220 CD ARG 27 -4.032 -6.307 0.428 1.00 0.00 C ATOM 221 NE ARG 27 -2.618 -5.977 0.645 1.00 0.00 N ATOM 222 CZ ARG 27 -2.047 -5.611 1.783 1.00 0.00 C ATOM 223 NH1 ARG 27 -0.765 -5.390 1.775 1.00 0.00 N ATOM 224 NH2 ARG 27 -2.681 -5.446 2.914 1.00 0.00 N ATOM 225 N ILE 28 -3.827 -1.340 -0.031 1.00 58.85 N ATOM 226 CA ILE 28 -3.437 -0.433 1.051 1.00 58.64 C ATOM 227 C ILE 28 -4.417 0.736 1.098 1.00 59.10 C ATOM 228 O ILE 28 -4.824 1.148 2.175 1.00 59.17 O ATOM 229 CB ILE 28 -1.963 0.057 0.893 1.00 0.00 C ATOM 230 CG1 ILE 28 -1.010 -1.141 1.085 1.00 0.00 C ATOM 231 CG2 ILE 28 -1.613 1.178 1.914 1.00 0.00 C ATOM 232 CD1 ILE 28 0.439 -0.911 0.639 1.00 0.00 C ATOM 233 N GLU 29 -4.850 1.246 -0.042 1.00 59.53 N ATOM 234 CA GLU 29 -5.802 2.356 -0.065 1.00 60.23 C ATOM 235 C GLU 29 -7.168 1.942 0.478 1.00 61.19 C ATOM 236 O GLU 29 -7.807 2.717 1.183 1.00 61.26 O ATOM 237 CB GLU 29 -5.920 2.906 -1.485 1.00 0.00 C ATOM 238 CG GLU 29 -4.675 3.683 -1.901 1.00 0.00 C ATOM 239 CD GLU 29 -4.741 4.198 -3.323 1.00 0.00 C ATOM 240 OE1 GLU 29 -5.135 3.452 -4.243 1.00 0.00 O ATOM 241 OE2 GLU 29 -4.343 5.363 -3.549 1.00 0.00 O ATOM 242 N GLN 30 -7.608 0.718 0.230 1.00 62.55 N ATOM 243 CA GLN 30 -8.840 0.214 0.841 1.00 63.68 C ATOM 244 C GLN 30 -8.677 -0.075 2.332 1.00 64.29 C ATOM 245 O GLN 30 -9.563 0.226 3.140 1.00 64.47 O ATOM 246 CB GLN 30 -9.290 -1.066 0.131 1.00 0.00 C ATOM 247 CG GLN 30 -9.914 -0.813 -1.240 1.00 0.00 C ATOM 248 CD GLN 30 -11.182 0.018 -1.150 1.00 0.00 C ATOM 249 OE1 GLN 30 -11.955 -0.096 -0.200 1.00 0.00 O ATOM 250 NE2 GLN 30 -11.419 0.842 -2.123 1.00 0.00 N ATOM 251 N LEU 31 -7.528 -0.607 2.717 1.00 65.12 N ATOM 252 CA LEU 31 -7.225 -0.880 4.121 1.00 66.12 C ATOM 253 C LEU 31 -7.202 0.422 4.917 1.00 66.85 C ATOM 254 O LEU 31 -7.672 0.485 6.051 1.00 67.25 O ATOM 255 CB LEU 31 -5.868 -1.591 4.221 1.00 0.00 C ATOM 256 CG LEU 31 -5.331 -1.973 5.605 1.00 0.00 C ATOM 257 CD1 LEU 31 -6.242 -2.955 6.321 1.00 0.00 C ATOM 258 CD2 LEU 31 -3.942 -2.571 5.444 1.00 0.00 C ATOM 259 N ALA 32 -6.682 1.469 4.294 1.00 67.71 N ATOM 260 CA ALA 32 -6.636 2.802 4.876 1.00 68.47 C ATOM 261 C ALA 32 -7.967 3.565 4.760 1.00 69.45 C ATOM 262 O ALA 32 -8.203 4.503 5.521 1.00 69.61 O ATOM 263 CB ALA 32 -5.515 3.590 4.200 1.00 68.01 C ATOM 264 N ARG 33 -8.835 3.179 3.830 1.00 70.75 N ATOM 265 CA ARG 33 -10.171 3.781 3.713 1.00 72.17 C ATOM 266 C ARG 33 -10.934 3.458 4.981 1.00 72.82 C ATOM 267 O ARG 33 -11.558 4.335 5.567 1.00 72.97 O ATOM 268 CB ARG 33 -10.934 3.251 2.490 1.00 0.00 C ATOM 269 CG ARG 33 -12.291 3.916 2.259 1.00 0.00 C ATOM 270 CD ARG 33 -13.019 3.327 1.056 1.00 0.00 C ATOM 271 NE ARG 33 -13.390 1.918 1.255 1.00 0.00 N ATOM 272 CZ ARG 33 -14.484 1.461 1.848 1.00 0.00 C ATOM 273 NH1 ARG 33 -14.639 0.180 1.993 1.00 0.00 N ATOM 274 NH2 ARG 33 -15.434 2.214 2.321 1.00 0.00 N ATOM 275 N GLN 34 -10.795 2.212 5.416 1.00 0.00 N ATOM 276 CA GLN 34 -11.128 1.790 6.777 1.00 0.00 C ATOM 277 C GLN 34 -12.507 2.223 7.281 1.00 0.00 C ATOM 278 O GLN 34 -12.654 2.718 8.398 1.00 0.00 O ATOM 279 CB GLN 34 -10.010 2.297 7.693 1.00 0.00 C ATOM 280 CG GLN 34 -9.756 1.454 8.929 1.00 0.00 C ATOM 281 CD GLN 34 -8.427 1.786 9.554 1.00 0.00 C ATOM 282 OE1 GLN 34 -8.343 2.392 10.620 1.00 0.00 O ATOM 283 NE2 GLN 34 -7.366 1.418 8.887 1.00 0.00 N ATOM 284 N ALA 35 -13.520 2.085 6.438 1.00 0.00 N ATOM 285 CA ALA 35 -14.865 2.478 6.832 1.00 0.00 C ATOM 286 C ALA 35 -15.298 1.547 7.959 1.00 0.00 C ATOM 287 O ALA 35 -15.017 0.349 7.915 1.00 0.00 O ATOM 288 CB ALA 35 -15.819 2.376 5.652 1.00 0.00 C ATOM 289 N GLU 36 -15.991 2.068 8.954 1.00 0.00 N ATOM 290 CA GLU 36 -16.559 1.215 9.989 1.00 0.00 C ATOM 291 C GLU 36 -17.805 0.576 9.403 1.00 0.00 C ATOM 292 O GLU 36 -18.206 -0.519 9.792 1.00 0.00 O ATOM 293 CB GLU 36 -16.972 2.022 11.214 1.00 0.00 C ATOM 294 CG GLU 36 -15.814 2.638 11.972 1.00 0.00 C ATOM 295 CD GLU 36 -16.283 3.374 13.213 1.00 0.00 C ATOM 296 OE1 GLU 36 -17.473 3.254 13.596 1.00 0.00 O ATOM 297 OE2 GLU 36 -15.466 4.111 13.807 1.00 0.00 O ATOM 298 N GLN 37 -18.427 1.287 8.474 1.00 0.00 N ATOM 299 CA GLN 37 -19.680 0.862 7.863 1.00 0.00 C ATOM 300 C GLN 37 -19.643 1.065 6.350 1.00 0.00 C ATOM 301 O GLN 37 -19.385 2.169 5.872 1.00 0.00 O ATOM 302 CB GLN 37 -20.820 1.704 8.446 1.00 0.00 C ATOM 303 CG GLN 37 -21.039 1.565 9.956 1.00 0.00 C ATOM 304 CD GLN 37 -22.023 2.585 10.484 1.00 0.00 C ATOM 305 OE1 GLN 37 -22.831 3.133 9.740 1.00 0.00 O ATOM 306 NE2 GLN 37 -21.949 2.875 11.752 1.00 0.00 N ATOM 307 N ASP 38 -19.947 0.013 5.610 1.00 0.00 N ATOM 308 CA ASP 38 -20.199 0.087 4.170 1.00 0.00 C ATOM 309 C ASP 38 -21.697 -0.173 4.062 1.00 0.00 C ATOM 310 O ASP 38 -22.252 -0.870 4.920 1.00 0.00 O ATOM 311 CB ASP 38 -19.463 -1.015 3.398 1.00 0.00 C ATOM 312 CG ASP 38 -17.972 -0.763 3.255 1.00 0.00 C ATOM 313 OD1 ASP 38 -17.553 0.360 2.897 1.00 0.00 O ATOM 314 OD2 ASP 38 -17.192 -1.738 3.401 1.00 0.00 O ATOM 315 N ILE 39 -22.358 0.351 3.040 1.00 0.00 N ATOM 316 CA ILE 39 -23.791 0.129 2.819 1.00 0.00 C ATOM 317 C ILE 39 -23.966 -0.310 1.364 1.00 0.00 C ATOM 318 O ILE 39 -23.371 0.290 0.458 1.00 0.00 O ATOM 319 CB ILE 39 -24.619 1.426 3.112 1.00 0.00 C ATOM 320 CG1 ILE 39 -24.412 1.868 4.577 1.00 0.00 C ATOM 321 CG2 ILE 39 -26.131 1.205 2.818 1.00 0.00 C ATOM 322 CD1 ILE 39 -25.024 3.216 4.962 1.00 0.00 C ATOM 323 N VAL 40 -24.773 -1.332 1.127 1.00 0.00 N ATOM 324 CA VAL 40 -25.091 -1.818 -0.219 1.00 0.00 C ATOM 325 C VAL 40 -26.607 -1.820 -0.405 1.00 0.00 C ATOM 326 O VAL 40 -27.357 -1.683 0.565 1.00 0.00 O ATOM 327 CB VAL 40 -24.519 -3.244 -0.476 1.00 0.00 C ATOM 328 CG1 VAL 40 -22.985 -3.227 -0.461 1.00 0.00 C ATOM 329 CG2 VAL 40 -25.032 -4.260 0.540 1.00 0.00 C ATOM 330 N THR 41 -27.055 -1.966 -1.642 1.00 0.00 N ATOM 331 CA THR 41 -28.479 -2.022 -1.964 1.00 0.00 C ATOM 332 C THR 41 -29.054 -3.355 -1.477 1.00 0.00 C ATOM 333 O THR 41 -28.302 -4.321 -1.298 1.00 0.00 O ATOM 334 CB THR 41 -28.664 -1.961 -3.497 1.00 0.00 C ATOM 335 OG1 THR 41 -27.927 -3.033 -4.081 1.00 0.00 O ATOM 336 CG2 THR 41 -28.123 -0.670 -4.079 1.00 0.00 C ATOM 337 N PRO 42 -30.387 -3.463 -1.307 1.00 0.00 N ATOM 338 CA PRO 42 -30.907 -4.771 -0.879 1.00 0.00 C ATOM 339 C PRO 42 -30.881 -5.837 -1.969 1.00 0.00 C ATOM 340 O PRO 42 -31.157 -7.009 -1.723 1.00 0.00 O ATOM 341 CB PRO 42 -32.345 -4.442 -0.481 1.00 0.00 C ATOM 342 CG PRO 42 -32.717 -3.354 -1.401 1.00 0.00 C ATOM 343 CD PRO 42 -31.490 -2.490 -1.453 1.00 0.00 C ATOM 344 N GLU 43 -30.550 -5.439 -3.189 1.00 0.00 N ATOM 345 CA GLU 43 -30.495 -6.359 -4.318 1.00 0.00 C ATOM 346 C GLU 43 -29.283 -7.279 -4.228 1.00 0.00 C ATOM 347 O GLU 43 -29.257 -8.360 -4.828 1.00 0.00 O ATOM 348 CB GLU 43 -30.401 -5.563 -5.619 1.00 0.00 C ATOM 349 CG GLU 43 -31.531 -4.561 -5.799 1.00 0.00 C ATOM 350 CD GLU 43 -31.548 -3.943 -7.185 1.00 0.00 C ATOM 351 OE1 GLU 43 -30.479 -3.694 -7.784 1.00 0.00 O ATOM 352 OE2 GLU 43 -32.654 -3.709 -7.716 1.00 0.00 O ATOM 353 N LEU 44 -28.273 -6.829 -3.495 1.00 0.00 N ATOM 354 CA LEU 44 -26.999 -7.531 -3.384 1.00 0.00 C ATOM 355 C LEU 44 -26.966 -8.481 -2.202 1.00 0.00 C ATOM 356 O LEU 44 -27.478 -8.161 -1.114 1.00 0.00 O ATOM 357 OXT LEU 44 -26.433 -9.594 -2.394 1.00 0.00 O ATOM 358 CB LEU 44 -25.865 -6.500 -3.299 1.00 0.00 C ATOM 359 CG LEU 44 -25.665 -5.647 -4.564 1.00 0.00 C ATOM 360 CD1 LEU 44 -24.687 -4.524 -4.288 1.00 0.00 C ATOM 361 CD2 LEU 44 -25.158 -6.477 -5.738 1.00 0.00 C TER 362 LEU 44 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 352 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 53.93 78.6 84 80.8 104 ARMSMC SECONDARY STRUCTURE . . 22.69 92.7 55 74.3 74 ARMSMC SURFACE . . . . . . . . 53.23 78.0 59 79.7 74 ARMSMC BURIED . . . . . . . . 55.54 80.0 25 83.3 30 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.06 67.6 37 82.2 45 ARMSSC1 RELIABLE SIDE CHAINS . 63.90 66.7 36 83.7 43 ARMSSC1 SECONDARY STRUCTURE . . 66.84 65.2 23 76.7 30 ARMSSC1 SURFACE . . . . . . . . 70.09 59.3 27 79.4 34 ARMSSC1 BURIED . . . . . . . . 38.10 90.0 10 90.9 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.00 61.3 31 81.6 38 ARMSSC2 RELIABLE SIDE CHAINS . 61.26 64.0 25 80.6 31 ARMSSC2 SECONDARY STRUCTURE . . 66.45 65.0 20 76.9 26 ARMSSC2 SURFACE . . . . . . . . 63.36 59.1 22 75.9 29 ARMSSC2 BURIED . . . . . . . . 58.52 66.7 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.44 37.5 16 76.2 21 ARMSSC3 RELIABLE SIDE CHAINS . 72.23 50.0 12 80.0 15 ARMSSC3 SECONDARY STRUCTURE . . 78.09 38.5 13 76.5 17 ARMSSC3 SURFACE . . . . . . . . 83.07 33.3 15 75.0 20 ARMSSC3 BURIED . . . . . . . . 5.68 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.21 25.0 8 88.9 9 ARMSSC4 RELIABLE SIDE CHAINS . 91.21 25.0 8 88.9 9 ARMSSC4 SECONDARY STRUCTURE . . 92.24 28.6 7 87.5 8 ARMSSC4 SURFACE . . . . . . . . 91.21 25.0 8 88.9 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 16.45 (Number of atoms: 43) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 16.45 43 81.1 53 CRMSCA CRN = ALL/NP . . . . . 0.3826 CRMSCA SECONDARY STRUCTURE . . 13.00 28 75.7 37 CRMSCA SURFACE . . . . . . . . 15.70 30 78.9 38 CRMSCA BURIED . . . . . . . . 18.06 13 86.7 15 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 16.38 215 81.4 264 CRMSMC SECONDARY STRUCTURE . . 12.98 140 76.1 184 CRMSMC SURFACE . . . . . . . . 15.61 150 79.4 189 CRMSMC BURIED . . . . . . . . 18.04 65 86.7 75 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 18.74 180 27.1 665 CRMSSC RELIABLE SIDE CHAINS . 18.54 158 24.9 635 CRMSSC SECONDARY STRUCTURE . . 14.32 116 24.8 467 CRMSSC SURFACE . . . . . . . . 17.84 132 27.2 486 CRMSSC BURIED . . . . . . . . 21.00 48 26.8 179 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 17.53 352 40.1 877 CRMSALL SECONDARY STRUCTURE . . 13.57 228 37.1 615 CRMSALL SURFACE . . . . . . . . 16.72 252 39.5 638 CRMSALL BURIED . . . . . . . . 19.42 100 41.8 239 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 34.401 0.781 0.642 43 81.1 53 ERRCA SECONDARY STRUCTURE . . 39.667 0.726 0.697 28 75.7 37 ERRCA SURFACE . . . . . . . . 32.955 0.767 0.640 30 78.9 38 ERRCA BURIED . . . . . . . . 37.738 0.811 0.646 13 86.7 15 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 31.545 0.822 0.622 215 81.4 264 ERRMC SECONDARY STRUCTURE . . 35.669 0.775 0.670 140 76.1 184 ERRMC SURFACE . . . . . . . . 29.910 0.815 0.618 150 79.4 189 ERRMC BURIED . . . . . . . . 35.318 0.839 0.632 65 86.7 75 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.555 0.989 0.505 180 27.1 665 ERRSC RELIABLE SIDE CHAINS . 17.533 0.988 0.506 158 24.9 635 ERRSC SECONDARY STRUCTURE . . 14.497 0.984 0.508 116 24.8 467 ERRSC SURFACE . . . . . . . . 16.388 0.994 0.503 132 27.2 486 ERRSC BURIED . . . . . . . . 20.767 0.976 0.511 48 26.8 179 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 25.964 0.891 0.575 352 40.1 877 ERRALL SECONDARY STRUCTURE . . 27.104 0.862 0.605 228 37.1 615 ERRALL SURFACE . . . . . . . . 24.413 0.890 0.570 252 39.5 638 ERRALL BURIED . . . . . . . . 29.871 0.895 0.586 100 41.8 239 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 2 15 43 53 DISTCA CA (P) 0.00 0.00 0.00 3.77 28.30 53 DISTCA CA (RMS) 0.00 0.00 0.00 4.41 6.80 DISTCA ALL (N) 0 0 0 17 111 352 877 DISTALL ALL (P) 0.00 0.00 0.00 1.94 12.66 877 DISTALL ALL (RMS) 0.00 0.00 0.00 4.41 7.38 DISTALL END of the results output